Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001039-TA|BGIBMGA001039-PA|IPR000301|CD9/CD37/CD63
antigen, IPR008952|Tetraspanin
(249 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 8e-15
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 64 1e-10
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 58 9e-09
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 50 2e-06
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 44 2e-04
SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13) 42 4e-04
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 42 5e-04
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 41 8e-04
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 40 0.003
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 40 0.003
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 38 0.010
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10) 33 0.29
SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08) 32 0.39
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 31 0.90
SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08) 31 1.2
SB_52414| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2) 30 2.1
SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_5369| Best HMM Match : wnt (HMM E-Value=2.9e-18) 29 3.6
SB_38920| Best HMM Match : Tetraspannin (HMM E-Value=3.5e-07) 29 4.8
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 77.8 bits (183), Expect = 8e-15
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 15/148 (10%)
Query: 104 LSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDRELYASVPYY 163
+S GCCGA KE +C+L T++ +V+R KV L +++ ++ Y
Sbjct: 339 VSFFGCCGAIKEHRCLLATFFALLFIILAVEITGTALGYVYRNKVEEQLGKDMNDTIVSY 398
Query: 164 GVKHE--YTKSWDDTQTYLQCCGVKSPNDW---------HGNLPESCCREAYPGKRIDCK 212
G K + T ++D Q +CCG+ DW H +P+SCC+ G I+ K
Sbjct: 399 GEKGKEGITDAYDAIQKKEKCCGINGFKDWQRSYYTKGNHSIVPDSCCKTVSKGCGINFK 458
Query: 213 SNQNPTTIYVDGCLDKVIEFLREDAVYV 240
N IY GC D V L+++ + +
Sbjct: 459 END----IYTKGCFDTVKTLLKDNLIII 482
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 72.1 bits (169), Expect = 4e-13
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Query: 104 LSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDRELYASVPYY 163
++ LGCCGA KE KCML+ ++ + ++K+ LD+++ ++ Y
Sbjct: 67 VAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGGALAYNNKDKIENRLDKDILKAIENY 126
Query: 164 GVKHEYTKSWDDTQTYLQCCGVKSPNDWHGNL--------PESCCREAYPGKRIDCKSNQ 215
K+E KS +D QT +CCG + DW N+ P+SCC+ G + +
Sbjct: 127 PGKNE--KSINDMQTKFKCCGADNYTDWQSNIKMKNSSSVPDSCCKSEKAGCGVG--GVK 182
Query: 216 NPTTIYVDGC 225
+P IY GC
Sbjct: 183 DPKDIYTKGC 192
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 174 DDTQTYLQCCGVKSPNDWHG--------NLPESCCREAYPGKRIDCKSNQNPTTIYVDGC 225
DD Q ++CCG+ + DW N+P+SCC K + PT IY +GC
Sbjct: 243 DDMQKTVKCCGITTYEDWKSSDNLGLTDNVPDSCCTTV--EKDCGMGQRKTPTRIYKEGC 300
Query: 226 LDKVIEFLREDAVYV 240
K+ + + + V V
Sbjct: 301 YMKIKKDIDNNLVAV 315
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 63.7 bits (148), Expect = 1e-10
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 44 RCMKFSLICINVITXXXXXXXXXXXXWVWTSRSFS----STLMSNNMFIASXXXXXXXXX 99
