Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001045-TA|BGIBMGA001045-PA|IPR008957|Fibronectin, type
III-like fold, IPR007110|Immunoglobulin-like
(292 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37927| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022
SB_23359| Best HMM Match : I-set (HMM E-Value=0) 36 0.051
SB_45852| Best HMM Match : I-set (HMM E-Value=0) 35 0.068
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 35 0.068
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 35 0.090
SB_10900| Best HMM Match : I-set (HMM E-Value=0) 34 0.12
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 33 0.36
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 32 0.48
SB_8817| Best HMM Match : I-set (HMM E-Value=0) 32 0.48
SB_56996| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_59380| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_43700| Best HMM Match : SRCR (HMM E-Value=0) 30 1.9
SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_59087| Best HMM Match : ig (HMM E-Value=1.5e-27) 30 2.6
SB_58150| Best HMM Match : ig (HMM E-Value=3.7e-24) 30 2.6
SB_50016| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_28333| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_24941| Best HMM Match : DPRP (HMM E-Value=1) 30 2.6
SB_33962| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36) 30 2.6
SB_19226| Best HMM Match : I-set (HMM E-Value=0) 29 3.4
SB_26711| Best HMM Match : I-set (HMM E-Value=0) 29 3.4
SB_1586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_33923| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_55856| Best HMM Match : TPR_2 (HMM E-Value=4.1e-14) 29 5.9
SB_46018| Best HMM Match : I-set (HMM E-Value=0.025) 29 5.9
SB_49916| Best HMM Match : ig (HMM E-Value=8.5e-06) 28 7.8
SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_58921| Best HMM Match : DUF286 (HMM E-Value=4.9) 28 7.8
SB_30548| Best HMM Match : I-set (HMM E-Value=2.1e-11) 28 7.8
SB_12991| Best HMM Match : TP2 (HMM E-Value=1.4) 28 7.8
>SB_37927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 36.7 bits (81), Expect = 0.022
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 14 VICEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRA 73
+IC YP P+ W ++ A VD T+ G +T + SD G+ SC A
Sbjct: 444 LICAATGYPMPSVL-WLKDNQA----VDTNHVTLH-SNGSLSITRVLFSD--RGSYSCVA 495
Query: 74 TNLAGQQPMPCLYTL-LPATRPDQPTNCT 101
TN+AG T+ +P T +PTN T
Sbjct: 496 TNVAGSASSVATLTVQVPPTVSGRPTNAT 524
Score = 36.3 bits (80), Expect = 0.029
Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 6 AALQEPTKVICEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVD 65
A L T +IC P P W + + D R T+ G S L+ V+ D
Sbjct: 734 AQLNGSTTLICLTRGIPSPR-ITWYRDRRV--VTPDGSRVTIN---GGS-LSIARVTRSD 786
Query: 66 YGTLSCRATNLAGQQPMPCLYTLLPATRPDQPTNCTVYNLTDDSLDLACIAGYEG 120
GT +C A+N AG T+ PD PT+ + LT S+ L+ + G
Sbjct: 787 GGTYACAASNAAGMTSRTANLTI--QVPPDPPTDVSALPLTSTSIKLSWKPAFNG 839
