Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001038-TA|BGIBMGA001038-PA|IPR001680|WD-40 repeat,
IPR013894|Domain of unknown function DUF1767,
IPR000449|Ubiquitin-associated, IPR010304|Survival motor neuron,
IPR011046|WD40-like, IPR009060|UBA-like, IPR002999|Tudor
(961 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 151 3e-36
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 126 5e-29
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 126 5e-29
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 124 4e-28
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 122 2e-27
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 120 5e-27
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 119 1e-26
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 116 6e-26
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 114 3e-25
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 113 7e-25
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 110 4e-24
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 110 4e-24
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 110 5e-24
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 105 1e-22
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 103 4e-22
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 102 1e-21
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 102 1e-21
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 100 5e-21
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 98 2e-20
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 98 2e-20
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 98 3e-20
At5g19950.3 68418.m02375 expressed protein 97 7e-20
At5g19950.2 68418.m02374 expressed protein 97 7e-20
At5g19950.1 68418.m02373 expressed protein 97 7e-20
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 96 9e-20
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 96 1e-19
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 94 3e-19
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 94 3e-19
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 94 3e-19
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 94 3e-19
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 94 3e-19
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 93 1e-18
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 93 1e-18
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 92 1e-18
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 92 2e-18
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 91 3e-18
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 91 4e-18
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 91 4e-18
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 91 4e-18
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 89 1e-17
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 89 2e-17
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 88 2e-17
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 87 7e-17
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 87 7e-17
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 87 7e-17
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 87 7e-17
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 85 2e-16
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 81 3e-15
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 80 6e-15
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 79 1e-14
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 79 2e-14
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 79 2e-14
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 79 2e-14
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 79 2e-14
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 77 4e-14
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 77 7e-14
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 76 1e-13
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 75 3e-13
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 74 4e-13
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 74 4e-13
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 74 5e-13
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 73 7e-13
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 73 1e-12
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 73 1e-12
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 72 2e-12
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 71 3e-12
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 71 4e-12
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 69 1e-11
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 69 2e-11
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 69 2e-11
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 68 3e-11
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 68 3e-11
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 68 3e-11
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 67 6e-11
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 67 6e-11
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 66 1e-10
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 65 2e-10
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 65 2e-10
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 65 2e-10
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 64 3e-10
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 64 4e-10
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 64 4e-10
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 64 6e-10
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 64 6e-10
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 64 6e-10
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 63 1e-09
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 63 1e-09
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 62 1e-09
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 62 1e-09
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 60 5e-09
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 60 7e-09
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 60 7e-09
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 60 7e-09
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 60 9e-09
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 59 1e-08
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 59 2e-08
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 59 2e-08
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 59 2e-08
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 59 2e-08
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 57 5e-08
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 57 5e-08
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 57 5e-08
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 57 6e-08
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 57 6e-08
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 57 6e-08
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 56 9e-08
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 56 9e-08
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 56 1e-07
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 56 1e-07
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 56 1e-07
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 56 1e-07
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 56 1e-07
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 56 1e-07
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 56 1e-07
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 55 3e-07
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 55 3e-07
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 55 3e-07
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 55 3e-07
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 54 3e-07
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 54 3e-07
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 54 3e-07
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 54 5e-07
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 54 5e-07
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 54 5e-07
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 54 5e-07
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 54 5e-07
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 54 6e-07
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 53 8e-07
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 53 8e-07
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 53 8e-07
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 53 8e-07
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 53 8e-07
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 53 8e-07
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 53 1e-06
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 53 1e-06
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 53 1e-06
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 52 2e-06
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 52 2e-06
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 52 2e-06
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 52 2e-06
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 52 2e-06
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 52 2e-06
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 52 2e-06
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 52 2e-06
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 51 4e-06
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 51 4e-06
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 51 4e-06
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 51 4e-06
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 51 4e-06
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 51 4e-06
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 50 7e-06
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 50 7e-06
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 50 1e-05
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 50 1e-05
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 49 1e-05
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 49 1e-05
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 49 1e-05
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 49 2e-05
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 49 2e-05
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 49 2e-05
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 49 2e-05
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 49 2e-05
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 49 2e-05
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 49 2e-05
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 48 2e-05
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 48 2e-05
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 48 2e-05
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 48 3e-05
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 48 3e-05
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 48 4e-05
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 47 5e-05
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 47 7e-05
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 47 7e-05
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 46 9e-05
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 46 1e-04
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 46 1e-04
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 46 2e-04
At1g08190.1 68414.m00905 vacuolar assembly protein, putative (VP... 46 2e-04
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 45 2e-04
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 45 2e-04
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 45 2e-04
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 45 2e-04
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 45 2e-04
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 45 3e-04
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 44 4e-04
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 44 4e-04
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 44 4e-04
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 44 4e-04
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 44 4e-04
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 44 5e-04
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 44 5e-04
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 44 5e-04
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 44 6e-04
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 44 6e-04
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 44 6e-04
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 43 9e-04
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 43 0.001
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 43 0.001
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 42 0.002
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 42 0.002
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 42 0.002
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 42 0.002
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 42 0.002
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 42 0.002
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 41 0.003
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 41 0.003
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 41 0.003
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 41 0.005
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 41 0.005
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 40 0.006
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 40 0.008
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 40 0.008
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 40 0.008
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 39 0.014
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 39 0.018
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 39 0.018
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 39 0.018
At2g13370.1 68415.m01476 chromodomain-helicase-DNA-binding famil... 39 0.018
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 38 0.024
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 38 0.032
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 38 0.042
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 37 0.074
At3g50590.1 68416.m05533 transducin family protein / WD-40 repea... 37 0.074
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 37 0.074
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 36 0.098
At4g30510.2 68417.m04332 transport protein-related weak similari... 36 0.098
At4g30510.1 68417.m04331 transport protein-related weak similari... 36 0.098
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 36 0.098
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 36 0.098
At1g25540.1 68414.m03171 phytochrome and flowering time regulato... 36 0.098
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 36 0.13
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 36 0.13
At1g73180.1 68414.m08469 eukaryotic translation initiation facto... 36 0.13
At2g44200.1 68415.m05500 expressed protein 36 0.17
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 35 0.23
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 35 0.23
At5g07940.1 68418.m00920 expressed protein 35 0.23
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 35 0.23
At3g58120.1 68416.m06481 bZIP transcription factor family protei... 35 0.23
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 35 0.23
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 35 0.23
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 35 0.30
At3g28770.1 68416.m03591 expressed protein 35 0.30
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 35 0.30
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 35 0.30
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 34 0.39
At2g17510.1 68415.m02025 ribonuclease II family protein similar ... 34 0.39
At2g02570.2 68415.m00197 expressed protein 34 0.39
At2g02570.1 68415.m00196 expressed protein 34 0.39
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 34 0.52
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 34 0.52
At4g35940.1 68417.m05113 expressed protein 34 0.52
At2g40810.2 68415.m05035 WD-40 repeat protein family similar to ... 33 0.69
At2g40810.1 68415.m05034 WD-40 repeat protein family similar to ... 33 0.69
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea... 33 0.91
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 33 0.91
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 33 0.91
At1g56660.1 68414.m06516 expressed protein 33 0.91
At1g15030.1 68414.m01796 expressed protein 33 1.2
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 32 1.6
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 32 1.6
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 32 2.1
At5g11050.1 68418.m01291 myb family transcription factor contain... 32 2.1
At3g47750.1 68416.m05202 ABC transporter family protein probable... 32 2.1
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 32 2.1
At1g03380.1 68414.m00317 expressed protein 32 2.1
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 31 2.8
At5g46280.1 68418.m05697 DNA replication licensing factor, putat... 31 2.8
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 31 2.8
At4g26630.1 68417.m03837 expressed protein 31 2.8
At3g60110.1 68416.m06712 DNA-binding bromodomain-containing prot... 31 2.8
At3g29075.1 68416.m03637 glycine-rich protein 31 2.8
At2g28800.1 68415.m03501 chloroplast membrane protein (ALBINO3) ... 31 2.8
At2g22795.1 68415.m02704 expressed protein 31 2.8
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 31 2.8
At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100... 31 2.8
At1g14380.1 68414.m01704 calmodulin-binding family protein conta... 31 2.8
At1g08800.1 68414.m00979 expressed protein weak similarity to SP... 31 2.8
At5g27640.1 68418.m03311 eukaryotic translation initiation facto... 31 3.7
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 31 3.7
At4g23260.1 68417.m03353 protein kinase family protein contains ... 31 3.7
At2g38830.1 68415.m04771 tumor susceptibility protein-related co... 31 3.7
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 31 3.7
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 31 3.7
At5g46400.1 68418.m05711 expressed protein 31 4.9
At5g41410.1 68418.m05031 homeodomain protein (BEL1) identical to... 31 4.9
At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family p... 31 4.9
At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family p... 31 4.9
At1g29370.1 68414.m03591 kinase-related similar to putative prot... 31 4.9
At1g29350.1 68414.m03588 expressed protein 31 4.9
At1g15780.1 68414.m01893 expressed protein 31 4.9
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 30 6.4
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 30 6.4
At2g12875.1 68415.m01402 hypothetical protein 30 6.4
At1g17870.1 68414.m02211 expressed protein contains 6 transmembr... 30 6.4
At1g17690.1 68414.m02190 expressed protein 30 6.4
At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related simil... 30 6.4
At1g02750.1 68414.m00229 drought-responsive family protein conta... 30 6.4
At5g64030.1 68418.m08039 dehydration-responsive protein-related ... 30 8.5
At5g55220.1 68418.m06883 trigger factor type chaperone family pr... 30 8.5
At5g16500.1 68418.m01928 protein kinase family protein contains ... 30 8.5
At2g46180.1 68415.m05742 intracellular protein transport protein... 30 8.5
At1g73050.1 68414.m08447 (R)-mandelonitrile lyase, putative / (R... 30 8.5
At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit... 30 8.5
At1g15940.1 68414.m01913 expressed protein similar To androgen-i... 30 8.5
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 151 bits (365), Expect = 3e-36
Identities = 84/294 (28%), Positives = 149/294 (50%), Gaps = 7/294 (2%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
K L+GH AI+ + ++ + +A++S+D +++LW +R++GH + D+ +SS
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 75 GKYMASASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
Y SAS D T+RIW + + + H+ V V F+ + I++ S D+ +++W
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWE 156
Query: 134 THKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGL 193
K + H+ + + DGS+I S S D S K+W+ G C+ T D K +
Sbjct: 157 VKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAV 216
Query: 194 HLA-WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNE---AVTQVAIHPSGSYILTA 249
A + P+G ++ VAT +KL + T ++ Y+ H +T +G YI++
Sbjct: 217 SFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSG 276
Query: 250 SKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGD--DKLVFIWK 301
S+D + + DL + + L GH V +V+ P + SS+G+ DK + IWK
Sbjct: 277 SEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIWK 330
Score = 84.2 bits (199), Expect = 4e-16
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
Query: 129 VKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDL 188
V ++ ++H + + GHT + C + SNDG+++AS S DK+ LW+ + IH Y+
Sbjct: 27 VPIYKPYRH--LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGH 84
Query: 189 KGHGLHLAWHPSGCYVAVATSHGNVKLYDIRT-HNLVQYYSIHNEAVTQVAIHPSGSYIL 247
LAW Y A+ ++++D R+ + ++ H V V +P + I+
Sbjct: 85 SSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIV 144
Query: 248 TASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ S D ++I ++ G + + H+ P+++V+F+ G SA D IW
Sbjct: 145 SGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Score = 47.2 bits (107), Expect = 5e-05
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 12 CLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT- 70
CLK + A++ ++PN + I ++LD+++ L + + GH V +T
Sbjct: 204 CLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITS 263
Query: 71 -FS-SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASD--D 126
FS ++GKY+ S S D V +W + H+ V SV ++I ++ + D
Sbjct: 264 AFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLD 323
Query: 127 KVVKLW 132
K +++W
Sbjct: 324 KTIRIW 329
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 126 bits (305), Expect = 5e-29
Identities = 77/275 (28%), Positives = 131/275 (47%), Gaps = 5/275 (1%)
Query: 52 GTMRSYRFQGHDEAVMDVT-FSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRS 110
G++ + F V D+ +G A D + + P S + HS V S
Sbjct: 364 GSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYTLLLGHSGPVYS 423
Query: 111 VQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKS 170
FS G ++++S D ++LWST + + + GH V A+ S G ASCS D++
Sbjct: 424 ATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRT 483
Query: 171 TKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIH 230
++W++D I + + GH + WHP+ Y+A +S V+L+D++T V+ + H
Sbjct: 484 ARIWSMDR---IQPLRIMAGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGH 540
Query: 231 NEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSS 290
V +A+ P G Y+ + +DG + + DL I L GHN V ++++S G +S
Sbjct: 541 RSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLAS 600
Query: 291 AGDDKLVFIWK-TNFTDLSSESKENEGQNMITGQR 324
D V +W T+ T L+ ++N N + R
Sbjct: 601 GSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLR 635
Score = 109 bits (263), Expect = 7e-24
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 4/237 (1%)
Query: 55 RSYRFQ-GHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQF 113
RSY GH V TFS G ++ S+S D T+R+W + + +K H+ V QF
Sbjct: 409 RSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQF 468
Query: 114 SSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKL 173
S G + S D+ ++WS + + + GH + V N IA+ S DK+ +L
Sbjct: 469 SPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDWHPNCN---YIATGSSDKTVRL 525
Query: 174 WNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEA 233
W++ +GEC+ + + L LA P G Y+A G + ++D+ T + HN
Sbjct: 526 WDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSC 585
Query: 234 VTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSS 290
V ++ GS + + S D +K+ D+ + NG N + T T S+
Sbjct: 586 VWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKST 642
Score = 102 bits (244), Expect = 1e-21
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 3/202 (1%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
L GH + + ++P + +SS D ++ LW + ++GH+ V D FS G
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
Y AS S D+T RIW + H + V + + + I T S DK V+LW
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQT 530
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLA 196
+ + F+GH + V MS DG +AS +D + +W+L + CI L+
Sbjct: 531 GECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLS 590
Query: 197 WHPSGCYVAVATSHGNVKLYDI 218
+ G +A ++ VKL+D+
Sbjct: 591 YSGEGSLLASGSADCTVKLWDV 612
Score = 51.2 bits (117), Expect = 3e-06
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 142 SFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNL----------------DSGECI--- 182
+FV N + C+ +S+DGS++A D S K+W++ S + I
Sbjct: 347 TFVNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPN 406
Query: 183 --HTYKDLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQV 237
+Y L GH + P G +V +++ ++L+ + + + Y HN V
Sbjct: 407 GRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDA 466
Query: 238 AIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLV 297
P G Y + S D +I + P+ ++GH ++ V++ P + ++ DK V
Sbjct: 467 QFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTV 523
Query: 298 FIW 300
+W
Sbjct: 524 RLW 526
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMR 55
L GH + + +L Y+ +A+ S D +V LWD+ + +
Sbjct: 579 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTK 617
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 126 bits (305), Expect = 5e-29
Identities = 85/258 (32%), Positives = 127/258 (49%), Gaps = 12/258 (4%)
Query: 13 LKKQLKGHKNAITALYYN-PNDQQIATSSLDNSVLLWDLRGTMRSY-----RFQGHDEAV 66
LK + H + +TA+ N I TSS D S++LW L +SY R GH V
Sbjct: 7 LKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFV 66
Query: 67 MDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDD 126
DV SS G++ S S D +R+W ST F H++ V SV FS+D +I++AS D
Sbjct: 67 QDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 127 KVVKLWST-HKHKF-ISSFVGHTNWVRCARMSNDGSI--IASCSDDKSTKLWNLDSGECI 182
+ +KLW+T + K+ IS GH WV C R S + + I S S DK+ K+WNL + +
Sbjct: 127 RTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 183 HTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPS 242
+T G+ +A P G A G + L+D+ + YS+ ++
Sbjct: 187 NTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHSLCFSP 244
Query: 243 GSYILTASKDGKMKILDL 260
Y L A+ + ++I DL
Sbjct: 245 NRYWLCAATENSIRIWDL 262
Score = 92.3 bits (219), Expect = 1e-18
Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 17/261 (6%)
Query: 50 LRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTG-STGMFK----AH 104
L+GTM ++ D T + + ++SRDK++ +W T S G+ + H
