Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001041-TA|BGIBMGA001041-PA|IPR000873|AMP-dependent
synthetase and ligase, IPR002372|Pyrrolo-quinoline quinone,
IPR011047|Quinonprotein alcohol dehydrogenase-like, IPR009081|Acyl
carrier protein-like, IPR006163|Phosphopantetheine-binding
(758 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1827.03c |||acetyl-CoA ligase |Schizosaccharomyces pombe|chr... 54 7e-08
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 37 0.012
SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces... 36 0.016
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 32 0.34
SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr 1||... 31 0.45
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 31 0.59
SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2 |Schizosacch... 31 0.78
SPAC2G11.13 |atg22||autophagy associated protein Atg22 |Schizosa... 31 0.78
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 30 1.0
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 30 1.0
SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein Rrp12|Sch... 30 1.4
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 29 2.4
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 29 3.2
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 27 7.3
SPCC306.06c |||ER membrane protein, BIG1 family |Schizosaccharom... 27 9.6
SPAC212.03 |||hypothetical protein|Schizosaccharomyces pombe|chr... 27 9.6
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 27 9.6
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 27 9.6
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 27 9.6
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 27 9.6
>SPCC1827.03c |||acetyl-CoA ligase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 54.0 bits (124), Expect = 7e-08
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 157 LNRKNGNKEE-NSIKFIDTGDIGEI-RNGTVFYRGRVDDTIKRFGHKINLHSIESTVMQC 214
LN NK +F TGD G++ ++G VF GR+ + + R G KI+ I++ +MQ
Sbjct: 368 LNNPAANKSSFTKDRFFRTGDEGKLDKDGYVFITGRIKELVNRGGEKISPAEIDAVLMQH 427
Query: 215 PRVRSCSCV------WLQTPLLLIVYFSAETLSSQELLDFLKCKLDEKYWPDKVIRVDTL 268
P V C + Q I + +T++ ++L D+L+ K+ P K D +
Sbjct: 428 PDVSEAVCFAVPDEKYGQDIQAAINPVAGKTVTPKQLHDYLEQKVAAFKIPKKFYFTDRI 487
Query: 269 PTNAHGKTSKEILVNIY 285
P A GK + ++ + +
Sbjct: 488 PKTATGKVQRRLVCDAF 504
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 36.7 bits (81), Expect = 0.012
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 166 ENSIKFIDTGDIGEIRNGTVFYRGRV--DDTIKRFGHKINLHSIESTVMQCPRVRSCSCV 223
E ++ TGD+G I NG ++ GR+ D IK G +I + IES + P V S +
Sbjct: 587 EQTLSIYRTGDLGRIINGKLYIFGRIAGDMQIKIRGRRIEIGEIESKL--APSVDSLAIE 644
Query: 224 WLQTPLLLIVYFSAETLSSQELLDFLKCKLDEKYWPDKVIRVDTLPTNAHGKTSKEIL 281
+ L+ ++ + + +L + L P K + + P A GKT ++ L
Sbjct: 645 KIGDN--LVAFYVGDEM---KLRKHAESHLASWMCPTKYVGLPGFPRLASGKTDRKAL 697
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 174 TGDIGEIR--NGTVFYRGRVDDTIKRFGHKINLHSIESTV 211
TGD+G + N ++ + GR DD IK G +I + I + +
Sbjct: 3098 TGDLGRLLKDNNSLEFCGRTDDQIKLRGQRIEIGEINAVI 3137
>SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 662
Score = 36.3 bits (80), Expect = 0.016
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 13/125 (10%)
Query: 171 FIDTGDIGEIRN--GTVFYRGRVDDTIKRFGHKINLHSIESTVMQCPRVRSCSCVWLQTP 228
F TGD G R+ G ++ RGRVDD + GH+++ IE+ ++ V + V +
Sbjct: 505 FYFTGD-GATRDKDGYIWIRGRVDDVVNISGHRLSTAEIEAALLSHDAVAESAVVGVHDE 563
Query: 229 L---------LLIVYFSAETLSSQELLDFLKCKLDEKYWPDKVIRVDTLPTNAHGKTSKE 279
L LL + A +EL+ ++ + P K+I D LP GK +
Sbjct: 564 LTGQAVNAFILLKPGYEATVELEKELIMAVRSTIGPFASPRKLIFSD-LPKTRSGKIMRR 622