>SB_23359| Best HMM Match : I-set (HMM E-Value=0)
Length = 367
Score = 35.5 bits (78), Expect = 0.051
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Query: 16 CEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRATN 75
C V+A PP W+ + I + T V EG +VL D D G +CRATN
Sbjct: 27 CAVNAGMPPPFITWSRDGQP--INNTQDNSTAHVIEG-NVLKIAHAFDSDSGRYACRATN 83
Query: 76 LAGQQPMPCLYTLLPATRPDQPTNCTVYNLTDDSLDLAC-IAGY 118
L G + + + + Y T ++L C + GY
Sbjct: 84 LLGTAEAIAVLNVKAEPQVTVSPSRQHYVATGRQVELLCTVTGY 127
>SB_45852| Best HMM Match : I-set (HMM E-Value=0)
Length = 1122
Score = 35.1 bits (77), Expect = 0.068
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 14 VICEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRA 73
+IC V+ PPP W N S ++FT+ + V S D G SCRA
Sbjct: 158 IICPVEGLPPPKV-TWAKNGPIAS----GDKFTI-ARSTDLVFNSGKASVFDSGRYSCRA 211
Query: 74 TNLAGQQPMPCLYTLLPATRPDQPTNCTV 102
N GQ Y+ + P PT T+
Sbjct: 212 VNNLGQD---TAYSEVTFREPKAPTIMTL 237
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 23 PPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRATNLAGQQPM 82
P W +N SA + E T++V L+ + ++ + G C++ N+AG+
Sbjct: 381 PKPAVTWFINGSAVT-----ESDTLKVDPNTGALSIIEITAEEQGQYMCKSKNIAGEDLE 435
Query: 83 PCLYTLLPATRPDQPTNCTVYNLTD 107
T++ P + VY++ D
Sbjct: 436 TSYTTVVGPVAPKIQLSNKVYSVVD 460
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 35.1 bits (77), Expect = 0.068
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 14 VICEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRA 73
++C++ A P TFEW+ N S +R+D R S L ++ D GT SC A
Sbjct: 1951 LVCKLSAEAKP-TFEWSRNGSP--VRLD-NRVQASFDGRYSTLKFLNAKIEDQGTYSCLA 2006
Query: 74 TNLAG 78
N+ G
Sbjct: 2007 KNVFG 2011
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 34.7 bits (76), Expect = 0.090
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 17 EVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEV-KEGRSVLTYMP-VSDVDYGTLSCRAT 74
++DA+P P EW L ++ + D RF ++ KE S + ++ V D GT+ C AT
Sbjct: 1139 KIDAFPKPE-IEWYLGATKIT---DGGRFKIKTDKENCSYILFIDDVKLDDAGTVKCSAT 1194
Query: 75 NLAGQ 79
N AG+
Sbjct: 1195 NAAGK 1199
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 18 VDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRATNLA 77
++ YP P T EW + I + +E +G+ L ++ D G C ATN A
Sbjct: 14 IEGYPKP-TVEWYQGKN--KIGSSGKHKILEDDDGKCSLIIKDLTKDDAGAYKCVATNDA 70
Query: 78 GQ 79
GQ
Sbjct: 71 GQ 72
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 18 VDAYPPPNTFEWTLNSSAGSIRV-DAERFTV-EVKE-GRSVLTYMPVSDVDYGTLSCRAT 74
+ YP P+ EW G+I++ D++++ + + KE G L V+ D GT C AT
Sbjct: 3511 ITGYPYPHV-EWY----RGTIKLHDSDKYKIAQTKEDGLYSLIVNDVTKDDIGTYKCLAT 3565
Query: 75 NLAG 78
N AG
Sbjct: 3566 NSAG 3569
>SB_10900| Best HMM Match : I-set (HMM E-Value=0)
Length = 1642
Score = 34.3 bits (75), Expect = 0.12
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 7 ALQEPTKVICEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDY 66