Sbjct: 7 LKGTMCAHT----DMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGH 62
Query: 105 SQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIAS 164
S V+ V SSDG ++ S D ++LW + FVGHT V S D I S
Sbjct: 63 SHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVS 122
Query: 165 CSDDKSTKLWNLDSGECIHTYKDLKGHGLHLA---WHPSGCYVAVATSHGN--VKLYDIR 219
S D++ KLWN GEC +T + GH ++ + P+ + ++ + VK+++++
Sbjct: 123 ASRDRTIKLWNT-LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 181
Query: 220 THNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV 279
L + H+ + VA+ P GS + KDG + + DL EG +++L ++++
Sbjct: 182 NCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSL 240
Query: 280 NFSPTGDTFSSAGDDKLVFIW 300
FSP +A ++ + IW
Sbjct: 241 CFSPNRYWLCAATENS-IRIW 260
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 230 HNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFS 289
H+ V V + G + L+ S DG++++ DL G GH V +V FS
Sbjct: 62 HSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIV 121
Query: 290 SAGDDKLVFIWKT 302
SA D+ + +W T
Sbjct: 122 SASRDRTIKLWNT 134
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 124 bits (298), Expect = 4e-28
Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 10/284 (3%)
Query: 54 MRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW-VPTVTGSTGM----FKAHSQTV 108
+ S H+ AV V FSS G+ +ASAS DKT+R + + T+ F H +
Sbjct: 15 VHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGI 74
Query: 109 RSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDD 168
V FSSD I++ASDDK +KLW I + +GHTN+ C + ++I S S D
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFD 134
Query: 169 KSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRT-HNLVQYY 227
++ ++W++ +G+C+ + ++ G + ++ G +++D T H +
Sbjct: 135 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Query: 228 SIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVN--FSPT- 284
N V+ V P+G +IL + D +++ ++ + T +GH ++ FS T
Sbjct: 195 DDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTN 254
Query: 285 GDTFSSAGDDKLVFIWKTNFTDLSSESKENEGQNMITGQRHLTE 328
G S +D V +W+ N L + E + ++ H TE
Sbjct: 255 GKRIVSGSEDNCVHMWELNSKKL-LQKLEGHTETVMNVACHPTE 297
Score = 118 bits (284), Expect = 2e-26
Identities = 72/294 (24%), Positives = 140/294 (47%), Gaps = 11/294 (3%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRS------YRFQGHDEAVMDVT 70
L H A++++ ++ + + +A++S D ++ + + T+ F GH+ + DV
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTIN-TINDPIAEPVQEFTGHENGISDVA 78
Query: 71 FSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVK 130
FSS +++ SAS DKT+++W H+ V F+ + I++ S D+ V+
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 131 LWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
+W K + H++ V + DGS+I S S D ++W+ +G C+ T D +
Sbjct: 139 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 198
Query: 191 HGLHLA-WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEA---VTQVAIHPSGSYI 246
+ + P+G ++ V T ++L++I + ++ Y+ H A ++ +G I
Sbjct: 199 PPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRI 258
Query: 247 LTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
++ S+D + + +L + L GH V V PT + +S DK V IW
Sbjct: 259 VSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 105 bits (252), Expect = 1e-22
Identities = 67/247 (27%), Positives = 120/247 (48%), Gaps = 4/247 (1%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
++ GH+N I+ + ++ + + I ++S D ++ LWD+ GH V F+
Sbjct: 65 QEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQ 124
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
+ S S D+TVRIW T + AHS V +V F+ DGS I+++S D + ++W +
Sbjct: 125 SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDS 184
Query: 135 HKHKFISSFVGHTN-WVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG--H 191
+ + + N V R S +G I + D + +LWN+ S + + TY +
Sbjct: 185 GTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQY 244
Query: 192 GLHLAWHPSGCYVAVATSHGN-VKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTAS 250
+ A+ + V+ S N V ++++ + L+Q H E V VA HP+ + I + S
Sbjct: 245 CISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGS 304
Query: 251 KDGKMKI 257
D ++I
Sbjct: 305 LDKTVRI 311
Score = 87.8 bits (208), Expect = 3e-17
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 6/209 (2%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
L K L GH N + +NP I + S D +V +WD+ H + V V F+
Sbjct: 105 LIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN 164
Query: 73 SSGKYMASASRDKTVRIWVPTVTGS--TGMFKAHSQTVRSVQFSSDGSKIITASDDKVVK 130
G + S+S D RIW + TG + + V V+FS +G I+ + D ++
Sbjct: 165 RDGSLIVSSSYDGLCRIW-DSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLR 223
Query: 131 LWSTHKHKFISSFVGHTNWVRC---ARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKD 187
LW+ KF+ ++ GH N C A +G I S S+D +W L+S + + +
Sbjct: 224 LWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEG 283
Query: 188 LKGHGLHLAWHPSGCYVAVATSHGNVKLY 216
+++A HP+ +A + V+++
Sbjct: 284 HTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 77.4 bits (182), Expect = 4e-14
Identities = 54/174 (31%), Positives = 86/174 (49%), Gaps = 8/174 (4%)
Query: 6 VTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDE- 64
VTT + CLK L H + +TA+ +N + I +SS D +WD GT + DE
Sbjct: 142 VTTGK-CLKV-LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD-SGTGHCVKTLIDDEN 198
Query: 65 -AVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAH--SQTVRSVQFS-SDGSKI 120
V V FS +GK++ + D T+R+W + + H +Q S FS ++G +I
Sbjct: 199 PPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRI 258
Query: 121 ITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLW 174
++ S+D V +W + K + GHT V ++IAS S DK+ ++W
Sbjct: 259 VSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 57.2 bits (132), Expect = 5e-08
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 12 CLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT- 70
C+K + ++ + ++PN + I +LDN++ LW++ + GH A ++
Sbjct: 189 CVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISS 248
Query: 71 -FS-SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKV 128
FS ++GK + S S D V +W + H++TV +V + I + S DK
Sbjct: 249 AFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKT 308
Query: 129 VKLWSTHK 136
V++W+ K
Sbjct: 309 VRIWTQKK 316
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 122 bits (293), Expect = 2e-27
Identities = 82/258 (31%), Positives = 128/258 (49%), Gaps = 12/258 (4%)
Query: 13 LKKQLKGHKNAITALYYN-PNDQQIATSSLDNSVLLWDLRGTMRSY-----RFQGHDEAV 66
LK ++ H + +TA+ N I T+S D S++LW L +SY R GH V
Sbjct: 7 LKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFV 66
Query: 67 MDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDD 126
DV SS G++ S S D +R+W +T F H++ V SV FS+D +I++AS D
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 127 KVVKLWST-HKHKF-ISSFVGHTNWVRCARMSNDGSI--IASCSDDKSTKLWNLDSGECI 182
+ +KLW+T + K+ IS GH WV C R S + + I S S DK+ K+WNL + +
Sbjct: 127 RTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 183 HTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPS 242
++ G+ +A P G A G + L+D+ + YS+ ++
Sbjct: 187 NSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHSLCFSP 244
Query: 243 GSYILTASKDGKMKILDL 260
Y L A+ + ++I DL
Sbjct: 245 NRYWLCAATENSIRIWDL 262
Score = 95.1 bits (226), Expect = 2e-19
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 25/285 (8%)
Query: 50 LRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTG-STGMFK----AH 104
L+G MR++ D T + + +ASRDK++ +W T S G+ + H
Sbjct: 7 LKGIMRAHT----DIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGH 62
Query: 105 SQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIAS 164
S V V SSDG ++ S D ++LW + FVGHT V S D I S
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVS 122
Query: 165 CSDDKSTKLWNLDSGECIHTYKDLKGHGLHLA---WHPSGCYVAVATSHGN--VKLYDIR 219
S D++ KLWN GEC +T + GH ++ + P+ + ++ + VK+++++
Sbjct: 123 ASRDRTIKLWNT-LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 181
Query: 220 THNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV 279
L H+ + VA+ P GS + KDG + + DL EG +++L ++++
Sbjct: 182 NCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSL 240
Query: 280 NFSPTGDTFSSAGDDKLVFIWKTNF--------TDLSSESKENEG 316
FSP +A ++ + IW DL SE+++NEG
Sbjct: 241 CFSPNRYWLCAATENS-IRIWDLESKSVVEDLKVDLKSEAEKNEG 284
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 120 bits (289), Expect = 5e-27
Identities = 83/259 (32%), Positives = 123/259 (47%), Gaps = 13/259 (5%)
Query: 13 LKKQLKGHKNAITALYYN-PNDQQIATSSLDNSVLLWDLRGTMRSY-----RFQGHDEAV 66
LK ++ H + +TA+ N I ++S D S++LW L ++Y R GH V
Sbjct: 7 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFV 66
Query: 67 MDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDD 126
DV SS G++ S S D +R+W ST F H++ V SV FS D +I++AS D
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD 126
Query: 127 KVVKLWST---HKHKFISSFVGHTNWVRCARMSND--GSIIASCSDDKSTKLWNLDSGEC 181
+ +KLW+T K+ GH +WV C R S + I S S DK+ K+WNL + +
Sbjct: 127 RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL 186
Query: 182 IHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHP 241
T G+ +A P G A G V L+D+ + YS+ +V
Sbjct: 187 RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK--KLYSLEANSVIHALCFS 244
Query: 242 SGSYILTASKDGKMKILDL 260
Y L A+ + +KI DL
Sbjct: 245 PNRYWLCAATEHGIKIWDL 263
Score = 93.5 bits (222), Expect = 6e-19
Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 21/247 (8%)
Query: 50 LRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGST-GMFK----AH 104
L+GTMR++ D T + + SASRDK++ +W T G+ + H
Sbjct: 7 LKGTMRAHT----DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGH 62
Query: 105 SQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIAS 164
S V V SSDG ++ S D ++LW FVGHT V S D I S
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVS 122
Query: 165 CSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAW------HPSGCYVAVATSHGN--VKLY 216
S D++ KLWN GEC +T + G G H W P+ + ++ + VK++
Sbjct: 123 ASRDRTIKLWNT-LGECKYTISE-GGEG-HRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 179
Query: 217 DIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPV 276
++ L + H V+ VA+ P GS + KDG + + DL EG +++L N +
Sbjct: 180 NLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVI 238
Query: 277 NAVNFSP 283
+A+ FSP
Sbjct: 239 HALCFSP 245
Score = 68.9 bits (161), Expect = 1e-11
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 99 GMFKAHSQTVRSVQFSSDGSKII-TASDDKVVKLWSTHKHKFISS-----FVGHTNWVRC 152
G +AH+ V ++ D + II +AS DK + LW K GH+++V
Sbjct: 9 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVED 68
Query: 153 ARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGN 212
+S+DG S S D +LW+L +G + L +A+ + A+
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRT 128
Query: 213 VKLYDIR---THNLVQYYSIHNEAVTQVAIHPSGSY--ILTASKDGKMKILDLLEGHPIF 267
+KL++ + + + H + V+ V P+ I++AS D +K+ +L
Sbjct: 129 IKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS 188
Query: 268 TLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
TL+GH G V+ V SP G +S G D +V +W
Sbjct: 189 TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW 221
Score = 42.3 bits (95), Expect = 0.001
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 230 HNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFS 289
H+ V V + G + L+ S DG++++ DL G GH V +V FS
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIV 121
Query: 290 SAGDDKLVFIWKT 302
SA D+ + +W T
Sbjct: 122 SASRDRTIKLWNT 134
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 119 bits (286), Expect = 1e-26
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 16/298 (5%)
Query: 15 KQLKGHKNA----ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT 70
K KG N +T L +N +AT S D +W L G + S H + +
Sbjct: 314 KHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGELIS-TLSKHKGPIFSLK 372
Query: 71 FSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVK 130
++ G Y+ + S D+T +W F+ HS V + ++ S T+S D ++
Sbjct: 373 WNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDSMIY 431
Query: 131 LWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
L + + +F GH V C + GS++ASCSDD + K+WN+ +H ++
Sbjct: 432 LCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTK 491
Query: 191 HGLHLAWHPSG---------CYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHP 241
+ W P+G +A A+ VKL+D ++ ++ H E V +A P
Sbjct: 492 EIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSP 551
Query: 242 SGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFI 299
+G YI + S D + I + EG + T +G NG + V ++ G+ ++ D V +
Sbjct: 552 NGEYIASGSLDKSIHIWSIKEGKIVKTYTG-NGGIFEVCWNKEGNKIAACFADNSVCV 608
Score = 83.8 bits (198), Expect = 5e-16
Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 33/259 (12%)
Query: 60 QGHDEAVMDVTFSSSGKYMASASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSSDGS 118
+GH V +S S +AS S D T RIW +P G FKA T R++ +
Sbjct: 262 EGHTSEVCACAWSPSASLLASGSGDATARIWSIPE-----GSFKA-VHTGRNIN-----A 310
Query: 119 KIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDS 178
I+ + K S K K +++ +W + +G+++A+ S D ++W L+
Sbjct: 311 LILKHAKGK-----SNEKSKDVTTL----DW------NGEGTLLATGSCDGQARIWTLN- 354
Query: 179 GECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVA 238
GE I T KG L W+ G Y+ + ++D++ Q + H+ V
Sbjct: 355 GELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVD 414
Query: 239 IHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVF 298
+ S+ T+S D + + + E P T +GH G VN V + PTG +S DD
Sbjct: 415 WRNNVSFA-TSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAK 473
Query: 299 IW----KTNFTDLSSESKE 313
IW T DL +KE
Sbjct: 474 IWNIKQSTFVHDLREHTKE 492
Score = 82.6 bits (195), Expect = 1e-15
Identities = 69/311 (22%), Positives = 132/311 (42%), Gaps = 30/311 (9%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDL-RGTMRSYRFQGHDEAVM-------- 67
L+GH + + A ++P+ +A+ S D + +W + G+ ++ + A++
Sbjct: 261 LEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKS 320
Query: 68 -----DVT---FSSSGKYMASASRDKTVRIWVPTVTGST-GMFKAHSQTVRSVQFSSDGS 118
DVT ++ G +A+ S D RIW T+ G H + S++++ G
Sbjct: 321 NEKSKDVTTLDWNGEGTLLATGSCDGQARIW--TLNGELISTLSKHKGPIFSLKWNKKGD 378
Query: 119 KIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDS 178
++T S D+ +W ++ F H+ N+ S A+ S D L +
Sbjct: 379 YLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSF-ATSSTDSMIYLCKIGE 437
Query: 179 GECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVA 238
T+ +G + W P+G +A + K+++I+ V H + + +
Sbjct: 438 TRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIR 497
Query: 239 IHPSGS---------YILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFS 289
P+G + +AS D +K+ D G + + +GH PV ++ FSP G+ +
Sbjct: 498 WSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIA 557
Query: 290 SAGDDKLVFIW 300
S DK + IW
Sbjct: 558 SGSLDKSIHIW 568
Score = 43.6 bits (98), Expect = 6e-04
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 26/175 (14%)
Query: 145 GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYV 204
GHT+ V S S++AS S D + ++W++ G ++K +H + + +
Sbjct: 263 GHTSEVCACAWSPSASLLASGSGDATARIWSIPEG----SFK-----AVHTGRNINALIL 313
Query: 205 AVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGH 264
A N K D VT + + G+ + T S DG+ +I L G
Sbjct: 314 KHAKGKSNEKSKD----------------VTTLDWNGEGTLLATGSCDGQARIWTL-NGE 356
Query: 265 PIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEGQNM 319
I TLS H GP+ ++ ++ GD + D+ +W + + + + G +
Sbjct: 357 LISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTL 411
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 116 bits (280), Expect = 6e-26
Identities = 78/293 (26%), Positives = 127/293 (43%), Gaps = 11/293 (3%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTFSSSG 75
L GH +A+ + +NP IA+ S D + LW + G +++ +GH A++D+ ++S G
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 76 KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK-IITASDDKVVKLWST 134
+ SAS DKTVR W HS V S + G II+ SDD KLW
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDM 168
Query: 135 HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH 194
+ I +F + S+ I + D K+W+L GE T + +
Sbjct: 169 RQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITG 227
Query: 195 LAWHPSGCYVAVATSHGNVKLYDIRTH----NLVQYYSIHN----EAVTQVAIHPSGSYI 246
++ P G Y+ + ++D+R + V+ + H + + + + P G+ +
Sbjct: 228 MSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKV 287
Query: 247 LTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFI 299
S D + I D I+ L GH G VN F PT S DK +++
Sbjct: 288 TAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
Score = 115 bits (276), Expect = 2e-25
Identities = 73/254 (28%), Positives = 121/254 (47%), Gaps = 15/254 (5%)
Query: 61 GHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMF---KAHSQTVRSVQFSSDG 117
GH AV + F+ +G +AS S D+ + +W V G F K H + + ++SDG
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLW--RVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVR-CARMSNDGSIIASCSDDKSTKLWNL 176
S+I++AS DK V+ W K I H+++V C +I S SDD + KLW++
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDM 168
Query: 177 DSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQ 236
I T+ D K +++ + + +VK++D+R H + +T
Sbjct: 169 RQRGAIQTFPD-KYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITG 227
Query: 237 VAIHPSGSYILTASKDGKMKILDLLEGHP------IFTLSGHNGPVNAV--NFSPTGDTF 288
+++ P GSY+LT D K+ + D+ P IF HN N + ++SP G
Sbjct: 228 MSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKV 287
Query: 289 SSAGDDKLVFIWKT 302
++ D++V IW T
Sbjct: 288 TAGSSDRMVHIWDT 301
Score = 60.9 bits (141), Expect = 4e-09
Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 11/192 (5%)
Query: 36 IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVT 95
I + S D + LWD+R F + + V+FS + + + D V++W
Sbjct: 154 IISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLRKG 212
Query: 96 GSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTH----KHKFISSFVGHT---- 147
+T + H T+ + S DGS ++T D + +W +++ + F GH
Sbjct: 213 EATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFE 272
Query: 148 -NWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAV 206
N ++C+ S DG+ + + S D+ +W+ S I+ G +HP+ +
Sbjct: 273 KNLLKCS-WSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGS 331
Query: 207 ATSHGNVKLYDI 218
+S N+ L +I
Sbjct: 332 CSSDKNIYLGEI 343
Score = 37.9 bits (84), Expect = 0.032
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 265 PIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
PI LSGH V + F+P G +S D+ +F+W+ +
Sbjct: 45 PIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH 83
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 114 bits (274), Expect = 3e-25
Identities = 73/297 (24%), Positives = 130/297 (43%), Gaps = 3/297 (1%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTFSSSGKY 77
G +T ++ + + +AT SL LW++ + + H E DV FS
Sbjct: 253 GDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDC 312
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKH 137
+A+AS D+T ++W T F+ H + V F G + T S DK +LW +
Sbjct: 313 LATASADRTAKLWKTDGT-LLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTG 371
Query: 138 KFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAW 197
+ GH+ V DG++ ASC D ++W+L +G I ++ + +
Sbjct: 372 AELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNF 431
Query: 198 HPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYIL-TASKDGKMK 256
P+G ++A +++D+R + H V+QV P Y L TAS D K+
Sbjct: 432 SPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVN 491
Query: 257 ILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKE 313
I + + +L+GH V +++ + ++ D+ + +W ++ D E KE
Sbjct: 492 IWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKE 548
Score = 111 bits (268), Expect = 2e-24
Identities = 67/242 (27%), Positives = 113/242 (46%), Gaps = 2/242 (0%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
LK HK T + ++P D +AT+S D + LW GT+ F+GH + + V F SGK
Sbjct: 294 LKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQ-TFEGHLDRLARVAFHPSGK 352
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
Y+ + S DKT R+W + + HS++V + F DG+ + D + ++W
Sbjct: 353 YLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRT 412
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLA 196
+ I F GH V S +G +AS +D ++W+L + ++ +
Sbjct: 413 GRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVK 472
Query: 197 WHP-SGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKM 255
+ P G ++A A+ V ++ R +LV+ + H V + I S I T S D +
Sbjct: 473 YEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTI 532
Query: 256 KI 257
K+
Sbjct: 533 KL 534
Score = 93.9 bits (223), Expect = 5e-19
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKY 77
+GH ++ + + + A+ LD+ +WDLR FQGH + V V FS +G +
Sbjct: 378 EGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYH 437
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFS-SDGSKIITASDDKVVKLWSTHK 136
+AS D RIW + S + AH+ V V++ +G + TAS D V +WS
Sbjct: 438 LASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRD 497
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLW 174
+ S GH + V ++ D S IA+ S D++ KLW
Sbjct: 498 FSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 84.2 bits (199), Expect = 4e-16
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 4/188 (2%)
Query: 5 KVTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDE 64
K+ + L + +GH + + + ++P+ + + T+S D + LWD+ +GH
Sbjct: 323 KLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSR 382
Query: 65 AVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS 124
+V + F G AS D R+W S +F+ H + V SV FS +G + +
Sbjct: 383 SVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGG 442
Query: 125 DDKVVKLWSTHKHKFISSFVGHTNWVRCARMS-NDGSIIASCSDDKSTKLWNLDSGECIH 183
+D ++W K + H N V + +G +A+ S D +W SG
Sbjct: 443 EDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIW---SGRDFS 499
Query: 184 TYKDLKGH 191
K L GH
Sbjct: 500 LVKSLAGH 507
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 113 bits (271), Expect = 7e-25
Identities = 80/320 (25%), Positives = 151/320 (47%), Gaps = 20/320 (6%)
Query: 1 MMEDKVTTPEPCLKKQLK-GHKNAITALYYNPNDQQIATSSLDNSVLLWD-LRGTMRS-- 56
M +D T L +K G K+ ++P+ Q +A+SS+D + +WD + G ++
Sbjct: 192 MKQDVEDTHPNVLTHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDL 251
Query: 57 -YR----FQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSV 111
Y+ F HD+ V+ + FS + +AS S+D ++IW F AHSQ V S+
Sbjct: 252 QYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSL 311
Query: 112 QFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKST 171
FS DGS++++ S D+ ++ K + F GHT++V A ++DGS I + S D +
Sbjct: 312 SFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTV 371
Query: 172 KLWNLDSGECIHTYK--------DLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNL 223
K+W+ + +C+ T+K D + +HL + + ++ V ++ + ++ +
Sbjct: 372 KVWDSKTTDCLQTFKPPPPLRGTDASVNSIHL-FPKNTEHIVVCNKTSSIYIMTLQGQVV 430
Query: 224 VQYYSIHNEAVTQVA--IHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNF 281
+ S + E VA + G +I +D K+ + G + H V +
Sbjct: 431 KSFSSGNREGGDFVAACVSTKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITH 490
Query: 282 SPTGDTFSSAGDDKLVFIWK 301
P + ++ +D + +WK
Sbjct: 491 HPHRNLLATYSEDCTMKLWK 510
Score = 68.1 bits (159), Expect = 3e-11
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 134 THKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGL 193
TH KF G + CAR S DG +AS S D ++W+ SG+ +
Sbjct: 205 THTIKF-----GKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESF 259
Query: 194 HLAWHPSGCY--------VAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSY 245
+ P C +A + G +K++ IRT ++ + H++ VT ++ GS
Sbjct: 260 MMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQ 319
Query: 246 ILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFT 305
+L+ S D +I L G + GH VN F+ G +A D V +W + T
Sbjct: 320 LLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTT 379
Query: 306 D 306
D
Sbjct: 380 D 380
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 110 bits (265), Expect = 4e-24
Identities = 82/325 (25%), Positives = 150/325 (46%), Gaps = 17/325 (5%)
Query: 1 MMEDKVTTPEPCLKKQLKGHKNAITALYYNPNDQQ---IATSSLDNSVLLWDLRGTMRSY 57
M + KVT P+ C GH + L+Y+P + ++S D+ +L +
Sbjct: 1 MEKKKVTIPQVC-----HGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIG 55
Query: 58 RFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
F+GH AV ++ ASAS D + ++W +TG H VR+ FS D
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLW-DALTGDVLHSFEHKHIVRACAFSEDT 114
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHT-NWVRCAR-MSNDGSIIASCSDDKSTKLWN 175
++T +K+++++ ++ + V + +R + +D +I++SC+D +LW+
Sbjct: 115 KSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWD 174
Query: 176 LDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVT 235
+ SG+ + T + K G Y+ A VK +D LV+ Y + +
Sbjct: 175 VRSGKIVQTL-ETKSPVTSAEVSQDGRYITTADG-STVKFWDANHFGLVKSYDMPCN-IE 231
Query: 236 QVAIHP-SGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDD 294
++ P SG + +D +++ D G I GH+GPV+ V F+PTG +++S +D
Sbjct: 232 SASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSED 291
Query: 295 KLVFIWKTNFTDLSSESKENEGQNM 319
+ IW+T T + E E + +
Sbjct: 292 GTIRIWQT--TPANPEENETSSRRV 314
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 110 bits (265), Expect = 4e-24
Identities = 82/325 (25%), Positives = 150/325 (46%), Gaps = 17/325 (5%)
Query: 1 MMEDKVTTPEPCLKKQLKGHKNAITALYYNPNDQQ---IATSSLDNSVLLWDLRGTMRSY 57
M + KVT P+ C GH + L+Y+P + ++S D+ +L +
Sbjct: 1 MEKKKVTIPQVC-----HGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIG 55
Query: 58 RFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
F+GH AV ++ ASAS D + ++W +TG H VR+ FS D
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLW-DALTGDVLHSFEHKHIVRACAFSEDT 114
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHT-NWVRCAR-MSNDGSIIASCSDDKSTKLWN 175
++T +K+++++ ++ + V + +R + +D +I++SC+D +LW+
Sbjct: 115 KSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWD 174
Query: 176 LDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVT 235
+ SG+ + T + K G Y+ A VK +D LV+ Y + +
Sbjct: 175 VRSGKIVQTL-ETKSPVTSAEVSQDGRYITTADG-STVKFWDANHFGLVKSYDMPCN-IE 231
Query: 236 QVAIHP-SGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDD 294
++ P SG + +D +++ D G I GH+GPV+ V F+PTG +++S +D
Sbjct: 232 SASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSED 291
Query: 295 KLVFIWKTNFTDLSSESKENEGQNM 319
+ IW+T T + E E + +
Sbjct: 292 GTIRIWQT--TPANPEENETSSRRV 314
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 110 bits (264), Expect = 5e-24
Identities = 86/341 (25%), Positives = 158/341 (46%), Gaps = 20/341 (5%)
Query: 1 MMEDKVTTPEPCLKKQLKGHKNAITALYYNPNDQQ---IATSSLDNSVLLWDLRGTMRSY 57
M + KV TP C GH + L+Y+P + ++S D+ +L +
Sbjct: 1 MEKKKVATPLVC-----HGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIG 55
Query: 58 RFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
F+GH AV ++ ASAS D + ++W +TG H VR+ FS D
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLW-DALTGDVLHSFEHKHIVRACAFSQDT 114
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHT-NWVRCAR-MSNDGSIIASCSDDKSTKLWN 175
+IT +K+++++ ++ + + + +R + D +I++SC+D +LW+
Sbjct: 115 KYLITGGFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWD 174
