GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001050-TA|BGIBMGA001050-PA|undefined
         (94 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071285-1|AAL48907.1|  263|Drosophila melanogaster RE31221p pro...    36   0.007
AE013599-3491|AAF46918.2|  263|Drosophila melanogaster CG13532-P...    36   0.007
L23146-1|AAA03750.1| 1011|Drosophila melanogaster neuromusculin ...    29   0.62 
AE014296-3753|ABI31268.1| 1036|Drosophila melanogaster CG8779-PB...    29   0.62 
AE014296-3752|AAF51887.4| 1087|Drosophila melanogaster CG8779-PA...    29   0.62 
DQ138902-1|ABA86508.1| 1333|Drosophila melanogaster CG6890 protein.    29   0.83 
AY118551-1|AAM49920.1| 1346|Drosophila melanogaster LD33590p pro...    29   0.83 
AF247764-1|AAF86224.1| 1346|Drosophila melanogaster Toll-8 protein.    29   0.83 
AF204158-1|AAF18983.1| 1346|Drosophila melanogaster cell surface...    29   0.83 
AE014296-2494|AAF49650.1| 1346|Drosophila melanogaster CG6890-PA...    29   0.83 
AE013599-878|AAM71069.2| 2172|Drosophila melanogaster CG1884-PA,...    27   2.5  
AE013599-877|AAF58926.2| 2170|Drosophila melanogaster CG1884-PB,...    27   2.5  
BT025908-1|ABG02152.1|  400|Drosophila melanogaster IP05642p pro...    27   4.4  
BT022225-1|AAY54641.1|  481|Drosophila melanogaster IP12444p pro...    27   4.4  
BT012508-1|AAS93779.1|  387|Drosophila melanogaster AT17934p pro...    27   4.4  
AE014297-1088|AAF54492.1|  450|Drosophila melanogaster CG5361-PA...    27   4.4  
AE014134-2537|AAX52666.1|  867|Drosophila melanogaster CG33515-P...    27   4.4  
AE013599-771|AAF58999.1|  387|Drosophila melanogaster CG8197-PA ...    27   4.4  
AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,...    26   7.7  

>AY071285-1|AAL48907.1|  263|Drosophila melanogaster RE31221p
           protein.
          Length = 263

 Score = 35.9 bits (79), Expect = 0.007
 Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 1   MIQDRLDEDYLNIICAVEGVYPKPELNILVGNRLLIDTKSSINL-IDGRYTALTTAVVNV 59
           M   R+D D   I+CAV+ V+P+P L+++    +L    + ++    G Y+      +  
Sbjct: 152 MSGSRMDVD---IMCAVQHVFPQPMLSVMFDTHILDSVLTQLDQDPSGLYSMTVRTRIPR 208

Query: 60  NSLPTTVELLCEMQVPLANYYSKKRDLFY 88
           + L +   + C   +   NY  ++  +FY
Sbjct: 209 DQLESPTPITCAFILVGTNYTKRRETIFY 237


>AE013599-3491|AAF46918.2|  263|Drosophila melanogaster CG13532-PA
           protein.
          Length = 263

 Score = 35.9 bits (79), Expect = 0.007
 Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 1   MIQDRLDEDYLNIICAVEGVYPKPELNILVGNRLLIDTKSSINL-IDGRYTALTTAVVNV 59
           M   R+D D   I+CAV+ V+P+P L+++    +L    + ++    G Y+      +  
Sbjct: 152 MSGSRMDVD---IMCAVQHVFPQPMLSVMFDTHILDSVLTQLDQDPSGLYSMTVRTRIPR 208

Query: 60  NSLPTTVELLCEMQVPLANYYSKKRDLFY 88
           + L +   + C   +   NY  ++  +FY
Sbjct: 209 DQLESPTPITCAFILVGTNYTKRRETIFY 237


>L23146-1|AAA03750.1| 1011|Drosophila melanogaster neuromusculin
           protein.
          Length = 1011

 Score = 29.5 bits (63), Expect = 0.62
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 11  LNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTA 51
           L   C V    P+PE++   G + L     + +L+DG YT+
Sbjct: 180 LKATCTVRNTRPQPEVSWFRGTKRLTTYSPTHDLVDGLYTS 220


