Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001044-TA|BGIBMGA001044-PA|IPR002048|Calcium-binding
EF-hand
         (171 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.2  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 9/66 (13%)

Query: 76  NCFRSFDRDNSGNIDRVELKNALTAFGYRLSDDVVGIMVQKFDRFGRGTILFDDFIQCCV 135
           N FR+        I+ +E  N +  +   +SD   GI+V +F         F   +  C+
Sbjct: 216 NGFRNVAESRKIFIECIEQYNVILRYTKIVSDTYQGILVVQF---------FCSLVALCL 266

Query: 136 TLYTLT 141
           T+Y L+
Sbjct: 267 TMYKLS 272


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 120 FGRGTILFDDFIQCCVTLYTLTSAF 144
           F R  I+F     C  +LY L S F
Sbjct: 301 FCRAFIIFPTHFYCAFSLYPLKSTF 325


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 59  ISFEDFGALWKYVSDWQNCFRSFDR 83
           +S E +   +K V  W+N    +DR
Sbjct: 321 VSSEIYNVEYKNVEFWRNIREDYDR 345


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.141    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,676
Number of Sequences: 317
Number of extensions: 1673
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 171
length of database: 114,650
effective HSP length: 53
effective length of query: 118
effective length of database: 97,849
effective search space: 11546182
effective search space used: 11546182
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 40 (20.2 bits)