GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001044-TA|BGIBMGA001044-PA|IPR002048|Calcium-binding
EF-hand
         (171 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    41   2e-05
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        23   6.7  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 41.1 bits (92), Expect = 2e-05
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 15/109 (13%)

Query: 10  IFRSVDKDRSGYISADELQQALSNGTWNPFNPETVRLMIGMFDKQNRGV--ISFEDFGAL 67
           +F   D + SG + A +L  AL     NP    T+ L+  M   Q RG   I FE+F  +
Sbjct: 16  VFSVYDWEGSGQMDAMDLGNALRALNLNP----TIELIGKMGGTQKRGEKKIKFEEFLPI 71

Query: 68  WKYVS---------DWQNCFRSFDRDNSGNIDRVELKNALTAFGYRLSD 107
           +  V          D+  C + +D++  G +   EL ++LTA G RL D
Sbjct: 72  FSQVKKEKEQGCFEDFLECLKLYDKNEDGTMLLAELTHSLTALGERLDD 120


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query: 54 QNRGVISFEDFGALWKYVSDW 74
          QNR  + +E F   W    DW
Sbjct: 30 QNRFTVDYEPFAGPWNDDFDW 50


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.326    0.141    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,902
Number of Sequences: 2123
Number of extensions: 7782
Number of successful extensions: 62
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60
Number of HSP's gapped (non-prelim): 2
length of query: 171
length of database: 516,269
effective HSP length: 60
effective length of query: 111
effective length of database: 388,889
effective search space: 43166679
effective search space used: 43166679
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)