GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001046-TA|BGIBMGA001046-PA|undefined
         (90 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113275-1|AAM29280.1|  206|Drosophila melanogaster AT17273p pro...    27   4.2  
AE014296-2918|AAF49333.2|  206|Drosophila melanogaster CG6333-PA...    27   4.2  
M64084-1|AAB95431.1| 1597|Drosophila melanogaster small optic lo...    26   5.6  
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro...    26   5.6  
BT003554-1|AAO39558.1|  307|Drosophila melanogaster LP10544p pro...    26   5.6  
AY058485-1|AAL13714.1|  477|Drosophila melanogaster GM13341p pro...    26   5.6  
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P...    26   5.6  
AE014297-338|AAF51964.1|  477|Drosophila melanogaster CG2100-PA ...    26   5.6  
AE014296-74|AAF47372.2| 1264|Drosophila melanogaster CG13882-PA ...    26   5.6  
AE014297-571|AAF54053.2|  901|Drosophila melanogaster CG10061-PA...    25   9.8  

>AY113275-1|AAM29280.1|  206|Drosophila melanogaster AT17273p
           protein.
          Length = 206

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 14/47 (29%), Positives = 22/47 (46%)

Query: 4   EPREGSNVNASYKPQIAAIKQNAYGMAVETTGVWSSEAKKFIAAIGH 50
           + RE   + A Y+ Q++ IK NA  +      V +S  +     IGH
Sbjct: 104 QQREMKRIKAHYERQVSTIKNNAIMLESHLQKVLASVERDRAKRIGH 150


>AE014296-2918|AAF49333.2|  206|Drosophila melanogaster CG6333-PA
           protein.
          Length = 206

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 14/47 (29%), Positives = 22/47 (46%)

Query: 4   EPREGSNVNASYKPQIAAIKQNAYGMAVETTGVWSSEAKKFIAAIGH 50
           + RE   + A Y+ Q++ IK NA  +      V +S  +     IGH
Sbjct: 104 QQREMKRIKAHYERQVSTIKNNAIMLESHLQKVLASVERDRAKRIGH 150


>M64084-1|AAB95431.1| 1597|Drosophila melanogaster small optic lobes
           protein protein.
          Length = 1597

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 5/34 (14%)

Query: 55  HDPGLVQRLSIAIQRGNAASVMGTFGPGAIQSGL 88
           HDPG   RLS     G A++  GT   GAI +G+
Sbjct: 596 HDPGSSSRLS-----GAASAAAGTASAGAIAAGV 624


>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p protein.
          Length = 1953

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 45   IAAIGHRLRRHDPGLVQRLSIA 66
            +  +  RLR HDP L+ R+S A
Sbjct: 1515 VCGLAERLRYHDPILINRVSFA 1536


>BT003554-1|AAO39558.1|  307|Drosophila melanogaster LP10544p
           protein.
          Length = 307

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 6   REGSNVNASYKPQIAAIKQNAYGMA-VETTGVWSSEAKKFI 45
           R  S  N   K  +AAIK+NA G+A +    +W SE +K +
Sbjct: 69  RIASEENNHDKATLAAIKENAKGLARISGERIW-SELQKIV 108


>AY058485-1|AAL13714.1|  477|Drosophila melanogaster GM13341p
           protein.
          Length = 477

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 6   REGSNVNASYKPQIAAIKQNAYGMA-VETTGVWSSEAKKFI 45
           R  S  N   K  +AAIK+NA G+A +    +W SE +K +
Sbjct: 239 RIASEENNHDKATLAAIKENAKGLARISGERIW-SELQKIV 278


>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
            protein.
          Length = 2528

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 45   IAAIGHRLRRHDPGLVQRLSIA 66
            +  +  RLR HDP L+ R+S A
Sbjct: 1515 VCGLAERLRYHDPILINRVSFA 1536


>AE014297-338|AAF51964.1|  477|Drosophila melanogaster CG2100-PA
           protein.
          Length = 477

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 6   REGSNVNASYKPQIAAIKQNAYGMA-VETTGVWSSEAKKFI 45
           R  S  N   K  +AAIK+NA G+A +    +W SE +K +
Sbjct: 239 RIASEENNHDKATLAAIKENAKGLARISGERIW-SELQKIV 278


>AE014296-74|AAF47372.2| 1264|Drosophila melanogaster CG13882-PA
           protein.
          Length = 1264

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 4   EPREGSNVNASYKPQIAAIKQNAYG 28
           +PR+G+    S KP+I+  K NA G
Sbjct: 133 KPRQGAASPESQKPEISGAKNNAAG 157


>AE014297-571|AAF54053.2|  901|Drosophila melanogaster CG10061-PA
           protein.
          Length = 901

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 9   SNVNASYKPQIAAIKQNAYGMAVE 32
           SN N+  K +IAA+KQ   G+ ++
Sbjct: 519 SNANSKEKKEIAALKQEVEGLQLQ 542


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.132    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,156,731
Number of Sequences: 52641
Number of extensions: 130372
Number of successful extensions: 277
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 271
Number of HSP's gapped (non-prelim): 10
length of query: 90
length of database: 24,830,863
effective HSP length: 69
effective length of query: 21
effective length of database: 21,198,634
effective search space: 445171314
effective search space used: 445171314
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)