Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001046-TA|BGIBMGA001046-PA|undefined
(90 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40215-1|AAC50718.1| 478|Homo sapiens synapsin IIb protein. 29 3.0
BC117460-1|AAI17461.1| 579|Homo sapiens synapsin III protein. 29 3.0
BC051307-1|AAH51307.1| 582|Homo sapiens synapsin II protein. 29 3.0
BC025275-1|AAH25275.1| 483|Homo sapiens ATPase, H+ transporting... 29 3.0
AF298777-1|AAG22809.1| 483|Homo sapiens vacuolar ATPase subunit... 29 3.0
AF132945-1|AAD27720.1| 483|Homo sapiens CGI-11 protein protein. 29 3.0
AF125105-1|AAL75942.1| 476|Homo sapiens vacuolar proton pump su... 29 3.0
AF112204-1|AAF17192.1| 483|Homo sapiens Vacuolar proton pump su... 29 3.0
AF077737-1|AAC33789.1| 478|Homo sapiens synapsin IIb protein. 29 3.0
AF077671-1|AAC28368.1| 582|Homo sapiens synapsin IIa protein. 29 3.0
AB209684-1|BAD92921.1| 611|Homo sapiens Synapsin-3 variant prot... 29 3.0
AB209088-1|BAD92325.1| 514|Homo sapiens synapsin II isoform IIb... 29 3.0
U58766-1|AAC50786.1| 321|Homo sapiens FX protein. 28 5.2
BC093061-1|AAH93061.1| 321|Homo sapiens TSTA3 protein protein. 28 5.2
BC001941-1|AAH01941.1| 321|Homo sapiens tissue specific transpl... 28 5.2
>U40215-1|AAC50718.1| 478|Homo sapiens synapsin IIb protein.
Length = 478
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 6 REGSNVNASYKPQIAAIKQNAYGMA 30
R G+ V S++P I+Q+A+GMA
Sbjct: 169 RNGTKVVRSFRPDFVLIRQHAFGMA 193
>BC117460-1|AAI17461.1| 579|Homo sapiens synapsin III protein.
Length = 579
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 6 REGSNVNASYKPQIAAIKQNAYGMAV 31
R G+ V S+KP ++Q+AY MA+
Sbjct: 147 RNGTKVVRSFKPDFILVRQHAYSMAL 172
>BC051307-1|AAH51307.1| 582|Homo sapiens synapsin II protein.
Length = 582
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 6 REGSNVNASYKPQIAAIKQNAYGMA 30
R G+ V S++P I+Q+A+GMA
Sbjct: 169 RNGTKVVRSFRPDFVLIRQHAFGMA 193
>BC025275-1|AAH25275.1| 483|Homo sapiens ATPase, H+ transporting,
lysosomal 50/57kDa, V1 subunit H protein.
Length = 483
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 4 EPREGSNVNASY---KPQIAAIKQNAYGMAVETTGVWSSEAKKFIAAI 48
E EGS++N + K Q+++ K G+AVET V SS++ +++ +
Sbjct: 154 ELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVSSSDSSQYVQCV 201
>AF298777-1|AAG22809.1| 483|Homo sapiens vacuolar ATPase subunit H
protein.
Length = 483
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 4 EPREGSNVNASY---KPQIAAIKQNAYGMAVETTGVWSSEAKKFIAAI 48
E EGS++N + K Q+++ K G+AVET V SS++ +++ +
Sbjct: 154 ELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVSSSDSSQYVQCV 201
>AF132945-1|AAD27720.1| 483|Homo sapiens CGI-11 protein protein.
Length = 483
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 4 EPREGSNVNASY---KPQIAAIKQNAYGMAVETTGVWSSEAKKFIAAI 48
E EGS++N + K Q+++ K G+AVET V SS++ +++ +
Sbjct: 154 ELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVSSSDSSQYVQCV 201
>AF125105-1|AAL75942.1| 476|Homo sapiens vacuolar proton pump
subunit SFD alpha isoform protein.
Length = 476
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 4 EPREGSNVNASY---KPQIAAIKQNAYGMAVETTGVWSSEAKKFIAAI 48
E EGS++N + K Q+++ K G+AVET V SS++ +++ +
Sbjct: 154 ELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVSSSDSSQYVQCV 201
>AF112204-1|AAF17192.1| 483|Homo sapiens Vacuolar proton pump
subunit SFD alpha isoform protein.