Query: 176 LDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVT 235
+ SG+ + T + K G Y+ A VK +D LV+ Y + +
Sbjct: 175 VRSGKIVQTL-ETKSPVTSAEVSQDGRYITTADG-STVKFWDANHFGLVKSYDMPCN-IE 231
Query: 236 QVAIHP-SGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDD 294
++ P SG+ + +D +++ D G I GH+GPV+ V F+PTG++++S +D
Sbjct: 232 SASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSED 291
Query: 295 KLVFIWKTNFTDLS--SESKENEGQNMITGQ---RHLTEEG 330
+ IW+T + SESK + + + + H+ +EG
Sbjct: 292 GTIRIWQTGPVNPEEISESKPKQSVDEVARKIEGFHINKEG 332
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 105 bits (252), Expect = 1e-22
Identities = 74/299 (24%), Positives = 139/299 (46%), Gaps = 10/299 (3%)
Query: 19 GHKNAITALYYNPNDQQ---IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSG 75
GH + + Y+P + ++S D++ +L + F+GH AV + +
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNA 68
Query: 76 KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTH 135
ASAS D T +IW +TG H VR+ FS D +++T +K+++++ +
Sbjct: 69 IRAASASADFTAKIW-NALTGDELHSFEHKHIVRACAFSEDTHRLLTGGMEKILRIFDLN 127
Query: 136 KHKFISSFVGHT-NWVRCAR-MSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGL 193
+ VG++ +R + +D +I++SC+D +LW++ S + +HT + K
Sbjct: 128 RPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHTL-ETKSPVT 186
Query: 194 HLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPS-GSYILTASKD 252
G Y+ A +VK +D + L++ Y + V ++ P G+ + +D
Sbjct: 187 SAEVSQDGRYITTADG-SSVKFWDAKNFGLLKSYDMPCN-VESASLEPKHGNTFIAGGED 244
Query: 253 GKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSES 311
+ D G I GH+GPV+ V ++P G++++S +D V IW + ES
Sbjct: 245 MWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEES 303
Score = 53.6 bits (123), Expect = 6e-07
Identities = 58/260 (22%), Positives = 111/260 (42%), Gaps = 9/260 (3%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKY 77
+GHK A+ + + N + A++S D + +W+ + F+ H V FS
Sbjct: 53 EGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFE-HKHIVRACAFSEDTHR 111
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQ-TVRSVQF-SSDGSKIITASDDKVVKLWSTH 135
+ + +K +RI+ + +S ++R+V++ SD + + + +D ++LW
Sbjct: 112 LLTGGMEKILRIFDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIR 171
Query: 136 KHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHL 195
K + + + V A +S DG I + +D S K W+ + + +Y D+ +
Sbjct: 172 SDKIVHTLETKSP-VTSAEVSQDGRYITT-ADGSSVKFWDAKNFGLLKSY-DMPCNVESA 228
Query: 196 AWHPSGCYVAVATSHGN-VKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGK 254
+ P +A V +D +T + H+ V V P G + S+DG
Sbjct: 229 SLEPKHGNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGT 288
Query: 255 MKILDL-LEGHP-IFTLSGH 272
++I + HP LSGH
Sbjct: 289 VRIWVVGSVNHPEESNLSGH 308
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 103 bits (248), Expect = 4e-22
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 1/213 (0%)
Query: 101 FKAHSQTVRSVQFSSDGSKI-ITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDG 159
F AHS V + S++ IT DD V LW+ K + S GHT+ V +
Sbjct: 11 FLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAE 70
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIR 219
++ + + KLW+++ + + + + + + +HP G ++A +S N+K++DIR
Sbjct: 71 VLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIR 130
Query: 220 THNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV 279
+Q Y H+ ++ + P G ++++ D +K+ DL G + H GP+ ++
Sbjct: 131 KKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSL 190
Query: 280 NFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESK 312
+F P ++ D+ V W +L ++
Sbjct: 191 DFHPLEFLLATGSADRTVKFWDLETFELIGSTR 223
Score = 91.5 bits (217), Expect = 2e-18
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 1/220 (0%)
Query: 38 TSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGS 97
T D V LW + GH AV V F S+ + + + +++W
Sbjct: 33 TGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKM 92
Query: 98 TGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSN 157
F H +V+F G + + S D +K+W K I ++ GH+ + R +
Sbjct: 93 VRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTP 152
Query: 158 DGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYD 217
DG + S D K+W+L +G+ +H +K +G L +HP +A ++ VK +D
Sbjct: 153 DGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
Query: 218 IRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
+ T L+ V + HP G L D +K+
Sbjct: 213 LETFELIGSTRPEATGVRSIKFHPDGR-TLFCGLDDSLKV 251
Score = 89.4 bits (212), Expect = 1e-17
Identities = 47/192 (24%), Positives = 89/192 (46%)
Query: 10 EPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDV 69
+P L GH +A+ ++ ++ + + + + LWD+ F GH V
Sbjct: 47 KPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAV 106
Query: 70 TFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVV 129
F G+++AS S D ++IW G +K HS+ + +++F+ DG +++ D VV
Sbjct: 107 EFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVV 166
Query: 130 KLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLK 189
K+W K + F H +R ++A+ S D++ K W+L++ E I + +
Sbjct: 167 KVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEA 226
Query: 190 GHGLHLAWHPSG 201
+ +HP G
Sbjct: 227 TGVRSIKFHPDG 238
Score = 80.2 bits (189), Expect = 6e-15
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
Query: 10 EPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDV 69
E + + GH++ +A+ ++P + +A+ S D ++ +WD+R ++GH + +
Sbjct: 89 EAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTI 148
Query: 70 TFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVV 129
F+ G+++ S D V++W T FK H +RS+ F + T S D+ V
Sbjct: 149 RFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTV 208
Query: 130 KLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGEC 181
K W + I S VR + DG + C D S K+++ + C
Sbjct: 209 KFWDLETFELIGSTRPEATGVRSIKFHPDGRTL-FCGLDDSLKVYSWEPVVC 259
Score = 74.5 bits (175), Expect = 3e-13
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 140 ISSFVGHTNWVRCARMSNDGS-IIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWH 198
+ F+ H+ V C + S + + DD LW + + + +A+
Sbjct: 8 LQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFD 67
Query: 199 PSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKIL 258
+ V S G +KL+D+ +V+ ++ H + V HP G ++ + S D +KI
Sbjct: 68 SAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIW 127
Query: 259 DLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEG 316
D+ + I T GH+ ++ + F+P G S G D +V +W L E K +EG
Sbjct: 128 DIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEG 185
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 102 bits (245), Expect = 1e-21
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 2/223 (0%)
Query: 101 FKAHSQTVRSVQFSSDGSKI-ITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDG 159
F AHS V ++ S++ +T +D V LW+ K I S GH++ +
Sbjct: 105 FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASE 164
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIR 219
++A+ + + KLW+L+ + + T + + + + +HP G + A + N+K++DIR
Sbjct: 165 GLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIR 224
Query: 220 THNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV 279
+ Y H V + P G +I++ +D +K+ DL G + H G + ++
Sbjct: 225 KKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSL 284
Query: 280 NFSPTGDTFSSAGDDKLVFIWK-TNFTDLSSESKENEGQNMIT 321
+F P ++ DK V W F + S E G +T
Sbjct: 285 DFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLT 327
Score = 99 bits (238), Expect = 7e-21
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 1/234 (0%)
Query: 15 KQLKGHKNAITALYYNPNDQQI-ATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSS 73
++ H A+ L ++ T D+ V LW + GH + VTF +
Sbjct: 103 REFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDA 162
Query: 74 SGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
S +A+ + T+++W H SV F G + S D +K+W
Sbjct: 163 SEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWD 222
Query: 134 THKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGL 193
K I ++ GHT V R + DG I S +D K+W+L +G+ +H +K +G
Sbjct: 223 IRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQ 282
Query: 194 HLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYIL 247
L +HP +A ++ VK +D+ T L+ V + +P G +L
Sbjct: 283 SLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVL 336
Score = 89.0 bits (211), Expect = 1e-17
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
+ L GH++ ++ ++P + A+ SLD ++ +WD+R + ++GH V + F+
Sbjct: 188 RTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPD 247
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
G+++ S D V++W T FK+H ++S+ F + T S DK VK W
Sbjct: 248 GRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDL 307
Query: 135 HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGEC 181
+ I S T VRC + DG + C +S K+++ + C
Sbjct: 308 ETFELIGSGGTETTGVRCLTFNPDGKSVL-CGLQESLKIFSWEPIRC 353
Score = 34.7 bits (76), Expect = 0.30
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHD-EAVMDVTF 71
L + K H+ I +L ++P++ +AT S D +V WDL T G + V +TF
Sbjct: 270 LLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLE-TFELIGSGGTETTGVRCLTF 328
Query: 72 SSSGK 76
+ GK
Sbjct: 329 NPDGK 333
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 102 bits (244), Expect = 1e-21
Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 8/289 (2%)
Query: 19 GHKNAITALYYNPNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKY 77
GHK + AL +P D +AT D+ LW + + GH ++V + FS G+
Sbjct: 68 GHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQL 127
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKH 137
+AS D V+I+ + + + V++ G ++ S+D + +W+ K
Sbjct: 128 LASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKE 187
Query: 138 KFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGH--GLHL 195
+++ F GH V C + DG +I + SDD S +WN + E IH K H GL
Sbjct: 188 AYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTC 247
Query: 196 AWHPSGCYVAVATS-HGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYI---LTASK 251
S +A++ S G+V + +I T +V + H ++V V PS + I T
Sbjct: 248 LDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGM 307
Query: 252 DGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
D K+ I DL P F + H V ++ + T ++ + V IW
Sbjct: 308 DKKLIIWDLQHSTPRF-ICEHEEGVTSLTWIGTSKYLATGCANGTVSIW 355
Score = 101 bits (243), Expect = 2e-21
Identities = 71/295 (24%), Positives = 136/295 (46%), Gaps = 9/295 (3%)
Query: 16 QLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLR-GTMRSYRFQGHDEAVMDVTFSSS 74
+L GHK++++ L ++ + Q +A+ LD V ++D GT++ G + V +
Sbjct: 108 ELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCV-LDGPGAGIEWVRWHPR 166
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
G + + S D ++ +W MF H+ V F+ DG I T SDD + +W+
Sbjct: 167 GHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNP 226
Query: 135 HKHKFISSFVG---HTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGH 191
+ I G HT + C ++++ S+ S S D S + N+ +G+ + +
Sbjct: 227 KTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDS 286
Query: 192 GLHLAWHPSGCYVAVATSHGNVK---LYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILT 248
+ + PS + +A + G K ++D++ H+ ++ H E VT + + Y+ T
Sbjct: 287 VECVKFSPSSATIPLAATGGMDKKLIIWDLQ-HSTPRFICEHEEGVTSLTWIGTSKYLAT 345
Query: 249 ASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
+G + I D L G+ + T GH V A++ S D S D +++++
Sbjct: 346 GCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESS 400
Score = 84.2 bits (199), Expect = 4e-16
Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 7/256 (2%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
LK L G I + ++P + S D S+ +W+ F GH+ V F+
Sbjct: 147 LKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFT 206
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAH---SQTVRSVQFSSDGSKIITASDDKVV 129
GK + + S D ++ +W P S + K H ++ + + +S+ S I+ S D V
Sbjct: 207 PDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSV 266
Query: 130 KLWSTHKHKFISSFVGHTNWVRCARMSNDGSII---ASCSDDKSTKLWNLDSGECIHTYK 186
+ + K +SS HT+ V C + S + I A+ DK +W+L +
Sbjct: 267 HIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICE 326
Query: 187 DLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYI 246
+G L W + Y+A ++G V ++D N V Y H +AV +++ + +I
Sbjct: 327 HEEGV-TSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFI 385
Query: 247 LTASKDGKMKILDLLE 262
++ S D ++ + E
Sbjct: 386 VSVSVDNTARVFESSE 401
Score = 59.3 bits (137), Expect = 1e-08
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 3/178 (1%)
Query: 97 STGMFKAHSQTVRSVQFS-SDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARM 155
S F H + ++ S +D + + T D LW + + GH + V C
Sbjct: 62 SVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAF 121
Query: 156 SNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH-LAWHPSGCYVAVATSHGNVK 214
S DG ++AS D ++++ SG + D G G+ + WHP G V + ++
Sbjct: 122 SYDGQLLASGGLDGVVQIFDASSG-TLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLW 180
Query: 215 LYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGH 272
+++ + +S HN VT P G I T S D + + + I + GH
Sbjct: 181 MWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGH 238
Score = 33.9 bits (74), Expect = 0.52
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 266 IFTLSGHNGPVNAVNFSPTGDTF--SSAGDDKLVFIWKTNFTDLSSE 310
+ T +GH G + A+ SPT T + GDDK F+WK D ++E
Sbjct: 63 VHTFTGHKGELYALACSPTDATLVATGGGDDK-AFLWKIGNGDWAAE 108
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 100 bits (239), Expect = 5e-21
Identities = 85/295 (28%), Positives = 132/295 (44%), Gaps = 23/295 (7%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
+ GH A+ + ++P+ +Q+A+ S D +V LWDL + +GH V+ V +S GK
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGK 164
Query: 77 YMASASRDKTVRIWVPTVTGSTGM-FKAHSQTV-----RSVQFSSDGSKIITASDDKVVK 130
++ S S+ + W P G H + + V SS + +T+S D +
Sbjct: 165 HLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDAR 224
Query: 131 LWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
+W K I GHT V C + DG II + S D + K+W G+ I ++LKG
Sbjct: 225 IWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLI---RELKG 280
Query: 191 HGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIH----PSGSYI 246
HG H W S +A++T + V H QY + + S +
Sbjct: 281 HG-H--WINS---LALSTEY--VLRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSPERL 332
Query: 247 LTASKDGKMKILD-LLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
++ S D M + + + P L+GH VN V FSP G +SA DK V +W
Sbjct: 333 VSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLW 387
Score = 91.1 bits (216), Expect = 3e-18
Identities = 68/300 (22%), Positives = 120/300 (40%), Gaps = 15/300 (5%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWD-LRGTMRSYRFQGHDEAVMDVTF----- 71
KGHKN + + ++P+ + + + S + W+ +G + GH + + +++
Sbjct: 148 KGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHL 207
Query: 72 SSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKL 131
SS + ++S+D RIW T+ S H+ V V++ DG I T S D +K+
Sbjct: 208 SSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKM 266
Query: 132 WSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLW-NLDSGECIHTYKDLKG 190
W T + K I GH +W+ +S + + D + N + + + Y KG
Sbjct: 267 WETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPNEEKQKALERYNKTKG 326
Query: 191 HGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTAS 250
S + K R H + V V P G +I +AS
Sbjct: 327 DSPERLVSGSDDFTMFLWEPSVSKQPKKRLTG-------HQQLVNHVYFSPDGKWIASAS 379
Query: 251 KDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSE 310
D +++ + + G + GH GPV V++S S D + IW+ L +
Sbjct: 380 FDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQD 439
Score = 83.0 bits (196), Expect = 9e-16
Identities = 75/293 (25%), Positives = 127/293 (43%), Gaps = 18/293 (6%)
Query: 17 LKGHKNAITALYYNPND-----QQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTF 71
L GHK IT + + P ++ TSS D +WD+ GH AV V +
Sbjct: 190 LTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKW 249
Query: 72 SSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKL 131
G + + S+D T+++W T K H + S+ S++ + T + D +
Sbjct: 250 GGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE-YVLRTGAFDHTGRQ 307
Query: 132 WSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGH 191
+ ++ K + N + + + S SDD + LW + K L GH
Sbjct: 308 YPPNEEK--QKALERYNKTK----GDSPERLVSGSDDFTMFLWEPSVSK--QPKKRLTGH 359
Query: 192 GL---HLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILT 248
H+ + P G ++A A+ +V+L++ T V + H V QV+ +L+
Sbjct: 360 QQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLS 419
Query: 249 ASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
SKD +KI ++ L GH V AV++SP G+ S G D+++ +WK
Sbjct: 420 GSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 83.0 bits (196), Expect = 9e-16
Identities = 40/120 (33%), Positives = 70/120 (58%), Gaps = 2/120 (1%)
Query: 14 KKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWD-LRGTMRSYRFQGHDEAVMDVTFS 72
KK+L GH+ + +Y++P+ + IA++S D SV LW+ + G + F+GH V V++S
Sbjct: 353 KKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTV-FRGHVGPVYQVSWS 411
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
+ + + S S+D T++IW H+ V +V +S DG K+++ D+V+KLW
Sbjct: 412 ADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 66.9 bits (156), Expect = 6e-11
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 7/177 (3%)
Query: 142 SFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSG 201
+ GH V C S DG +AS S D + +LW+L + + T K K L +AW P G
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDG 163
Query: 202 CYVAVATSHGNVKLYDIRTHNLV-QYYSIHNEAVTQVA---IHPSG--SYILTASKDGKM 255
++ + G + ++ + L + H + +T ++ +H S +T+SKDG
Sbjct: 164 KHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDA 223
Query: 256 KILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESK 312
+I D+ I LSGH V V + G ++ + D + +W+T L E K
Sbjct: 224 RIWDITLKKSIICLSGHTLAVTCVKWGGDGIIYTGS-QDCTIKMWETTQGKLIRELK 279
Score = 66.1 bits (154), Expect = 1e-10
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 56 SYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSS 115
S GH EAV+ V+FS GK +AS S D TVR+W K H V +V +S
Sbjct: 102 SQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSP 161
Query: 116 DGSKIITASDDKVVKLWSTHKHKFISS-FVGHTNWV-----RCARMSNDGSIIASCSDDK 169
DG +++ S + W+ K + S GH W+ +S+ + S D
Sbjct: 162 DGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDG 221
Query: 170 STKLWNLDSGECIHTYKDLKGHGLHLA---WHPSGCYVAVATSHGNVKLYDIRTHNLVQY 226
++W++ + I L GH L + W G + + +K+++ L++
Sbjct: 222 DARIWDITLKKSIIC---LSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRE 277
Query: 227 YSIHNEAVTQVAIHPSGSYIL 247
H + +A+ S Y+L
Sbjct: 278 LKGHGHWINSLAL--STEYVL 296
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 98.3 bits (234), Expect = 2e-20
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 2/218 (0%)
Query: 101 FKAHSQTVRSVQFSSDGSKI-ITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDG 159
F AHS V ++ S++ +T +D V LW+ K I S GH++ +
Sbjct: 12 FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASE 71
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIR 219
++A+ + + KLW+L+ + + T + + + + +HP G + A + N+K++DIR
Sbjct: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
Query: 220 THNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV 279
+ Y H V + P G ++++ +D +K+ DL G + H G + ++
Sbjct: 132 KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSL 191
Query: 280 NFSPTGDTFSSAGDDKLVFIWK-TNFTDLSSESKENEG 316
+F P ++ D+ V W F + S E G
Sbjct: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAG 229
Score = 96.3 bits (229), Expect = 9e-20
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 1/243 (0%)
Query: 6 VTTPEPCLKKQLKGHKNAITALYYNPNDQQI-ATSSLDNSVLLWDLRGTMRSYRFQGHDE 64
+TT ++ H A+ L ++ T D+ V LW + GH
Sbjct: 1 MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60
Query: 65 AVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS 124
+ VTF +S +A+ + T+++W H SV F G + S
Sbjct: 61 GIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
Query: 125 DDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHT 184
D +K+W K I ++ GHT V R + DG + S +D K+W+L +G+ +
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180
Query: 185 YKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGS 244
+K +G L +HP +A ++ VK +D+ T L+ V ++ +P G
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGK 240
Query: 245 YIL 247
+L
Sbjct: 241 TVL 243
Score = 86.6 bits (205), Expect = 7e-17
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 10 EPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDV 69
E + + L GH++ ++ ++P + A+ SLD ++ +WD+R + ++GH V +
Sbjct: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 149
Query: 70 TFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVV 129
F+ G+++ S D V++W T FK+H ++S+ F + T S D+ V
Sbjct: 150 RFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTV 209
Query: 130 KLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGEC 181
K W + I S T VRC + DG + C +S K+++ + C
Sbjct: 210 KFWDLETFELIGSGGPETAGVRCLSFNPDGKTVL-CGLQESLKIFSWEPIRC 260
Score = 86.2 bits (204), Expect = 9e-17
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 7/182 (3%)
Query: 140 ISSFVGHTNWVRCARMSNDGS-IIASCSDDKSTKLWNLDSGECIHTYKDLKGH--GLH-L 195
+ FV H+ V C ++ S ++ + +D LW + I + L GH G+ +
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS---LYGHSSGIDSV 65
Query: 196 AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKM 255
+ S VA + G +KL+D+ +V+ + H V HP G + + S D +
Sbjct: 66 TFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
Query: 256 KILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENE 315
KI D+ + I T GH VN + F+P G S G+D +V +W L +E K +E
Sbjct: 126 KIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185
Query: 316 GQ 317
GQ
Sbjct: 186 GQ 187
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 98.3 bits (234), Expect = 2e-20
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 2/218 (0%)
Query: 101 FKAHSQTVRSVQFSSDGSKI-ITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDG 159
F AHS V ++ S++ +T +D V LW+ K I S GH++ +
Sbjct: 12 FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASE 71
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIR 219
++A+ + + KLW+L+ + + T + + + + +HP G + A + N+K++DIR
Sbjct: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR 131
Query: 220 THNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV 279
+ Y H V + P G ++++ +D +K+ DL G + H G + ++
Sbjct: 132 KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSL 191
Query: 280 NFSPTGDTFSSAGDDKLVFIWK-TNFTDLSSESKENEG 316
+F P ++ D+ V W F + S E G
Sbjct: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAG 229
Score = 96.3 bits (229), Expect = 9e-20
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 1/243 (0%)
Query: 6 VTTPEPCLKKQLKGHKNAITALYYNPNDQQI-ATSSLDNSVLLWDLRGTMRSYRFQGHDE 64
+TT ++ H A+ L ++ T D+ V LW + GH
Sbjct: 1 MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60
Query: 65 AVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS 124
+ VTF +S +A+ + T+++W H SV F G + S
Sbjct: 61 GIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS 120
Query: 125 DDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHT 184
D +K+W K I ++ GHT V R + DG + S +D K+W+L +G+ +
Sbjct: 121 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE 180
Query: 185 YKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGS 244
+K +G L +HP +A ++ VK +D+ T L+ V ++ +P G
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGK 240
Query: 245 YIL 247
+L
Sbjct: 241 TVL 243
Score = 86.6 bits (205), Expect = 7e-17
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 10 EPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDV 69
E + + L GH++ ++ ++P + A+ SLD ++ +WD+R + ++GH V +
Sbjct: 90 EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 149
Query: 70 TFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVV 129
F+ G+++ S D V++W T FK+H ++S+ F + T S D+ V
Sbjct: 150 RFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTV 209
Query: 130 KLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGEC 181
K W + I S T VRC + DG + C +S K+++ + C
Sbjct: 210 KFWDLETFELIGSGGPETAGVRCLSFNPDGKTVL-CGLQESLKIFSWEPIRC 260
Score = 86.2 bits (204), Expect = 9e-17
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 7/182 (3%)
Query: 140 ISSFVGHTNWVRCARMSNDGS-IIASCSDDKSTKLWNLDSGECIHTYKDLKGH--GLH-L 195
+ FV H+ V C ++ S ++ + +D LW + I + L GH G+ +
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILS---LYGHSSGIDSV 65
Query: 196 AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKM 255
+ S VA + G +KL+D+ +V+ + H V HP G + + S D +
Sbjct: 66 TFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNL 125
Query: 256 KILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENE 315
KI D+ + I T GH VN + F+P G S G+D +V +W L +E K +E
Sbjct: 126 KIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185
Query: 316 GQ 317
GQ
Sbjct: 186 GQ 187
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 97.9 bits (233), Expect = 3e-20
Identities = 76/310 (24%), Positives = 128/310 (41%), Gaps = 25/310 (8%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
L ++ +I + + P+ +++ T S LW+ + Q HD+ + + +S +
Sbjct: 119 LNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNEN 178
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
YM S T++ W + AH +++R + F K + SDD VK+W K
Sbjct: 179 YMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTK 238
Query: 137 HKFISSFVGHT------------------NW-VRCARMSNDGSIIASCSDDKSTKLWNLD 177
SS G+ W V+ S++ S D+ KLW+
Sbjct: 239 CVDESSLTGYIGKGVIEIRFGVMPCNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTR 298
Query: 178 SGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQV 237
SG + + K L + W+ +G ++ A+ +KLYDIRT +Q + H + VT +
Sbjct: 299 SGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSL 358
Query: 238 AIHP-SGSYILTASKDGKMKILDLLEGH---PIFTLSGHNGPVNAVNFSPTGDTFSSAGD 293
A HP Y ++ S DG I + GH I + H+ V + + P G S +
Sbjct: 359 AWHPCHEEYFVSGSSDG--SICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSN 416
Query: 294 DKLVFIWKTN 303
D W N
Sbjct: 417 DHTTKFWCRN 426
Score = 52.4 bits (120), Expect = 1e-06
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTF-SSSG 75
L GHKN + ++ +N N + T+S D + L+D+R F+GH + V + +
Sbjct: 306 LHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHE 365
Query: 76 KYMASASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
+Y S S D ++ W V + AH +V + + G + + S+D K W
Sbjct: 366 EYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFWCR 425
Query: 135 HK 136
++
Sbjct: 426 NR 427
Score = 39.5 bits (88), Expect = 0.010
Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
Query: 197 WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMK 256
W PSG + + G L++ ++ N H++ + + + +Y+++ G +K
Sbjct: 131 WTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLK 190
Query: 257 ILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSES 311
+ + H + ++F T F S DD V +W +FT ES
Sbjct: 191 YWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVW--DFTKCVDES 243
>At5g19950.3 68418.m02375 expressed protein
Length = 441
Score = 96.7 bits (230), Expect = 7e-20
Identities = 56/156 (35%), Positives = 91/156 (58%), Gaps = 5/156 (3%)
