GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001043-TA|BGIBMGA001043-PA|IPR001196|Ribosomal protein
L15
         (138 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   0.91 
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   4.9  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   4.9  
AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    22   6.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    22   6.4  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    22   8.5  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 18  HPGGRGNAGGEHHHRINMDKYH 39
           H GG   A G HHH+ +   +H
Sbjct: 712 HHGGAAAATGHHHHQHHAAPHH 733


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)

Query: 25  AGGEHHHRINMDKYHPGYFG 44
           A   HHH  +   +HPG  G
Sbjct: 153 AAAMHHHHHHPHHHHPGLTG 172


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 14/50 (28%), Positives = 24/50 (48%)

Query: 39  HPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKV 88
           HP     +  R+    K++NF   + L  L+TL     RL Y +A + ++
Sbjct: 264 HPNGRNGILRRSSMSMKDRNFFINITLFALFTLSLRYDRLLYRTAGENRM 313


>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 30  HHRINMDKYHPGYFGK--LGMRNFHFR 54
           +HRI +D+ H   FG+    MR+  +R
Sbjct: 111 NHRIQLDENHDPLFGRALFAMRDTRWR 137


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 17  KHPGGRGNAGGEHHHRINMDKYHPGY 42
           K    RGNA  EH  R+N+   + G+
Sbjct: 131 KSTNARGNAVLEHFSRLNLVLVNVGF 156


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query: 16  RKHPGGRGNAGGE 28
           RK PGG G  GG+
Sbjct: 298 RKAPGGGGGGGGK 310


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.140    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,457
Number of Sequences: 2123
Number of extensions: 5533
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 8
length of query: 138
length of database: 516,269
effective HSP length: 58
effective length of query: 80
effective length of database: 393,135
effective search space: 31450800
effective search space used: 31450800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)