+C+KF + N++ W+ +S+ S L + +
Sbjct: 8 KCIKFMVFFFNLLFLLAGCAIFAIGVWIISSKDEVAGDYSRLTGTINYKTAPILCIVIGI 67
Query: 100 XXXXLSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDRELYAS 159
++ L CCGA KE +CML TY+ +V+RE++ L ++ ++
Sbjct: 68 VTVIVAFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEKNLHGDIRST 127
Query: 160 VPYYGVK-HE-YTKSWDDTQTYLQCCGVKSPNDW--------HGNL-PESCCREAYPGKR 208
+ Y + H+ T++ D+ +CCG DW H ++ P SCC++ K
Sbjct: 128 MNEYHLSGHDAVTRAIDEIHRDFKCCGNAQYRDWFETKWAKTHPDMVPRSCCKDPSDSK- 186
Query: 209 IDCKSN--QNPTTIYVDGCLDKVIEFL 233
C N ++PT IY GC V ++L
Sbjct: 187 --CNENISKDPTKIYRRGCYMFVKKYL 211
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 58.0 bits (134), Expect = 7e-09
Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 3/165 (1%)
Query: 37 GAMDSCGRCMKFSLICINVITXXXXXXXXXXXXWVWTSRSFSSTLMSNNMFIASXXXXXX 96
G D C+K+SL INVI +++ T +++ F
Sbjct: 51 GQPDDPSLCVKYSLFTINVIFWLAGAVILAVGIFIFIEMKEEITKLADLNF-QPAVIFLA 109
Query: 97 XXXXXXXLSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDREL 156
+++ GC GA +E +C+L Y F +++ + T + +L
Sbjct: 110 LGGLLFVITIFGCIGALRENRCLLTAYIWMCGIILAGMIVCGGLGFYYKDVLETKVTAQL 169
Query: 157 YASVPYYG--VKHEYTKSWDDTQTYLQCCGVKSPNDWHGNLPESC 199
++ Y K + D QT LQCCGV+ NDW N+ +C
Sbjct: 170 KDAIVLYRDPTKGDLHLIIDTVQTELQCCGVQGLNDWDANIYFNC 214
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 57.6 bits (133), Expect = 9e-09
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 82 MSNNMFIASXXXXXXXXXXXXXLSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQ 141
+S+N F++ ++ GCCGA KE KCML+ ++
Sbjct: 398 ISSNDFMSGSRLLIAVGCIITIIAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLG 457
Query: 142 FVFREKVLTTLDRELYASVPYYGVKHEYTKSWDDTQTYLQCCGVKSPNDW--HGNL---- 195
++ ++K+ + L ++ ++ Y ++ + D Q +CCG K P+DW +G +
Sbjct: 458 YINKDKIQSDLTDDIIRNIKEYPKNNK--AAIDAMQMDFECCGAKGPSDWTFYGQMKYKA 515
Query: 196 -PESCC 200
P SCC
Sbjct: 516 GPGSCC 521
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/96 (28%), Positives = 39/96 (40%)
Query: 104 LSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDRELYASVPYY 163
L GC GA +E C+L + FVF++KV + +L +V Y
Sbjct: 60 LGFSGCIGALRENICLLKFFSVVLAIIFFLQLALGVFVFVFQDKVEAVIVEKLQTAVTKY 119
Query: 164 GVKHEYTKSWDDTQTYLQCCGVKSPNDWHGNLPESC 199
+ D Q +CCG K NDW N+ +C
Sbjct: 120 RDNADLQNLIDGVQQEFKCCGAKGINDWDKNIYFNC 155
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 49.6 bits (113), Expect = 2e-06
Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 29/226 (12%)
Query: 40 DSCGRCMKFSLICINVITXXXXXXXXXXXXWVWTSRSFSSTLMSNNMFIASXXXXXXXXX 99
D+ C+K+ L +NV+ ++ T F + +++
Sbjct: 33 DAPSTCIKYILFFVNVVFWVFGVLILVIGSYLMTE--FKNAWNLDSILYEPSVVILIVGI 90
Query: 100 XXXXLSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDREL-YA 158
++ +GC GA +E +L Y ++ R+KV+ L +L +
Sbjct: 91 LLFLIATVGCIGALRENTILLAIYGGAVTLCLILLVSAGTAVYIHRDKVVAKLKDDLQHY 150
Query: 159 SVPYYGVKHEYTKSWDDTQTYLQCCGVKSPNDWHGN--------------LPESCCREA- 203
P K + D QT L+CCG+ S NDW N +P SCC+E+
Sbjct: 151 RDPD---KENFQFLIDRLQTNLKCCGINSYNDWQTNVYFNCSSPGSESCGVPFSCCKESI 207