Query: 343 VNILSKKALDYDLRDISEGSLPEDF-VKDPSKLESPVVVQIQKIRNVSAPKANE--ESTS 399
V + + L+ D++ I SLP+ ++ S L+ P V+QI +R+V+ A E S++
Sbjct: 55 VESVEAELLNMDIKLIGGKSLPDPTELRRCSHLQGPKVLQISYVRDVTRSSAEEFVGSST 114
Query: 400 APRMLKLTLHDGKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISV 459
R+LK L DGK + LE SHIP+++ + PGTK+ L+N+ + + G+V LTP ++V
Sbjct: 115 GKRVLKFALTDGKTEISALEYSHIPTINNDVTPGTKVRLENKAV-IRDGLVCLTPKEVTV 173
Query: 460 LGGTVSHMIEKWELNRSLAKHTRGGIGAEG-GPPPW 494
LGG V + E+W++ + A R G GPPP+
Sbjct: 174 LGGYVQSLTEEWQMKKKYASLARSQESKAGDGPPPF 209
>At5g19950.2 68418.m02374 expressed protein
Length = 443
Score = 96.7 bits (230), Expect = 7e-20
Identities = 56/156 (35%), Positives = 91/156 (58%), Gaps = 5/156 (3%)
Query: 343 VNILSKKALDYDLRDISEGSLPEDF-VKDPSKLESPVVVQIQKIRNVSAPKANE--ESTS 399
V + + L+ D++ I SLP+ ++ S L+ P V+QI +R+V+ A E S++
Sbjct: 55 VESVEAELLNMDIKLIGGKSLPDPTELRRCSHLQGPKVLQISYVRDVTRSSAEEFVGSST 114
Query: 400 APRMLKLTLHDGKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISV 459
R+LK L DGK + LE SHIP+++ + PGTK+ L+N+ + + G+V LTP ++V
Sbjct: 115 GKRVLKFALTDGKTEISALEYSHIPTINNDVTPGTKVRLENKAV-IRDGLVCLTPKEVTV 173
Query: 460 LGGTVSHMIEKWELNRSLAKHTRGGIGAEG-GPPPW 494
LGG V + E+W++ + A R G GPPP+
Sbjct: 174 LGGYVQSLTEEWQMKKKYASLARSQESKAGDGPPPF 209
>At5g19950.1 68418.m02373 expressed protein
Length = 443
Score = 96.7 bits (230), Expect = 7e-20
Identities = 56/156 (35%), Positives = 91/156 (58%), Gaps = 5/156 (3%)
Query: 343 VNILSKKALDYDLRDISEGSLPEDF-VKDPSKLESPVVVQIQKIRNVSAPKANE--ESTS 399
V + + L+ D++ I SLP+ ++ S L+ P V+QI +R+V+ A E S++
Sbjct: 55 VESVEAELLNMDIKLIGGKSLPDPTELRRCSHLQGPKVLQISYVRDVTRSSAEEFVGSST 114
Query: 400 APRMLKLTLHDGKVTCTGLEISHIPSLSINTPPGTKLLLKNEELEVCHGVVWLTPSVISV 459
R+LK L DGK + LE SHIP+++ + PGTK+ L+N+ + + G+V LTP ++V
Sbjct: 115 GKRVLKFALTDGKTEISALEYSHIPTINNDVTPGTKVRLENKAV-IRDGLVCLTPKEVTV 173
Query: 460 LGGTVSHMIEKWELNRSLAKHTRGGIGAEG-GPPPW 494
LGG V + E+W++ + A R G GPPP+
Sbjct: 174 LGGYVQSLTEEWQMKKKYASLARSQESKAGDGPPPF 209
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 96.3 bits (229), Expect = 9e-20
Identities = 49/185 (26%), Positives = 88/185 (47%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
L GH + + ++ +N + + + + LWDL + F GH V F G+
Sbjct: 3 LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE 62
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
++AS S D +R+W G +K H++ + +++FS DG +++ D VVK+W
Sbjct: 63 FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA 122
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLA 196
K + F H +R ++A+ S D++ K W+L++ E I T + +A
Sbjct: 123 GKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIA 182
Query: 197 WHPSG 201
+HP G
Sbjct: 183 FHPDG 187
Score = 92.3 bits (219), Expect = 1e-18
Identities = 49/193 (25%), Positives = 84/193 (43%)
Query: 61 GHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKI 120
GH V V F+S + + + +++W + F H +V+F G +
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFL 64
Query: 121 ITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGE 180
+ S D +++W T K I ++ GHT + S DG + S D K+W+L +G+
Sbjct: 65 ASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGK 124
Query: 181 CIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIH 240
+H +K +G L +HP +A ++ VK +D+ T L+ V +A H
Sbjct: 125 LLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFH 184
Query: 241 PSGSYILTASKDG 253
P G + DG
Sbjct: 185 PDGQTLFCGLDDG 197
Score = 89.4 bits (212), Expect = 1e-17
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 1/199 (0%)
Query: 104 HSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIA 163
H+ V SV F+S+ ++ + V+KLW + K + +F GH + G +A
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLA 65
Query: 164 SCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNL 223
S S D + ++W+ CI TYK + + P G +V VK++D+ L
Sbjct: 66 SGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKL 125
Query: 224 VQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSP 283
+ + H + + HP + T S D +K DL I T V A+ F P
Sbjct: 126 LHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHP 185
Query: 284 TGDTFSSAGDDKL-VFIWK 301
G T DD L V+ W+
Sbjct: 186 DGQTLFCGLDDGLKVYSWE 204
Score = 81.0 bits (191), Expect = 3e-15
Identities = 35/159 (22%), Positives = 77/159 (48%)
Query: 142 SFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSG 201
S GHT+ V +++ ++ + + KLW+L+ + + + + + + +HP G
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 202 CYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLL 261
++A +S N++++D R +Q Y H ++ + P G ++++ D +K+ DL
Sbjct: 62 EFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLT 121
Query: 262 EGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
G + H GP+ +++F P ++ D+ V W
Sbjct: 122 AGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFW 160
Score = 77.4 bits (182), Expect = 4e-14
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 1/172 (0%)
Query: 10 EPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDV 69
E + + GH++ +A+ ++P + +A+ S D ++ +WD R ++GH + +
Sbjct: 38 ESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTI 97
Query: 70 TFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVV 129
FS G+++ S D V++W T FK H +RS+ F + T S D+ V
Sbjct: 98 EFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTV 157
Query: 130 KLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGEC 181
K W + I + VR DG + C D K+++ + C
Sbjct: 158 KFWDLETFELIGTTRPEATGVRAIAFHPDGQTL-FCGLDDGLKVYSWEPVIC 208
Score = 65.7 bits (153), Expect = 1e-10
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 195 LAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGK 254
+A++ V S G +KL+D+ +V+ ++ H + V HP G ++ + S D
Sbjct: 13 VAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTN 72
Query: 255 MKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKEN 314
+++ D + I T GH ++ + FSP G S G D +V +W L E K +
Sbjct: 73 LRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCH 132
Query: 315 EG 316
EG
Sbjct: 133 EG 134
Score = 44.4 bits (100), Expect = 4e-04
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 230 HNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFS 289
H V VA + +L + G +K+ DL E + +GH +AV F P G+ +
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLA 65
Query: 290 SAGDDKLVFIWKT 302
S D + +W T
Sbjct: 66 SGSSDTNLRVWDT 78
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 95.9 bits (228), Expect = 1e-19
Identities = 73/335 (21%), Positives = 145/335 (43%), Gaps = 15/335 (4%)
Query: 4 DKVTTPEPCLKKQLKGHKNAITALYYNPNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGH 62
+ V E L K+L G+ I + + +++Q +A ++ V ++D+ SY GH
Sbjct: 341 ENVEETELVLSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGH 400
Query: 63 DEAVM--DVTFSSSGKYM-ASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG-S 118
E V+ D SSSG + + S+DKTVR+W T G+ H+ + +V F+ S
Sbjct: 401 KEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFS 460
Query: 119 KIITASDDKVVKLWSTH----------KHKFISSFVGHTNWVRCARMSNDGSIIASCSDD 168
++ S D+ +K+WS K S H + ++ + S++ + S+D
Sbjct: 461 FFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSED 520
Query: 169 KSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYS 228
++ +W L + T K K + + V A+ VK++ I + ++ +
Sbjct: 521 RTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFE 580
Query: 229 IHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTF 288
H +V + + G+ ++ DG +K+ ++ I T H V A+ +
Sbjct: 581 GHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMI 640
Query: 289 SSAGDDKLVFIWKTNFTDLSSESKENEGQNMITGQ 323
++ G D ++ +W + + E + ++ GQ
Sbjct: 641 ATGGGDAVINLWHDSTASDKEDDFRKEEEAILRGQ 675
Score = 88.6 bits (210), Expect = 2e-17
Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 6 VTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDE 64
V + + +K ++G + +TAL +P+D+ + ++ + +WDL T++ R ++GH+
Sbjct: 45 VDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLE-TLKCIRSWKGHEG 103
Query: 65 AVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK--IIT 122
VM + +SG +A+A D+ V +W T F+ H V S+ F D +K +I+
Sbjct: 104 PVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILIS 163
Query: 123 ASDDKVVKLWSTH----KHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDS 178
SDD V++W + + K ++ H + V +S DG + S DK LW+L
Sbjct: 164 GSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHD 223
Query: 179 GEC---IHTYKDLKGHGLHLAWHPSGCYVA 205
C + TY+ L+ + P +VA
Sbjct: 224 YSCKATVATYEVLEAVTTVSSGTPFASFVA 253
Score = 79.4 bits (187), Expect = 1e-14
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 7/193 (3%)
Query: 114 SSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKL 173
SSDGS I A D V+ + + S+ G ++ + +S D ++ S + ++
Sbjct: 28 SSDGSFIACACGD-VINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRV 86
Query: 174 WNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEA 233
W+L++ +CI ++K +G + +A H SG +A A + V ++D+ Y+ H
Sbjct: 87 WDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGV 146
Query: 234 VTQVAIHPSG--SYILTASKDGKMKILDL----LEGHPIFTLSGHNGPVNAVNFSPTGDT 287
V+ + HP + +++ S D +++ DL E + + H V ++ S G T
Sbjct: 147 VSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLT 206
Query: 288 FSSAGDDKLVFIW 300
SAG DK+V +W
Sbjct: 207 LFSAGRDKVVNLW 219
Score = 29.9 bits (64), Expect = 8.5
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 239 IHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVF 298
+ GS+I A D + I+D + T+ G + + A+ SP SAG + +
Sbjct: 27 VSSDGSFIACACGD-VINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIR 85
Query: 299 IWKTNFTDLSSESKENEGQNM 319
+W K +EG M
Sbjct: 86 VWDLETLKCIRSWKGHEGPVM 106
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 94.3 bits (224), Expect = 3e-19
Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 11/242 (4%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTF-SSSGKY 77
H + IT + + PN Q+ATSS D ++ +WD R GH VM + F +
Sbjct: 549 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 608
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS-THK 136
+ S + +R W + + A +Q V+F + + A+ + V ++ +
Sbjct: 609 LCSCDSNNDIRFWDINASCVRAVKGASTQ----VRFQPRTGQFLAAASENTVSIFDIENN 664
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH-L 195
+K ++ F GH++ V S +G ++AS S+D + KLW+L SG+CIH + G+ H +
Sbjct: 665 NKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSN-SGNKFHSV 722
Query: 196 AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKM 255
+HPS + V + ++L++ N + H ++ +A PS + +AS D +
Sbjct: 723 VFHPSYPDLLVIGGYQAIELWN-TMENKCMTVAGHECVISALAQSPSTGVVASASHDKSV 781
Query: 256 KI 257
KI
Sbjct: 782 KI 783
Score = 87.8 bits (208), Expect = 3e-17
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 8/240 (3%)
Query: 66 VMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASD 125
V+ +FS GK +ASA DK V IW + H+ + V+F + +++ T+S
Sbjct: 511 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSF 570
Query: 126 DKVVKLW-STHKHKFISSFVGHTNWVRCARM-SNDGSIIASCSDDKSTKLWNLDSGECIH 183
DK +K+W ++ F+ + GH V ++ SC + + W++++ C+
Sbjct: 571 DKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCV- 628
Query: 184 TYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHN-LVQYYSIHNEAVTQVAIHPS 242
+ +KG + + P A S V ++DI +N V + H+ V V P+
Sbjct: 629 --RAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPN 686
Query: 243 GSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKT 302
G + + S+D +K+ L G I LS ++V F P+ G + + +W T
Sbjct: 687 GELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNT 745
Score = 80.6 bits (190), Expect = 5e-15
Identities = 59/269 (21%), Positives = 126/269 (46%), Gaps = 9/269 (3%)
Query: 36 IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVT 95
+A++ D V +W++ + H + DV F + +A++S DKT++IW +
Sbjct: 523 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDP 582
Query: 96 G-STGMFKAHSQTVRSVQFSSDGSKIITASD-DKVVKLWSTHKHKFISSFVGHTNWVRCA 153
G H+ V S+ F ++++ + D + ++ W + + + G + VR
Sbjct: 583 GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQVRF- 640
Query: 154 RMSNDGSIIASCSDDKSTKLWNLD-SGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGN 212
G +A+ S++ + +++++ + + ++ +K + + W P+G VA + S
Sbjct: 641 -QPRTGQFLAAASEN-TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVA-SVSEDA 697
Query: 213 VKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGH 272
VKL+ + + + + S V HPS +L +++ + +E + T++GH
Sbjct: 698 VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTME-NKCMTVAGH 756
Query: 273 NGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
++A+ SP+ +SA DK V IWK
Sbjct: 757 ECVISALAQSPSTGVVASASHDKSVKIWK 785
Score = 64.1 bits (149), Expect = 4e-10
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 8/201 (3%)
Query: 113 FSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTK 172
FS DG + +A DK V +W+ + S+ H + + R + + +A+ S DK+ K
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 575
Query: 173 LWNL-DSGECIHTYKDLKGHGLHLAWHPSGC-YVAVATSHGNVKLYDIRTHNLVQYYSIH 230
+W+ D G + T + + +HP + S+ +++ +DI + V+
Sbjct: 576 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAV--- 631
Query: 231 NEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHP-IFTLSGHNGPVNAVNFSPTGDTFS 289
A TQV P L A+ + + I D+ + + GH+ V++V +SP G+ +
Sbjct: 632 KGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVA 691
Query: 290 SAGDDKLVFIWKTNFTDLSSE 310
S +D V +W + D E
Sbjct: 692 SVSED-AVKLWSLSSGDCIHE 711
Score = 40.7 bits (91), Expect = 0.005
Identities = 40/209 (19%), Positives = 81/209 (38%), Gaps = 8/209 (3%)
Query: 96 GSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKF--ISSFVGHTNWVRCA 153
G G + + ++ S GS T + V ++ F +S + V C
Sbjct: 455 GDVGALEDNVESFLSQDDGDGGSLFGTLKRNSSVHTETSKPFSFNEVSCIRKSASKVICC 514
Query: 154 RMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNV 213
S DG ++AS DK +WN+++ + T ++ + + P+ +A ++ +
Sbjct: 515 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 574
Query: 214 KLYDIRTHN-LVQYYSIHNEAVTQVAIHPSGSYIL-TASKDGKMKILDLLEGHPIFTLSG 271
K++D ++ S H V + HP + +L + + ++ D+ +
Sbjct: 575 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINAS----CVRA 630
Query: 272 HNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
G V F P F +A + V I+
Sbjct: 631 VKGASTQVRFQPRTGQFLAAASENTVSIF 659
Score = 39.5 bits (88), Expect = 0.010
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKY 77
KGH + + ++ ++PN + +A+ S +++V LW L + V F S
Sbjct: 672 KGHSSNVHSVCWSPNGELVASVS-EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPD 730
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
+ + + +W T+ H + ++ S + +AS DK VK+W
Sbjct: 731 LLVIGGYQAIELW-NTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 784
Score = 33.9 bits (74), Expect = 0.52
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 280 NFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEGQNMITGQR 324
+FS G +SAG DK VFIW N L ES E ++IT R
Sbjct: 515 SFSYDGKLLASAGHDKKVFIW--NMETLQVESTPEEHAHIITDVR 557
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 94.3 bits (224), Expect = 3e-19
Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 11/242 (4%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTF-SSSGKY 77
H + IT + + PN Q+ATSS D ++ +WD R GH VM + F +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS-THK 136
+ S + +R W + + A +Q V+F + + A+ + V ++ +
Sbjct: 611 LCSCDSNNDIRFWDINASCVRAVKGASTQ----VRFQPRTGQFLAAASENTVSIFDIENN 666
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH-L 195
+K ++ F GH++ V S +G ++AS S+D + KLW+L SG+CIH + G+ H +
Sbjct: 667 NKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSN-SGNKFHSV 724
Query: 196 AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKM 255
+HPS + V + ++L++ N + H ++ +A PS + +AS D +
Sbjct: 725 VFHPSYPDLLVIGGYQAIELWN-TMENKCMTVAGHECVISALAQSPSTGVVASASHDKSV 783
Query: 256 KI 257
KI
Sbjct: 784 KI 785
Score = 87.8 bits (208), Expect = 3e-17
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 8/240 (3%)
Query: 66 VMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASD 125
V+ +FS GK +ASA DK V IW + H+ + V+F + +++ T+S
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSF 572
Query: 126 DKVVKLW-STHKHKFISSFVGHTNWVRCARM-SNDGSIIASCSDDKSTKLWNLDSGECIH 183
DK +K+W ++ F+ + GH V ++ SC + + W++++ C+
Sbjct: 573 DKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCV- 630
Query: 184 TYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHN-LVQYYSIHNEAVTQVAIHPS 242
+ +KG + + P A S V ++DI +N V + H+ V V P+
Sbjct: 631 --RAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPN 688
Query: 243 GSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKT 302
G + + S+D +K+ L G I LS ++V F P+ G + + +W T
Sbjct: 689 GELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNT 747
Score = 80.6 bits (190), Expect = 5e-15
Identities = 59/269 (21%), Positives = 126/269 (46%), Gaps = 9/269 (3%)
Query: 36 IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVT 95
+A++ D V +W++ + H + DV F + +A++S DKT++IW +
Sbjct: 525 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDP 584
Query: 96 G-STGMFKAHSQTVRSVQFSSDGSKIITASD-DKVVKLWSTHKHKFISSFVGHTNWVRCA 153
G H+ V S+ F ++++ + D + ++ W + + + G + VR
Sbjct: 585 GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQVRF- 642
Query: 154 RMSNDGSIIASCSDDKSTKLWNLD-SGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGN 212
G +A+ S++ + +++++ + + ++ +K + + W P+G VA + S
Sbjct: 643 -QPRTGQFLAAASEN-TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVA-SVSEDA 699
Query: 213 VKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGH 272
VKL+ + + + + S V HPS +L +++ + +E + T++GH
Sbjct: 700 VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTME-NKCMTVAGH 758
Query: 273 NGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
++A+ SP+ +SA DK V IWK
Sbjct: 759 ECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 64.1 bits (149), Expect = 4e-10
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 8/201 (3%)
Query: 113 FSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTK 172
FS DG + +A DK V +W+ + S+ H + + R + + +A+ S DK+ K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 173 LWNL-DSGECIHTYKDLKGHGLHLAWHPSGC-YVAVATSHGNVKLYDIRTHNLVQYYSIH 230
+W+ D G + T + + +HP + S+ +++ +DI + V+
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAV--- 633
Query: 231 NEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHP-IFTLSGHNGPVNAVNFSPTGDTFS 289
A TQV P L A+ + + I D+ + + GH+ V++V +SP G+ +
Sbjct: 634 KGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVA 693
Query: 290 SAGDDKLVFIWKTNFTDLSSE 310
S +D V +W + D E
Sbjct: 694 SVSED-AVKLWSLSSGDCIHE 713
Score = 40.7 bits (91), Expect = 0.005
Identities = 40/209 (19%), Positives = 81/209 (38%), Gaps = 8/209 (3%)
Query: 96 GSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKF--ISSFVGHTNWVRCA 153
G G + + ++ S GS T + V ++ F +S + V C
Sbjct: 457 GDVGALEDNVESFLSQDDGDGGSLFGTLKRNSSVHTETSKPFSFNEVSCIRKSASKVICC 516
Query: 154 RMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNV 213
S DG ++AS DK +WN+++ + T ++ + + P+ +A ++ +
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 214 KLYDIRTHN-LVQYYSIHNEAVTQVAIHPSGSYIL-TASKDGKMKILDLLEGHPIFTLSG 271
K++D ++ S H V + HP + +L + + ++ D+ +
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINAS----CVRA 632
Query: 272 HNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
G V F P F +A + V I+
Sbjct: 633 VKGASTQVRFQPRTGQFLAAASENTVSIF 661
Score = 39.5 bits (88), Expect = 0.010
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKY 77
KGH + + ++ ++PN + +A+ S +++V LW L + V F S
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVS-EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPD 732
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
+ + + +W T+ H + ++ S + +AS DK VK+W
Sbjct: 733 LLVIGGYQAIELW-NTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 33.9 bits (74), Expect = 0.52
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 280 NFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEGQNMITGQR 324
+FS G +SAG DK VFIW N L ES E ++IT R
Sbjct: 517 SFSYDGKLLASAGHDKKVFIW--NMETLQVESTPEEHAHIITDVR 559
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 94.3 bits (224), Expect = 3e-19
Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 11/242 (4%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTF-SSSGKY 77
H + IT + + PN Q+ATSS D ++ +WD R GH VM + F +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS-THK 136
+ S + +R W + + A +Q V+F + + A+ + V ++ +
Sbjct: 611 LCSCDSNNDIRFWDINASCVRAVKGASTQ----VRFQPRTGQFLAAASENTVSIFDIENN 666
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH-L 195
+K ++ F GH++ V S +G ++AS S+D + KLW+L SG+CIH + G+ H +
Sbjct: 667 NKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSN-SGNKFHSV 724
Query: 196 AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKM 255
+HPS + V + ++L++ N + H ++ +A PS + +AS D +
Sbjct: 725 VFHPSYPDLLVIGGYQAIELWN-TMENKCMTVAGHECVISALAQSPSTGVVASASHDKSV 783
Query: 256 KI 257
KI
Sbjct: 784 KI 785
Score = 87.8 bits (208), Expect = 3e-17
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 8/240 (3%)
Query: 66 VMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASD 125
V+ +FS GK +ASA DK V IW + H+ + V+F + +++ T+S
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSF 572
Query: 126 DKVVKLW-STHKHKFISSFVGHTNWVRCARM-SNDGSIIASCSDDKSTKLWNLDSGECIH 183
DK +K+W ++ F+ + GH V ++ SC + + W++++ C+
Sbjct: 573 DKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCV- 630
Query: 184 TYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHN-LVQYYSIHNEAVTQVAIHPS 242
+ +KG + + P A S V ++DI +N V + H+ V V P+
Sbjct: 631 --RAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPN 688
Query: 243 GSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKT 302
G + + S+D +K+ L G I LS ++V F P+ G + + +W T
Sbjct: 689 GELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNT 747
Score = 80.6 bits (190), Expect = 5e-15
Identities = 59/269 (21%), Positives = 126/269 (46%), Gaps = 9/269 (3%)
Query: 36 IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVT 95
+A++ D V +W++ + H + DV F + +A++S DKT++IW +
Sbjct: 525 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDP 584
Query: 96 G-STGMFKAHSQTVRSVQFSSDGSKIITASD-DKVVKLWSTHKHKFISSFVGHTNWVRCA 153
G H+ V S+ F ++++ + D + ++ W + + + G + VR
Sbjct: 585 GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQVRF- 642
Query: 154 RMSNDGSIIASCSDDKSTKLWNLD-SGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGN 212
G +A+ S++ + +++++ + + ++ +K + + W P+G VA + S
Sbjct: 643 -QPRTGQFLAAASEN-TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVA-SVSEDA 699
Query: 213 VKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGH 272
VKL+ + + + + S V HPS +L +++ + +E + T++GH
Sbjct: 700 VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTME-NKCMTVAGH 758
Query: 273 NGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
++A+ SP+ +SA DK V IWK
Sbjct: 759 ECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 64.1 bits (149), Expect = 4e-10
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 8/201 (3%)
Query: 113 FSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTK 172
FS DG + +A DK V +W+ + S+ H + + R + + +A+ S DK+ K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 173 LWNL-DSGECIHTYKDLKGHGLHLAWHPSGC-YVAVATSHGNVKLYDIRTHNLVQYYSIH 230
+W+ D G + T + + +HP + S+ +++ +DI + V+
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAV--- 633
Query: 231 NEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHP-IFTLSGHNGPVNAVNFSPTGDTFS 289
A TQV P L A+ + + I D+ + + GH+ V++V +SP G+ +
Sbjct: 634 KGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVA 693
Query: 290 SAGDDKLVFIWKTNFTDLSSE 310
S +D V +W + D E
Sbjct: 694 SVSED-AVKLWSLSSGDCIHE 713
Score = 40.7 bits (91), Expect = 0.005
Identities = 40/209 (19%), Positives = 81/209 (38%), Gaps = 8/209 (3%)
Query: 96 GSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKF--ISSFVGHTNWVRCA 153
G G + + ++ S GS T + V ++ F +S + V C
Sbjct: 457 GDVGALEDNVESFLSQDDGDGGSLFGTLKRNSSVHTETSKPFSFNEVSCIRKSASKVICC 516
Query: 154 RMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNV 213
S DG ++AS DK +WN+++ + T ++ + + P+ +A ++ +
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 214 KLYDIRTHN-LVQYYSIHNEAVTQVAIHPSGSYIL-TASKDGKMKILDLLEGHPIFTLSG 271
K++D ++ S H V + HP + +L + + ++ D+ +
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINAS----CVRA 632
Query: 272 HNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
G V F P F +A + V I+
Sbjct: 633 VKGASTQVRFQPRTGQFLAAASENTVSIF 661
Score = 39.5 bits (88), Expect = 0.010
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKY 77
KGH + + ++ ++PN + +A+ S +++V LW L + V F S
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVS-EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPD 732
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
+ + + +W T+ H + ++ S + +AS DK VK+W
Sbjct: 733 LLVIGGYQAIELW-NTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 33.9 bits (74), Expect = 0.52
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 280 NFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEGQNMITGQR 324
+FS G +SAG DK VFIW N L ES E ++IT R
Sbjct: 517 SFSYDGKLLASAGHDKKVFIW--NMETLQVESTPEEHAHIITDVR 559
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 94.3 bits (224), Expect = 3e-19
Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 11/242 (4%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTF-SSSGKY 77
H + IT + + PN Q+ATSS D ++ +WD R GH VM + F +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS-THK 136
+ S + +R W + + A +Q V+F + + A+ + V ++ +
Sbjct: 611 LCSCDSNNDIRFWDINASCVRAVKGASTQ----VRFQPRTGQFLAAASENTVSIFDIENN 666
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH-L 195
+K ++ F GH++ V S +G ++AS S+D + KLW+L SG+CIH + G+ H +
Sbjct: 667 NKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSN-SGNKFHSV 724
Query: 196 AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKM 255
+HPS + V + ++L++ N + H ++ +A PS + +AS D +
Sbjct: 725 VFHPSYPDLLVIGGYQAIELWN-TMENKCMTVAGHECVISALAQSPSTGVVASASHDKSV 783
Query: 256 KI 257
KI
Sbjct: 784 KI 785
Score = 87.8 bits (208), Expect = 3e-17
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 8/240 (3%)
Query: 66 VMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASD 125
V+ +FS GK +ASA DK V IW + H+ + V+F + +++ T+S
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSF 572
Query: 126 DKVVKLW-STHKHKFISSFVGHTNWVRCARM-SNDGSIIASCSDDKSTKLWNLDSGECIH 183
DK +K+W ++ F+ + GH V ++ SC + + W++++ C+
Sbjct: 573 DKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCV- 630
Query: 184 TYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHN-LVQYYSIHNEAVTQVAIHPS 242
+ +KG + + P A S V ++DI +N V + H+ V V P+
Sbjct: 631 --RAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPN 688
Query: 243 GSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKT 302
G + + S+D +K+ L G I LS ++V F P+ G + + +W T
Sbjct: 689 GELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNT 747
Score = 80.6 bits (190), Expect = 5e-15
Identities = 59/269 (21%), Positives = 126/269 (46%), Gaps = 9/269 (3%)
Query: 36 IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVT 95
+A++ D V +W++ + H + DV F + +A++S DKT++IW +
Sbjct: 525 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDP 584