Query: 280 ILVNI 284
IL I
Sbjct: 623 ILRKI 627
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 31.9 bits (69), Expect = 0.34
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 174 TGDIGE-IRNGTVFYRGRVDDTIKRFGHKINLHSIESTVMQCPRVR 218
+GD+G + G V GR DD IK G +I L I + + + P VR
Sbjct: 723 SGDLGRYLPTGNVECSGRADDQIKIRGFRIELGEINTHLSRHPNVR 768
Score = 30.3 bits (65), Expect = 1.0
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 244 ELLDFLKCKLDEKYWPDKVIRVDTLPTNAHGKTSKEIL-------VNIYKKSNILQNVEN 296
++ ++LK KL P ++ + +P N +GK K L + +S+ V+
Sbjct: 821 DIREYLKTKLPSYAIPSVIVPLHKMPLNPNGKIDKPALPFPDTSQLAAASRSHSKHGVDE 880
Query: 297 IKSYLFKELKALVNKDLNY-EDLQSK-SFFSLGGTSFLAVTICNKLSLTF 344
+ ++++ + + + + D+ K SFF +GG S LA + +L F
Sbjct: 881 TLTATERDIRDIWLRIIPHATDVNKKASFFDIGGHSILATRLIFELRKKF 930
>SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1101
Score = 31.5 bits (68), Expect = 0.45
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 268 LPTNAHGKTSKEILVNIYKKSNI----LQNVENIKSYLFKELKALVNKDLNYEDLQSKSF 323
LP K+SK++L +Y+ + + L + + S E +A+++ DLN+ED+ K F
Sbjct: 258 LPLRDLAKSSKKLL-GLYELNTLFPPCLNKLIQLNSAFLDEFEAIMS-DLNFEDIDEKKF 315
Query: 324 FSLGGTSFLAVTICNKLSLTFPEVGKHILPHLLSHNKSIGDVLKTITQDTNCLENKFKKS 383
+ L + C F +H P L + G+VLK ++ +E F
Sbjct: 316 EEID----LRLACC--FESHFFAFSQH-YPRYLEQSNDFGNVLKMASKIPKFVE--FHDQ 366
Query: 384 IKRN 387
+K N
Sbjct: 367 VKLN 370
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 31.1 bits (67), Expect = 0.59
Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 19/192 (9%)
Query: 529 YIASYDGNIRCIDILTSTIKETVHVSDQA-ISADLVLAKNEFILFGTLSGVCACLHVNTK 587
+ +++G + C+ + + K + D+ I ++ + LFG S +C+ +N++
Sbjct: 51 FYENHEGFVNCVCYVPAIDKNSRGGQDKCGILQEVGTNSPSYYLFGHESNICSASALNSE 110
Query: 588 TII---WQGSLK-GPIFACPVLYDNDKYVIFAEVN-GE--IHCRTVEKGIKIWTYNG--- 637
TII W + + + C + + ++A + GE + +K IKIW NG
Sbjct: 111 TIITGSWDSTARVWALGQCKYVLKGHQSSVWAVLALGEDIFITGSADKLIKIW--NGEKL 168
Query: 638 AKGNIFSSLCVKEINKFKWQMYFGCHDNNVYSVNITN--FQPSLHWKTRVSSPVYSTPTI 695
K + + CV+ + + + C ++ V + ++ F LH T S VYS I
Sbjct: 169 VKSILAHNDCVRSLCQIPGG-FASCSNDGVIKLWTSDGEFLYELHGHT---SFVYSLTYI 224
Query: 696 FNDKLILAASTD 707
N +LI + D
Sbjct: 225 HNQQLIASCGED 236
>SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 30.7 bits (66), Expect = 0.78
Identities = 14/40 (35%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 265 VDTLPTNAHGKTSKEILVNIYKKSNILQNVENIKSYLFKE 304
VD+LPT+ H K S +IL +++ +++L ++ + +YL K+
Sbjct: 880 VDSLPTSKHIKNSNDILSSVFTINDML--IDEMTAYLSKK 917
>SPAC2G11.13 |atg22||autophagy associated protein Atg22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 30.7 bits (66), Expect = 0.78
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 217 VRSCSCVW--LQTPLLLIVYFSAETLSSQELLDFLKCKLDEKY 257
V CSC W L TPL IV E SS +L L + E Y
Sbjct: 275 VTVCSCWWLILSTPLCTIVTLPVENHSSDAILTLLYNSVKESY 317
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 243 QELLDFLKCKLDEKYWPDKVIRVDTLPTNAHGKTSKEILVNIYKKSNILQNVENIKS--Y 300
+EL LK ++ + + L + H S IYK +LQN E +KS Y
Sbjct: 1774 EELFSSLKSSEEDFALRTRCVTSLMLVNSKHPSMSALCRFIIYKSVTMLQNGEVLKSGDY 1833
Query: 301 LFKELKALVNKDLNYEDLQSKSFFSL 326
+ + + AL++ ++ + + KSF S+
Sbjct: 1834 VTEFIPALLDMHVHIPEEKKKSFLSM 1859
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 272 AHGKTSKEILVNIYKKS---NILQNVENIKSYLFKELKALVNKDLNYEDLQSKS 322
AHGK K IL K+S N QNV N+ S E +AL+ ++ N E+L S S
Sbjct: 10 AHGKPKKVILSLSLKESSKINDSQNVSNVSSKEKCETEALLREE-NKENLSSDS 62
>SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein
Rrp12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1001
Score = 29.9 bits (64), Expect = 1.4
