BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001039-TA|BGIBMGA001039-PA|IPR000301|CD9/CD37/CD63 antigen, IPR008952|Tetraspanin (249 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 8e-15 SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13 SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 64 1e-10 SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09 SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 58 9e-09 SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06 SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 50 2e-06 SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04 SB_47462| Best HMM Match : Ras (HMM E-Value=0) 44 2e-04 SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13) 42 4e-04 SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 42 5e-04 SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 41 8e-04 SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 40 0.003 SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 40 0.003 SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 38 0.010 SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13 SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13 SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10) 33 0.29 SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08) 32 0.39 SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 31 0.90 SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08) 31 1.2 SB_52414| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1 SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2) 30 2.1 SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1 SB_5369| Best HMM Match : wnt (HMM E-Value=2.9e-18) 29 3.6 SB_38920| Best HMM Match : Tetraspannin (HMM E-Value=3.5e-07) 29 4.8 >SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 514 Score = 77.8 bits (183), Expect = 8e-15 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 15/148 (10%) Query: 104 LSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDRELYASVPYY 163 +S GCCGA KE +C+L T++ +V+R KV L +++ ++ Y Sbjct: 339 VSFFGCCGAIKEHRCLLATFFALLFIILAVEITGTALGYVYRNKVEEQLGKDMNDTIVSY 398 Query: 164 GVKHE--YTKSWDDTQTYLQCCGVKSPNDW---------HGNLPESCCREAYPGKRIDCK 212 G K + T ++D Q +CCG+ DW H +P+SCC+ G I+ K Sbjct: 399 GEKGKEGITDAYDAIQKKEKCCGINGFKDWQRSYYTKGNHSIVPDSCCKTVSKGCGINFK 458 Query: 213 SNQNPTTIYVDGCLDKVIEFLREDAVYV 240 N IY GC D V L+++ + + Sbjct: 459 END----IYTKGCFDTVKTLLKDNLIII 482 >SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 341 Score = 72.1 bits (169), Expect = 4e-13 Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 12/130 (9%) Query: 104 LSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDRELYASVPYY 163 ++ LGCCGA KE KCML+ ++ + ++K+ LD+++ ++ Y Sbjct: 67 VAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGGALAYNNKDKIENRLDKDILKAIENY 126 Query: 164 GVKHEYTKSWDDTQTYLQCCGVKSPNDWHGNL--------PESCCREAYPGKRIDCKSNQ 