Query: 204 -------YPGKRIDCKSNQNPTTIYVDGCLDKVIEFLREDAVYVVL 242
Y R+ + + +Y GC I F+ D +Y+V+
Sbjct: 208 QLNRQCGYDAGRMKTDAERLEKGVYSKGCWKTAISFIM-DNLYLVI 252
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 44.0 bits (99), Expect = 1e-04
Identities = 47/225 (20%), Positives = 82/225 (36%), Gaps = 28/225 (12%)
Query: 40 DSCGRCMKFSLICINVITXXXXXXXXXXXXWVWTSRSFSSTLMSNNMFIASXXXXXXXXX 99
D+ C+K+ L +NV+ ++ T F + +++
Sbjct: 33 DAPSTCIKYILFFVNVVFWVFGVLILVIGSYLMTE--FKNAWNLDSILYEPSVVILIVGI 90
Query: 100 XXXXLSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDREL-YA 158
++ +GC GA +E +L Y ++ ++KV+ L +L +
Sbjct: 91 LLFLIATVGCIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYMHQDKVVEKLKDDLKHY 150
Query: 159 SVPYYGVKHEYTKSWDDTQTYLQCCGVKSPNDWHGNL--------------PESCCREA- 203
P K + D QT L+CCGV S DW N+ P SCC+E+
Sbjct: 151 RDPD---KENFQFLIDRLQTNLKCCGVNSYTDWQTNIYFNCSSPGSESCGVPFSCCKESI 207
Query: 204 -------YPGKRIDCKSNQNPTTIYVDGCLDKVIEFLREDAVYVV 241
Y R+ + + +Y GC I F+ ++ VV
Sbjct: 208 QLNRQCGYDAGRMKTDAERLEKGVYSKGCWTIAISFIMDNLYLVV 252
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 43.6 bits (98), Expect = 2e-04
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 40/183 (21%)
Query: 71 VWTSRSFSSTL-MSNNMFIASXXXXXXXXXXXXXLSLLGCCGAAKEVKCMLLTYYXXXXX 129
+W FS + +S++ + + + +GCCGA KE C+L T
Sbjct: 196 IWARIQFSDYMKLSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT------- 248
Query: 130 XXXXXXXXXXXQFVFREKVLTTLDRELYASVPYYGVKHEYTKSWDDTQTYLQCCGVKSPN 189
+ + LD L P G K +W+D Q L+CCG ++
Sbjct: 249 --------------IKTGLSDGLDTAL-KDYPEQGFKD----AWNDMQKNLKCCGSRNYT 289
Query: 190 DW-----------HGNLPESCCREAYPGKRIDCKSNQNPTTIYVD-GCLDKVIEFLREDA 237
DW +G++PESCC++ K + + +P TI + GC +++ +
Sbjct: 290 DWFMVAWAGPNTKNGSVPESCCKDT-KVKSCNLEVLSHPETINSEQGCYGAAVKYFEDKL 348
Query: 238 VYV 240
V +
Sbjct: 349 VII 351
>SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13)
Length = 174
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 170 TKSWDDTQTYLQCCGVKS-PNDWHGN--------LPESCCREAYPGKRIDCKSNQ--NPT 218
T+ D Q LQCCG S PNDW N +P+SCC++ Y K DC Q T
Sbjct: 84 TRVVDSIQERLQCCGADSGPNDWMNNKHFLQSASVPDSCCKQEYREK--DCGLGQIIANT 141
Query: 219 TIYVDGCLDK 228
I+ + C K
Sbjct: 142 RIHTEPCASK 151
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 41.9 bits (94), Expect = 5e-04
Identities = 35/164 (21%), Positives = 57/164 (34%), Gaps = 5/164 (3%)
Query: 40 DSCGRCMKFSLICINVITXXXXXXXXXXXXWVWTSRSFSSTLMS----NNMFIASXXXXX 95
D+ C+K++L+ +N I +++ F + L + +
Sbjct: 18 DAPSTCIKYTLLFVNAIFCVLGILLMFDGIYIFLRLKFENELTDWFKLQSFMLYMPTLLF 77
Query: 96 XXXXXXXXLSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDRE 155
+ GC GA KE L +Y F+ REK++ R
Sbjct: 78 FTGFSLYLIVFFGCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAFLQREKLVDPKAR- 136
Query: 156 LYASVPYYGVKHEYTKSWDDTQTYLQCCGVKSPNDWHGNLPESC 199
L + Y + D QT +CCG++S DW N SC
Sbjct: 137 LEDGLKSYQQDSSKQEFIDFIQTRFKCCGIESYKDWQANRYFSC 180
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/108 (22%), Positives = 45/108 (41%)
Query: 70 WVWTSRSFSSTLMSNNMFIASXXXXXXXXXXXXXLSLLGCCGAAKEVKCMLLTYYXXXXX 129
WV TSRS ++L+SN+ ++ + ++GC KE + +L++Y
