GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001047-TA|BGIBMGA001047-PA|undefined
         (103 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   0.37 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   3.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   6.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    20   6.0  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    19   7.9  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    19   7.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 0.37
 Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 35  IMEWIMKLPVSLFK-SIRIGSFIVNLFGFVKMRY 67
           + +++M+  V  F+ S+R   F+  +FG V ++Y
Sbjct: 360 LKQYVMQQQVKNFRHSVRSVFFLSEIFGLVNLKY 393


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 44  VSLFKSIRIGSFIVNLFGFV 63
           +++ KS+R   +IV+L G V
Sbjct: 501 INIMKSVRQHPYIVSLIGCV 520


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 19.8 bits (39), Expect = 6.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)

Query: 54  SFIVNLFGFV 63
           SF+VN FGF+
Sbjct: 488 SFLVNDFGFI 497


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 19.8 bits (39), Expect = 6.0
 Identities = 9/34 (26%), Positives = 20/34 (58%)

Query: 48  KSIRIGSFIVNLFGFVKMRYLFVIALNNIGLRDF 81
           KS R+   I NL+  + + +   + ++++G+R F
Sbjct: 111 KSFRMNFAIFNLYMVLLLLFDAYLWISSVGVRMF 144


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 19.4 bits (38), Expect = 7.9
 Identities = 8/30 (26%), Positives = 16/30 (53%)

Query: 54  SFIVNLFGFVKMRYLFVIALNNIGLRDFVL 83
           ++ + + GF+ +    +    N GL+D VL
Sbjct: 138 NYRIGIIGFLSLEDPDLEVPGNAGLKDMVL 167


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 19.4 bits (38), Expect = 7.9
 Identities = 8/30 (26%), Positives = 16/30 (53%)

Query: 54  SFIVNLFGFVKMRYLFVIALNNIGLRDFVL 83
           ++ + + GF+ +    +    N GL+D VL
Sbjct: 138 NYRIGIIGFLSLEDPDLEVPGNAGLKDMVL 167


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.338    0.150    0.489 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,778
Number of Sequences: 317
Number of extensions: 927
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 103
length of database: 114,650
effective HSP length: 48
effective length of query: 55
effective length of database: 99,434
effective search space:  5468870
effective search space used:  5468870
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (21.3 bits)
S2: 38 (19.4 bits)