215 K+E KS +D QT +CCG + DW N+ P+SCC+ G + + Sbjct: 127 PGKNE--KSINDMQTKFKCCGADNYTDWQSNIKMKNSSSVPDSCCKSEKAGCGVG--GVK 182 Query: 216 NPTTIYVDGC 225 +P IY GC Sbjct: 183 DPKDIYTKGC 192 Score = 41.1 bits (92), Expect = 8e-04 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 10/75 (13%) Query: 174 DDTQTYLQCCGVKSPNDWHG--------NLPESCCREAYPGKRIDCKSNQNPTTIYVDGC 225 DD Q ++CCG+ + DW N+P+SCC K + PT IY +GC Sbjct: 243 DDMQKTVKCCGITTYEDWKSSDNLGLTDNVPDSCCTTV--EKDCGMGQRKTPTRIYKEGC 300 Query: 226 LDKVIEFLREDAVYV 240 K+ + + + V V Sbjct: 301 YMKIKKDIDNNLVAV 315 >SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) Length = 252 Score = 63.7 bits (148), Expect = 1e-10 Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 20/207 (9%) Query: 44 RCMKFSLICINVITXXXXXXXXXXXXWVWTSRSFS----STLMSNNMFIASXXXXXXXXX 99 +C+KF + N++ W+ +S+ S L + + Sbjct: 8 KCIKFMVFFFNLLFLLAGCAIFAIGVWIISSKDEVAGDYSRLTGTINYKTAPILCIVIGI 67 Query: 100 XXXXLSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDRELYAS 159 ++ L CCGA KE +CML TY+ +V+RE++ L ++ ++ Sbjct: 68 VTVIVAFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEKNLHGDIRST 127 Query: 160 VPYYGVK-HE-YTKSWDDTQTYLQCCGVKSPNDW--------HGNL-PESCCREAYPGKR 208 + Y + H+ T++ D+ +CCG DW H ++ P SCC++ K Sbjct: 128 MNEYHLSGHDAVTRAIDEIHRDFKCCGNAQYRDWFETKWAKTHPDMVPRSCCKDPSDSK- 186 Query: 209 IDCKSN--QNPTTIYVDGCLDKVIEFL 233 C N ++PT IY GC V ++L Sbjct: 187 --CNENISKDPTKIYRRGCYMFVKKYL 211 >SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 313 Score = 58.0 bits (134), Expect = 7e-09 Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 3/165 (1%) Query: 37 GAMDSCGRCMKFSLICINVITXXXXXXXXXXXXWVWTSRSFSSTLMSNNMFIASXXXXXX 96 G D C+K+SL INVI +++ T +++ F Sbjct: 51 GQPDDPSLCVKYSLFTINVIFWLAGAVILAVGIFIFIEMKEEITKLADLNF-QPAVIFLA 109 Query: 97 XXXXXXXLSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDREL 156 +++ GC GA +E +C+L Y F +++ + T + +L Sbjct: 110 LGGLLFVITIFGCIGALRENRCLLTAYIWMCGIILAGMIVCGGLGFYYKDVLETKVTAQL 169 Query: 157 YASVPYYG--VKHEYTKSWDDTQTYLQCCGVKSPNDWHGNLPESC 199 ++ Y K + D QT LQCCGV+ NDW N+ +C Sbjct: 170 KDAIVLYRDPTKGDLHLIIDTVQTELQCCGVQGLNDWDANIYFNC 214 >SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) Length = 642 Score = 57.6 bits (133), Expect = 9e-09 Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 9/126 (7%) Query: 82 MSNNMFIASXXXXXXXXXXXXXLSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQ 141 +S+N F++ ++ GCCGA KE KCML+ ++ Sbjct: 398 ISSNDFMSGSRLLIAVGCIITIIAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLG 457 Query: 142 FVFREKVLTTLDRELYASVPYYGVKHEYTKSWDDTQTYLQCCGVKSPNDW--HGNL---- 195 ++ ++K+ + L ++ ++ Y ++ + D Q +CCG K P+DW +G + Sbjct: 458 YINKDKIQSDLTDDIIRNIKEYPKNNK--AAIDAMQMDFECCGAKGPSDWTFYGQMKYKA 515 Query: 196 -PESCC 200 P SCC Sbjct: 516 GPGSCC 521 >SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 333 Score = 49.6 bits (113), Expect = 2e-06 Identities = 27/96 (28%), Positives = 39/96 (40%) Query: 104 LSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDRELYASVPYY 163 L GC GA +E C+L + FVF++KV + +L +V Y Sbjct: 60 LGFSGCIGALRENICLLKFFSVVLAIIFFLQLALGVFVFVFQDKVEAVIVEKLQTAVTKY 119 Query: 164 GVKHEYTKSWDDTQTYLQCCGVKSPNDWHGNLPESC 199 + D Q +CCG K NDW N+ +C Sbjct: 120 RDNADLQNLIDGVQQEFKCCGAKGINDWDKNIYFNC 155 >SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) Length = 299 Score = 49.6 bits (113), Expect = 2e-06 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 29/226 (12%) Query: 40 DSCGRCMKFSLICINVITXXXXXXXXXXXXWVWTSRSFSSTLMSNNMFIASXXXXXXXXX 99 D+ C+K+ L +NV+ ++ T F + +++ Sbjct: 33 DAPSTCIKYILFFVNVVFWVFGVLILVIGSYLMTE--FKNAWNLDSILYEPSVVILIVGI 90 Query: 100 XXXXLSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDREL-YA 158 ++ +GC GA +E +L Y ++ R+KV+ L +L + Sbjct: 91 LLFLIATVGCIGALRENTILLAIYGGAVTLCLILLVSAGTAVYIHRDKVVAKLKDDLQHY 150 Query: 159 SVPYYGVKHEYTKSWDDTQTYLQCCGVKSPNDWHGN--------------LPESCCREA- 203 P K + D QT L+CCG+ S NDW N +P SCC+E+ Sbjct: 151 RDPD---KENFQFLIDRLQTNLKCCGINSYNDWQTNVYFNCSSPGSESCGVPFSCCKESI 207 Query: 204 -------YPGKRIDCKSNQNPTTIYVDGCLDKVIEFLREDAVYVVL 242 Y R+ + + +Y GC I F+ D +Y+V+ Sbjct: 208 QLNRQCGYDAGRMKTDAERLEKGVYSKGCWKTAISFIM-DNLYLVI 252 >SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 296 Score = 44.0 bits (99), Expect = 1e-04 Identities = 47/225 (20%), Positives = 82/225 (36%), Gaps = 28/225 (12%) Query: 40 DSCGRCMKFSLICINVITXXXXXXXXXXXXWVWTSRSFSSTLMSNNMFIASXXXXXXXXX 99 D+ C+K+ L +NV+ ++ T F + +++ Sbjct: 33 DAPSTCIKYILFFVNVVFWVFGVLILVIGSYLMTE--FKNAWNLDSILYEPSVVILIVGI 90 Query: 100 XXXXLSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDREL-YA 158 ++ +GC GA +E +L Y ++ ++KV+ L +L + Sbjct: 91 LLFLIATVGCIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYMHQDKVVEKLKDDLKHY 150 Query: 159 SVPYYGVKHEYTKSWDDTQTYLQCCGVKSPNDWHGNL--------------PESCCREA- 203 P K + D QT L+CCGV S DW N+ P SCC+E+ Sbjct: 151 RDPD---KENFQFLIDRLQTNLKCCGVNSYTDWQTNIYFNCSSPGSESCGVPFSCCKESI 207 Query: 204 -------YPGKRIDCKSNQNPTTIYVDGCLDKVIEFLREDAVYVV 241 Y R+ + + +Y GC I F+ ++ VV Sbjct: 208 QLNRQCGYDAGRMKTDAERLEKGVYSKGCWTIAISFIMDNLYLVV 252 >SB_47462| Best HMM Match : Ras (HMM E-Value=0) Length = 385 Score = 43.6 bits (98), Expect = 2e-04 Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 40/183 (21%) Query: 71 VWTSRSFSSTL-MSNNMFIASXXXXXXXXXXXXXLSLLGCCGAAKEVKCMLLTYYXXXXX 129 +W FS + +S++ + + + +GCCGA KE C+L T Sbjct: 196 IWARIQFSDYMKLSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT------- 248 Query: 130 XXXXXXXXXXXQFVFREKVLTTLDRELYASVPYYGVKHEYTKSWDDTQTYLQCCGVKSPN 189 + + LD L P G K +W+D Q L+CCG ++ Sbjct: 249 --------------IKTGLSDGLDTAL-KDYPEQGFKD----AWNDMQKNLKCCGSRNYT 289 Query: 190 DW-----------HGNLPESCCREAYPGKRIDCKSNQNPTTIYVD-GCLDKVIEFLREDA 237 DW +G++PESCC++ K + + +P TI + GC +++ + Sbjct: 290 DWFMVAWAGPNTKNGSVPESCCKDT-KVKSCNLEVLSHPETINSEQGCYGAAVKYFEDKL 348 Query: 238 