Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001038-TA|BGIBMGA001038-PA|IPR001680|WD-40 repeat,
IPR013894|Domain of unknown function DUF1767,
IPR000449|Ubiquitin-associated, IPR010304|Survival motor neuron,
IPR011046|WD40-like, IPR009060|UBA-like, IPR002999|Tudor
(961 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 29 0.20
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 29 0.20
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 29 0.20
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 26 1.1
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 26 1.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 26 1.4
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 25 1.9
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 25 1.9
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 25 1.9
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 23 10.0
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 23 10.0
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 28.7 bits (61), Expect = 0.20
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 777 ATSKLNLLSNQSRIDEQQVHNYQQHTDQSYQSKQTYPSNHSQDIPPFRRSND 828
A ++N + + R +EQ+ H QQ Q +QT+ S H P + S D
Sbjct: 67 AVKEINEQARRER-EEQERHKQQQQEKQQKIEQQTHSSIHQHHHDPMKMSLD 117
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 28.7 bits (61), Expect = 0.20
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 777 ATSKLNLLSNQSRIDEQQVHNYQQHTDQSYQSKQTYPSNHSQDIPPFRRSND 828
A ++N + + R +EQ+ H QQ Q +QT+ S H P + S D
Sbjct: 218 AVKEINEQARRER-EEQERHKQQQQEKQQKIEQQTHSSIHQHHHDPMKMSLD 268
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 28.7 bits (61), Expect = 0.20
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 777 ATSKLNLLSNQSRIDEQQVHNYQQHTDQSYQSKQTYPSNHSQDIPPFRRSND 828
A ++N + + R +EQ+ H QQ Q +QT+ S H P + S D
Sbjct: 277 AVKEINEQARRER-EEQERHKQQQQEKQQKIEQQTHSSIHQHHHDPMKMSLD 327
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 26.2 bits (55), Expect = 1.1
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 744 YKDRHMRNDRNPNDRGPQQNYNHNSST 770
+++R M+N +N + QQ N+N++T
Sbjct: 291 FQNRRMKNKKNSQRQAAQQQNNNNAAT 317
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 25.8 bits (54), Expect = 1.4
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 561 GFTEEQAEATLKYTKNNVDRALKILQKRDNSENRNKEKPQKEQDPVKRK 609
G + E L+++ N + + + K DN EN K Q+ + RK
Sbjct: 1067 GANAQDDEGGLEFSVNKLFKCMICTYKADNKENEQLRKIQESLRDLNRK 1115
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 25.8 bits (54), Expect = 1.4
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 561 GFTEEQAEATLKYTKNNVDRALKILQKRDNSENRNKEKPQKEQDPVKRK 609
G + E L+++ N + + + K DN EN K Q+ + RK
Sbjct: 1067 GANAQDDEGGLEFSVNKLFKCMICTYKADNKENEQLRKIQESLRDLNRK 1115
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 25.4 bits (53), Expect = 1.9
Identities = 19/108 (17%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Query: 739 YQQNQYKDRHMRNDRNPNDRGPQQ-NYNHNSSTMDG-LVDATSKLNLLSNQSRIDEQQVH 796
Y Y+D + PQ+ Y+H + D +++ + L+ +
Sbjct: 39 YSNYHYEDPYGYTGSEETPPSPQEVYYHHQTIPQDNPIINTETGLSYTNLDYGNSNFPPI 98
Query: 797 NYQQHTDQSYQSKQTYPSNHSQDIPPFRRSNDLHQDGYQRRQQVPNGY 844
N+Q + + ++ + H +++ + + LH++ YQ +V +GY
Sbjct: 99 NHQNYNEPYQRTHENMLLRHHEEVADGHQHHFLHENKYQ--LEVDSGY 144
Score = 24.2 bits (50), Expect = 4.3
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 727 HHQNMNMPYNNTYQQNQYKDRHMRNDRNPNDRGPQQNYNH-NSSTMDGLVDATSKLNLLS 785
