Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001050-TA|BGIBMGA001050-PA|undefined
(94 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022973-4|AAC25798.1| 314|Caenorhabditis elegans Temporarily a... 31 0.16
AL117195-28|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical... 26 3.4
Z99283-1|CAB16536.2| 414|Caenorhabditis elegans Hypothetical pr... 26 4.4
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 26 4.4
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 26 4.4
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 26 4.4
AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical ... 26 4.4
AF024494-11|AAB70329.1| 188|Caenorhabditis elegans Hypothetical... 26 4.4
Z81056-2|CAB02901.2| 323|Caenorhabditis elegans Hypothetical pr... 25 5.9
U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical p... 25 5.9
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 25 7.7
>AF022973-4|AAC25798.1| 314|Caenorhabditis elegans Temporarily
assigned gene nameprotein 57 protein.
Length = 314
Score = 30.7 bits (66), Expect = 0.16
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 8 EDYLNIICAVEGVYPKPELNILVGN-RLLIDTKSSINLIDGRYTALTTAVVNVNSLPTTV 66
EDY ++ ++ V ++ IL+ N + D ++ ++G LT V+NVN LP T
Sbjct: 119 EDYKRLLHSLNEV----DIGILINNVGMCFDNPEVLHRVEGGIDTLTN-VINVNILPLTA 173
Query: 67 ELLCEM 72
+L +M
Sbjct: 174 GILPQM 179
>AL117195-28|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
protein Y57A10A.31 protein.
Length = 1048
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 2 IQDRLDEDYLNIICAVEGVY----PKPELNILVG 31
I+ R+DE NI C ++G + P +NI++G
Sbjct: 835 IRSRIDEQQFNIRCEIDGCHRVLTPAEIMNIILG 868
>Z99283-1|CAB16536.2| 414|Caenorhabditis elegans Hypothetical
protein Y70C5C.2 protein.
Length = 414
Score = 25.8 bits (54), Expect = 4.4
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 13 IICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVN 58
+I G Y P N+ GN +L+ +S+ +TA+ ++ V+
Sbjct: 367 VIAKYSGYYEWPFFNVSTGNSMLVTFRSNSTFGYYGFTAIASSYVH 412
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 25.8 bits (54), Expect = 4.4
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 17 VEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSLPTTVELLCEMQVPL 76
++G+ P + NI+ GN I+ + L D Y ++ + P + L + +
Sbjct: 239 LKGIIPTSDYNIIFGNIEEINVLHTALLADLEYPVKVALGLSDATPPRPISLNECVPQTI 298
Query: 77 ANYYSKKRDLFYR-GWYCA 94
+ K RD F G YC+
Sbjct: 299 GEVFIKYRDQFLAYGKYCS 317
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 25.8 bits (54), Expect = 4.4
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 17 VEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSLPTTVELLCEMQVPL 76
++G+ P + NI+ GN I+ + L D Y ++ + P + L + +
Sbjct: 271 LKGIIPTSDYNIIFGNIEEINVLHTALLADLEYPVKVALGLSDATPPRPISLNECVPQTI 330
Query: 77 ANYYSKKRDLFYR-GWYCA 94
+ K RD F G YC+
Sbjct: 331 GEVFIKYRDQFLAYGKYCS 349
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 25.8 bits (54), Expect = 4.4
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 17 VEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSLPTTVELLCEMQVPL 76
++G+ P + NI+ GN I+ + L D Y ++ + P + L + +
Sbjct: 271 LKGIIPTSDYNIIFGNIEEINVLHTALLADLEYPVKVALGLSDATPPRPISLNECVPQTI 330
Query: 77 ANYYSKKRDLFYR-GWYCA 94
+ K RD F G YC+
Sbjct: 331 GEVFIKYRDQFLAYGKYCS 349
>AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical
protein C26G2.1 protein.
Length = 1270
Score = 25.8 bits (54), Expect = 4.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 11 LNIICAVEGVYPKPE-LNILVGNRLLIDTK-SSINLIDGRYTALTTAVVNVNSLPTTVEL 68
LNI C V V P+PE L + G + D K +S ++ +T T+ VV + +
Sbjct: 148 LNITCVVPNVKPEPEVLWYMDGKVMSRDVKQASTPHLNKTFTVYTSLVVQSDRNDHGKVI 207
Query: 69 LCE 71
CE
Sbjct: 208 TCE 210
Score = 25.4 bits (53), Expect = 5.9
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 2 IQDR--LDEDYLNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNV 59
++DR + D +N+ C +G P EL+ G S +L+ GR + V
Sbjct: 439 LEDRKFFEGDIVNVTCEAQGGNPLAELSWYRG--------SEKHLVKGRKKMKWSQVKK- 489
Query: 60 NSLPTTVELLCEMQVPLANYYSKKRDLFY 88
+ LLC +V + N++ +++FY
Sbjct: 490 ---KLVMSLLCLCEVVIMNFFRFSKNVFY 515
>AF024494-11|AAB70329.1| 188|Caenorhabditis elegans Hypothetical
protein C38C3.8 protein.
Length = 188
Score = 25.8 bits (54), Expect = 4.4
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 63 PTTVELLCEMQVPLANYYSKKRDLFYRGW 91
P++V+ +CE + +A +Y +F R W
Sbjct: 22 PSSVQCMCEENMHVALWYEHGSPIFGRSW 50
>Z81056-2|CAB02901.2| 323|Caenorhabditis elegans Hypothetical
protein F09F3.2 protein.
Length = 323
Score = 25.4 bits (53), Expect = 5.9
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 11 LNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSLPTTVELLC 70
L++I ++ P + I G L + +SI + + +TTA+ N ++ T V L
Sbjct: 154 LSLIAGCSCIFD-PNIFIWTGKGTLCEEYASIYV--PAFIFVTTAITNSINIMTAVRLFM 210
Query: 71 EMQVPLANYYSKKR 84
E L SK+R
Sbjct: 211 EKLTSLGVVESKRR 224
>U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical
protein ZK1290.10 protein.
Length = 412
Score = 25.4 bits (53), Expect = 5.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 49 YTALTTAVVNVNSLPTTVEL 68
Y+ TTA VN S PTT L
Sbjct: 270 YSTTTTAPVNTTSAPTTTHL 289
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 25.0 bits (52), Expect = 7.7
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 3 QDRLDEDYLNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTA 51
+D LD I +G +P+ LN +VG + D I+ I Y A
Sbjct: 1075 EDVLDSSVKRIYVGTDGKWPRNRLNSIVGYLEIDDEPVRIDEIKPFYMA 1123
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.139 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,370,081
Number of Sequences: 27539
Number of extensions: 80097
Number of successful extensions: 167
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 162
Number of HSP's gapped (non-prelim): 12
length of query: 94
length of database: 12,573,161
effective HSP length: 69
effective length of query: 25
effective length of database: 10,672,970
effective search space: 266824250
effective search space used: 266824250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 52 (25.0 bits)
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