VYV 240 V + Sbjct: 349 VII 351 >SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13) Length = 174 Score = 42.3 bits (95), Expect = 4e-04 Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 13/70 (18%) Query: 170 TKSWDDTQTYLQCCGVKS-PNDWHGN--------LPESCCREAYPGKRIDCKSNQ--NPT 218 T+ D Q LQCCG S PNDW N +P+SCC++ Y K DC Q T Sbjct: 84 TRVVDSIQERLQCCGADSGPNDWMNNKHFLQSASVPDSCCKQEYREK--DCGLGQIIANT 141 Query: 219 TIYVDGCLDK 228 I+ + C K Sbjct: 142 RIHTEPCASK 151 >SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) Length = 286 Score = 41.9 bits (94), Expect = 5e-04 Identities = 35/164 (21%), Positives = 57/164 (34%), Gaps = 5/164 (3%) Query: 40 DSCGRCMKFSLICINVITXXXXXXXXXXXXWVWTSRSFSSTLMS----NNMFIASXXXXX 95 D+ C+K++L+ +N I +++ F + L + + Sbjct: 18 DAPSTCIKYTLLFVNAIFCVLGILLMFDGIYIFLRLKFENELTDWFKLQSFMLYMPTLLF 77 Query: 96 XXXXXXXXLSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDRE 155 + GC GA KE L +Y F+ REK++ R Sbjct: 78 FTGFSLYLIVFFGCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAFLQREKLVDPKAR- 136 Query: 156 LYASVPYYGVKHEYTKSWDDTQTYLQCCGVKSPNDWHGNLPESC 199 L + Y + D QT +CCG++S DW N SC Sbjct: 137 LEDGLKSYQQDSSKQEFIDFIQTRFKCCGIESYKDWQANRYFSC 180 >SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) Length = 919 Score = 41.1 bits (92), Expect = 8e-04 Identities = 24/108 (22%), Positives = 45/108 (41%) Query: 70 WVWTSRSFSSTLMSNNMFIASXXXXXXXXXXXXXLSLLGCCGAAKEVKCMLLTYYXXXXX 129 WV TSRS ++L+SN+ ++ + ++GC KE + +L++Y Sbjct: 39 WVITSRSQYNSLLSNDNYVTVPGLMIAAGCLVIIVCVVGCVAVIKENRFILVSYLIMLVL 98 Query: 130 XXXXXXXXXXXQFVFREKVLTTLDRELYASVPYYGVKHEYTKSWDDTQ 177 ++R ++ L+ + + YG TK+ DD Q Sbjct: 99 IFILEIATGVVAVIYRSEISYELEVGIRGKMNRYGFTDAVTKAIDDLQ 146 >SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) Length = 280 Score = 39.5 bits (88), Expect = 0.003 Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 5/108 (4%) Query: 104 LSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDRELYASVPYY 163 + GC GA +E C L Y + ++KV +R L + Y Sbjct: 91 IGFFGCVGALRENTCFLTVYGTSVFLCLILLIACGAVAYTQKDKVQALKER-LKQDLKKY 149 Query: 164 GVKHEYTKSWDDTQTYLQCCGVKSPNDWHGNLPESCCREAYPGKRIDC 211 D QT L+CCGV+S DW N +C + PG R+ C Sbjct: 150 LDDPLNQDLIDFMQTLLKCCGVESYKDWQANPYFNC---SSPG-RMSC 193 >SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) Length = 211 Score = 39.5 bits (88), Expect = 0.003 Identities = 40/185 (21%), Positives = 68/185 (36%), Gaps = 22/185 (11%) Query: 37 GAMDS-CGRCMKFSLICINVITXXXXXXXXXXXXWVWTSRSFSSTLMSNNMFIASXXXXX 95 G++D+ GR +K ++ NV+ W +S+ + Sbjct: 2 GSLDAGAGRILKILVVFFNVLFFIFGIALIAVGAWAEVQYG-EFIEVSSVPYATGSRLVI 60 Query: 96 XXXXXXXXLSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFR---------E 146 +S GC GA KE +CML T++ + +R Sbjct: 61 AVGVIIAIVSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAYNYRGKNSLNSDSV 120 Query: 147 KVLTTLDRELYASVP-YYGVKHE--YTKSWDDTQTYLQCCGVKSPNDWHGN--------L 195 KV ++ +L ++ YG + TK++D Q +CCGV