Length = 483
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 4 EPREGSNVNASY---KPQIAAIKQNAYGMAVETTGVWSSEAKKFIAAI 48
E EGS++N + K Q+++ K G+AVET V SS++ +++ +
Sbjct: 154 ELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVSSSDSSQYVQCV 201
>AF077737-1|AAC33789.1| 478|Homo sapiens synapsin IIb protein.
Length = 478
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 6 REGSNVNASYKPQIAAIKQNAYGMA 30
R G+ V S++P I+Q+A+GMA
Sbjct: 169 RNGTKVVRSFRPDFVLIRQHAFGMA 193
>AF077671-1|AAC28368.1| 582|Homo sapiens synapsin IIa protein.
Length = 582
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 6 REGSNVNASYKPQIAAIKQNAYGMA 30
R G+ V S++P I+Q+A+GMA
Sbjct: 169 RNGTKVVRSFRPDFVLIRQHAFGMA 193
>AB209684-1|BAD92921.1| 611|Homo sapiens Synapsin-3 variant
protein.
Length = 611
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 6 REGSNVNASYKPQIAAIKQNAYGMAV 31
R G+ V S+KP ++Q+AY MA+
Sbjct: 179 RNGTKVVRSFKPDFILVRQHAYSMAL 204
>AB209088-1|BAD92325.1| 514|Homo sapiens synapsin II isoform IIb
variant protein.
Length = 514
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 6 REGSNVNASYKPQIAAIKQNAYGMA 30
R G+ V S++P I+Q+A+GMA
Sbjct: 205 RNGTKVVRSFRPDFVLIRQHAFGMA 229
>U58766-1|AAC50786.1| 321|Homo sapiens FX protein.
Length = 321
Score = 27.9 bits (59), Expect = 5.2
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 12/84 (14%)
Query: 5 PREGSNVNASYKPQIAAIKQNAYGM-------AVETTGVWSSEAKKFIAAIGHRLRRHDP 57
P SN SY ++ ++ AY AV T V+ F GH L P
Sbjct: 135 PPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPH-DNFNIEDGHVL----P 189
Query: 58 GLVQRLSIAIQRGNAASVMGTFGP 81
GL+ ++ +A G+A +V GT P
Sbjct: 190 GLIHKVHLAKSSGSALTVWGTGNP 213
>BC093061-1|AAH93061.1| 321|Homo sapiens TSTA3 protein protein.
Length = 321
Score = 27.9 bits (59), Expect = 5.2
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 12/84 (14%)
Query: 5 PREGSNVNASYKPQIAAIKQNAYGM-------AVETTGVWSSEAKKFIAAIGHRLRRHDP 57
P SN SY ++ ++ AY AV T V+ F GH L P
Sbjct: 135 PPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPH-DNFNIEDGHVL----P 189
Query: 58 GLVQRLSIAIQRGNAASVMGTFGP 81
GL+ ++ +A G+A +V GT P
Sbjct: 190 GLIHKVHLAKSSGSALTVWGTGNP 213
>BC001941-1|AAH01941.1| 321|Homo sapiens tissue specific
transplantation antigen P35B protein.
Length = 321
Score = 27.9 bits (59), Expect = 5.2
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 12/84 (14%)
Query: 5 PREGSNVNASYKPQIAAIKQNAYGM-------AVETTGVWSSEAKKFIAAIGHRLRRHDP 57
P SN SY ++ ++ AY AV T V+ F GH L P
Sbjct: 135 PPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPH-DNFNIEDGHVL----P 189
Query: 58 GLVQRLSIAIQRGNAASVMGTFGP 81
GL+ ++ +A G+A +V GT P
Sbjct: 190 GLIHKVHLAKSSGSALTVWGTGNP 213
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.132 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,663,339
Number of Sequences: 224733
Number of extensions: 366953
Number of successful extensions: 557
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 550
Number of HSP's gapped (non-prelim): 15
length of query: 90
length of database: 73,234,838
effective HSP length: 68
effective length of query: 22
effective length of database: 57,952,994
effective search space: 1274965868
effective search space used: 1274965868
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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