Query: 96 G-STGMFKAHSQTVRSVQFSSDGSKIITASD-DKVVKLWSTHKHKFISSFVGHTNWVRCA 153
G H+ V S+ F ++++ + D + ++ W + + + G + VR
Sbjct: 585 GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQVRF- 642
Query: 154 RMSNDGSIIASCSDDKSTKLWNLD-SGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGN 212
G +A+ S++ + +++++ + + ++ +K + + W P+G VA + S
Sbjct: 643 -QPRTGQFLAAASEN-TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVA-SVSEDA 699
Query: 213 VKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGH 272
VKL+ + + + + S V HPS +L +++ + +E + T++GH
Sbjct: 700 VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTME-NKCMTVAGH 758
Query: 273 NGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
++A+ SP+ +SA DK V IWK
Sbjct: 759 ECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 64.1 bits (149), Expect = 4e-10
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 8/201 (3%)
Query: 113 FSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTK 172
FS DG + +A DK V +W+ + S+ H + + R + + +A+ S DK+ K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 173 LWNL-DSGECIHTYKDLKGHGLHLAWHPSGC-YVAVATSHGNVKLYDIRTHNLVQYYSIH 230
+W+ D G + T + + +HP + S+ +++ +DI + V+
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAV--- 633
Query: 231 NEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHP-IFTLSGHNGPVNAVNFSPTGDTFS 289
A TQV P L A+ + + I D+ + + GH+ V++V +SP G+ +
Sbjct: 634 KGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVA 693
Query: 290 SAGDDKLVFIWKTNFTDLSSE 310
S +D V +W + D E
Sbjct: 694 SVSED-AVKLWSLSSGDCIHE 713
Score = 40.7 bits (91), Expect = 0.005
Identities = 40/209 (19%), Positives = 81/209 (38%), Gaps = 8/209 (3%)
Query: 96 GSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKF--ISSFVGHTNWVRCA 153
G G + + ++ S GS T + V ++ F +S + V C
Sbjct: 457 GDVGALEDNVESFLSQDDGDGGSLFGTLKRNSSVHTETSKPFSFNEVSCIRKSASKVICC 516
Query: 154 RMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNV 213
S DG ++AS DK +WN+++ + T ++ + + P+ +A ++ +
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 214 KLYDIRTHN-LVQYYSIHNEAVTQVAIHPSGSYIL-TASKDGKMKILDLLEGHPIFTLSG 271
K++D ++ S H V + HP + +L + + ++ D+ +
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINAS----CVRA 632
Query: 272 HNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
G V F P F +A + V I+
Sbjct: 633 VKGASTQVRFQPRTGQFLAAASENTVSIF 661
Score = 39.5 bits (88), Expect = 0.010
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKY 77
KGH + + ++ ++PN + +A+ S +++V LW L + V F S
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVS-EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPD 732
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
+ + + +W T+ H + ++ S + +AS DK VK+W
Sbjct: 733 LLVIGGYQAIELW-NTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 33.9 bits (74), Expect = 0.52
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 280 NFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEGQNMITGQR 324
+FS G +SAG DK VFIW N L ES E ++IT R
Sbjct: 517 SFSYDGKLLASAGHDKKVFIW--NMETLQVESTPEEHAHIITDVR 559
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 94.3 bits (224), Expect = 3e-19
Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 11/242 (4%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTF-SSSGKY 77
H + IT + + PN Q+ATSS D ++ +WD R GH VM + F +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS-THK 136
+ S + +R W + + A +Q V+F + + A+ + V ++ +
Sbjct: 611 LCSCDSNNDIRFWDINASCVRAVKGASTQ----VRFQPRTGQFLAAASENTVSIFDIENN 666
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH-L 195
+K ++ F GH++ V S +G ++AS S+D + KLW+L SG+CIH + G+ H +
Sbjct: 667 NKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSN-SGNKFHSV 724
Query: 196 AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKM 255
+HPS + V + ++L++ N + H ++ +A PS + +AS D +
Sbjct: 725 VFHPSYPDLLVIGGYQAIELWN-TMENKCMTVAGHECVISALAQSPSTGVVASASHDKSV 783
Query: 256 KI 257
KI
Sbjct: 784 KI 785
Score = 87.8 bits (208), Expect = 3e-17
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 8/240 (3%)
Query: 66 VMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASD 125
V+ +FS GK +ASA DK V IW + H+ + V+F + +++ T+S
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSF 572
Query: 126 DKVVKLW-STHKHKFISSFVGHTNWVRCARM-SNDGSIIASCSDDKSTKLWNLDSGECIH 183
DK +K+W ++ F+ + GH V ++ SC + + W++++ C+
Sbjct: 573 DKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCV- 630
Query: 184 TYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHN-LVQYYSIHNEAVTQVAIHPS 242
+ +KG + + P A S V ++DI +N V + H+ V V P+
Sbjct: 631 --RAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPN 688
Query: 243 GSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKT 302
G + + S+D +K+ L G I LS ++V F P+ G + + +W T
Sbjct: 689 GELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNT 747
Score = 80.6 bits (190), Expect = 5e-15
Identities = 59/269 (21%), Positives = 126/269 (46%), Gaps = 9/269 (3%)
Query: 36 IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVT 95
+A++ D V +W++ + H + DV F + +A++S DKT++IW +
Sbjct: 525 LASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDP 584
Query: 96 G-STGMFKAHSQTVRSVQFSSDGSKIITASD-DKVVKLWSTHKHKFISSFVGHTNWVRCA 153
G H+ V S+ F ++++ + D + ++ W + + + G + VR
Sbjct: 585 GYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQVRF- 642
Query: 154 RMSNDGSIIASCSDDKSTKLWNLD-SGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGN 212
G +A+ S++ + +++++ + + ++ +K + + W P+G VA + S
Sbjct: 643 -QPRTGQFLAAASEN-TVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVA-SVSEDA 699
Query: 213 VKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGH 272
VKL+ + + + + S V HPS +L +++ + +E + T++GH
Sbjct: 700 VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTME-NKCMTVAGH 758
Query: 273 NGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
++A+ SP+ +SA DK V IWK
Sbjct: 759 ECVISALAQSPSTGVVASASHDKSVKIWK 787
Score = 64.1 bits (149), Expect = 4e-10
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 8/201 (3%)
Query: 113 FSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTK 172
FS DG + +A DK V +W+ + S+ H + + R + + +A+ S DK+ K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 173 LWNL-DSGECIHTYKDLKGHGLHLAWHPSGC-YVAVATSHGNVKLYDIRTHNLVQYYSIH 230
+W+ D G + T + + +HP + S+ +++ +DI + V+
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAV--- 633
Query: 231 NEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHP-IFTLSGHNGPVNAVNFSPTGDTFS 289
A TQV P L A+ + + I D+ + + GH+ V++V +SP G+ +
Sbjct: 634 KGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVA 693
Query: 290 SAGDDKLVFIWKTNFTDLSSE 310
S +D V +W + D E
Sbjct: 694 SVSED-AVKLWSLSSGDCIHE 713
Score = 40.7 bits (91), Expect = 0.005
Identities = 40/209 (19%), Positives = 81/209 (38%), Gaps = 8/209 (3%)
Query: 96 GSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKF--ISSFVGHTNWVRCA 153
G G + + ++ S GS T + V ++ F +S + V C
Sbjct: 457 GDVGALEDNVESFLSQDDGDGGSLFGTLKRNSSVHTETSKPFSFNEVSCIRKSASKVICC 516
Query: 154 RMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNV 213
S DG ++AS DK +WN+++ + T ++ + + P+ +A ++ +
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 214 KLYDIRTHN-LVQYYSIHNEAVTQVAIHPSGSYIL-TASKDGKMKILDLLEGHPIFTLSG 271
K++D ++ S H V + HP + +L + + ++ D+ +
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINAS----CVRA 632
Query: 272 HNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
G V F P F +A + V I+
Sbjct: 633 VKGASTQVRFQPRTGQFLAAASENTVSIF 661
Score = 39.5 bits (88), Expect = 0.010
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKY 77
KGH + + ++ ++PN + +A+ S +++V LW L + V F S
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVS-EDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPD 732
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
+ + + +W T+ H + ++ S + +AS DK VK+W
Sbjct: 733 LLVIGGYQAIELW-NTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 33.9 bits (74), Expect = 0.52
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 280 NFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEGQNMITGQR 324
+FS G +SAG DK VFIW N L ES E ++IT R
Sbjct: 517 SFSYDGKLLASAGHDKKVFIW--NMETLQVESTPEEHAHIITDVR 559
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 92.7 bits (220), Expect = 1e-18
Identities = 56/195 (28%), Positives = 85/195 (43%)
Query: 100 MFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDG 159
+ + H VRSV F T S D+ +K+W + GH VR +SN
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRH 230
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIR 219
+ + S DDK K W+L+ + I +Y LA HP+ + +++DIR
Sbjct: 231 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIR 290
Query: 220 THNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV 279
T + S H+ V V P+ ++T S D +K DL G + TL+ H V A+
Sbjct: 291 TKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAM 350
Query: 280 NFSPTGDTFSSAGDD 294
P + F+SA D
Sbjct: 351 TLHPKENAFASASAD 365
Score = 75.8 bits (178), Expect = 1e-13
Identities = 62/294 (21%), Positives = 111/294 (37%), Gaps = 11/294 (3%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
++GH + ++ ++P+++ T S D ++ +WD+ + GH E V + S+
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
YM SA DK V+ W + H V + ++T D V ++W
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRT 291
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLA 196
I + GH N V + + S D + K W+L G+ + T K +
Sbjct: 292 KMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMT 351
Query: 197 WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMK 256
HP A A++ K + S + +A++ G ++T +G +
Sbjct: 352 LHPKENAFASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVNEDG-VMVTGGDNGSIW 410
Query: 257 ILDLLEGHPI---------FTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
D GH +L G + A + TG + DK + +WK
Sbjct: 411 FWDWKSGHSFQQSETIVQPGSLESEAG-IYAACYDNTGSRLVTCEADKTIKMWK 463
Score = 67.7 bits (158), Expect = 3e-11
Identities = 44/177 (24%), Positives = 71/177 (40%), Gaps = 9/177 (5%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
L GH N + +++ P D Q+ T S D ++ WDLR H ++V +T
Sbjct: 298 LSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKEN 357
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
ASAS D T + +P M + ++ + DG ++T D+ + W
Sbjct: 358 AFASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVNEDG-VMVTGGDNGSIWFWDWKS 416
Query: 137 -HKFISS-------FVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTY 185
H F S + + A N GS + +C DK+ K+W D T+
Sbjct: 417 GHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMWKEDENATPETH 473
Score = 66.9 bits (156), Expect = 6e-11
Identities = 40/160 (25%), Positives = 67/160 (41%)
Query: 145 GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYV 204
GH WVR + S D++ K+W++ +G T LA Y+
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYM 233
Query: 205 AVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGH 264
A VK +D+ + +++ Y H V +A+HP+ +LT +D ++ D+
Sbjct: 234 FSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKM 293
Query: 265 PIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNF 304
IF LSGH+ V +V PT + D + W +
Sbjct: 294 QIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRY 333
Score = 66.5 bits (155), Expect = 8e-11
Identities = 59/254 (23%), Positives = 101/254 (39%), Gaps = 11/254 (4%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
LK L GH + L + + ++ D V WDL + GH V +
Sbjct: 210 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALH 269
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
+ + + RD R+W H TV SV +++T S D +K W
Sbjct: 270 PTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 329
Query: 133 STHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHG 192
K +S+ H VR + + AS S D +TK ++L GE H +
Sbjct: 330 DLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASAD-NTKKFSLPKGEFCHNMLSQQKTI 388
Query: 193 LH-LAWHPSGCYVAVATSHGNVKLYDIR-------THNLVQYYSIHNEAVTQVAIHP-SG 243
++ +A + G V +G++ +D + + +VQ S+ +EA A + +G
Sbjct: 389 INAMAVNEDGVMV-TGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTG 447
Query: 244 SYILTASKDGKMKI 257
S ++T D +K+
Sbjct: 448 SRLVTCEADKTIKM 461
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 92.7 bits (220), Expect = 1e-18
Identities = 73/299 (24%), Positives = 131/299 (43%), Gaps = 22/299 (7%)
Query: 22 NAITALYYNPNDQQIATSSLDNSVLLWDLR-GTMRSYRFQGHDEAVMDVTFSSSGKYMAS 80
N + L ++P I S + LWD R GT+ RF H+ V V F +S S
Sbjct: 10 NRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLID-RFDEHEGPVRGVHFHNSQPLFVS 68
Query: 81 ASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFI 140
D +++W H +R+VQF + I++ASDD+ +++W+ I
Sbjct: 69 GGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCI 128
Query: 141 SSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPS 200
S GH ++V CA ++ S S D++ ++W++ + LK S
Sbjct: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA---------LKKKS------AS 173
Query: 201 GCYVAVATSHGNVKLYDIRTHNLVQY-YSIHNEAVTQVAIHPSGSYILTASKDGKMKI-- 257
+ S N L+ +V+Y H+ V + HP+ I++ + D ++K+
Sbjct: 174 PADDLMRFSQMNSDLFG-GVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWR 232
Query: 258 LDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW-KTNFTDLSSESKENE 315
++ + + TL GH V++V F D S +DK + +W T T + + +E++
Sbjct: 233 MNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHD 291
Score = 83.0 bits (196), Expect = 9e-16
Identities = 52/248 (20%), Positives = 108/248 (43%), Gaps = 15/248 (6%)
Query: 58 RFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
+F+ V ++F ++ ++ +++W + F H VR V F +
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQ 63
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
++ DD +K+W+ H+ + + +GH +++R + ++ I S SDD++ ++WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 123
Query: 178 SGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQV 237
S CI + + ++HP V A+ V+++DI A+ +
Sbjct: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALKKK 170
Query: 238 AIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLV 297
+ P+ + + + + ++ + L GH+ VN +F PT S DD+ V
Sbjct: 171 SASPADDLMRFSQMNS--DLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQV 228
Query: 298 FIWKTNFT 305
+W+ N T
Sbjct: 229 KLWRMNET 236
Score = 64.5 bits (150), Expect = 3e-10
Identities = 60/260 (23%), Positives = 110/260 (42%), Gaps = 24/260 (9%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
L GH + I + ++ + I ++S D ++ +W+ + GH+ VM +F
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRS--VQFSSDGSKIITASDDKVVKLWST 134
+ SAS D+TVR+W G K S + ++FS S + D V
Sbjct: 149 LVVSASLDQTVRVW------DIGALKKKSASPADDLMRFSQMNSDLFGGVDAIV------ 196
Query: 135 HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH 194
K++ GH V A +I S +DD+ KLW ++ + L+GH +
Sbjct: 197 ---KYV--LEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEV-DTLRGHMNN 250
Query: 195 LA---WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASK 251
++ +H + + +++++D +Q + ++ +A+HP + +L A
Sbjct: 251 VSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEIN-LLAAGH 309
Query: 252 DGKMKILDLLEGHPIFTLSG 271
D M + L P F LSG
Sbjct: 310 DNGMIVFKLERERPAFALSG 329
Score = 49.6 bits (113), Expect = 1e-05
Identities = 23/113 (20%), Positives = 50/113 (44%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA 79
H+ + ++++ + + D + +W+ + + GH + + V F ++
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIV 109
Query: 80 SASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
SAS D+T+RIW + H+ V F +++AS D+ V++W
Sbjct: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Score = 39.9 bits (89), Expect = 0.008
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTM--RSYRFQGHDEAVMDVT 70
+K L+GH + ++P I + + D V LW + T +GH V V
Sbjct: 196 VKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVM 255
Query: 71 FSSSGKYMASASRDKTVRIWVPT 93
F + + S S DK++R+W T
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWDAT 278
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 92.3 bits (219), Expect = 1e-18
Identities = 59/250 (23%), Positives = 119/250 (47%), Gaps = 6/250 (2%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
+K++L + ++ +P + I S ++ +W+ + + + F+ + V F
Sbjct: 7 IKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFV 66
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
+ +++ + + D +R++ +F+AHS +R V ++++SDD ++KLW
Sbjct: 67 ARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 133 STHKHKFISS-FVGHTNWVRCARMS-NDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
K + F GH+++V + D + AS S D++ K+WNL S + T D
Sbjct: 127 DWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
Query: 191 HGLHLAWHPSG---CYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYIL 247
G++ + +G Y+ + K++D +T + VQ H V+ V HP I+
Sbjct: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIII 245
Query: 248 TASKDGKMKI 257
T S+DG ++I
Sbjct: 246 TGSEDGTVRI 255
Score = 80.6 bits (190), Expect = 5e-15
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDL-RGTMRSYRFQGHDEAVMDVTFSS 73
K + H + I + +P + +SS D + LWD +G + F+GH VM VTF+
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNP 152
Query: 74 SG-KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK--IITASDDKVVK 130
ASAS D+T++IW AH + V V + + G K +IT SDD K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Query: 131 LWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
+W + + GHT+ V + II + S+D + ++W+ + + ++
Sbjct: 213 VWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT----YRLENTLN 268
Query: 191 HGLHLAW 197
+GL W
Sbjct: 269 YGLERVW 275
Score = 75.4 bits (177), Expect = 2e-13
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 4/241 (1%)
Query: 64 EAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITA 123
E V V + ++ ++ T+ IW F+ VRS +F + ++
Sbjct: 16 ERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAG 75
Query: 124 SDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSG-ECI 182
+DD +++++ + + F H++++RC + + S SDD KLW+ + G C
Sbjct: 76 ADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACT 135
Query: 183 HTYKDLKGHGLHLAWHPSGCYV-AVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHP 241
++ + + + ++P A A+ +K++++ + + H + V V
Sbjct: 136 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
Query: 242 SGS--YILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFI 299
G Y++T S D K+ D + TL GH V+AV F P + +D V I
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
Query: 300 W 300
W
Sbjct: 256 W 256
Score = 63.7 bits (148), Expect = 6e-10
Identities = 42/203 (20%), Positives = 85/203 (41%), Gaps = 4/203 (1%)
Query: 59 FQGHDEAVMDVTFSSSGKYMASASRDKTVRIWV-PTVTGSTGMFKAHSQTVRSVQFS-SD 116
F+ H + + V + Y+ S+S D +++W T +F+ HS V V F+ D
Sbjct: 95 FEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKD 154
Query: 117 GSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGS--IIASCSDDKSTKLW 174
+ +AS D+ +K+W+ + H V C G + + SDD + K+W
Sbjct: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
Query: 175 NLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAV 234
+ + C+ T + + + +HP + + G V+++ T+ L + E V
Sbjct: 215 DYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
Query: 235 TQVAIHPSGSYILTASKDGKMKI 257
+ S ++ +G + +
Sbjct: 275 WAIGYIKSSRRVVIGYDEGTIMV 297
Score = 54.8 bits (126), Expect = 3e-07
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 213 VKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTL-SG 271
+++Y+ T + V+ + H++ + VA+HP+ Y+L++S D +K+ D +G + G
Sbjct: 81 IRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEG 140
Query: 272 HNGPVNAVNFSPTG-DTFSSAGDDKLVFIWKTNFTD 306
H+ V V F+P +TF+SA D+ + IW D
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPD 176
Score = 38.3 bits (85), Expect = 0.024
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Query: 17 LKGHKNAITAL-YYNPNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
L H+ + + Y+ D+ + T S D++ +WD + +GH V V F
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVV 129
+ + S D TVRIW T + V ++ + +++ D+ +
Sbjct: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 91.9 bits (218), Expect = 2e-18
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 7/229 (3%)
Query: 77 YMASASRDKTVRIWVPTVTGST--GMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
+ S S D V+IW P++ GS K H+ TVR++ SSD KI++ SDD V +W
Sbjct: 869 FFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDK 926
Query: 135 HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH 194
+ + GH + V C +M + G + + + D + K+W++ + C+ T L
Sbjct: 927 QTTQLLEELKGHDSQVSCVKMLS-GERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILS 985
Query: 195 LAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGK 254
L + S +A A ++DIR+ + H + + + + ++T S D
Sbjct: 986 LEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LITGSDDWT 1043
Query: 255 MKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
++ + G L+ H GPV +V +SP + D L+ W+ +
Sbjct: 1044 ARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWEND 1092
Score = 83.0 bits (196), Expect = 9e-16
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 5/169 (2%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
L+ LKGH + A+ + + +I + S D SV++WD + T +GHD V V
Sbjct: 891 LRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKML 948
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
S G+ + +A+ D TV++W S + S+++ + A D V +W
Sbjct: 949 S-GERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIW 1007
Query: 133 STHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGEC 181
K + GHT W+R RM D I SDD + ++W++ G C
Sbjct: 1008 DIRSGKQMHKLKGHTKWIRSIRMVEDTLITG--SDDWTARVWSVSRGSC 1054
Score = 71.7 bits (168), Expect = 2e-12
Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 16/233 (6%)
Query: 80 SASRDKTVRIWVPTVTGSTGMFKA-HSQTVRSV----QFSSDGSKIITASDDKVVKLW-- 132
+A+ K ++ V + G G A HS T R V D I+ S D +VK+W
Sbjct: 825 TAAAQKKIQTNVRVLKGHGGAVTALHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDP 884
Query: 133 STHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHG 192
S + ++ GHT VR +S+D I S SDD S +W+ + + + ++LKGH
Sbjct: 885 SLRGSELRATLKGHTGTVRA--ISSDRGKIVSGSDDLSVIVWDKQTTQLL---EELKGHD 939
Query: 193 LHLAWHP--SGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTAS 250
++ SG V A G VK++D+RT V + A+ + S + A
Sbjct: 940 SQVSCVKMLSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAG 999
Query: 251 KDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
+D I D+ G + L GH + ++ DT + DD +W +
Sbjct: 1000 RDTVANIWDIRSGKQMHKLKGHTKWIRSIRM--VEDTLITGSDDWTARVWSVS 1050
Score = 66.9 bits (156), Expect = 6e-11
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 21/262 (8%)
Query: 17 LKGHKNAITALYYNPN--------DQQIA----TSSLDNSVLLWD--LRGTMRSYRFQGH 62
LKGH A+TAL+ D++ A + S D V +WD LRG+ +GH
Sbjct: 839 LKGHGGAVTALHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSELRATLKGH 898
Query: 63 DEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIIT 122
V ++ S GK + S S D +V +W T K H V V+ S G +++T
Sbjct: 899 TGTVRAIS-SDRGK-IVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLS-GERVLT 955
Query: 123 ASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECI 182
A+ D VK+W +++ ++ + + I+A+ D +W++ SG+ +
Sbjct: 956 AAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQM 1015
Query: 183 HTYKDLKGHGLHL-AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHP 241
H LKGH + + + + +++ + + + H V V P
Sbjct: 1016 H---KLKGHTKWIRSIRMVEDTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSP 1072
Query: 242 SGSYILTASKDGKMKILDLLEG 263
I+T S DG ++ + EG
Sbjct: 1073 FDKGIITGSADGLLRFWENDEG 1094
Score = 40.3 bits (90), Expect = 0.006
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 232 EAVTQVAIHPSGSYILTASKDGKMKILD-LLEGHPI-FTLSGHNGPVNAVNFSPTGDTFS 289
E V + ++ S D +KI D L G + TL GH G V A++ S G S
Sbjct: 856 EVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAIS-SDRGKIVS 914
Query: 290 SAGDDKLVFIWKTNFTDLSSESKENEGQ----NMITGQRHLT 327
+ DD V +W T L E K ++ Q M++G+R LT
Sbjct: 915 GS-DDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGERVLT 955
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 91.1 bits (216), Expect = 3e-18
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 3/198 (1%)
Query: 100 MFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDG 159
+ + H VRSV F T S D+ +K+W + GH VR +SN
Sbjct: 165 VLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRH 224
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH-LAWHPSGCYVAVATSHGNVKLYDI 218
+ + S DDK K W+L+ + I +Y HG++ LA HP+ V +++DI
Sbjct: 225 TYMFSAGDDKQVKCWDLEQNKVIRSYHG-HLHGVYCLALHPTLDVVLTGGRDSVCRVWDI 283
Query: 219 RTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNA 278
RT + + H+ V V P+ ++T S D +K DL G + T++ H V A
Sbjct: 284 RTKMQI-FVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRA 342
Query: 279 VNFSPTGDTFSSAGDDKL 296
+ P + F SA D +
Sbjct: 343 MALHPKENDFVSASADNI 360
Score = 72.5 bits (170), Expect = 1e-12
Identities = 65/298 (21%), Positives = 117/298 (39%), Gaps = 20/298 (6%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
L+GH + ++ ++P+++ T S D ++ +WD+ + GH V + S+
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
YM SA DK V+ W + H V + ++T D V ++W
Sbjct: 226 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRT 285
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLA 196
I ++ D +I S D + K W+L G+ + T + K +A
Sbjct: 286 KMQIFVLPHDSDVFSVLARPTDPQVITG-SHDSTIKFWDLRYGKSMATITNHKKTVRAMA 344
Query: 197 WHPSGCYVAVATSHGNVKLYDIR----THNLVQYYSIHNEAVTQVAIHPSGSYILTASKD 252
HP V+ S N+K + + HN++ S+ + + VA++ G ++T
Sbjct: 345 LHPKE-NDFVSASADNIKKFSLPKGEFCHNML---SLQRDIINAVAVNEDG-VMVTGGDK 399
Query: 253 GKMKILDLLEGHPI---------FTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
G + D GH +L G + A + TG + DK + +WK
Sbjct: 400 GGLWFWDWKSGHNFQRAETIVQPGSLESEAG-IYAACYDQTGSRLVTCEGDKTIKMWK 456
Score = 59.3 bits (137), Expect = 1e-08
Identities = 60/254 (23%), Positives = 100/254 (39%), Gaps = 12/254 (4%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
LK L GH + L + + ++ D V WDL + GH V +
Sbjct: 204 LKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALH 263
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
+ + + RD R+W T H V SV ++IT S D +K W
Sbjct: 264 PTLDVVLTGGRDSVCRVW-DIRTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFW 322
Query: 133 STHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHG 192
K +++ H VR + + S S D + K ++L GE H L+
Sbjct: 323 DLRYGKSMATITNHKKTVRAMALHPKENDFVSASAD-NIKKFSLPKGEFCHNMLSLQRDI 381
Query: 193 LH-LAWHPSGCYVAVATSHGNVKLYDIRT-HN------LVQYYSIHNEAVTQVAIH-PSG 243
++ +A + G V G + +D ++ HN +VQ S+ +EA A + +G
Sbjct: 382 INAVAVNEDGVMV-TGGDKGGLWFWDWKSGHNFQRAETIVQPGSLESEAGIYAACYDQTG 440
Query: 244 SYILTASKDGKMKI 257
S ++T D +K+
Sbjct: 441 SRLVTCEGDKTIKM 454
Score = 50.0 bits (114), Expect = 7e-06
Identities = 38/174 (21%), Positives = 65/174 (37%), Gaps = 9/174 (5%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA 79
H + + ++ P D Q+ T S D+++ WDLR H + V +
Sbjct: 294 HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFV 353
Query: 80 SASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW---STHK 136
SAS D + +P M + +V + DG ++T D + W S H
Sbjct: 354 SASADNIKKFSLPKGEFCHNMLSLQRDIINAVAVNEDGV-MVTGGDKGGLWFWDWKSGHN 412
Query: 137 HKFISSFVGHTNW-----VRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTY 185