+HQN N PY T++ + +R+ D G Q ++ H N ++ VD+ L S
Sbjct: 99 NHQNYNEPYQRTHE-----NMLLRHHEEVAD-GHQHHFLHENKYQLE--VDSGYHLGASS 150
Query: 786 --NQSRIDEQQVHNYQQHTDQSYQSKQTYPSNHSQDIP 821
S ++ Q +H Y++ Q + + ++ +P
Sbjct: 151 TPTNSCMEYQHLHRYKEEALQGDGRMRQHVMHNLSSVP 188
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 25.4 bits (53), Expect = 1.9
Identities = 19/108 (17%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Query: 739 YQQNQYKDRHMRNDRNPNDRGPQQ-NYNHNSSTMDG-LVDATSKLNLLSNQSRIDEQQVH 796
Y Y+D + PQ+ Y+H + D +++ + L+ +
Sbjct: 39 YSNYHYEDPYGYTGSEETPPSPQEVYYHHQTIPQDNPIINTETGLSYTNLDYGNSNFPPI 98
Query: 797 NYQQHTDQSYQSKQTYPSNHSQDIPPFRRSNDLHQDGYQRRQQVPNGY 844
N+Q + + ++ + H +++ + + LH++ YQ +V +GY
Sbjct: 99 NHQNYNEPYQRTHENMLLRHHEEVADGHQHHFLHENKYQ--LEVDSGY 144
Score = 24.2 bits (50), Expect = 4.3
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 727 HHQNMNMPYNNTYQQNQYKDRHMRNDRNPNDRGPQQNYNH-NSSTMDGLVDATSKLNLLS 785
+HQN N PY T++ + +R+ D G Q ++ H N ++ VD+ L S
Sbjct: 99 NHQNYNEPYQRTHE-----NMLLRHHEEVAD-GHQHHFLHENKYQLE--VDSGYHLGASS 150
Query: 786 --NQSRIDEQQVHNYQQHTDQSYQSKQTYPSNHSQDIP 821
S ++ Q +H Y++ Q + + ++ +P
Sbjct: 151 TPTNSCMEYQHLHRYKEEALQGDGRMRQHVMHNLSSVP 188
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 25.4 bits (53), Expect = 1.9
Identities = 19/108 (17%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Query: 739 YQQNQYKDRHMRNDRNPNDRGPQQ-NYNHNSSTMDG-LVDATSKLNLLSNQSRIDEQQVH 796
Y Y+D + PQ+ Y+H + D +++ + L+ +
Sbjct: 39 YSNYHYEDPYGYTGSEETPPSPQEVYYHHQTIPQDNPIINTETGLSYTNLDYGNSNFPPI 98
Query: 797 NYQQHTDQSYQSKQTYPSNHSQDIPPFRRSNDLHQDGYQRRQQVPNGY 844
N+Q + + ++ + H +++ + + LH++ YQ +V +GY
Sbjct: 99 NHQNYNEPYQRTHENMLLRHHEEVADGHQHHFLHENKYQ--LEVDSGY 144
Score = 24.2 bits (50), Expect = 4.3
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 727 HHQNMNMPYNNTYQQNQYKDRHMRNDRNPNDRGPQQNYNH-NSSTMDGLVDATSKLNLLS 785
+HQN N PY T++ + +R+ D G Q ++ H N ++ VD+ L S
Sbjct: 99 NHQNYNEPYQRTHE-----NMLLRHHEEVAD-GHQHHFLHENKYQLE--VDSGYHLGASS 150
Query: 786 --NQSRIDEQQVHNYQQHTDQSYQSKQTYPSNHSQDIP 821
S ++ Q +H Y++ Q + + ++ +P
Sbjct: 151 TPTNSCMEYQHLHRYKEEALQGDGRMRQHVMHNLSSVP 188
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 23.0 bits (47), Expect = 10.0
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 792 EQQVHNYQQHTDQSYQSKQTYPSNHSQDIPPFRRSNDLHQDGYQ 835
EQQ+ Q S+ + + ++ + P F S +H DG Q
Sbjct: 41 EQQMWEPQMWHHHSHMPPHSVFAANNAEFPEFVHSGMVHNDGTQ 84
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 23.0 bits (47), Expect = 10.0
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 792 EQQVHNYQQHTDQSYQSKQTYPSNHSQDIPPFRRSNDLHQDGYQ 835
EQQ+ Q S+ + + ++ + P F S +H DG Q
Sbjct: 41 EQQMWEPQMWHHHSHMPPHSVFAANNAEFPEFVHSGMVHNDGTQ 84
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.313 0.130 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,868
Number of Sequences: 317
Number of extensions: 10647
Number of successful extensions: 26
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 14
length of query: 961
length of database: 114,650
effective HSP length: 63
effective length of query: 898
effective length of database: 94,679
effective search space: 85021742
effective search space used: 85021742
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 47 (23.0 bits)
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