DW + + Sbjct: 121 KVKDEIESDLTKALKGDYGSSGQDGVTKAFDALQEKQKCCGVNGYLDWKASKKYNGTSTV 180 Query: 196 PESCC 200 P+SCC Sbjct: 181 PDSCC 185 >SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) Length = 669 Score = 37.5 bits (83), Expect = 0.010 Identities = 17/52 (32%), Positives = 24/52 (46%) Query: 70 WVWTSRSFSSTLMSNNMFIASXXXXXXXXXXXXXLSLLGCCGAAKEVKCMLL 121 W S + ++LM + F A+ + +GCCGA KE KC LL Sbjct: 178 WTRVSANEYASLMGQSGFTAAANIMIAAGALVMFIGFVGCCGAVKENKCFLL 229 Score = 37.1 bits (82), Expect = 0.014 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 14/75 (18%) Query: 146 EKVLTTLDRELYASVPY-YGV--KHEYTKSWDDTQTYLQCCG-VKSPNDW---------- 191 +KV++++++ L S+ YG K + TK+ D Q+ +CCG + P DW Sbjct: 507 DKVISSVEKALNQSISLDYGQSNKEKATKAVDRAQSIFKCCGATQGPKDWANTAWAKSNT 566 Query: 192 HGNLPESCCREAYPG 206 + +PESCC++ G Sbjct: 567 NQTVPESCCKKKAAG 581 >SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 426 Score = 33.9 bits (74), Expect = 0.13 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 13/72 (18%) Query: 180 LQCCGVKSPNDWHGN-----------LPESCCREAYPGKRIDCKSNQNPTTIYVDGCLDK 228 L+CCG + P DW G+ +P SCC E + C + +Y GC+++ Sbjct: 346 LKCCGGERPGDWLGSKWKRDLNKDKIVPLSCCTE--NANKTTCYKDDTYKEVYSSGCVNE 403 Query: 229 VIEFLREDAVYV 240 + F+ + + + Sbjct: 404 LKTFVDKHMILI 415 Score = 31.1 bits (67), Expect = 0.90 Identities = 11/19 (57%), Positives = 13/19 (68%) Query: 104 LSLLGCCGAAKEVKCMLLT 122 + GCCGA KE +CML T Sbjct: 327 VGFFGCCGAVKESRCMLAT 345 >SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 307 Score = 33.9 bits (74), Expect = 0.13 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 20/115 (17%) Query: 142 FVFREKVLTTLDRELYASVPYYGVKHEYTKSWDDTQTYLQCCGVKSPNDWHGN------- 194 F F E+ + + + V +Y + + D Q+ L+CCG S +DW+ N Sbjct: 39 FFFVEETRSKVSSAIKLFVVHYQDDLDLQNAIDGIQSNLKCCGGYSYHDWNHNKYFNCSA 98 Query: 195 -------LPESCCREAYP------GKRIDCKSNQNPTTIYVDGCLDKVIEFLRED 236 +P SCC E G R + + + IYV GC+D + +++ E+ Sbjct: 99 QAVEACGVPHSCCVEDQINTQCGFGVRREKSVLEASSVIYVRGCVDSLSDWMVEN 153 >SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10) Length = 691 Score = 32.7 bits (71), Expect = 0.29 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Query: 142 FVFREKVLTTLDRELYASVPYYGVKHEYTKSWDDTQTYLQCCGVKSPNDWHG----NLPE 197 + ++ K+ + L V +Y K EY K+ D Q +CCG + ND HG +P+ Sbjct: 425 YAYKGKLEGYVRTGLKNGVDHYD-KKEYKKAMDKVQGEFKCCGYEDSND-HGYKNSTVPK 482 Query: 198 SC 199 SC Sbjct: 483 SC 484 >SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08) Length = 357 Score = 32.3 bits (70), Expect = 0.39 Identities = 14/31 (45%), Positives = 15/31 (48%) Query: 174 DDTQTYLQCCGVKSPNDWHGNLPESCCREAY 204 D Q L+CCG K NDW N SC Y Sbjct: 182 DSIQKNLKCCGFKDYNDWELNPYYSCKSNGY 212 >SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) Length = 187 Score = 31.1 bits (67), Expect = 0.90 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Query: 71 VWTSRSFSSTL-MSNNMFIASXXXXXXXXXXXXXLSLLGCCGAAKEVKCMLLT 