>AE014296-3753|ABI31268.1| 1036|Drosophila melanogaster CG8779-PB,
           isoform B protein.
          Length = 1036

 Score = 29.5 bits (63), Expect = 0.62
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 11  LNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTA 51
           L   C V    P+PE++   G + L     + +L+DG YT+
Sbjct: 183 LKATCTVRNTRPQPEVSWFRGTKRLTTYSPTHDLVDGLYTS 223


>AE014296-3752|AAF51887.4| 1087|Drosophila melanogaster CG8779-PA,
           isoform A protein.
          Length = 1087

 Score = 29.5 bits (63), Expect = 0.62
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 11  LNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTA 51
           L   C V    P+PE++   G + L     + +L+DG YT+
Sbjct: 183 LKATCTVRNTRPQPEVSWFRGTKRLTTYSPTHDLVDGLYTS 223


>DQ138902-1|ABA86508.1| 1333|Drosophila melanogaster CG6890 protein.
          Length = 1333

 Score = 29.1 bits (62), Expect = 0.83
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 4   DRLDE-DYLNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSL 62
           +RL++ DY +I   ++ +  +      +GN   I+++ S++  D  Y  LT   +  +S+
Sbjct: 549 NRLEKFDYSHIPIGLQWLDVRANRITQLGNYFEIESELSLSTFDASYNLLTE--ITASSI 606

Query: 63  PTTVELL 69
           P +VE+L
Sbjct: 607 PNSVEVL 613


>AY118551-1|AAM49920.1| 1346|Drosophila melanogaster LD33590p
           protein.
          Length = 1346

 Score = 29.1 bits (62), Expect = 0.83
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 4   DRLDE-DYLNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSL 62
           +RL++ DY +I   ++ +  +      +GN   I+++ S++  D  Y  LT   +  +S+
Sbjct: 556 NRLEKFDYSHIPIGLQWLDVRANRITQLGNYFEIESELSLSTFDASYNLLTE--ITASSI 613

Query: 63  PTTVELL 69
           P +VE+L
Sbjct: 614 PNSVEVL 620


>AF247764-1|AAF86224.1| 1346|Drosophila melanogaster Toll-8 protein.
          Length = 1346

 Score = 29.1 bits (62), Expect = 0.83
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 4   DRLDE-DYLNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSL 62
           +RL++ DY +I   ++ +  +      +GN   I+++ S++  D  Y  LT   +  +S+
Sbjct: 556 NRLEKFDYSHIPIGLQWLDVRANRITQLGNYFEIESELSLSTFDASYNLLTE--ITASSI 613

Query: 63  PTTVELL 69
           P +VE+L
Sbjct: 614 PNSVEVL 620


>AF204158-1|AAF18983.1| 1346|Drosophila melanogaster cell surface
           receptor TOLLO protein.
          Length = 1346

 Score = 29.1 bits (62), Expect = 0.83
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 4   DRLDE-DYLNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSL 62
           +RL++ DY +I   ++ +  +      +GN   I+++ S++  D  Y  LT   +  +S+
Sbjct: 556 NRLEKFDYSHIPIGLQWLDVRANRITQLGNYFEIESELSLSTFDASYNLLTE--ITASSI 613

Query: 63  PTTVELL 69
           P +VE+L
Sbjct: 614 PNSVEVL 620


>AE014296-2494|AAF49650.1| 1346|Drosophila melanogaster CG6890-PA
           protein.
          Length = 1346

 Score = 29.1 bits (62), Expect = 0.83
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 4   DRLDE-DYLNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSL 62
           +RL++ DY +I   ++ +  +      +GN   I+++ S++  D  Y  LT   +  +S+
Sbjct: 556 NRLEKFDYSHIPIGLQWLDVRANRITQLGNYFEIESELSLSTFDASYNLLTE--ITASSI 613

Query: 63  PTTVELL 69
           P +VE+L
Sbjct: 614 PNSVEVL 620


>AE013599-878|AAM71069.2| 2172|Drosophila melanogaster CG1884-PA,
            isoform A protein.
          Length = 2172

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 26   LNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVN 60
            LN L+  R L D +S+ NL+      LT  +VN++
Sbjct: 1421 LNALIATRRLRDQESAFNLLTRAVEGLTEGLVNMH 1455