AL ++ C+ D PPP W +S GS+ + R TV G ++T D
Sbjct: 489 ALGATARLDCQADGDPPP-LMTW--ETSQGSV-IGQARHTVAAN-GTLIITMATAGDT-- 541
Query: 67 GTLSCRATNLAG 78
G L+C ATN AG
Sbjct: 542 GWLTCTATNAAG 553
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 13 KVICEVDAYPPPNTFEWTLNSSAGSIRVDA-ERFTVEVKEGRSVLTYMPVSDVDYGTLSC 71
K+ C+ D YP P W + G+ D R TV R+ L ++P + D+G C
Sbjct: 814 KLTCQADGYPLPQ-ITWNPSPPMGNTSYDVIGRTTV-----RATLIFVPRNATDFGKYKC 867
Query: 72 RATNLAG 78
A N G
Sbjct: 868 SARNENG 874
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 13 KVICEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCR 72
K C+ P PN W + SA + VD ++ + ++L VS +D GT SC
Sbjct: 790 KFECQTTGNPSPNV-TWLKSGSAVNTSVDPRFYSND-----TILMITNVSRIDSGTYSCN 843
Query: 73 ATNLAG 78
A+N G
Sbjct: 844 ASNELG 849
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 16 CEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGR-SVLTYMPVSDVDYGTLSCRAT 74
C V P P W + IR D+ RF+ E + G VLT V+ D G+ C AT
Sbjct: 2417 CRVTGKPRPQV-AWFKDDK--EIRQDS-RFSFETRPGDVCVLTIRGVTPDDEGSYKCIAT 2472
Query: 75 NLAGQ 79
N AGQ
Sbjct: 2473 NPAGQ 2477
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 36 GSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRATNLAG 78
G + D++R+ + + +LT + ++ D GT C TN AG
Sbjct: 4113 GEVIEDSKRYVIRQDDDLHMLTILGATEDDLGTYKCVVTNKAG 4155
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 18 VDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRATNLA 77
VD YP P +W N IR +F ++ L + G L+C+A N A
Sbjct: 2516 VDGYPKPE-IDWYKNDIL--IR-PGPKFDIKEHGDHHTLIVKDCRPEETGKLTCKARNSA 2571
Query: 78 GQQPMPCLYTLLPATRPDQPTNCTVYNLTDDS 109
GQ C + T P + T +++L+ D+
Sbjct: 2572 GQAICSCFVQINEKTIPPKITQ-RLHDLSIDA 2602
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 44 RFTVEVKEGRSVLTYMPVSDVDYGTLSCRATNLAGQ 79
RF +E ++ RSVLT + D G +C AT+ AG+
Sbjct: 3105 RFQIEFEKDRSVLTIIDAKLNDEGEYTCVATSKAGK 3140
>SB_8817| Best HMM Match : I-set (HMM E-Value=0)
Length = 2526
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 22 PPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRATNLAG 78
P PN F+WT + R + ++T E + R L S D GT C ATN G
Sbjct: 801 PEPN-FKWTKDDEDIDFR--SSQYTFERVDDRLTLIVKSPSPSDQGTYKCTATNKGG 854
>SB_56996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 31.9 bits (69), Expect = 0.63
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 52 GRSVLTYMPVSDVDYGTLSCRATNLAGQQPMPCLYTLLPATRPDQPTNCTV 102
G SVLT S+ DYG+ +CRA N G + +++ T P +P + ++
Sbjct: 67 GGSVLTVTTRSEQDYGSYTCRAVNSVGSHEH--VISVIQWTPPGKPESISM 115
>SB_59380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1226
Score = 31.1 bits (67), Expect = 1.1
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 15/112 (13%)
Query: 16 CEVD-AYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRAT 74
C+V AYP P+ W N G + V ++R V + G L V VD GT C A+
Sbjct: 206 CKVKKAYPAPS-ISWEHN---GQVIVPSKRHVV-LPNG--ALQIHNVQQVDQGTYQCVAS 258
Query: 75 NLAG-QQPMPCLYTLLPATRPDQPTNCTVYNLTDDSLDLACIAGYEGGLRCV 125