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Query: 279 EILVNIYKKSNILQ----NVENIKSYLFKELKALVNKDLNYEDL--QSKSFFSLGGTSFL 332
+ V++ K N+ Q N N+ L L + N D N EDL + S FS+ G L
Sbjct: 537 QAFVDLTKIENVRQLISSNSSNLIGVLGNTLATMKNDDSNAEDLVMAATSIFSVAGDQQL 596
Query: 333 AV--TICNKLSLTFPEVGK----HILPHLLS 357
+ +C L+ P +G + P LLS
Sbjct: 597 QIITNLCESAPLSEPSLGSTGVIKLFPALLS 627
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 651 INKFKWQMYFGCHDNNVYSVNITNFQPSLHWKTRVSSPVYSTPTIFNDKLILAASTDGKL 710
I F + FG H N + ++ +P L + T SP Y+ P + N K + A T +
Sbjct: 639 IADFGFATTFG-HFNTLSEHSLPTEKPDL-FSTSCGSPCYAAPELVNCKSGMYAGTQADI 696
Query: 711 W 711
W
Sbjct: 697 W 697
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 541 DILTSTIKETVHVSDQAISADLVLAKNEF 569
D++ + I+E +HVS++ + DL +A+ E+
Sbjct: 176 DVINANIQEAIHVSEEFRNWDLEMAEKEY 204
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 27.5 bits (58), Expect = 7.3
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 12/72 (16%)
Query: 633 WTYNGAKGNIFSSLCVKEINKFKWQMYFGCHDNNVYSVNITNFQPSLHWKTRVSSPVYST 692
+TY G +G SL V N +Y G +D +V S + +KTR+ S
Sbjct: 274 YTYTGHRGKHIWSLVVSSANPI---IYTGGNDGSVRSWD---------YKTRIQESCISV 321
Query: 693 PTIFNDKLILAA 704
++F K +LA+
Sbjct: 322 SSLFTSKTLLAS 333
>SPCC306.06c |||ER membrane protein, BIG1 family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 311
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 223 VWLQTPLLLIVYFSAETLSSQELLDFLKCKLD 254
V LQ+P L++ +S E+L SQEL+ K D
Sbjct: 88 VSLQSPYSLLLPYSKESLDSQELVHSAKQNCD 119
>SPAC212.03 |||hypothetical protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 129
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 85 NNKTRIFTLYGVTEMSCWASVAELDLNKVTTGDKEVPLGNCLSETELFVQPHEKNNT-MG 143
NN+ F Y + C +S+ ++ +T NC S + + Q ++ NT +G
Sbjct: 50 NNRNLAFKAYDAVKQKCDSSIKVFNIQDITIKGATWQHHNCQSTGKWYSQLYDYQNTFIG 109
Query: 144 K 144
K
Sbjct: 110 K 110
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 519 SKATYCKGVLYIASYDGNIRCIDILTSTIKETVHVSDQAISADLVLAKNEFIL 571
S AT G + +AS G+IR D + K + +AI V A +F+L
Sbjct: 585 SAATTENGYIAVASNKGDIRLFDRIGVNAKTALPALGEAIIGVDVTASGDFVL 637
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1115
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 426 CVDASPALYKSESVLYVTVGSHSGKIVVMNANTG 459
C+D Y+S + V +G + K+ V+NA G
Sbjct: 126 CIDYRAMFYQSRNNPEVVIGGYHQKLTVVNAERG 159
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 27.1 bits (57), Expect = 9.6
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 569 FILFGTLSGVCAC--LHVNTKTIIWQGSLKGPIFACPVLYDNDKYVIFAEVNGEIHCRTV 626
++L G+ C +H ++ G + P+ A + D + A+ G IH +
Sbjct: 477 YVLTGSSDKTCRLWDVHRGHSVRVFNGHTQ-PVTAVAIAPDGHT-MASADSEGLIHLWDI 534
Query: 627 EKGIKIWTYNGAKGNIFS 644
G +I T G +GNI+S
Sbjct: 535 GTGRRIKTMRGHRGNIYS 552
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 27.1 bits (57), Expect = 9.6
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 444 VGSHSGKIVVMNANTGFIQGLIKLKSR-IEAPILCVH-DECV-TSPCGVVGTYDGTVICF 500
+G SGK+ V+N N+ I ++ ++ +EA LC C S G V YD + F
Sbjct: 260 LGGSSGKVKVVNINSSHILASLEAQTESVEAIALCTALPICACASVDGTVALYDSASLKF 319
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,671,775
Number of Sequences: 5004
Number of extensions: 165428
Number of successful extensions: 433
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 412
Number of HSP's gapped (non-prelim): 31
length of query: 758
length of database: 2,362,478
effective HSP length: 78
effective length of query: 680
effective length of database: 1,972,166
effective search space: 1341072880
effective search space used: 1341072880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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