Sbjct: 39 WVITSRSQYNSLLSNDNYVTVPGLMIAAGCLVIIVCVVGCVAVIKENRFILVSYLIMLVL 98
Query: 130 XXXXXXXXXXXQFVFREKVLTTLDRELYASVPYYGVKHEYTKSWDDTQ 177
++R ++ L+ + + YG TK+ DD Q
Sbjct: 99 IFILEIATGVVAVIYRSEISYELEVGIRGKMNRYGFTDAVTKAIDDLQ 146
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 104 LSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFREKVLTTLDRELYASVPYY 163
+ GC GA +E C L Y + ++KV +R L + Y
Sbjct: 91 IGFFGCVGALRENTCFLTVYGTSVFLCLILLIACGAVAYTQKDKVQALKER-LKQDLKKY 149
Query: 164 GVKHEYTKSWDDTQTYLQCCGVKSPNDWHGNLPESCCREAYPGKRIDC 211
D QT L+CCGV+S DW N +C + PG R+ C
Sbjct: 150 LDDPLNQDLIDFMQTLLKCCGVESYKDWQANPYFNC---SSPG-RMSC 193
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 39.5 bits (88), Expect = 0.003
Identities = 40/185 (21%), Positives = 68/185 (36%), Gaps = 22/185 (11%)
Query: 37 GAMDS-CGRCMKFSLICINVITXXXXXXXXXXXXWVWTSRSFSSTLMSNNMFIASXXXXX 95
G++D+ GR +K ++ NV+ W +S+ +
Sbjct: 2 GSLDAGAGRILKILVVFFNVLFFIFGIALIAVGAWAEVQYG-EFIEVSSVPYATGSRLVI 60
Query: 96 XXXXXXXXLSLLGCCGAAKEVKCMLLTYYXXXXXXXXXXXXXXXXQFVFR---------E 146
+S GC GA KE +CML T++ + +R
Sbjct: 61 AVGVIIAIVSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAYNYRGKNSLNSDSV 120
Query: 147 KVLTTLDRELYASVP-YYGVKHE--YTKSWDDTQTYLQCCGVKSPNDWHGN--------L 195
KV ++ +L ++ YG + TK++D Q +CCGV DW + +
Sbjct: 121 KVKDEIESDLTKALKGDYGSSGQDGVTKAFDALQEKQKCCGVNGYLDWKASKKYNGTSTV 180
Query: 196 PESCC 200
P+SCC
Sbjct: 181 PDSCC 185
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 70 WVWTSRSFSSTLMSNNMFIASXXXXXXXXXXXXXLSLLGCCGAAKEVKCMLL 121
W S + ++LM + F A+ + +GCCGA KE KC LL
Sbjct: 178 WTRVSANEYASLMGQSGFTAAANIMIAAGALVMFIGFVGCCGAVKENKCFLL 229
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 14/75 (18%)
Query: 146 EKVLTTLDRELYASVPY-YGV--KHEYTKSWDDTQTYLQCCG-VKSPNDW---------- 191
+KV++++++ L S+ YG K + TK+ D Q+ +CCG + P DW
Sbjct: 507 DKVISSVEKALNQSISLDYGQSNKEKATKAVDRAQSIFKCCGATQGPKDWANTAWAKSNT 566
Query: 192 HGNLPESCCREAYPG 206
+ +PESCC++ G
Sbjct: 567 NQTVPESCCKKKAAG 581
>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 13/72 (18%)
Query: 180 LQCCGVKSPNDWHGN-----------LPESCCREAYPGKRIDCKSNQNPTTIYVDGCLDK 228
L+CCG + P DW G+ +P SCC E + C + +Y GC+++
Sbjct: 346 LKCCGGERPGDWLGSKWKRDLNKDKIVPLSCCTE--NANKTTCYKDDTYKEVYSSGCVNE 403
Query: 229 VIEFLREDAVYV 240
+ F+ + + +
Sbjct: 404 LKTFVDKHMILI 415
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 104 LSLLGCCGAAKEVKCMLLT 122
+ GCCGA KE +CML T
Sbjct: 327 VGFFGCCGAVKESRCMLAT 345
>SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 33.9 bits (74), Expect = 0.13
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 20/115 (17%)
Query: 142 FVFREKVLTTLDRELYASVPYYGVKHEYTKSWDDTQTYLQCCGVKSPNDWHGN------- 194
F F E+ + + + V +Y + + D Q+ L+CCG S +DW+ N
Sbjct: 39 FFFVEETRSKVSSAIKLFVVHYQDDLDLQNAIDGIQSNLKCCGGYSYHDWNHNKYFNCSA 98
Query: 195 -------LPESCCREAYP------GKRIDCKSNQNPTTIYVDGCLDKVIEFLRED 236
+P SCC E G R + + + IYV GC+D + +++ E+
Sbjct: 99 QAVEACGVPHSCCVEDQINTQCGFGVRREKSVLEASSVIYVRGCVDSLSDWMVEN 153
>SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10)
Length = 691
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 142 FVFREKVLTTLDRELYASVPYYGVKHEYTKSWDDTQTYLQCCGVKSPNDWHG----NLPE 197
