GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001049-TA|BGIBMGA001049-PA|undefined
         (89 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         21   5.0  
AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    21   8.8  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    21   8.8  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/21 (52%), Positives = 13/21 (61%)

Query: 66 VDMHTGQQVLERCLSTEEKLE 86
          VD   GQ VLE  L+ EE+ E
Sbjct: 40 VDNGVGQTVLEDTLTYEEQQE 60


>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
          carrier protein AP-1 protein.
          Length = 171

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query: 53 KCIVAGDETGDDVVDMHTGQQVLE 76
          KC++  + T DDV  +   ++ L+
Sbjct: 68 KCVIVKNSTKDDVNKVQVTRECLD 91


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse
          transcriptase protein.
          Length = 988

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 28 FLQNLNRIKVAEDIL 42
          F QNLN  + A+D+L
Sbjct: 5  FQQNLNHDQTAQDLL 19


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.137    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,561
Number of Sequences: 2123
Number of extensions: 3419
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 89
length of database: 516,269
effective HSP length: 54
effective length of query: 35
effective length of database: 401,627
effective search space: 14056945
effective search space used: 14056945
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)