>AE013599-877|AAF58926.2| 2170|Drosophila melanogaster CG1884-PB,
            isoform B protein.
          Length = 2170

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 26   LNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVN 60
            LN L+  R L D +S+ NL+      LT  +VN++
Sbjct: 1421 LNALIATRRLRDQESAFNLLTRAVEGLTEGLVNMH 1455


>BT025908-1|ABG02152.1|  400|Drosophila melanogaster IP05642p
           protein.
          Length = 400

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)

Query: 9   DYLNIICAVEGVYPKPELNILVGNRLLIDTKSSIN---LIDGRYTALTTAVVNVNSLPTT 65
           D + I C V G  P+P++  LV N LL+D ++  N   +I+ R    +    ++NS+ T 
Sbjct: 96  DDIVITCRVVGGRPQPQVRWLV-NGLLVDNQNEHNSGDVIENRLLWPSVQRNDLNSVFTC 154

Query: 66  VELLCEMQVP 75
             L  ++  P
Sbjct: 155 QALNTQLDKP 164


>BT022225-1|AAY54641.1|  481|Drosophila melanogaster IP12444p
           protein.
          Length = 481

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 7   DEDYLNIICAVEGVYPKPELNI 28
           D+D L ++     +YPKP L++
Sbjct: 392 DQDTLTLVLMTNAIYPKPSLDV 413


>BT012508-1|AAS93779.1|  387|Drosophila melanogaster AT17934p
           protein.
          Length = 387

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 12  NIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSLPTT----VE 67
           N     +GVY  P +  L  NRLL     S++L   + +++ ++++  N+L        E
Sbjct: 176 NFALIADGVYKSPGVRRLSANRLL---GMSLSLDTEKISSVLSSLLMQNTLWALSLEHCE 232

Query: 68  LLCEMQVPLANYYSKKRDLFYR 89
           L  +  +P+A + ++    F R
Sbjct: 233 LTAQDMIPIAEHLARTNSKFRR 254


>AE014297-1088|AAF54492.1|  450|Drosophila melanogaster CG5361-PA
           protein.
          Length = 450

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 7   DEDYLNIICAVEGVYPKPELNI 28
           D+D L ++     +YPKP L++
Sbjct: 390 DQDTLTLVLMTNAIYPKPSLDV 411


>AE014134-2537|AAX52666.1|  867|Drosophila melanogaster CG33515-PA
           protein.
          Length = 867

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)

Query: 9   DYLNIICAVEGVYPKPELNILVGNRLLIDTKSSIN---LIDGRYTALTTAVVNVNSLPTT 65
           D + I C V G  P+P++  LV N LL+D ++  N   +I+ R    +    ++NS+ T 
Sbjct: 200 DDIVITCRVVGGRPQPQVRWLV-NGLLVDNQNEHNSGDVIENRLLWPSVQRNDLNSVFTC 258

Query: 66  VELLCEMQVP 75
             L  ++  P
Sbjct: 259 QALNTQLDKP 268


>AE013599-771|AAF58999.1|  387|Drosophila melanogaster CG8197-PA
           protein.
          Length = 387

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 12  NIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSLPTT----VE 67
           N     +GVY  P +  L  NRLL     S++L   + +++ ++++  N+L        E
Sbjct: 176 NFALIADGVYKSPGVRRLSANRLL---GMSLSLDTEKISSVLSSLLMQNTLWALSLEHCE 232

Query: 68  LLCEMQVPLANYYSKKRDLFYR 89
           L  +  +P+A + ++    F R
Sbjct: 233 LTAQDMIPIAEHLARTNSKFRR 254


>AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,
            isoform B protein.
          Length = 2833

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 17   VEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSLPT 64
            ++GV   P LNIL  N  L +  +S          L T  V++ ++PT
Sbjct: 2251 IKGVSVLPSLNILTANSTLTERTTSSTPDFSTPRTLKTPPVSLTTVPT 2298


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.139    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,544,400
Number of Sequences: 52641
Number of extensions: 149622
Number of successful extensions: 263
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 254
Number of HSP's gapped (non-prelim): 19
length of query: 94
length of database: 24,830,863
effective HSP length: 72
effective length of query: 22
effective length of database: 21,040,711
effective search space: 462895642
effective search space used: 462895642
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)