+ + V + + A GS + +C DK+ K+W D T+
Sbjct: 413 FQRAETIVQPGSLESEAGIYAACYDQTGSRLVTCEGDKTIKMWKEDEDATPETH 466
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 90.6 bits (215), Expect = 4e-18
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 7/205 (3%)
Query: 101 FKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISS----FVGHTNWV-RCARM 155
++ H + V SV ++S+G+K+ + S D+ ++W+ H + GHT+ V +
Sbjct: 16 YQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWD 75
Query: 156 SNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKL 215
++A+ S DKS +LW+ SG+C +L G +++ + P G +VAV + +
Sbjct: 76 PKHSDLVATASGDKSVRLWDARSGKCTQQV-ELSGENINITYKPDGTHVAVGNRDDELTI 134
Query: 216 YDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGP 275
D+R + + E V ++A + G + + G +++L P+ TL+ H
Sbjct: 135 LDVRKFKPLHRRKFNYE-VNEIAWNMPGDFFFLTTGLGTVEVLSYPSLKPLDTLTAHTAG 193
Query: 276 VNAVNFSPTGDTFSSAGDDKLVFIW 300
+ P G F+ D LV +W
Sbjct: 194 CYCIAIDPKGRYFAVGSADSLVSLW 218
Score = 79.4 bits (187), Expect = 1e-14
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 7/252 (2%)
Query: 53 TMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGM----FKAHSQTV 108
++ S +QGH + V V ++S+G +AS S D+T RIW G + K H+ +V
Sbjct: 10 SLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSV 69
Query: 109 RSVQFSSDGSKII-TASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSD 167
+ + S ++ TAS DK V+LW K + DG+ +A +
Sbjct: 70 DQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINIT-YKPDGTHVAVGNR 128
Query: 168 DKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYY 227
D + ++ + +H K +AW+ G + + T G V++ + +
Sbjct: 129 DDELTILDVRKFKPLHRRK-FNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSLKPLDTL 187
Query: 228 SIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDT 287
+ H +AI P G Y S D + + D+ + + T + PV ++F+ +G+
Sbjct: 188 TAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEY 247
Query: 288 FSSAGDDKLVFI 299
+SA +D + I
Sbjct: 248 IASASEDLFIDI 259
Score = 72.1 bits (169), Expect = 2e-12
Identities = 61/298 (20%), Positives = 133/298 (44%), Gaps = 9/298 (3%)
Query: 4 DKVTTPEPCL-KKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDL----RGTMRSYR 58
++ T P L ++ +GHK + ++ +N N ++A+ S+D + +W++ +
Sbjct: 2 EETTIPFKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLE 61
Query: 59 FQGHDEAVMDVTFS-SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
+GH ++V + + +A+AS DK+VR+W T + + + ++ + DG
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENI-NITYKPDG 120
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
+ + + D + + K K + + V + G + + ++ +
Sbjct: 121 THVAVGNRDDELTILDVRKFKPLHRRKFNYE-VNEIAWNMPGDFFFLTTGLGTVEVLSYP 179
Query: 178 SGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQV 237
S + + T +A P G Y AV ++ V L+DI ++ ++ V +
Sbjct: 180 SLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTI 239
Query: 238 AIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDK 295
+ + SG YI +AS+D + I ++ G + + +N+V ++P + + AGDDK
Sbjct: 240 SFNYSGEYIASASEDLFIDIANVQTGRTVHQIP-CRAAMNSVEWNPKYNLLAYAGDDK 296
Score = 64.9 bits (151), Expect = 2e-10
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 4/242 (1%)
Query: 16 QLKGHKNAITALYYNPNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
+LKGH +++ L ++P +AT+S D SV LWD R + + + E + ++T+
Sbjct: 61 ELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENI-NITYKPD 119
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
G ++A +RD + I K + + V + ++ G + V++ S
Sbjct: 120 GTHVAVGNRDDELTILDVRKFKPLHRRKFNYE-VNEIAWNMPGDFFFLTTGLGTVEVLSY 178
Query: 135 HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH 194
K + + HT C + G A S D LW++ C+ T+ L+
Sbjct: 179 PSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRT 238
Query: 195 LAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGK 254
++++ SG Y+A A+ + + +++T V A+ V +P + + A D
Sbjct: 239 ISFNYSGEYIASASEDLFIDIANVQTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDKN 297
Query: 255 MK 256
K
Sbjct: 298 PK 299
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 90.6 bits (215), Expect = 4e-18
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 11/236 (4%)
Query: 71 FSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVK 130
FSS GK +ASA DK +W + H+ + ++FS ++ T+S DK V+
Sbjct: 659 FSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVR 718
Query: 131 LW-STHKHKFISSFVGHTNWVRCARMSN-DGSIIASCSDDKSTKLWNLDSGECIHTYKDL 188
+W + +K + +F+GH++ V +I SC +D + W++++G C Y
Sbjct: 719 VWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVY--- 775
Query: 189 KGHGLHLAWHPS-GCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYIL 247
KG + + P G Y+A A+S V + D+ T + H + V PSG ++
Sbjct: 776 KGGSTQIRFQPRVGKYLA-ASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLA 834
Query: 248 TASKDGKMKILDL---LEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ S+D +K+ L EG + LS + + F P + G + + +W
Sbjct: 835 SVSED-MVKVWTLGTGSEGECVHELSCNGNKFQSCVFHPAYPSLLVIGCYQSLELW 889
Score = 84.6 bits (200), Expect = 3e-16
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 10/249 (4%)
Query: 14 KKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTFS 72
K L+ H IT + ++P+ ++ATSS D +V +WD S R F GH V + F
Sbjct: 686 KTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFH 745
Query: 73 S-SGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKL 131
+ S D +R W T ++K S +R F K + AS +V +
Sbjct: 746 PIKDDLICSCDNDNEIRYWSINNGSCTRVYKGGSTQIR---FQPRVGKYLAASSANLVNV 802
Query: 132 WSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNL---DSGECIHTYKDL 188
S GH N + G +AS S+D K+W L GEC+H
Sbjct: 803 LDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSED-MVKVWTLGTGSEGECVHELSCN 861
Query: 189 KGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILT 248
+HP+ + V + +++L+++ + N H +T +A+ + + +
Sbjct: 862 GNKFQSCVFHPAYPSLLVIGCYQSLELWNM-SENKTMTLPAHEGLITSLAVSTATGLVAS 920
Query: 249 ASKDGKMKI 257
AS D +K+
Sbjct: 921 ASHDKLVKL 929
Score = 82.6 bits (195), Expect = 1e-15
Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 16/286 (5%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASR 83
+T +++ + + +A++ D +LW + H + D+ FS S +A++S
Sbjct: 654 VTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSF 713
Query: 84 DKTVRIWVPTVTG-STGMFKAHSQTVRSVQFSSDGSKIITASD-DKVVKLWSTHKHKFIS 141
DKTVR+W G S F HS V S+ F +I + D D ++ WS +
Sbjct: 714 DKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTR 773
Query: 142 SFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHG---LHLAWH 198
+ G + +R G +A+ S L N+ E L+GH + W
Sbjct: 774 VYKGGSTQIRF--QPRVGKYLAA----SSANLVNVLDVETQAIRHSLQGHANPINSVCWD 827
Query: 199 PSGCYVAVATSHGNVKLYDIRTHN---LVQYYSIHNEAVTQVAIHPSGSYILTASKDGKM 255
PSG ++A + S VK++ + T + V S + HP+ +L +
Sbjct: 828 PSGDFLA-SVSEDMVKVWTLGTGSEGECVHELSCNGNKFQSCVFHPAYPSLLVIGCYQSL 886
Query: 256 KILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
++ ++ E + TL H G + ++ S +SA DKLV +WK
Sbjct: 887 ELWNMSE-NKTMTLPAHEGLITSLAVSTATGLVASASHDKLVKLWK 931
Score = 77.0 bits (181), Expect = 6e-14
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 6/201 (2%)
Query: 102 KAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSI 161
+A + V FSSDG + +A DK LW T K ++ HT + R S
Sbjct: 648 RASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLR 707
Query: 162 IASCSDDKSTKLWNLDS-GECIHTYKDLKGHGLHLAWHP-SGCYVAVATSHGNVKLYDIR 219
+A+ S DK+ ++W+ D+ G + T+ L +HP + + ++ + I
Sbjct: 708 LATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSIN 767
Query: 220 THNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV 279
+ + Y TQ+ P L AS + +LD+ +L GH P+N+V
Sbjct: 768 NGSCTRVY---KGGSTQIRFQPRVGKYLAASSANLVNVLDVETQAIRHSLQGHANPINSV 824
Query: 280 NFSPTGDTFSSAGDDKLVFIW 300
+ P+GD +S +D +V +W
Sbjct: 825 CWDPSGDFLASVSED-MVKVW 844
Score = 44.4 bits (100), Expect = 4e-04
Identities = 34/160 (21%), Positives = 65/160 (40%), Gaps = 5/160 (3%)
Query: 140 ISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHP 199
++S T V C S+DG ++AS DK LW D+ + T ++ + + P
Sbjct: 644 VNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSP 703
Query: 200 SGCYVAVATSHGNVKLYDIRTHNL-VQYYSIHNEAVTQVAIHP-SGSYILTASKDGKMKI 257
S +A ++ V+++D ++ + H+ VT + HP I + D +++
Sbjct: 704 SQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRY 763
Query: 258 LDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLV 297
+ G + G + F P + +A LV
Sbjct: 764 WSINNGS---CTRVYKGGSTQIRFQPRVGKYLAASSANLV 800
Score = 35.9 bits (79), Expect = 0.13
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRS----YRFQGHDEAVMD 68
++ L+GH N I ++ ++P+ +A+ S ++ V +W L GT + +
Sbjct: 810 IRHSLQGHANPINSVCWDPSGDFLASVS-EDMVKVWTL-GTGSEGECVHELSCNGNKFQS 867
Query: 69 VTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKV 128
F + + +++ +W + T AH + S+ S+ + +AS DK+
Sbjct: 868 CVFHPAYPSLLVIGCYQSLELWNMS-ENKTMTLPAHEGLITSLAVSTATGLVASASHDKL 926
Query: 129 VKLW 132
VKLW
Sbjct: 927 VKLW 930
Score = 32.3 bits (70), Expect = 1.6
Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 7/124 (5%)
Query: 725 NKHHQNMNMPYNNTYQQNQYKDRHMRNDRNPNDRGPQQNYNHNSSTMDGLVDATSKLNLL 784
N+ H + Y T Q + +++ ++ ++P QQ M L L
Sbjct: 68 NEKHSEVAASYIET-QMIKAREQQLQQSQHPQVSQQQQQQQQQQIQMQQL------LLQR 120
Query: 785 SNQSRIDEQQVHNYQQHTDQSYQSKQTYPSNHSQDIPPFRRSNDLHQDGYQRRQQVPNGY 844
+ Q + +QQ H++ Q Q Q +Q Q S Q + QQ P
Sbjct: 121 AQQQQQQQQQQHHHHQQQQQQQQQQQQQQQQQQQQHQNQPPSQQQQQQSTPQHQQQPTPQ 180
Query: 845 IEPQ 848
+PQ
Sbjct: 181 QQPQ 184
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 90.6 bits (215), Expect = 4e-18
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 26/301 (8%)
Query: 22 NAITALYYNPNDQQIATSSLDNSVLLWDLR-GTMRSYRFQGHDEAVMDVTFSSSGKYMAS 80
N + L ++P I S + LWD R GT+ RF H+ V V F +S S
Sbjct: 10 NRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLID-RFDEHEGPVRGVHFHNSQPLFVS 68
Query: 81 ASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFI 140
D +++W H +R+VQF + I++ASDD+ +++W+ +
Sbjct: 69 GGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCV 128
Query: 141 SSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDS--GECIHTYKDLKGHGLHLAWH 198
S GH ++V CA ++ S S D++ ++W++ + + + D+ + L
Sbjct: 129 SVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDI----MRLTQM 184
Query: 199 PSGCYVAVATSHGNVKLYDIRTHNLVQY-YSIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
S + V +V+Y H+ V A HP+ I++ + D ++K+
Sbjct: 185 NSDLFGGVDA--------------IVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKL 230
Query: 258 --LDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW-KTNFTDLSSESKEN 314
++ + + TL GH V++V F D S +DK + +W T T L + +E+
Sbjct: 231 WRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREH 290
Query: 315 E 315
+
Sbjct: 291 D 291
Score = 82.2 bits (194), Expect = 2e-15
Identities = 54/249 (21%), Positives = 107/249 (42%), Gaps = 17/249 (6%)
Query: 58 RFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
+F+ V ++F ++ ++ +++W + F H VR V F +
Sbjct: 4 KFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQ 63
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
++ DD +K+W+ H+ + + +GH +++R + ++ I S SDD++ ++WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQ 123
Query: 178 SGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQV 237
S C+ + + ++HP V A+ V+++DI A+ +
Sbjct: 124 SRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI-------------GALRKK 170
Query: 238 AIHPSGSYI-LTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKL 296
+ P+ + LT +D + + L GH+ VN F PT S DD+
Sbjct: 171 TVSPADDIMRLTQMNSDLFGGVDAIVK---YVLEGHDRGVNWAAFHPTLPLIVSGADDRQ 227
Query: 297 VFIWKTNFT 305
V +W+ N T
Sbjct: 228 VKLWRMNET 236
Score = 62.9 bits (146), Expect = 1e-09
Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 20/258 (7%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
L GH + I + ++ I ++S D ++ +W+ + GH+ VM +F
Sbjct: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKED 148
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
+ SAS D+TVR+W + A +R Q +SD + D +VK
Sbjct: 149 LVVSASLDQTVRVWDIGALRKKTVSPA-DDIMRLTQMNSD----LFGGVDAIVKY----- 198
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLA 196
GH V A +I S +DD+ KLW ++ + L+GH +++
Sbjct: 199 -----VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEV-DTLRGHMNNVS 252
Query: 197 ---WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDG 253
+H + + +++++D +Q + ++ +A+HP + +L A D
Sbjct: 253 SVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMN-LLAAGHDS 311
Query: 254 KMKILDLLEGHPIFTLSG 271
M + L P F LSG
Sbjct: 312 GMIVFKLERERPAFALSG 329
Score = 49.6 bits (113), Expect = 1e-05
Identities = 23/113 (20%), Positives = 50/113 (44%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA 79
H+ + ++++ + + D + +W+ + + GH + + V F ++
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
Query: 80 SASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
SAS D+T+RIW + H+ V F +++AS D+ V++W
Sbjct: 110 SASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Score = 39.9 bits (89), Expect = 0.008
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTM--RSYRFQGHDEAVMDVT 70
+K L+GH + ++P I + + D V LW + T +GH V V
Sbjct: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVM 255
Query: 71 FSSSGKYMASASRDKTVRIWVPT 93
F + + S S DK++R+W T
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWDAT 278
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 89.0 bits (211), Expect = 1e-17
Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 13/294 (4%)
Query: 19 GHKNAITALYYNPNDQQIATSS-LDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTFSSSGK 76
GH ++A+ + P + S+ +D V +WD+ + + R + GH +AV D+ FS+ G
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGS 339
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK---IITASDDKVVKLWS 133
+A DK ++ W T TG + + V+ + D K ++ DK + W
Sbjct: 340 KFLTAGYDKNIKYW-DTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 398
Query: 134 THKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGL 193
+ + + H V ++ + SDDKS ++W I + H +
Sbjct: 399 INTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 458
Query: 194 -HLAWHPSGCYVAVATSHGNVKLYDIRTH---NLVQYYSIHNEA--VTQVAIHPSGSYIL 247
++ HP+G ++A + + +Y R N + ++ H A QV P G +++
Sbjct: 459 PSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 518
Query: 248 TASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDT-FSSAGDDKLVFIW 300
+ +GK D TL HNG + P + ++ G D L+ W
Sbjct: 519 SGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYW 572
Score = 88.2 bits (209), Expect = 2e-17
Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 12/258 (4%)
Query: 57 YRFQGHDEAVMDVTF-SSSGKYMASASRDKTVRIWVPTVTGST-GMFKAHSQTVRSVQFS 114
+ + GH + V + F G + SA D V+IW +G + H++ VR + FS
Sbjct: 276 HTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFS 335
Query: 115 SDGSKIITASDDKVVKLWSTHKHKFISSF-VGHTNWVRCARMSND-GSIIASCSDDKSTK 172
+DGSK +TA DK +K W T + IS+F G +V +D +I+ + DK
Sbjct: 336 NDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 395
Query: 173 LWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYS-IHN 231
W++++GE Y G + + + ++ ++++++ +++Y S H
Sbjct: 396 QWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHM 455
Query: 232 EAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPI---FTLSGH--NGPVNAVNFSPTGD 286
++ +++HP+G+++ S D ++ I E + +GH G VNFSP G
Sbjct: 456 HSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 515
Query: 287 -TFSSAGDDKLVF-IWKT 302
S G+ K F WK+
Sbjct: 516 FVMSGDGEGKCWFWDWKS 533
Score = 57.6 bits (133), Expect = 4e-08
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 30 NPND--QQIATSSL-DNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKT 86
NP+D Q I + + D ++ WD+ + + H AV +TF + + ++S DK+
Sbjct: 376 NPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 435
Query: 87 VRIW---VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISS- 142
+R+W +P V + + H ++ S+ +G+ + S D + ++ST + ++
Sbjct: 436 LRVWEFGIPVVI--KYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKK 493
Query: 143 --FVGH--TNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWH 198
F GH + S DG + S + W+ S + T K G + WH
Sbjct: 494 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWH 553
Query: 199 P-SGCYVAVATSHGNVKLYD 217
P VA G +K +D
Sbjct: 554 PLEQSKVATCGWDGLIKYWD 573
Score = 37.1 bits (82), Expect = 0.056
Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 7/163 (4%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLR-GTMRSYRFQGHDEAVMDVTFSSSGKYM 78
H A+ + + N+++ TSS D S+ +W+ + Y + H ++ ++ +G ++
Sbjct: 411 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 470
Query: 79 ASASRDKTVRIWVPT---VTGSTGMFKAH--SQTVRSVQFSSDGSKIITASDDKVVKLWS 133
A+ S D + I+ F H + V FS DG +++ + W
Sbjct: 471 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 530
Query: 134 THKHKFISSFVGHTNWVRCARMSN-DGSIIASCSDDKSTKLWN 175
K + H A + S +A+C D K W+
Sbjct: 531 WKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 88.6 bits (210), Expect = 2e-17
Identities = 67/297 (22%), Positives = 127/297 (42%), Gaps = 17/297 (5%)
Query: 53 TMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQ 112
T ++ +GH+ AV+ F+ G Y + +D+T+R+W P +K+H + VR V
Sbjct: 8 TKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVH 67
Query: 113 FSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTK 172
+SD +K + D+ V W + I F GH V + ++ S++ S D+S +
Sbjct: 68 VTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLR 127
Query: 173 LW-----NLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYY 227
+W +++ + I T+ D ++ + + + G V+ +D+R +
Sbjct: 128 VWDCRSHSVEPVQIIDTFLDTV-----MSVVLTKTEIIGGSVDGTVRTFDMRIGR--EMS 180
Query: 228 SIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDT 287
+ V ++I G+ +L D +++LD G + GH + T
Sbjct: 181 DNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSD 240
Query: 288 FSSAG--DDKLVFIWKTNFTDLSSESKENEGQNMITG-QRHLTEEGIDTITENGQIQ 341
G +D LVF W + D SK ++T H E+ + T + +G I+
Sbjct: 241 AHVIGGSEDGLVFFW--DLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIR 295
Score = 81.8 bits (193), Expect = 2e-15
Identities = 61/288 (21%), Positives = 118/288 (40%), Gaps = 6/288 (2%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
LKGH+ A+ A +N + T D ++ LW+ + ++ H V DV +S
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
S D+ V W + F+ H V +V+F+ S +++A D+ +++W
Sbjct: 74 KFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS 133
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH-L 195
H + T + + I S D + + +++ G D G ++ +
Sbjct: 134 HSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIG---REMSDNLGQPVNCI 190
Query: 196 AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIH--NEAVTQVAIHPSGSYILTASKDG 253
+ G V ++L D T L+Q Y H T + S ++++ S+DG
Sbjct: 191 SISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDG 250
Query: 254 KMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
+ DL++ + H+ V +V++ P D ++ D + +WK
Sbjct: 251 LVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVWK 298
Score = 81.8 bits (193), Expect = 2e-15
Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 8/249 (3%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
L K K H + ++ ++ + + D V WD+ +F+GHD V V F+
Sbjct: 52 LIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFN 111
Query: 73 SSGKYMASASRDKTVRIW--VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVK 130
S + SA D+++R+W + TV SV + ++II S D V+
Sbjct: 112 DSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTK--TEIIGGSVDGTVR 169
Query: 131 LWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKD--L 188
+ + +S +G V C +SNDG+ + + D + +L + +GE + YK
Sbjct: 170 TFDMRIGREMSDNLGQP--VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHIS 227
Query: 189 KGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILT 248
K S +V + G V +D+ ++ + H+ VT V+ HP +LT
Sbjct: 228 KSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLT 287
Query: 249 ASKDGKMKI 257
+S DG +++
Sbjct: 288 SSVDGTIRV 296
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 88.2 bits (209), Expect = 2e-17
Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 25/324 (7%)
Query: 8 TPEPCLKKQLKGHK-----NAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGH 62
TPE K H +++ AL ++P + +V L+ + S RF
Sbjct: 34 TPESRYWSSFKNHSTPNLVSSVAALAFSPVHPHSLAVAHSATVSLFSSQSLSSSRRFSFR 93
Query: 63 DEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFS-SDGSKII 121
D V V F S G A+ V+++ + ++HS R V++ D ++
Sbjct: 94 D-VVSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLV 152
Query: 122 TASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMS--NDGSIIASCSDDKSTKLWNLDSG 179
+ DD VVK W IS +GH ++VRC S ND S++ + S D + K+W+
Sbjct: 153 SGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVND-SMLVTGSYDHTVKVWDAR-- 209
Query: 180 ECIHTYKDLK--GHGL---HLAWHPSGCYVAVATSHGNVKLYD-IRTHNLVQYYSIHNEA 233
+HT + HGL + + PSG +A A + +VK++D I +V HN+
Sbjct: 210 --VHTSNWIAEINHGLPVEDVVYLPSGGLIATAGGN-SVKVWDLIGGGKMVCSMESHNKT 266
Query: 234 VTQVAI---HPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSS 290
VT + + + S +++ + DG MK+ D +++ P+ ++ SP G T
Sbjct: 267 VTSLRVARMESAESRLVSVALDGYMKVFDYGRAKVTYSMR-FPAPLMSLGLSPDGSTRVI 325
Query: 291 AGDDKLVFIWKTNFTDLSSESKEN 314
G + +VF K D+ K++
Sbjct: 326 GGSNGMVFAGKKKVRDVVGGQKKS 349
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 86.6 bits (205), Expect = 7e-17
Identities = 58/250 (23%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
+K++ + ++ +P + I S +V +W+ + + F+ + V F
Sbjct: 7 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFI 66
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
+++ + + D +R++ +F+AHS +R V ++++SDD ++KLW
Sbjct: 67 PRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 133 STHKHKFISS-FVGHTNWV-RCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
+ F GH+++V + D + AS S D++ K+WNL S + T D
Sbjct: 127 DWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
Query: 191 HGLHLAWHPSG---CYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYIL 247
G++ + +G Y+ + K++D +T + VQ H V+ V HP I+
Sbjct: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIII 245
Query: 248 TASKDGKMKI 257
T S+DG ++I
Sbjct: 246 TGSEDGTVRI 255
Score = 80.2 bits (189), Expect = 6e-15
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 4/247 (1%)
Query: 58 RFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
+F E V V + ++ ++ TV IW T F+ VRS +F
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRK 69
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
++ +DD +++++ + + F H++++RC + + S SDD KLW+ +
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 178 SG-ECIHTYKDLKGHGLHLAWHPSGCYV-AVATSHGNVKLYDIRTHNLVQYYSIHNEAVT 235
+G C ++ + + + ++P A A+ +K++++ + + H + V
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
Query: 236 QVAIHPSGS--YILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGD 293
V G Y++T S D K+ D + TL GH V+AV F P + +
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSE 249
Query: 294 DKLVFIW 300
D V IW
Sbjct: 250 DGTVRIW 256
Score = 77.4 bits (182), Expect = 4e-14
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLR-GTMRSYRFQGHDEAVMDVTFSS 73
K + H + I + +P + +SS D + LWD G + F+GH VM V F+
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 74 SG-KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK--IITASDDKVVK 130
ASAS D+T++IW AH + V V + + G K +IT SDD K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Query: 131 LWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
+W + + GHT+ V + II + S+D + ++W+ + + ++
Sbjct: 213 VWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT----YRLENTLN 268
Query: 191 HGLHLAW 197
+GL W
Sbjct: 269 YGLERVW 275
Score = 64.5 bits (150), Expect = 3e-10
Identities = 45/231 (19%), Positives = 94/231 (40%), Gaps = 4/231 (1%)
Query: 31 PNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW 90
P Q + + D + +++ + F+ H + + V + Y+ S+S D +++W
Sbjct: 67 PRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 91 V-PTVTGSTGMFKAHSQTVRSVQFS-SDGSKIITASDDKVVKLWSTHKHKFISSFVGHTN 148
T +F+ HS V V F+ D + +AS D+ +K+W+ + H
Sbjct: 127 DWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
Query: 149 WVRCARMSNDGS--IIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAV 206
V C G + + SDD + K+W+ + C+ T + + +HP +
Sbjct: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIIT 246
Query: 207 ATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
+ G V+++ T+ L + E V + S ++ +G + +
Sbjct: 247 GSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMV 297
Score = 37.5 bits (83), Expect = 0.042
Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Query: 17 LKGHKNAITAL-YYNPNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
L H+ + + Y+ D+ + T S D++ +WD + GH V V F
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE 240
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVV 129
+ + S D TVRIW T + V ++ + +++ D+ +
Sbjct: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 86.6 bits (205), Expect = 7e-17
Identities = 58/250 (23%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
+K++ + ++ +P + I S +V +W+ + + F+ + V F
Sbjct: 7 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFI 66
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
+++ + + D +R++ +F+AHS +R V ++++SDD ++KLW
Sbjct: 67 PRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 133 STHKHKFISS-FVGHTNWV-RCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
+ F GH+++V + D + AS S D++ K+WNL S + T D
Sbjct: 127 DWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
Query: 191 HGLHLAWHPSG---CYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYIL 247
G++ + +G Y+ + K++D +T + VQ H V+ V HP I+
Sbjct: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIII 245
Query: 248 TASKDGKMKI 257
T S+DG ++I
Sbjct: 246 TGSEDGTVRI 255
Score = 80.2 bits (189), Expect = 6e-15
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 4/247 (1%)
Query: 58 RFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
+F E V V + ++ ++ TV IW T F+ VRS +F
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRK 69
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
++ +DD +++++ + + F H++++RC + + S SDD KLW+ +
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 178 SG-ECIHTYKDLKGHGLHLAWHPSGCYV-AVATSHGNVKLYDIRTHNLVQYYSIHNEAVT 235
+G C ++ + + + ++P A A+ +K++++ + + H + V
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
Query: 236 QVAIHPSGS--YILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGD 293
V G Y++T S D K+ D + TL GH V+AV F P + +
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSE 249
Query: 294 DKLVFIW 300
D V IW
Sbjct: 250 DGTVRIW 256
Score = 77.4 bits (182), Expect = 4e-14
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLR-GTMRSYRFQGHDEAVMDVTFSS 73
K + H + I + +P + +SS D + LWD G + F+GH VM V F+
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 74 SG-KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK--IITASDDKVVK 130
ASAS D+T++IW AH + V V + + G K +IT SDD K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Query: 131 LWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
+W + + GHT+ V + II + S+D + ++W+ + + ++
Sbjct: 213 VWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT----YRLENTLN 268
Query: 191 HGLHLAW 197
+GL W
Sbjct: 269 YGLERVW 275
Score = 64.5 bits (150), Expect = 3e-10
Identities = 45/231 (19%), Positives = 94/231 (40%), Gaps = 4/231 (1%)
