Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001050-TA|BGIBMGA001050-PA|undefined
(94 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g67360.1 68418.m08494 cucumisin-like serine protease (ARA12) ... 30 0.26
At4g15040.1 68417.m02310 subtilase family protein contains simil... 27 1.8
At3g15357.1 68416.m01947 expressed protein 27 1.8
At4g08470.1 68417.m01398 mitogen-activated protein kinase, putat... 26 3.2
At3g46270.1 68416.m05008 receptor protein kinase-related contain... 26 4.2
At4g37050.1 68417.m05247 patatin, putative similar to patatin-li... 25 5.5
At4g12420.1 68417.m01964 multi-copper oxidase, putative (SKU5) i... 25 7.3
At1g67440.1 68414.m07676 expressed protein contains Pfam domain ... 25 7.3
At1g61260.1 68414.m06904 expressed protein contains similarity t... 25 7.3
At5g43240.1 68418.m05284 hypothetical protein contains Pfam prof... 25 9.7
At2g25630.1 68415.m03072 glycosyl hydrolase family 1 protein con... 25 9.7
>At5g67360.1 68418.m08494 cucumisin-like serine protease (ARA12)
Asp48; almost identical to cucumisin-like serine
protease (ARA12) GI:3176874 from [Arabidopsis thaliana]
Length = 757
Score = 29.9 bits (64), Expect = 0.26
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 1 MIQDRLDEDYLNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVN 60
+I D EDYL +CA+ Y P++ + D S ++ D Y + V V
Sbjct: 614 LIYDLTTEDYLGFLCALN--YTSPQIRSVSRRNYTCDPSKSYSVADLNYPSFAVNVDGVG 671
Query: 61 SLPTT 65
+ T
Sbjct: 672 AYKYT 676
>At4g15040.1 68417.m02310 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]
Length = 687
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/56 (19%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 1 MIQDRLDEDYLNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAV 56
++ + EDYLN++C+++ Y ++ + G +S + + + Y +++ V
Sbjct: 543 LVYEIAKEDYLNMLCSLD--YSSQGISTIAGGTFTCSEQSKLTMRNLNYPSMSAKV 596
>At3g15357.1 68416.m01947 expressed protein
Length = 143
Score = 27.1 bits (57), Expect = 1.8
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 34 LLIDTKSSINL-IDGRYTALTTAVVNVNSLPTTVELLCEMQVPLANYYSKKRDLF 87
L+ D KS NL + GR LT V N P LLC Q+P A+ Y + F
Sbjct: 12 LIRDGKSLTNLFLRGRKINLTETVQNNG--PAIRSLLCFNQMPAASQYPVYSETF 64
>At4g08470.1 68417.m01398 mitogen-activated protein kinase, putative
similar to mitogen-activated protein kinase [Arabidopsis
thaliana] gi|1255448|dbj|BAA09057; contains Pfam
PF00069: Protein kinase domain
Length = 560
Score = 26.2 bits (55), Expect = 3.2
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 30 VGNRLLIDTKSSINLIDGRYTALTTAVVNVNSLPTTVELL 69
+G L D +++L D R+ LT VN PT ELL
Sbjct: 514 IGRGTLPDVPDTLSL-DARHFILTCLKVNPEERPTAAELL 552
>At3g46270.1 68416.m05008 receptor protein kinase-related contains
weak similarity to light repressible receptor protein
kinase (GI:1321686) [Arabidopsis thaliana]
Length = 470
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 7 DEDYLNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGRYTALTTAVVNVNSLPTTV 66
D+ ++I C G Y VG++ + T SIN+ D +TT +N T
Sbjct: 26 DQKGISIDCGTTGSYVDSNNVTWVGDKGFVTTGESINITD-----VTTKPINTLRYFPTG 80
Query: 67 ELLCEMQVPL 76
+ C +P+
Sbjct: 81 QTNCYTNIPV 90
>At4g37050.1 68417.m05247 patatin, putative similar to patatin-like
latex allergen [Hevea brasiliensis][PMID:10589016];
contains patatin domain PF01734
Length = 339
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 30 VGNRLLIDTKSSINLIDGRYTALTTAVVNVNSLPTTVELLCE 71
VG LL S +NL G Y ++ V N +L ++L E
Sbjct: 284 VGEALLKKRVSRVNLESGHYQPISENVTNEEALKRFAKVLSE 325
>At4g12420.1 68417.m01964 multi-copper oxidase, putative (SKU5)
identical to multi-copper oxidase-related protein
(SKU5)(GI:18158154) [Arabidopsis thaliana]; similar to
pollen-specific protein precursor - common tobacco,
PIR2:S22495; contains Pfam profile: PF00394 Multicopper
oxidase
Length = 587
Score = 25.0 bits (52), Expect = 7.3
Identities = 6/30 (20%), Positives = 18/30 (60%)
Query: 14 ICAVEGVYPKPELNILVGNRLLIDTKSSIN 43
+ A+ G +P P +N+ L+++ ++ ++
Sbjct: 45 VIAINGKFPGPTINVTTNENLVVNVRNKLD 74
>At1g67440.1 68414.m07676 expressed protein contains Pfam domain
PF03193: Protein of unknown function, DUF258
Length = 433
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 11 LNIICAVEGVYPKPELNILVGNRLLIDTKSSINLIDGR 48
+ ++C V V K +LVG+++L+ SI+ +D R
Sbjct: 68 VELLCVVRAVLKKIRRRVLVGDKVLV---GSIDWVDRR 102
>At1g61260.1 68414.m06904 expressed protein contains similarity to
cotton fiber expressed protein 1 [Gossypium hirsutum]
gi|3264828|gb|AAC33276
Length = 344
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 52 LTTAVVNVNSLPTTVELLCEMQVPLANYYSKKR 84
+TT V ++S TV LL ++ VP+A +S R
Sbjct: 6 MTTKAVLISSGVATVALLLKLSVPVAVDFSVSR 38
>At5g43240.1 68418.m05284 hypothetical protein contains Pfam profile
PF05056: Protein of unknown function (DUF674)
Length = 512
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 33 RLLIDTKSSINLIDGRYTALTTAVVNVNSLPTTVELLCEMQVPLANYYSKKRDLF 87
RL ++ + +D VN+ +PT +E L PL + + KK+ +
Sbjct: 191 RLTLNVLKDLGYVDCEKLDEKIHDVNLEEVPTLLECLSTSDNPLTDTFLKKKSSY 245
>At2g25630.1 68415.m03072 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to amygdalin hydrolase isoform AH I precursor
(GI:16757966) [Prunus serotina]
Length = 489
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 17 VEGVYPKPELNILVGNRLLIDTKSSINLIDGRY 49
V G YP +N + G RL T N++ G Y
Sbjct: 303 VTGKYPVDMVNNVKGGRLPTFTSKQSNMLKGSY 335
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.139 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,211,205
Number of Sequences: 28952
Number of extensions: 74454
Number of successful extensions: 165
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 161
Number of HSP's gapped (non-prelim): 11
length of query: 94
length of database: 12,070,560
effective HSP length: 69
effective length of query: 25
effective length of database: 10,072,872
effective search space: 251821800
effective search space used: 251821800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 51 (24.6 bits)
- SilkBase 1999-2023 -