N+A ++ T+ A QP N T + + I+G E L C+
Sbjct: 259 NIARIRRSNTATLTVQQAKSSKQP------NFTTIPSNTSVISGEEAVLECI 304
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 9 QEPTKVICEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGT 68
+E + +C V P P T+EW + D R+T+ + L + D G
Sbjct: 4356 KETARFVCRVIGRPDP-TYEWLRGDKPIT---DGGRYTIMSDDEGQTLEITDCTVEDEGL 4411
Query: 69 LSCRATNLAGQQPMPCLYTLLPATRP 94
C +TN +G T+ + RP
Sbjct: 4412 YKCVSTNSSGTDTTTARLTVEASRRP 4437
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 1 MKMIGAALQEPTKVICEVDAYPPPNTFEWTLNSSAGSIRVDAERFTV-EVKEGRSVLTYM 59
++ + A E K + P P EW S + D ERFT+ E + L
Sbjct: 401 LRDVSALPGERVKFKVRIGGKPKPKV-EWRKGKS---VIEDGERFTIAEESDEVFSLIIQ 456
Query: 60 PVSDVDYGTLSCRATNLAGQ 79
+ + D G C ATN AG+
Sbjct: 457 DLEETDAGRYKCVATNEAGE 476
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 6/81 (7%)
Query: 16 CEVDAYPPPNTFEWTLNSSAGSIRV-DAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRAT 74
C + P P T EW N IRV D+ R ++ +G LT D G +C
Sbjct: 612 CTISGKPVP-TIEWLKNG----IRVKDSRRTKCDLVDGEVKLTIKTTRADDQGDYTCIVR 666
Query: 75 NLAGQQPMPCLYTLLPATRPD 95
N G ++ RP+
Sbjct: 667 NELGSAESKTKLKVIAFARPE 687
>SB_43700| Best HMM Match : SRCR (HMM E-Value=0)
Length = 967
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 18 VDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRATNLA 77
V PP +F W S + A R +V G L + PV D G SC A A
Sbjct: 710 VSGRPPATSFTWIKESQSFD---PATRPSVSTANGGRDLVFSPVDRRDQGMYSCVALGSA 766
Query: 78 G 78
G
Sbjct: 767 G 767
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 16 CEVDAYPPP-NTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRAT 74
C V++ P ++ W + + ++ A V + G L + PV D G +C AT
Sbjct: 894 CTVESSQPSVGSYTWLKDGAEINL---ATHPRVRAERGGRDLVFAPVGRADQGNYTCEAT 950
Query: 75 NLAGQQPMP 83
N G P
Sbjct: 951 NSVGSGTSP 959
>SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 48 EVKEGRSVLTYMPV-SDVDYGTLSCRATNLAGQQPMPCLYTLLPATRPDQPTN 99
+VK+ R++ ++ V SD D+G CRA+N G + L A PD PTN
Sbjct: 305 KVKD-RTITGHVTVTSDEDFGDYECRASNELGNATH--IVQLKQAGGPDSPTN 354
>SB_59087| Best HMM Match : ig (HMM E-Value=1.5e-27)
Length = 955
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 16 CEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRATN 75
C P P +W GS+ + VKEGR ++ M + D+G SC ATN
Sbjct: 680 CVSQGNPAP-VIQWYKIEMNGSVSLQTR-----VKEGRLLIDEM--REEDFGNYSCVATN 731
Query: 76 LAGQQPMPCLYTLLPATRP 94
G + T L + P
Sbjct: 732 SRGSDAVYLSITELESAEP 750
>SB_58150| Best HMM Match : ig (HMM E-Value=3.7e-24)
Length = 456
Score = 29.9 bits (64), Expect = 2.6
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 13 KVICEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCR 72
K+ C D P P +WT G + ER ++ LT + V D G +SC
Sbjct: 40 KLRCPSDGLPKPFV-KWT---RYGVRAMSNERQLID--SDSDTLTMVEVLPYDSGEVSCT 93
Query: 73 ATNLAGQQPMPCLYTLLPATRPDQPTNC-TVYNLTD 107
TNL G T+L P T+ TV +L++
Sbjct: 94 VTNLRGSDKKTSSITVLEPFAPSINTSDETVVSLSN 129
>SB_50016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2065