Query: 31 PNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW 90
P Q + + D + +++ + F+ H + + V + Y+ S+S D +++W
Sbjct: 67 PRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 91 V-PTVTGSTGMFKAHSQTVRSVQFS-SDGSKIITASDDKVVKLWSTHKHKFISSFVGHTN 148
T +F+ HS V V F+ D + +AS D+ +K+W+ + H
Sbjct: 127 DWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
Query: 149 WVRCARMSNDGS--IIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAV 206
V C G + + SDD + K+W+ + C+ T + + +HP +
Sbjct: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIIT 246
Query: 207 ATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
+ G V+++ T+ L + E V + S ++ +G + +
Sbjct: 247 GSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMV 297
Score = 37.5 bits (83), Expect = 0.042
Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Query: 17 LKGHKNAITAL-YYNPNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
L H+ + + Y+ D+ + T S D++ +WD + GH V V F
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE 240
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVV 129
+ + S D TVRIW T + V ++ + +++ D+ +
Sbjct: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 86.6 bits (205), Expect = 7e-17
Identities = 58/250 (23%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
+K++ + ++ +P + I S +V +W+ + + F+ + V F
Sbjct: 7 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFI 66
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
+++ + + D +R++ +F+AHS +R V ++++SDD ++KLW
Sbjct: 67 PRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 133 STHKHKFISS-FVGHTNWV-RCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
+ F GH+++V + D + AS S D++ K+WNL S + T D
Sbjct: 127 DWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
Query: 191 HGLHLAWHPSG---CYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYIL 247
G++ + +G Y+ + K++D +T + VQ H V+ V HP I+
Sbjct: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIII 245
Query: 248 TASKDGKMKI 257
T S+DG ++I
Sbjct: 246 TGSEDGTVRI 255
Score = 80.2 bits (189), Expect = 6e-15
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 4/247 (1%)
Query: 58 RFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
+F E V V + ++ ++ TV IW T F+ VRS +F
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRK 69
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
++ +DD +++++ + + F H++++RC + + S SDD KLW+ +
Sbjct: 70 QWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 178 SG-ECIHTYKDLKGHGLHLAWHPSGCYV-AVATSHGNVKLYDIRTHNLVQYYSIHNEAVT 235
+G C ++ + + + ++P A A+ +K++++ + + H + V
Sbjct: 130 NGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
Query: 236 QVAIHPSGS--YILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGD 293
V G Y++T S D K+ D + TL GH V+AV F P + +
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSE 249
Query: 294 DKLVFIW 300
D V IW
Sbjct: 250 DGTVRIW 256
Score = 77.4 bits (182), Expect = 4e-14
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLR-GTMRSYRFQGHDEAVMDVTFSS 73
K + H + I + +P + +SS D + LWD G + F+GH VM V F+
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNP 152
Query: 74 SG-KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK--IITASDDKVVK 130
ASAS D+T++IW AH + V V + + G K +IT SDD K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Query: 131 LWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
+W + + GHT+ V + II + S+D + ++W+ + + ++
Sbjct: 213 VWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT----YRLENTLN 268
Query: 191 HGLHLAW 197
+GL W
Sbjct: 269 YGLERVW 275
Score = 64.5 bits (150), Expect = 3e-10
Identities = 45/231 (19%), Positives = 94/231 (40%), Gaps = 4/231 (1%)
Query: 31 PNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW 90
P Q + + D + +++ + F+ H + + V + Y+ S+S D +++W
Sbjct: 67 PRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 91 V-PTVTGSTGMFKAHSQTVRSVQFS-SDGSKIITASDDKVVKLWSTHKHKFISSFVGHTN 148
T +F+ HS V V F+ D + +AS D+ +K+W+ + H
Sbjct: 127 DWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQK 186
Query: 149 WVRCARMSNDGS--IIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAV 206
V C G + + SDD + K+W+ + C+ T + + +HP +
Sbjct: 187 GVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIIT 246
Query: 207 ATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
+ G V+++ T+ L + E V + S ++ +G + +
Sbjct: 247 GSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMV 297
Score = 37.5 bits (83), Expect = 0.042
Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Query: 17 LKGHKNAITAL-YYNPNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
L H+ + + Y+ D+ + T S D++ +WD + GH V V F
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE 240
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVV 129
+ + S D TVRIW T + V ++ + +++ D+ +
Sbjct: 241 LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 86.6 bits (205), Expect = 7e-17
Identities = 57/250 (22%), Positives = 116/250 (46%), Gaps = 6/250 (2%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
+K++ + ++ +P + I S ++ +W+ + F + V F
Sbjct: 7 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFI 66
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
+ +++ + + D +R++ +F+AH+ +R V ++++SDD ++KLW
Sbjct: 67 ARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 133 STHKHKFISS-FVGHTNWVRCARMS-NDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
K + F GH+++V + D + AS S D++ K+WNL S + T D
Sbjct: 127 DWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHL 185
Query: 191 HGLHLAWHPSG---CYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYIL 247
G++ + +G Y+ + K++D +T + VQ H V+ V+ HP I+
Sbjct: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIII 245
Query: 248 TASKDGKMKI 257
T S+DG ++I
Sbjct: 246 TGSEDGTVRI 255
Score = 77.0 bits (181), Expect = 6e-14
Identities = 60/273 (21%), Positives = 113/273 (41%), Gaps = 6/273 (2%)
Query: 58 RFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
+F E V V + ++ ++ T+ IW F VRS +F +
Sbjct: 10 KFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARK 69
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
++ +DD +++++ + I F H +++RC + + S SDD KLW+ +
Sbjct: 70 QWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
Query: 178 SG-ECIHTYKDLKGHGLHLAWHPSGCYV-AVATSHGNVKLYDIRTHNLVQYYSIHNEAVT 235
G C ++ + + + ++P A A+ +K++++ + + H + V
Sbjct: 130 KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVN 189
Query: 236 QVAIHPSGS--YILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGD 293
V G Y++T S D K+ D + TL GH V+AV+F P + +
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSE 249
Query: 294 DKLVFIWKTNFTDLSSESKENEGQNMITGQRHL 326
D V IW + T E+ N G + H+
Sbjct: 250 DGTVRIW--HATTYRLENTLNYGLERVWAIGHI 280
Score = 36.3 bits (80), Expect = 0.098
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 17 LKGHKNAITAL-YYNPNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
L H + + Y+ D+ + T S D++ +WD + +GH V V+F
Sbjct: 181 LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE 240
Query: 75 GKYMASASRDKTVRIWVPT 93
+ + S D TVRIW T
Sbjct: 241 LPIIITGSEDGTVRIWHAT 259
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 85.0 bits (201), Expect = 2e-16
Identities = 40/129 (31%), Positives = 67/129 (51%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA 79
HK A+TAL YN +A+ S DN ++LWD+ G +R +GH + V D+ F GK +
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 80 SASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKF 139
S+S+DK +R+W + H V SV + ++T S D+ ++ ++ ++
Sbjct: 165 SSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKEYSS 224
Query: 140 ISSFVGHTN 148
S V +N
Sbjct: 225 NGSLVSDSN 233
Score = 74.5 bits (175), Expect = 3e-13
Identities = 39/152 (25%), Positives = 74/152 (48%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASR 83
+ A+ +P+ + IA + LD++V ++ + GH VM + SS G+ + + S+
Sbjct: 543 VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQ 602
Query: 84 DKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSF 143
DK ++IW AH +V V+F + + + D++VK W K + + +
Sbjct: 603 DKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTL 662
Query: 144 VGHTNWVRCARMSNDGSIIASCSDDKSTKLWN 175
GH + C +SN G + + S D+S + W+
Sbjct: 663 EGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 65.7 bits (153), Expect = 1e-10
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 7/163 (4%)
Query: 108 VRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSD 167
V +V S D I A D VK++ KF S GH V C +S+DG +I + S
Sbjct: 543 VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQ 602
Query: 168 DKSTKLWNLDSGECIHTYKDLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLV 224
DK+ K+W LD G+C +K + HG + + + + Y+ VK +D +
Sbjct: 603 DKNLKIWGLDFGDC---HKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHL 659
Query: 225 QYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIF 267
H+ + +AI G +++T S D M+ D E P F
Sbjct: 660 LTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSE-EPFF 701
Score = 62.5 bits (145), Expect = 1e-09
Identities = 52/246 (21%), Positives = 106/246 (43%), Gaps = 5/246 (2%)
Query: 101 FKAHSQTVRSVQFSSDGSKIITASDDKV----VKLWSTHKHKFISSFVGHTNWVRCARMS 156
F S ++ + S G ++ + +KV V+ K SS G + + S
Sbjct: 14 FGVISSVDSNIAYDSTGKYVLAPALEKVGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIAS 73
Query: 157 NDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLY 216
+ S++A D S ++W+ + G C + KG L ++ G +A + ++ L+
Sbjct: 74 SASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILW 133
Query: 217 DIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPV 276
D+ + + H + VT + G ++++SKD +++ DL H + +SGH+ V
Sbjct: 134 DVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEV 193
Query: 277 NAVNFSPTGD-TFSSAGDDKLVFIWKTNFTDLSSESKENEGQNMITGQRHLTEEGIDTIT 335
+V+ P + + D +L F ++ S ++ + + H TE + +
Sbjct: 194 WSVDTDPEERYVVTGSADQELRFYAVKEYSSNGSLVSDSNANEIKASEEHSTENKWEILK 253
Query: 336 ENGQIQ 341
G+IQ
Sbjct: 254 LFGEIQ 259
Score = 62.5 bits (145), Expect = 1e-09
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 36 IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVT 95
+A D S+ +WD F H AV + ++ G +AS S+D + +W V
Sbjct: 79 VAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILW--DVV 136
Query: 96 GSTGMFK--AHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCA 153
G +G+F+ H V + F G K++++S DK +++W + GH + V
Sbjct: 137 GESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSV 196
Query: 154 RMSNDGSIIASCSDDKSTKLW 174
+ + + S D+ + +
Sbjct: 197 DTDPEERYVVTGSADQELRFY 217
Score = 62.5 bits (145), Expect = 1e-09
Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 14/188 (7%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRG-----------TMRSYRFQGHD 63
+++K H I ++ PND T S D+ V W+ + T+ + + +
Sbjct: 481 EEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMN 540
Query: 64 EAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITA 123
+ V+ V S K++A A D TV+++ H V + SSDG I+T
Sbjct: 541 DDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTG 600
Query: 124 SDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIH 183
S DK +K+W S H + V + + + S D+ K W+ D E +
Sbjct: 601 SQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLL 660
Query: 184 TYKDLKGH 191
T L+GH
Sbjct: 661 T---LEGH 665
Score = 54.4 bits (125), Expect = 3e-07
Identities = 33/152 (21%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Query: 72 SSSGKYMASASRDKTVRIWVPTVTGSTGM-FKAHSQTVRSVQFSSDGSKIITASDDKVVK 130
SS+ +A D ++RIW T G+ + F +H V +++++ GS + + S D +
Sbjct: 73 SSASSLVAVGYADGSIRIW-DTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDII 131
Query: 131 LWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
LW + GH + V + G + S S DK ++W+L++ C+
Sbjct: 132 LWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHS 191
Query: 191 HGLHLAWHPSGCYVAVATSHGNVKLYDIRTHN 222
+ P YV ++ ++ Y ++ ++
Sbjct: 192 EVWSVDTDPEERYVVTGSADQELRFYAVKEYS 223
Score = 54.0 bits (124), Expect = 5e-07
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 145 GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYV 204
GH + VR +S D +++ S S + K+WN +G C+ T G+GL P Y
Sbjct: 404 GHRSDVRSVTLSEDNTLLMSTSHSE-VKIWNPSTGSCLRTID--SGYGLCSLIVPQNKYG 460
Query: 205 AVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMK 256
V T G +++ DI + V+ H + + P+ S +T S D ++K
Sbjct: 461 IVGTKSGVLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVK 512
Score = 48.8 bits (111), Expect = 2e-05
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 11/210 (5%)
Query: 102 KAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTH-KHKFISSFVGHT-NWVRCARMSNDG 159
KAH T+ S+ + S +T S D VK W K K + T + V+ +M++D
Sbjct: 484 KAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDDV 543
Query: 160 SIIASCSDDKSTKLWNLDSG------ECIHTYKDLKGHGLHLAW---HPSGCYVAVATSH 210
+A D K + LDS + + Y L GH L + G + +
Sbjct: 544 LAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQD 603
Query: 211 GNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLS 270
N+K++ + + + H ++V V + Y+ + KD +K D + + TL
Sbjct: 604 KNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLE 663
Query: 271 GHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
GH+ + + S GD + D+ + W
Sbjct: 664 GHHAEIWCLAISNRGDFLVTGSHDRSMRRW 693
Score = 43.2 bits (97), Expect = 9e-04
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 16 QLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSG 75
+L+GH++ +T L + +++ +SS D + +WDL GH V V
Sbjct: 143 RLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEE 202
Query: 76 KYMASASRDKTVRIWVPTVTGSTGMFKAHS 105
+Y+ + S D+ +R + S G + S
Sbjct: 203 RYVVTGSADQELRFYAVKEYSSNGSLVSDS 232
Score = 42.7 bits (96), Expect = 0.001
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 26/222 (11%)
Query: 102 KAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSI 161
+ H VRSV S D + +++ S +V K+W+ + + N I
Sbjct: 403 QGHRSDVRSVTLSEDNTLLMSTSHSEV-KIWNPSTGSCLRTIDSGYGLCSLIVPQNKYGI 461
Query: 162 IASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAW------HPSGCYVAVATSHGNVKL 215
+ + KS L +D G +++K HG + W + SG +V V+ H VK
Sbjct: 462 VGT----KSGVLEIIDIGSATKV-EEVKAHGGTI-WSITPIPNDSG-FVTVSADH-EVKF 513
Query: 216 YDIR--------THNLV--QYYSIH-NEAVTQVAIHPSGSYILTASKDGKMKILDLLEGH 264
++ + T L S+ N+ V VAI P +I A D +K+ +
Sbjct: 514 WEYQVKQKSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLK 573
Query: 265 PIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTD 306
+L GH PV ++ S G+ + DK + IW +F D
Sbjct: 574 FYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGD 615
Score = 34.7 bits (76), Expect = 0.30
Identities = 15/76 (19%), Positives = 33/76 (43%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
K + H +++ + + N + + D V WD +GH + + S+
Sbjct: 618 KSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNR 677
Query: 75 GKYMASASRDKTVRIW 90
G ++ + S D+++R W
Sbjct: 678 GDFLVTGSHDRSMRRW 693
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 81.0 bits (191), Expect = 3e-15
Identities = 80/314 (25%), Positives = 139/314 (44%), Gaps = 42/314 (13%)
Query: 58 RFQGHDEAVMDVTFSSSGKY-------MASASRDKTVRIWVPTV-----TGSTGMFKAHS 105
+ +GH + V V ++ + +AS S D TVRIW + T T + + H+
Sbjct: 15 KLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHT 74
Query: 106 QTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKF--ISSFVGHTNWVRCARMSNDGSIIA 163
+TVRS +S G + TAS D +W + +F IS+ GH N V+ + GS +A
Sbjct: 75 RTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLA 134
Query: 164 SCSDDKSTKLWNLDSGECIHTYKDLKGHGLH---LAWHPSGCYVAVATSHGNVKLY---- 216
+CS DKS +W + G L GH + WHP+ + + +K++
Sbjct: 135 TCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSED 194
Query: 217 DIRTHNLVQYY----SIHNEAVTQVAIHPSGSYILTASKDGKMKI--LDLL------EGH 264
D + VQ + H+ V ++ + +G ++T S D +KI D+ E
Sbjct: 195 DDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYA 254
Query: 265 P---IFTLSG-HNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEGQNMI 320
P + TLSG H+ + + ++S S AGD+ + F D +S + N++
Sbjct: 255 PWIHLCTLSGYHDRTIYSAHWSRDDIIASGAGDNAIRL-----FVDSKHDSVDGPSYNLL 309
Query: 321 TGQRHLTEEGIDTI 334
+ E ++++
Sbjct: 310 LKKNKAHENDVNSV 323
Score = 74.1 bits (174), Expect = 4e-13
Identities = 82/335 (24%), Positives = 147/335 (43%), Gaps = 49/335 (14%)
Query: 15 KQLKGHKNAITALYYNPNDQQ-------IATSSLDNSVLLWDLRGTMRSYRF-----QGH 62
++L+GH + + ++ +NP +A+ S DN+V +W+ RS+ + H
Sbjct: 14 QKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETH 73
Query: 63 DEAVMDVTFSSSGKYMASASRDKTVRIW--VPTVTGSTGMFKAHSQTVRSVQFSSDGSKI 120
V +S SG+ +A+AS D T IW + + H V+SV +++ GS +
Sbjct: 74 TRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCL 133
Query: 121 ITASDDKVVKLWST---HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLW--N 175
T S DK V +W +++ + GHT V+ + ++ SCS D + K+W
Sbjct: 134 ATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSE 193
Query: 176 LDSGE--CIHTY-KDLKGHG---LHLAWHPSGCYVAVATSHGNVKLY--DIRTHNLVQYY 227
D GE C+ T + GH ++++ +G + + +K++ DI + Y
Sbjct: 194 DDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEY 253
Query: 228 SIHNEAVTQVAIHPSGSY---------ILTASKDGKMKIL-----DLLEGHPIFTL---- 269
+ T H Y I + + D +++ D ++G P + L
Sbjct: 254 APWIHLCTLSGYHDRTIYSAHWSRDDIIASGAGDNAIRLFVDSKHDSVDG-PSYNLLLKK 312
Query: 270 -SGHNGPVNAVNFSP-TGD-TFSSAGDDKLVFIWK 301
H VN+V +SP G+ +SA DD +V IW+
Sbjct: 313 NKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQ 347
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 80.2 bits (189), Expect = 6e-15
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 104 HSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISS---FVGHTNWVRCARMSNDGS 160
HS+ V S++F D ++TAS DK V++W + +S H+ VR +
Sbjct: 263 HSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNK 322
Query: 161 IIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHL---AWHPSGCYVAVATSHGNVKLYD 217
S S D + ++L SG C+ D + ++ A+HP G + T+ VK++D
Sbjct: 323 YFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVKIWD 382
Query: 218 IRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVN 277
+++ V + HN +T ++ +G ++ TA+ DG +++ DL + T + N
Sbjct: 383 VKSQANVAKFGGHNGEITSISFSENGYFLATAALDG-VRLWDLRKLKNFRTFDFPD--AN 439
Query: 278 AVNFSPTGDTFSSAGDDKLVF 298
+V F +G A D VF
Sbjct: 440 SVEFDHSGSYLGIAASDIRVF 460
Score = 64.5 bits (150), Expect = 3e-10
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 9/241 (3%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKY 77
K +K I ++ + IAT +D + +L+D GH + V + F
Sbjct: 219 KTNKPGIFSMDILHSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDL 278
Query: 78 MASASRDKTVRIWVPTVTG---STGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
+ +AS DKTVRIW + G S K HS VR+V + ++AS D +
Sbjct: 279 VLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDL 338
Query: 135 HKHKFISSFV-GHTNWVR--CARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGH 191
++ N V A DG I+ + + K+W++ S + + G
Sbjct: 339 SSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGE 398
Query: 192 GLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASK 251
+++ +G ++A A G V+L+D+R L + + V SGSY+ A+
Sbjct: 399 ITSISFSENGYFLATAALDG-VRLWDLR--KLKNFRTFDFPDANSVEFDHSGSYLGIAAS 455
Query: 252 D 252
D
Sbjct: 456 D 456
Score = 62.9 bits (146), Expect = 1e-09
Identities = 50/214 (23%), Positives = 84/214 (39%), Gaps = 7/214 (3%)
Query: 93 TVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRC 152
T S + K + + S+ I T D L+ + +S+ GH+ V
Sbjct: 210 TQLSSHPLHKTNKPGIFSMDILHSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTS 269
Query: 153 ARMSNDGSIIASCSDDKSTKLWNL-DSGECI--HTYKDLKGHGLHLAWHPSGCYVAVATS 209
+ D ++ + S DK+ ++W + G HT KD + H + Y A+
Sbjct: 270 IKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASL 329
Query: 210 HGNVKLYDIRTH-NLVQYYSIHNEAV--TQVAIHPSGSYILTASKDGKMKILDLLEGHPI 266
YD+ + L Q V T A HP G + T + +KI D+ +
Sbjct: 330 DSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANV 389
Query: 267 FTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
GHNG + +++FS G ++A D V +W
Sbjct: 390 AKFGGHNGEITSISFSENGYFLATAALDG-VRLW 422
Score = 59.7 bits (138), Expect = 9e-09
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 9/207 (4%)
Query: 9 PEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLR--GTMRS-YRFQGHDEA 65
P + L GH +T++ + + + T+S D +V +W G S + + H
Sbjct: 252 PSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAE 311
Query: 66 VMDVTFSSSGKYMASASRDKTVRIW-VPTVTGSTGMFKAHSQTVR--SVQFSSDGSKIIT 122
V VT ++ KY SAS D T + + + + A V + F DG + T
Sbjct: 312 VRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGT 371
Query: 123 ASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECI 182
+ +VK+W ++ F GH + S +G +A+ + D +LW+L +
Sbjct: 372 GTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD-GVRLWDLRKLKNF 430
Query: 183 HTYKDLKGHGLHLAWHPSGCYVAVATS 209
T+ + + + SG Y+ +A S
Sbjct: 431 RTFDFPDANSVE--FDHSGSYLGIAAS 455
Score = 50.8 bits (116), Expect = 4e-06
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 11/172 (6%)
Query: 12 CLKKQLKGHKNAI--TALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDV 69
CL + +N + TA ++P+ + T + + V +WD++ +F GH+ + +
Sbjct: 343 CLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSI 402
Query: 70 TFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKI-ITASDDKV 128
+FS +G ++A+A+ D VR+W + F SV+F GS + I ASD +V
Sbjct: 403 SFSENGYFLATAALD-GVRLWDLRKLKNFRTF--DFPDANSVEFDHSGSYLGIAASDIRV 459
Query: 129 VKLWSTHKH----KFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNL 176
+ S K + G T + D IA S D++ +++ L
Sbjct: 460 FQAASVKAEWNPIKTLPDLSG-TGKATSVKFGLDSKYIAVGSMDRNLRIFGL 510
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 79.0 bits (186), Expect = 1e-14
Identities = 85/318 (26%), Positives = 133/318 (41%), Gaps = 35/318 (11%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQ----IATSSLDNSVLLW--DLRGTMRSYRFQGHDEAV 66
LK H++++ A + P + + T SLD +V LW D +R+ GH V
Sbjct: 6 LKSIENAHEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNT--GHSLGV 63
Query: 67 MDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDD 126
+ SG AS+S D VR++ + + +A V +QF G+ + A
Sbjct: 64 AALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGS 123
Query: 127 KV-VKLWSTHKHKFISSF-------------VGHTNWVRCARMSNDGSIIASCSDDKSTK 172
VKLW T + IS+ +V S +G +A S D +
Sbjct: 124 SASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTIC 183
Query: 173 LWNLDSGECIHTYKDLKGHGL---HLAWHPSGCYVAVATSH-GNVKLYDIRTHNLVQYYS 228
++++D + +H L+GH + L + P V + S G+V ++D L+ S
Sbjct: 184 VFDVDRSKLLH---QLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMS 240
Query: 229 IHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDT- 287
H V V P G I T S D +++ DL I T+S HN V +V F P G T
Sbjct: 241 GHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTG 300
Query: 288 -----FSSAGDDKLVFIW 300
+S DDK V ++
Sbjct: 301 VRAGRLASVSDDKSVSLY 318
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 78.6 bits (185), Expect = 2e-14
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 8/200 (4%)
Query: 104 HSQTVRSVQFSSDGSKIITASDDKVVKLW-STHKHKFISSFV--GHTNWVRCARMSNDGS 160
HS+ V SV+F D ++TAS DK V++W + + + H+ VR +
Sbjct: 263 HSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNK 322
Query: 161 IIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLA--WHPSGCYVAVATSHGNVKLYDI 218
S S D + ++L SG C+ D + + A +HP G + TS VK++D+
Sbjct: 323 YFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDV 382
Query: 219 RTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNA 278
++ V + H VT ++ +G ++ TA++DG +++ DL + S + N+
Sbjct: 383 KSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRNF--KSFLSADANS 439
Query: 279 VNFSPTGDTFSSAGDDKLVF 298
V F P+G A D V+
Sbjct: 440 VEFDPSGSYLGIAASDIKVY 459
Score = 75.4 bits (177), Expect = 2e-13
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 12/214 (5%)
Query: 9 PEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMR---SYRFQGHDEA 65
P + L GH +T++ + + + T+S D +V +W G Y H
Sbjct: 252 PSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAE 311
Query: 66 VMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTV--RSVQFSSDGSKIITA 123
V VT + KY SAS D T + + S+ V + F DG + T
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTG 371
Query: 124 SDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIH 183
+ VVK+W ++ F GHT V S +G +A+ ++D +LW+L +
Sbjct: 372 TSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRLWDLRK---LR 427
Query: 184 TYKD-LKGHGLHLAWHPSGCYVAVATSHGNVKLY 216
+K L + + PSG Y+ +A S ++K+Y
Sbjct: 428 NFKSFLSADANSVEFDPSGSYLGIAAS--DIKVY 459
Score = 74.5 bits (175), Expect = 3e-13
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 6/213 (2%)
Query: 93 TVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRC 152
T S + K + + S+ I T D L+ + +S+ GH+ V
Sbjct: 210 TQLSSHPLHKTNKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTS 269
Query: 153 ARMSNDGSIIASCSDDKSTKLW-NLDSGE--CIHTYKDLKGHGLHLAWHPSGCYVAVATS 209
+ D ++ + S DK+ ++W N G C +T D + HP+ Y A+
Sbjct: 270 VKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASL 329
Query: 210 HGNVKLYDIRTHNLVQYYSIHNEAV--TQVAIHPSGSYILTASKDGKMKILDLLEGHPIF 267
G YD+ + + + S ++ V T A HP G + T + +KI D+ +
Sbjct: 330 DGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVA 389
Query: 268 TLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
GH G V A++FS G ++A +D V +W
Sbjct: 390 KFDGHTGEVTAISFSENGYFLATAAEDG-VRLW 421
Score = 69.3 bits (162), Expect = 1e-11
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 8/243 (3%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKY 77
K +K I ++ + IAT +D + +L+D GH + V V F
Sbjct: 219 KTNKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDL 278
Query: 78 MASASRDKTVRIWVPTVTGSTG---MFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
+ +AS DKTVRIW G+ HS VR+V ++AS D +
Sbjct: 279 VLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDL 338
Query: 135 HKHKFISSFVGHTNWV--RCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHG 192
++ + V A DG I+ + + K+W++ S + + G
Sbjct: 339 SSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEV 398
Query: 193 LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKD 252
+++ +G ++A A G V+L+D+R L + S + V PSGSY+ A+ D
Sbjct: 399 TAISFSENGYFLATAAEDG-VRLWDLR--KLRNFKSFLSADANSVEFDPSGSYLGIAASD 455
Query: 253 GKM 255
K+
Sbjct: 456 IKV 458
Score = 56.8 bits (131), Expect = 6e-08
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 12 CLKKQLKGHKNA-ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT 70
CL + KN TA ++P+ + T + + V +WD++ +F GH V ++
Sbjct: 343 CLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAIS 402
Query: 71 FSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKI-ITASDDKVV 129
FS +G ++A+A+ D VR+W + F S SV+F GS + I ASD KV
Sbjct: 403 FSENGYFLATAAED-GVRLWDLRKLRNFKSFL--SADANSVEFDPSGSYLGIAASDIKVY 459
Query: 130 KLWSTH-KHKFISSF--VGHTNWVRCARMSNDGSIIASCSDDKS 170
+ S + I + + T C + +D +A S D++
Sbjct: 460 QTASVKAEWNLIKTLPDLSGTGKATCVKFGSDAQYVAVGSMDRN 503
Score = 36.7 bits (81), Expect = 0.074
Identities = 21/75 (28%), Positives = 32/75 (42%)
Query: 227 YSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGD 286
+ + + + I S I T D + D G + TL+GH+ V +V F D
Sbjct: 218 HKTNKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSD 277
Query: 287 TFSSAGDDKLVFIWK 301
+A DK V IW+
Sbjct: 278 LVLTASADKTVRIWR 292