+ ++ K+ + L V +Y K EY K+ D Q +CCG + ND HG +P+
Sbjct: 425 YAYKGKLEGYVRTGLKNGVDHYD-KKEYKKAMDKVQGEFKCCGYEDSND-HGYKNSTVPK 482
Query: 198 SC 199
SC
Sbjct: 483 SC 484
>SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08)
Length = 357
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 174 DDTQTYLQCCGVKSPNDWHGNLPESCCREAY 204
D Q L+CCG K NDW N SC Y
Sbjct: 182 DSIQKNLKCCGFKDYNDWELNPYYSCKSNGY 212
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 71 VWTSRSFSSTL-MSNNMFIASXXXXXXXXXXXXXLSLLGCCGAAKEVKCMLLT 122
+W FS + +S++ + + + +GCCGA KE C+L T
Sbjct: 54 IWARIQFSDYMKLSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT 106
>SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08)
Length = 542
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 11/74 (14%)
Query: 163 YGVKHEYTKSWDDTQTYLQCCGVKSPNDW-----------HGNLPESCCREAYPGKRIDC 211
YG T+ D+TQ CCGV DW +P SCC+ P D
Sbjct: 136 YGEHPGVTEMIDNTQMGSMCCGVTDYRDWFTSGWAARQGVSNRVPSSCCKVPVPTCGWDM 195
Query: 212 KSNQNPTTIYVDGC 225
I + GC
Sbjct: 196 DVKNPVDVINIIGC 209
>SB_52414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 182 CCGVKSPNDWHGNLPESCC-REAYPGKRIDC--KSNQNPTTIYVDGCLDKVIEFLREDAV 238
CC N+ CC + AY + C K+ +N T ++ C DKVI+ R+
Sbjct: 118 CCKGSLQGISKSNVNPRCCGKVAYDANELICCRKTLRNMTHVHAKCCGDKVIDVTRQMCC 177
Query: 239 Y 239
Y
Sbjct: 178 Y 178
>SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2)
Length = 108
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/58 (25%), Positives = 22/58 (37%)
Query: 142 FVFREKVLTTLDRELYASVPYYGVKHEYTKSWDDTQTYLQCCGVKSPNDWHGNLPESC 199
F F V ++ ++ + Y + D Q +CCG S NDW N C
Sbjct: 30 FAFWPNVRKSVQNQISKGIVNYRDNLDLQNIIDGIQENFKCCGSSSINDWDANRYFKC 87
>SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 104 LSLLGCCGAAKEVKCML 120
+S GCCGA KE +C+L
Sbjct: 39 ISFFGCCGAIKESRCLL 55
>SB_5369| Best HMM Match : wnt (HMM E-Value=2.9e-18)
Length = 354
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 167 HEYTKSWDDTQTYLQCCGVKSPNDWHGNLPESCCREAYPGKRIDCKSNQNPTTIYVDGCL 226
HEYT+ W + CC V N H N + + GKR+ S++ P + +
Sbjct: 259 HEYTRRWRCNCRFKWCCEVTCENIRHVNHART---NSQSGKRLCNNSHEVPQMSHKKSAI 315
Query: 227 D 227
D
Sbjct: 316 D 316
>SB_38920| Best HMM Match : Tetraspannin (HMM E-Value=3.5e-07)
Length = 219
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 142 FVFREKVLTTLDRELYASVPYYGVKHEYTKSWDDTQTYLQCCG 184
FV R ++ + + YGV+ + TK+ D Q +CCG
Sbjct: 99 FVHRAELTHDMKYTTRRRMSDYGVRQDVTKAIDQMQINFKCCG 141
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.134 0.435
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,520,026
Number of Sequences: 59808
Number of extensions: 274557
Number of successful extensions: 473
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 430
Number of HSP's gapped (non-prelim): 32
length of query: 249
length of database: 16,821,457
effective HSP length: 80
effective length of query: 169
effective length of database: 12,036,817
effective search space: 2034222073
effective search space used: 2034222073
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)
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