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 9 QEPTKVICEVDAYPPPNTF----EWTLNSSAGSIRVDAERFTVEVKEGRSV 55
++ T+VI D Y P F ++ ++ SAGS+RV+ +R ++ SV
Sbjct: 916 RQVTEVIISPDRYDEPQVFFMRPQYHVDESAGSVRVEIQRNGTDLTRSSSV 966
>SB_28333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 244 PPKRNSPHGQDDRNPDIIPLSKDDFLGNLDSVLSVWSYRGSLFGKR 289
PPK +SP G +DR+ +++ S+DDF G+ S+ S S R K+
Sbjct: 284 PPKYDSPFGVEDRSWEMV--SRDDF-GSSSSLSSKRSSRDEARSKK 326
>SB_24941| Best HMM Match : DPRP (HMM E-Value=1)
Length = 354
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 244 PPKRNSPHGQDDRNPDIIPLSKDDFLGNLDSVLSVWSYRGSLFGKR 289
PPK +SP G +DR+ +++ S+DDF G+ S+ S S R K+
Sbjct: 280 PPKYDSPFGVEDRSWEMV--SRDDF-GSSSSLSSKRSSRDEARSKK 322
>SB_33962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 823
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 16 CEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRATN 75
C P P +W GS+ + VKEGR ++ M + D+G SC ATN
Sbjct: 156 CVSQGNPAP-VIQWYKIEMNGSVSLQTR-----VKEGRLLIDEM--REEDFGNYSCVATN 207
Query: 76 LAGQQPMPCLYTLLPATRP 94
G + T L + P
Sbjct: 208 SRGSDAVYLSITELESAEP 226
>SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36)
Length = 1677
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 59 MPVSDVDYGTLSCRATNLAGQQPMPCLYTLLPATRPDQPTNCTVYNLTDDSLDLACIAGY 118
+P++ L C +T+L+ +QP + + +PD+ T C ++ S +++C GY
Sbjct: 180 IPINATGLPALPCNSTSLSAEQPDE---STVATMKPDKAT-CFLWKQETPSTEVSCPGGY 235
>SB_19226| Best HMM Match : I-set (HMM E-Value=0)
Length = 1500
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 11 PTKVICEVDAYPPPNTFEW---TLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYG 67
P ++ CEV A P P +W + + G + + S L+ VS D G
Sbjct: 672 PLQITCEVSAIPYPRDVQWYHDDIPLTGGHDYIITAMPGTKRSSRLSKLSRTAVSMADSG 731
Query: 68 TLSCRATNLAG 78
C A+N AG
Sbjct: 732 EYKCVASNAAG 742
>SB_26711| Best HMM Match : I-set (HMM E-Value=0)
Length = 327
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Query: 16 CEVDAYPPPNTFEWTLNSSAGSIRV-DAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRAT 74
C V A P P T EW + +RV + R + + + LT D D G+ C A
Sbjct: 246 CRVTASPAP-TVEWLRDG----VRVTEGRRIVAQYLDEVATLTINQARDTDMGSYKCVAR 300
Query: 75 NLAGQQPMPCLYTLLPATRPD 95
N G ++ ++PD
Sbjct: 301 NNFGDISTSAKLRVVVNSKPD 321
>SB_1586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 183 RLAPRTEAQAAWEVN-WAVGGALCFITVIGVIVCLAMTVFKLRNRARDYEVTIPSLKN 239
++ PR Q V W GGA+C V I+C +V L + D VT+ S N
Sbjct: 45 QIVPRYHLQDVLRVGEWVFGGAVCGFWVTTTILCGCASVLNLCVVSWDRYVTVTSPLN 102
>SB_33923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 16 CEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRATN 75
C P ++ W N G + R T+E +G+S L + + D G+ +C A N
Sbjct: 25 CVATGIYPTQSYAWLHN---GKPLNASGRITIETFDGKSSLEVINATREDSGSYACVAEN 81
Query: 76 LAG 78
+ G
Sbjct: 82 IKG 84
>SB_55856| Best HMM Match : TPR_2 (HMM E-Value=4.1e-14)
Length = 742
