GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001046-TA|BGIBMGA001046-PA|undefined
         (90 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   1.4  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    21   3.1  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    20   4.2  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    20   5.5  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
          D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 1.4
 Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 5/39 (12%)

Query: 3  GEPREGSNVN-----ASYKPQIAAIKQNAYGMAVETTGV 36
          G   EG+ +N     ASY PQ  + +++ + +A +  G+
Sbjct: 10 GSEEEGNQLNRSFYSASYPPQNRSQEEDLWNLATDRAGL 48


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
          protein.
          Length = 190

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 10 NVNASYKPQIAAIKQNAYGMAVETTG 35
          N+  + K + AA+K   +G+A+E  G
Sbjct: 39 NLLLASKAKGAAVKLADFGLAIEVQG 64


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)

Query: 39  SEAKKFIAAIGHRLRRH 55
           ++AK+FI ++  R R+H
Sbjct: 91  TKAKRFIKSLEERERKH 107


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
          protein protein.
          Length = 166

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)

Query: 55 HDPGLVQRLSIAIQRG 70
          HDPGL   L   I+ G
Sbjct: 54 HDPGLAAVLQYLIRSG 69


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.132    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,461
Number of Sequences: 429
Number of extensions: 702
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 90
length of database: 140,377
effective HSP length: 48
effective length of query: 42
effective length of database: 119,785
effective search space:  5030970
effective search space used:  5030970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.8 bits)
S2: 37 (19.0 bits)