GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001050-TA|BGIBMGA001050-PA|undefined
         (94 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   2.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   2.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   3.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   3.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   3.4  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 13/49 (26%), Positives = 19/49 (38%)

Query: 14  ICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSL 62
           +C  +  Y   +   L       D K    LID   + +   V NVNS+
Sbjct: 462 VCHADDAYMVVDTPFLASTTTTNDIKMQKVLIDFWVSFVNNGVPNVNSV 510


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 13/49 (26%), Positives = 19/49 (38%)

Query: 14  ICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSL 62
           +C  +  Y   +   L       D K    LID   + +   V NVNS+
Sbjct: 462 VCHADDAYMVVDTPFLASTTTTNDIKMQKVLIDFWVSFVNNGVPNVNSV 510


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 63  PTTVELLCEMQVPLANYYSKKRDLFY 88
           PT +E L    +  +  YSK+ DL +
Sbjct: 644 PTVLEELTHGTLAASTLYSKRPDLLH 669


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 63  PTTVELLCEMQVPLANYYSKKRDLFY 88
           PT +E L    +  +  YSK+ DL +
Sbjct: 644 PTVLEELTHGTLAASTLYSKRPDLLH 669


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 63  PTTVELLCEMQVPLANYYSKKRDLFY 88
           PT +E L    +  +  YSK+ DL +
Sbjct: 644 PTVLEELTHGTLAASTLYSKRPDLLH 669


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.139    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,147
Number of Sequences: 429
Number of extensions: 1118
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 94
length of database: 140,377
effective HSP length: 49
effective length of query: 45
effective length of database: 119,356
effective search space:  5371020
effective search space used:  5371020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.5 bits)
S2: 38 (19.4 bits)