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 216 LAMTVFKLRNRARDYEVTIPSLKNQKVLPPKRNSPHGQDDRNPDIIP 262
LA +LRN + +V I +L+ +KV P +R+S + N ++P
Sbjct: 49 LAELYLRLRNYDKSEKVIITALEQEKVCPVQRDSLLNDFEDNKFVLP 95
>SB_46018| Best HMM Match : I-set (HMM E-Value=0.025)
Length = 1122
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 16 CEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDV-DYGTLSCRAT 74
C ++ P T++W LN SIR + +T + +G ++ + + + D G C A+
Sbjct: 935 CAAESILQPLTYKWLLNGQLLSIRSNG-NYTWQGYQGNLLIPSLRQNSLNDGGLFQCTAS 993
Query: 75 NLAG 78
N G
Sbjct: 994 NPLG 997
>SB_49916| Best HMM Match : ig (HMM E-Value=8.5e-06)
Length = 465
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 249 SPHGQDDRNPDIIPLSKDDFLGNLDSVLSVWSYRGS 284
+P+ D NP+I SKD + DS+ SV S GS
Sbjct: 349 NPYASADHNPEITT-SKDSIYASADSLASVQSTPGS 383
>SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1384
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 14 VICEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRA 73
+IC P P+ W +N++ ++R RF V+ EG LT + D G + C A
Sbjct: 706 IICPTRGLPAPDV-TWEMNNT--NVRPGG-RFVVQ--EG--TLTIRNLVKQDQGNIRCVA 757
Query: 74 TNLAGQ 79
N AGQ
Sbjct: 758 RNAAGQ 763
>SB_58921| Best HMM Match : DUF286 (HMM E-Value=4.9)
Length = 352
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 104 NLTDDSLDLACIAGYE--GGLRCVYVLEVWTNE-GLLVN 139
+L ++LD +CI+ YE G + +Y+ +WTN LL N
Sbjct: 149 SLLTNALDQSCISTYERSGPIVYLYLQTIWTNRVSLLTN 187
>SB_30548| Best HMM Match : I-set (HMM E-Value=2.1e-11)
Length = 203
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 14 VICEVDAYPPPNTFEWTLNSSAGSIRVDAERFTVEVKEGRSVLTYMPVSDVDYGTLSCRA 73
+IC P P+ W +N++ ++R RF V+ EG LT + D G + C A
Sbjct: 19 IICPTRGLPAPDV-TWEMNNT--NVRPGG-RFVVQ--EG--TLTIRNLVKQDQGNIRCVA 70
Query: 74 TNLAGQ 79
N AGQ
Sbjct: 71 RNAAGQ 76
>SB_12991| Best HMM Match : TP2 (HMM E-Value=1.4)
Length = 296
Score = 28.3 bits (60), Expect = 7.8
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 5/99 (5%)
Query: 186 PRTEAQAAWEVNWAVGGALCFITVIGVIVC---LAMTVFKLRNRARDYEVTIPSLKNQKV 242
P E+ +AW + +G A +++IG+ LA T F R A T P + V
Sbjct: 164 PVPESNSAWSASSVIGVAGLLVSLIGLYTRRRELAATAF-TRTPAVKQRATDPLVVTDHV 222
Query: 243 LPPKRNSPHGQDDRNPDIIPLSKDDFLGNLDSVLSVWSY 281
PP R P + P P + G S L Y
Sbjct: 223 TPPAR-PPLAAAQQPPLAYPTGQASRPGQCKSRLLAMDY 260
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.135 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,883,994
Number of Sequences: 59808
Number of extensions: 388093
Number of successful extensions: 995
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 953
Number of HSP's gapped (non-prelim): 82
length of query: 292
length of database: 16,821,457
effective HSP length: 82
effective length of query: 210
effective length of database: 11,917,201
effective search space: 2502612210
effective search space used: 2502612210
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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