GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001041-TA|BGIBMGA001041-PA|IPR000873|AMP-dependent
synthetase and ligase, IPR002372|Pyrrolo-quinoline quinone,
IPR011047|Quinonprotein alcohol dehydrogenase-like, IPR009081|Acyl
carrier protein-like, IPR006163|Phosphopantetheine-binding
         (758 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    24   3.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    24   3.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   5.9  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   7.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   7.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   7.7  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 14/51 (27%), Positives = 22/51 (43%)

Query: 335 TICNKLSLTFPEVGKHILPHLLSHNKSIGDVLKTITQDTNCLENKFKKSIK 385
           T C+K S T     K I+ HL+ H +   + L+           K++  IK
Sbjct: 73  TECSKCSETQKNGSKKIMRHLIDHKRDWWNELEEKYDKEGEYRKKYEAEIK 123


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 278 KEILVNIYKKSNILQNVENIKSYLFKELKALVNKDLNYEDLQSKSFFSLGGTSFLAV 334
           +E+   +     I Q   N K  + + +  ++N   NY D  +  FFS+  T+ L +
Sbjct: 276 EEVKTTLLLAYKIRQVFPNEKKNISEFINVVLN---NYPDFSAAGFFSINKTTLLQI 329


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 352 LPHLLSHNKSIGDVLKTITQDTNCLENKFKKS--IK-RNRSTSSHGENSISYKKGAG 405
           +P +L  N  + ++   +T+DT+ L+N+ + +  +K +N + S  G   I+ K   G
Sbjct: 580 IPSILQFNDGLKNLEIHVTKDTDTLDNEMRGAWPLKLQNLTLSGKGLKKITGKMFQG 636


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 477 CVHDECVTSPCGVVGTYDGTVICFLLENCSVIWQINVG 514
           C ++      CG    +D +   FL ENC  I  ++ G
Sbjct: 44  CDNNVAELKTCGNGLAFDASDPKFLTENCDYIHNVDCG 81


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 477 CVHDECVTSPCGVVGTYDGTVICFLLENCSVIWQINVG 514
           C ++      CG    +D +   FL ENC  I  ++ G
Sbjct: 44  CDNNVAELKTCGNGLAFDASDPKFLTENCDYIHNVDCG 81


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 480 DECVTSPCGVVGTYD 494
           +EC+++PC   GT D
Sbjct: 300 NECLSNPCSNAGTLD 314


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.135    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,158
Number of Sequences: 317
Number of extensions: 8297
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 6
length of query: 758
length of database: 114,650
effective HSP length: 62
effective length of query: 696
effective length of database: 94,996
effective search space: 66117216
effective search space used: 66117216
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)