122 +W FS + +S++ + + + +GCCGA KE C+L T Sbjct: 54 IWARIQFSDYMKLSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT 106 >SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08) Length = 542 Score = 30.7 bits (66), Expect = 1.2 Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 11/74 (14%) Query: 163 YGVKHEYTKSWDDTQTYLQCCGVKSPNDW-----------HGNLPESCCREAYPGKRIDC 211 YG T+ D+TQ CCGV DW +P SCC+ P D Sbjct: 136 YGEHPGVTEMIDNTQMGSMCCGVTDYRDWFTSGWAARQGVSNRVPSSCCKVPVPTCGWDM 195 Query: 212 KSNQNPTTIYVDGC 225 I + GC Sbjct: 196 DVKNPVDVINIIGC 209 >SB_52414| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 446 Score = 29.9 bits (64), Expect = 2.1 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Query: 182 CCGVKSPNDWHGNLPESCC-REAYPGKRIDC--KSNQNPTTIYVDGCLDKVIEFLREDAV 238 CC N+ CC + AY + C K+ +N T ++ C DKVI+ R+ Sbjct: 118 CCKGSLQGISKSNVNPRCCGKVAYDANELICCRKTLRNMTHVHAKCCGDKVIDVTRQMCC 177 Query: 239 Y 239 Y Sbjct: 178 Y 178 >SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2) Length = 108 Score = 29.9 bits (64), Expect = 2.1 Identities = 15/58 (25%), Positives = 22/58 (37%) Query: 142 FVFREKVLTTLDRELYASVPYYGVKHEYTKSWDDTQTYLQCCGVKSPNDWHGNLPESC 199 F F V ++ ++ + Y + D Q +CCG S NDW N C Sbjct: 30 FAFWPNVRKSVQNQISKGIVNYRDNLDLQNIIDGIQENFKCCGSSSINDWDANRYFKC 87 >SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 140 Score = 29.9 bits (64), Expect = 2.1 Identities = 10/17 (58%), Positives = 13/17 (76%) Query: 104 LSLLGCCGAAKEVKCML 120 +S GCCGA KE +C+L Sbjct: 39 ISFFGCCGAIKESRCLL 55 >SB_5369| Best HMM Match : wnt (HMM E-Value=2.9e-18) Length = 354 Score = 29.1 bits (62), Expect = 3.6 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Query: 167 HEYTKSWDDTQTYLQCCGVKSPNDWHGNLPESCCREAYPGKRIDCKSNQNPTTIYVDGCL 226 HEYT+ W + CC V N H N + + GKR+ S++ P + + Sbjct: 259 HEYTRRWRCNCRFKWCCEVTCENIRHVNHART---NSQSGKRLCNNSHEVPQMSHKKSAI 315 Query: 227 D 227 D Sbjct: 316 D 316 >SB_38920| Best HMM Match : Tetraspannin (HMM E-Value=3.5e-07) Length = 219 Score = 28.7 bits (61), Expect = 4.8 Identities = 13/43 (30%), Positives = 21/43 (48%) Query: 142 FVFREKVLTTLDRELYASVPYYGVKHEYTKSWDDTQTYLQCCG 184 FV R ++ + + YGV+ + TK+ D Q +CCG Sbjct: 99 FVHRAELTHDMKYTTRRRMSDYGVRQDVTKAIDQMQINFKCCG 141 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.322 0.134 0.435 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,520,026 Number of Sequences: 59808 Number of extensions: 274557 Number of successful extensions: 473 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 430 Number of HSP's gapped (non-prelim): 32 length of query: 249 length of database: 16,821,457 effective HSP length: 80 effective length of query: 169 effective length of database: 12,036,817 effective search space: 2034222073 effective search space used: 2034222073 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 59 (27.9 bits)
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