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 78.6 bits (185), Expect = 2e-14
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 8/200 (4%)
Query: 104 HSQTVRSVQFSSDGSKIITASDDKVVKLW-STHKHKFISSFV--GHTNWVRCARMSNDGS 160
HS+ V SV+F D ++TAS DK V++W + + + H+ VR +
Sbjct: 263 HSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNK 322
Query: 161 IIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLA--WHPSGCYVAVATSHGNVKLYDI 218
S S D + ++L SG C+ D + + A +HP G + TS VK++D+
Sbjct: 323 YFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDV 382
Query: 219 RTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNA 278
++ V + H VT ++ +G ++ TA++DG +++ DL + S + N+
Sbjct: 383 KSQANVAKFDGHTGEVTAISFSENGYFLATAAEDG-VRLWDLRKLRNF--KSFLSADANS 439
Query: 279 VNFSPTGDTFSSAGDDKLVF 298
V F P+G A D V+
Sbjct: 440 VEFDPSGSYLGIAASDIKVY 459
Score = 75.4 bits (177), Expect = 2e-13
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 12/214 (5%)
Query: 9 PEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMR---SYRFQGHDEA 65
P + L GH +T++ + + + T+S D +V +W G Y H
Sbjct: 252 PSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAE 311
Query: 66 VMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTV--RSVQFSSDGSKIITA 123
V VT + KY SAS D T + + S+ V + F DG + T
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTG 371
Query: 124 SDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIH 183
+ VVK+W ++ F GHT V S +G +A+ ++D +LW+L +
Sbjct: 372 TSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRLWDLRK---LR 427
Query: 184 TYKD-LKGHGLHLAWHPSGCYVAVATSHGNVKLY 216
+K L + + PSG Y+ +A S ++K+Y
Sbjct: 428 NFKSFLSADANSVEFDPSGSYLGIAAS--DIKVY 459
Score = 74.5 bits (175), Expect = 3e-13
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 6/213 (2%)
Query: 93 TVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRC 152
T S + K + + S+ I T D L+ + +S+ GH+ V
Sbjct: 210 TQLSSHPLHKTNKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTS 269
Query: 153 ARMSNDGSIIASCSDDKSTKLW-NLDSGE--CIHTYKDLKGHGLHLAWHPSGCYVAVATS 209
+ D ++ + S DK+ ++W N G C +T D + HP+ Y A+
Sbjct: 270 VKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASL 329
Query: 210 HGNVKLYDIRTHNLVQYYSIHNEAV--TQVAIHPSGSYILTASKDGKMKILDLLEGHPIF 267
G YD+ + + + S ++ V T A HP G + T + +KI D+ +
Sbjct: 330 DGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVA 389
Query: 268 TLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
GH G V A++FS G ++A +D V +W
Sbjct: 390 KFDGHTGEVTAISFSENGYFLATAAEDG-VRLW 421
Score = 69.3 bits (162), Expect = 1e-11
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 8/243 (3%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKY 77
K +K I ++ + IAT +D + +L+D GH + V V F
Sbjct: 219 KTNKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDL 278
Query: 78 MASASRDKTVRIWVPTVTGSTG---MFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
+ +AS DKTVRIW G+ HS VR+V ++AS D +
Sbjct: 279 VLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDL 338
Query: 135 HKHKFISSFVGHTNWV--RCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHG 192
++ + V A DG I+ + + K+W++ S + + G
Sbjct: 339 SSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEV 398
Query: 193 LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKD 252
+++ +G ++A A G V+L+D+R L + S + V PSGSY+ A+ D
Sbjct: 399 TAISFSENGYFLATAAEDG-VRLWDLR--KLRNFKSFLSADANSVEFDPSGSYLGIAASD 455
Query: 253 GKM 255
K+
Sbjct: 456 IKV 458
Score = 56.8 bits (131), Expect = 6e-08
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 12 CLKKQLKGHKNA-ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT 70
CL + KN TA ++P+ + T + + V +WD++ +F GH V ++
Sbjct: 343 CLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAIS 402
Query: 71 FSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKI-ITASDDKVV 129
FS +G ++A+A+ D VR+W + F S SV+F GS + I ASD KV
Sbjct: 403 FSENGYFLATAAED-GVRLWDLRKLRNFKSFL--SADANSVEFDPSGSYLGIAASDIKVY 459
Query: 130 KLWSTH-KHKFISSF--VGHTNWVRCARMSNDGSIIASCSDDKS 170
+ S + I + + T C + +D +A S D++
Sbjct: 460 QTASVKAEWNLIKTLPDLSGTGKATCVKFGSDAQYVAVGSMDRN 503
Score = 36.7 bits (81), Expect = 0.074
Identities = 21/75 (28%), Positives = 32/75 (42%)
Query: 227 YSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGD 286
+ + + + I S I T D + D G + TL+GH+ V +V F D
Sbjct: 218 HKTNKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSD 277
Query: 287 TFSSAGDDKLVFIWK 301
+A DK V IW+
Sbjct: 278 LVLTASADKTVRIWR 292
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 78.6 bits (185), Expect = 2e-14
Identities = 60/235 (25%), Positives = 114/235 (48%), Gaps = 14/235 (5%)
Query: 45 VLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGM-FKA 103
+L+WD R + QGH V VT+S + +A+ + D V++W ++G+ + F
Sbjct: 331 LLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVW-NVMSGTCFITFTE 389
Query: 104 HSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHT--NWVRCARMSNDGSI 161
H+ V ++ F +D +++AS D V+ W ++K ++ T +V + +
Sbjct: 390 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVV 449
Query: 162 IASCSDDKSTKLWNLDSGECIHTYKD-LKGHG--LH-LAWHPSGCYVAVATSHGNVKLYD 217
A D +W+ +G+ KD L GH +H L + P +A ++ V+L+D
Sbjct: 450 CAGTLDSFEIFVWSKKTGQI----KDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWD 505
Query: 218 I-RTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSG 271
+ + V+ + HN V VA P G + +++ DG++ D +EG ++T+ G
Sbjct: 506 VFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 559
Score = 66.9 bits (156), Expect = 6e-11
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 2/172 (1%)
Query: 131 LWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
+W +I GH V C S D ++A+ +DD K+WN+ SG C T+ +
Sbjct: 333 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTN 392
Query: 191 HGLHLAWHPSGCYVAVATSHGNVKLYDIRTH-NLVQYYSIHNEAVTQVAIHPSGSYILTA 249
L + + A+ G V+ +D + + N Y + + PSG +
Sbjct: 393 AVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAG 452
Query: 250 SKDG-KMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ D ++ + G LSGH PV+ + FSP +S+ D V +W
Sbjct: 453 TLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLW 504
Score = 62.9 bits (146), Expect = 1e-09
Identities = 48/203 (23%), Positives = 77/203 (37%), Gaps = 2/203 (0%)
Query: 102 KAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSI 161
+ H V V +S D + T +DD VK+W+ +F HTN V D
Sbjct: 346 QGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHS 405
Query: 162 IASCSDDKSTKLWNLDSGECIHTYKD-LKGHGLHLAWHPSGCYVAVATSHG-NVKLYDIR 219
+ S S D + + W+ + TY + L PSG V T + ++ +
Sbjct: 406 LLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKK 465
Query: 220 THNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV 279
T + S H V + P + ++S D +++ D+ HN V V
Sbjct: 466 TGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTV 525
Query: 280 NFSPTGDTFSSAGDDKLVFIWKT 302
F P G +S+ D + W T
Sbjct: 526 AFRPDGKQLASSTLDGQINFWDT 548
Score = 61.3 bits (142), Expect = 3e-09
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 8/209 (3%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
LK+Q GH + + Y+P+ Q +AT + DN V +W++ F H AV + F
Sbjct: 343 LKQQ--GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFM 400
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS---DDKVV 129
+ + SAS D TVR W + + + + V ++D S + + D +
Sbjct: 401 ADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPR-QFVSLTADPSGDVVCAGTLDSFEI 459
Query: 130 KLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGE-CIHTYKDL 188
+WS + GH V S ++AS S D + +LW++ + + + T++
Sbjct: 460 FVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRH- 518
Query: 189 KGHGLHLAWHPSGCYVAVATSHGNVKLYD 217
L +A+ P G +A +T G + +D
Sbjct: 519 NHDVLTVAFRPDGKQLASSTLDGQINFWD 547
Score = 54.8 bits (126), Expect = 3e-07
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDL---RGTMRSYRFQGHDEAVMDV 69
+K L GH+ + L ++P Q +A+SS D +V LWD+ +GT+ ++R H+ V+ V
Sbjct: 469 IKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFR---HNHDVLTV 525
Query: 70 TFSSSGKYMASASRDKTVRIWVPTVTG 96
F GK +AS++ D + W T+ G
Sbjct: 526 AFRPDGKQLASSTLDGQINFW-DTIEG 551
Score = 53.2 bits (122), Expect = 8e-07
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 26 ALYYNPNDQQIATSSLDN-SVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRD 84
+L +P+ + +LD+ + +W + GH+ V + FS + +AS+S D
Sbjct: 439 SLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWD 498
Query: 85 KTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSF 143
TVR+W V G+ F+ H+ V +V F DG ++ +++ D + W T + + +
Sbjct: 499 YTVRLWDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTI 557
Query: 144 VGHTNWVRCARMSNDGSIIASCSDDK--STKLWNLDSG 179
G + + R+ D A+ S K +T ++ D G
Sbjct: 558 EGRRD-IAGGRVMTDRRSAANSSSGKCFTTLCYSADGG 594
Score = 41.5 bits (93), Expect = 0.003
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Query: 197 WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYI-LTASKDGKM 255
+H V V S+G LY + + SI + +T + G+++ +K G++
Sbjct: 272 YHQGLDMVVVGFSNGVFGLYQMPDFICIHLLSISRQKLTTAVFNERGNWLTFGCAKLGQL 331
Query: 256 KILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ D I GH VN V +SP ++ DD V +W
Sbjct: 332 LVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVW 376
Score = 31.1 bits (67), Expect = 3.7
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQG 61
H + + + + P+ +Q+A+S+LD + WD + Y +G
Sbjct: 518 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 559
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 78.6 bits (185), Expect = 2e-14
Identities = 60/235 (25%), Positives = 114/235 (48%), Gaps = 14/235 (5%)
Query: 45 VLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGM-FKA 103
+L+WD R + QGH V VT+S + +A+ + D V++W ++G+ + F
Sbjct: 371 LLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVW-NVMSGTCFITFTE 429
Query: 104 HSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHT--NWVRCARMSNDGSI 161
H+ V ++ F +D +++AS D V+ W ++K ++ T +V + +
Sbjct: 430 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVV 489
Query: 162 IASCSDDKSTKLWNLDSGECIHTYKD-LKGHG--LH-LAWHPSGCYVAVATSHGNVKLYD 217
A D +W+ +G+ KD L GH +H L + P +A ++ V+L+D
Sbjct: 490 CAGTLDSFEIFVWSKKTGQI----KDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWD 545
Query: 218 I-RTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSG 271
+ + V+ + HN V VA P G + +++ DG++ D +EG ++T+ G
Sbjct: 546 VFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 599
Score = 66.9 bits (156), Expect = 6e-11
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 2/172 (1%)
Query: 131 LWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
+W +I GH V C S D ++A+ +DD K+WN+ SG C T+ +
Sbjct: 373 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTN 432
Query: 191 HGLHLAWHPSGCYVAVATSHGNVKLYDIRTH-NLVQYYSIHNEAVTQVAIHPSGSYILTA 249
L + + A+ G V+ +D + + N Y + + PSG +
Sbjct: 433 AVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAG 492
Query: 250 SKDG-KMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ D ++ + G LSGH PV+ + FSP +S+ D V +W
Sbjct: 493 TLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLW 544
Score = 62.9 bits (146), Expect = 1e-09
Identities = 48/203 (23%), Positives = 77/203 (37%), Gaps = 2/203 (0%)
Query: 102 KAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSI 161
+ H V V +S D + T +DD VK+W+ +F HTN V D
Sbjct: 386 QGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHS 445
Query: 162 IASCSDDKSTKLWNLDSGECIHTYKD-LKGHGLHLAWHPSGCYVAVATSHG-NVKLYDIR 219
+ S S D + + W+ + TY + L PSG V T + ++ +
Sbjct: 446 LLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKK 505
Query: 220 THNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV 279
T + S H V + P + ++S D +++ D+ HN V V
Sbjct: 506 TGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTV 565
Query: 280 NFSPTGDTFSSAGDDKLVFIWKT 302
F P G +S+ D + W T
Sbjct: 566 AFRPDGKQLASSTLDGQINFWDT 588
Score = 61.3 bits (142), Expect = 3e-09
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 8/209 (3%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
LK+Q GH + + Y+P+ Q +AT + DN V +W++ F H AV + F
Sbjct: 383 LKQQ--GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFM 440
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS---DDKVV 129
+ + SAS D TVR W + + + + V ++D S + + D +
Sbjct: 441 ADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPR-QFVSLTADPSGDVVCAGTLDSFEI 499
Query: 130 KLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGE-CIHTYKDL 188
+WS + GH V S ++AS S D + +LW++ + + + T++
Sbjct: 500 FVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRH- 558
Query: 189 KGHGLHLAWHPSGCYVAVATSHGNVKLYD 217
L +A+ P G +A +T G + +D
Sbjct: 559 NHDVLTVAFRPDGKQLASSTLDGQINFWD 587
Score = 54.8 bits (126), Expect = 3e-07
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDL---RGTMRSYRFQGHDEAVMDV 69
+K L GH+ + L ++P Q +A+SS D +V LWD+ +GT+ ++R H+ V+ V
Sbjct: 509 IKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFR---HNHDVLTV 565
Query: 70 TFSSSGKYMASASRDKTVRIWVPTVTG 96
F GK +AS++ D + W T+ G
Sbjct: 566 AFRPDGKQLASSTLDGQINFW-DTIEG 591
Score = 53.2 bits (122), Expect = 8e-07
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 26 ALYYNPNDQQIATSSLDN-SVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRD 84
+L +P+ + +LD+ + +W + GH+ V + FS + +AS+S D
Sbjct: 479 SLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWD 538
Query: 85 KTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSF 143
TVR+W V G+ F+ H+ V +V F DG ++ +++ D + W T + + +
Sbjct: 539 YTVRLWDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTI 597
Query: 144 VGHTNWVRCARMSNDGSIIASCSDDK--STKLWNLDSG 179
G + + R+ D A+ S K +T ++ D G
Sbjct: 598 EGRRD-IAGGRVMTDRRSAANSSSGKCFTTLCYSADGG 634
Score = 41.5 bits (93), Expect = 0.003
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Query: 197 WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYI-LTASKDGKM 255
+H V V S+G LY + + SI + +T + G+++ +K G++
Sbjct: 312 YHQGLDMVVVGFSNGVFGLYQMPDFICIHLLSISRQKLTTAVFNERGNWLTFGCAKLGQL 371
Query: 256 KILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ D I GH VN V +SP ++ DD V +W
Sbjct: 372 LVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVW 416
Score = 31.1 bits (67), Expect = 3.7
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQG 61
H + + + + P+ +Q+A+S+LD + WD + Y +G
Sbjct: 558 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 599
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 77.4 bits (182), Expect = 4e-14
Identities = 57/299 (19%), Positives = 120/299 (40%), Gaps = 7/299 (2%)
Query: 7 TTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAV 66
T P C + + H+ ++ + N + T D +V +WD G +
Sbjct: 218 TIPSTCANR-IHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNI 276
Query: 67 MDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK-IITASD 125
+D+ + K + +A+ + +W + H+ V +V S S+ +++A+
Sbjct: 277 LDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAY 336
Query: 126 DKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTY 185
D+ +KLW HK + ++ V T+ +S DG + S D + +LW++ +G+ +
Sbjct: 337 DRTIKLWDLHK-GYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEV 395
Query: 186 KDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAV----TQVAIHP 241
++ +G + + ++D RT + + ++ I P
Sbjct: 396 AGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISP 455
Query: 242 SGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
Y+ S DG + + L +G+ + L P+ ++S G +SA + V W
Sbjct: 456 DDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCTW 514
Score = 63.7 bits (148), Expect = 6e-10
Identities = 42/209 (20%), Positives = 87/209 (41%), Gaps = 8/209 (3%)
Query: 103 AHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSII 162
AH S+ F + + T D+ VK+W T+ I S G + +++D +
Sbjct: 229 AHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSV 288
Query: 163 ASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHP----SGCYVAVATSHGNVKLYDI 218
+ + + +W++ SG HT L GH + S +V A +KL+D+
Sbjct: 289 IAATSSNNLFVWDVSSGRVRHT---LTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDL 345
Query: 219 RTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNA 278
+ + + G + + DG +++ D+ G + ++GH+ V +
Sbjct: 346 HKGYCTNTV-LFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTS 404
Query: 279 VNFSPTGDTFSSAGDDKLVFIWKTNFTDL 307
V+ S G+ ++G D + ++ T ++
Sbjct: 405 VSLSRNGNRILTSGRDNVHNVFDTRTLEI 433
Score = 39.1 bits (87), Expect = 0.014
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 6/126 (4%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLR-----GTMRSYRFQGHDEAVM 67
L ++ GH +A+T++ + N +I TS DN ++D R GT+R+ +
Sbjct: 391 LLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSR 450
Query: 68 DVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDK 127
S Y+A+ S D +V +W + + K + + +S G + +A +
Sbjct: 451 SC-ISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASADKNG 509
Query: 128 VVKLWS 133
V W+
Sbjct: 510 YVCTWT 515
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 76.6 bits (180), Expect = 7e-14
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Query: 15 KQLKGHKNAITALYYNPNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSS 73
+ + H + ++ YNP + TSS D++V LW + F+ H V ++
Sbjct: 100 RSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNP 159
Query: 74 S-GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSS-DGSKIITASDDKVVKL 131
G ASAS D T+RIW GST + AH + S ++ D + T+S DK VK+
Sbjct: 160 KHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKV 219
Query: 132 WSTHKHKF-ISSFVGHTNWVRCARMS-NDGSIIASCSDDKSTKLWN 175
W ++ ++ GH VR + S + S+IASCS D S LW+
Sbjct: 220 WDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 51.6 bits (118), Expect = 2e-06
Identities = 51/195 (26%), Positives = 80/195 (41%), Gaps = 10/195 (5%)
Query: 115 SDGSKIITASDDKVVKLWSTH---KHKFISSFVGHTNWVRCA--RMSNDGSIIASCSDDK 169
S S +I A D VK++ T I SF H V+ + S + S DD
Sbjct: 71 SHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDD- 129
Query: 170 STKLWNLDSGECIHTYKDLKGHGLHLAWHPS-GCYVAVATSHGNVKLYDIRTHNLVQYYS 228
+ KLW +D + T+K+ W+P G A A+ ++++D+R
Sbjct: 130 TVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIP 189
Query: 229 IHNEAVTQVAIHPSGSYIL-TASKDGKMKILDLLEGH-PIFTLSGHNGPVNAVNFSP-TG 285
H+ + + IL T+S D +K+ D+ P+ L+GH V V FSP
Sbjct: 190 AHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRR 249
Query: 286 DTFSSAGDDKLVFIW 300
+S D V +W
Sbjct: 250 SLIASCSYDMSVCLW 264
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 75.8 bits (178), Expect = 1e-13
Identities = 70/310 (22%), Positives = 128/310 (41%), Gaps = 24/310 (7%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
+ L+GH + +L + P +I ++S D +++W+ + +++ + VM FS +
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 75 GKYMASASRDKTVRIWVPTVTGS-------TGMFKAHSQTVRSVQF-SSDGSKIITASDD 126
G+ +A D I+ + T + M H V Q+ ++ + +IT+S D
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGD 178
Query: 127 KVVKLWSTHKHKFISSF-----VGHTNWVRCARMS-NDGSIIASCSDDKSTKLWNL-DSG 179
+ LW S F GHT V +S ++ + S S D + +LW+ +
Sbjct: 179 QTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAAS 238
Query: 180 ECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIH----NEAVT 235
+ T+ +G + + P G + G +LYDIRT + +Q Y H N VT
Sbjct: 239 RAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVT 298
Query: 236 QVAIHPSGSYILTA-SKDGKMKILDLLEGHPIFTL----SGHNGPVNAVNFSPTGDTFSS 290
+A SG + + + + D L G + L H ++ + S G +
Sbjct: 299 SIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCT 358
Query: 291 AGDDKLVFIW 300
D + IW
Sbjct: 359 GSWDSNLKIW 368
Score = 48.0 bits (109), Expect = 3e-05
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEA----VMDVTFSSS 74
GH+ + + + P+ + T S D + L+D+R + +Q H + V + FS S
Sbjct: 246 GHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVS 305
Query: 75 GKYM-ASASRDKTVRIWVPTVTGST----GMFK-AHSQTVRSVQFSSDGSKIITASDDKV 128
G+ + A + + T +W T+ G G+ + +H + + S+DGS + T S D
Sbjct: 306 GRLLFAGYASNNTCYVW-DTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSN 364
Query: 129 VKLWSTHKHK 138
+K+W+ H+
Sbjct: 365 LKIWAFGGHR 374
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 74.5 bits (175), Expect = 3e-13
Identities = 74/311 (23%), Positives = 123/311 (39%), Gaps = 32/311 (10%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
+KGH+ +T L YN N + + + D++ +W R ++GH AV S
Sbjct: 33 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSS 92
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
+ + S D+T ++W FK RSV FS + +D V + H
Sbjct: 93 RLITGSADQTAKLWDVKSGKELFTFK-FGAPARSVDFSVGDHLAVITTDHFVGTSSAIHV 151
Query: 137 HKFISSFVGHTNWVRCARMSNDGS-------------IIASCSDDKSTKLWNLDSGECIH 183
+ S DG I S +D + ++W+ ++G+ +
Sbjct: 152 KRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLK 211
Query: 184 TYKDLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIH 240
+ GH L + + KL+D+RT L++ Y+ V VA+
Sbjct: 212 QSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTTV-VPVNAVAMS 270
Query: 241 PSGSYIL------------TASKDGKM--KILDLLEGHPIFTLSGHNGPVNAVNFSPTGD 286
P ++++ T + GK K D + I + GH GP+NA+ FSP G
Sbjct: 271 PLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDTILQEEIGGVKGHFGPINALAFSPDGK 330
Query: 287 TFSSAGDDKLV 297
+FSS G+D V
Sbjct: 331 SFSSGGEDGYV 341
Score = 57.2 bits (132), Expect = 5e-08
Identities = 58/249 (23%), Positives = 99/249 (39%), Gaps = 16/249 (6%)
Query: 50 LRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVR 109
L MR +GH+ + + ++ +G + S ++D T +W G ++ HS V
Sbjct: 24 LETRMRPILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVW 83
Query: 110 SVQFSSDGSKIITASDDKVVKLWSTHKHKFISSF--------VGHTNWVRCARMSNDGSI 161
S D S++IT S D+ KLW K + +F V + A ++ D +
Sbjct: 84 CCDISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFV 143
Query: 162 IASCSDDKSTKLWNLDS--GECIHTYK--DLKGHGLHLAWHPSGCYVAVATSHGNVKLYD 217
S + + + G+ + + D K W P + ++++D
Sbjct: 144 GTSSAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWD 203
Query: 218 IRTHNLVQYYSI---HNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNG 274
T L++ H EA+T + S+ LT S D K+ D+ I T +
Sbjct: 204 AETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYT-TVV 262
Query: 275 PVNAVNFSP 283
PVNAV SP
Sbjct: 263 PVNAVAMSP 271
Score = 44.4 bits (100), Expect = 4e-04
Identities = 38/184 (20%), Positives = 74/184 (40%), Gaps = 12/184 (6%)
Query: 145 GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYV 204
GH + R + +G ++ SC+ D + +W D+GE + TY+ G +
Sbjct: 35 GHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRL 94
Query: 205 AVATSHGNVKLYDIRTHNLVQYY-------SIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
++ KL+D+++ + + S+ +A+ + ++ T+S +I
Sbjct: 95 ITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTSSAIHVKRI 154
Query: 258 LDLLE---GHPIFTLSGHNG--PVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESK 312
+ E G + L +G +N + P T S G+D + IW L +S
Sbjct: 155 AEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSD 214
Query: 313 ENEG 316
E G
Sbjct: 215 EEVG 218
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 74.1 bits (174), Expect = 4e-13
Identities = 74/335 (22%), Positives = 141/335 (42%), Gaps = 26/335 (7%)
Query: 17 LKGHKNAITALYYNPNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSG 75
+ GH++ ++ + NPN + I ++S+D + LWD+ +F GH AV +T S+ G
Sbjct: 52 MDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDG 111
Query: 76 KYMASASRDKTVRIW-VPTVTGSTGMFKAHS-----------QTVRSVQFSSDGSKIITA 123
+ S D TVR+W VP + + + +V +G TA
Sbjct: 112 NVLVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWKNAFWAVDHQFEGDLFATA 171
Query: 124 SDDKVVKLWSTHKHKFISSFVGHTNWVRCARMS-NDGSIIASCSDDKSTKLWNLDSGECI 182
+ +W+ ++ + + SF T+ V R + + +++A+ + D+S +++L
Sbjct: 172 GAQ--LDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLATSASDRSITIYDLRLSSAA 229
Query: 183 HTYKDLKGHGLHLAWHP-SGCYVAVATSHGNVKLYDIRTHNLVQ-YYSIHNEAVTQVAIH 240
+ +AW+P + A G+ +D R + + + H AV +
Sbjct: 230 RKIIMMTKTN-SIAWNPMEPMNLTAANEDGSCYSFDGRKLDEAKCVHKDHVSAVMDIDFS 288
Query: 241 PSGSYILTASKDGKMKILDLLEGHP-IFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFI 299
P+G +T S D ++I GH + V V +S S DD + +
Sbjct: 289 PTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYVISGSDDTNLRL 348
Query: 300 WKTNFTD-----LSSESKENEGQNMITGQ-RHLTE 328
WK ++ L E K++E + + +HL+E
Sbjct: 349 WKAKASEQLGVILPREQKKHEYNEAVKNRYKHLSE 383
Score = 32.7 bits (71), Expect = 1.2
Identities = 42/257 (16%), Positives = 103/257 (40%), Gaps = 17/257 (6%)
Query: 16 QLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDL-RGTMRSYRFQGHDEAVMDVTFSSS 74
Q GH+ A+ L + + + + D +V LW++ R ++ + T+
Sbjct: 94 QFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWK 153
Query: 75 GKYMA---------SASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFS-SDGSKIITAS 124
+ A A+ + IW + F+ + +V SV+F+ + + + T++
Sbjct: 154 NAFWAVDHQFEGDLFATAGAQLDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLATSA 213
Query: 125 DDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWN---LDSGEC 181
D+ + ++ + T A + + + ++D S ++ LD +C
Sbjct: 214 SDRSITIYDLRLSSAARKIIMMTKTNSIAWNPMEPMNLTAANEDGSCYSFDGRKLDEAKC 273
Query: 182 IHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIR-THNLVQYYSIHNEAVTQVAIH 240
+H KD + + + P+G + +V+++ H+ Y++ + V V
Sbjct: 274 VH--KDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYS 331
Query: 241 PSGSYILTASKDGKMKI 257
+Y+++ S D +++
Sbjct: 332 CDATYVISGSDDTNLRL 348
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 74.1 bits (174), Expect = 4e-13
Identities = 52/220 (23%), Positives = 103/220 (46%), Gaps = 25/220 (11%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
K+L+GH+NA+ ++ + + + T S D V +W + + +GH+ + D+ SS+
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSN 358
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFS---SDGSKIITASDDKVVKL 131
+ASAS D +R+W + + H+ V ++ FS + +++++SDD ++
Sbjct: 359 NALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRI 418
Query: 132 WSTHKHKFI---------------SSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLW-- 174
W +++ +S ++ + C + +G+I + S D + ++W
Sbjct: 419 WDARYSQWLPRIYVPSPSDANTGSTSNASQSHQILCCAYNANGTIFVTGSSDSNARVWSA 478
Query: 175 ---NLDSGE-CIHTYKDLKGHGLHLAW-HPSGCYVAVATS 209
NLD E H L+GH + + SGC VA +S
Sbjct: 479 SKPNLDDAEQPTHELDVLRGHENDVNYVQFSGCAVAPKSS 518
Score = 58.4 bits (135), Expect = 2e-08
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 27/208 (12%)
Query: 102 KAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSI 161
+ H V F G +IT SDD++VK+WS ++S GH + +S++ ++
Sbjct: 302 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNAL 361
Query: 162 IASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHP--SGCYVAVATS-HGNVKLYDI 218
+AS S+D ++W L G I + G +A+ P + Y +++S G +++D
Sbjct: 362 VASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDA 421
Query: 219 RTHNLVQ--YYSIHNEAVT----------QV---AIHPSGSYILTASKDGKMKI------ 257
R + Y ++A T Q+ A + +G+ +T S D ++
Sbjct: 422 RYSQWLPRIYVPSPSDANTGSTSNASQSHQILCCAYNANGTIFVTGSSDSNARVWSASKP 481
Query: 258 -LDLLE--GHPIFTLSGHNGPVNAVNFS 282
LD E H + L GH VN V FS
Sbjct: 482 NLDDAEQPTHELDVLRGHENDVNYVQFS 509
Score = 55.2 bits (127), Expect = 2e-07
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 186 KDLKGH--GLHLA-WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPS 242
K L+GH ++ A + SG YV + VK++ + T + H +T +A+ +
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSN 358
Query: 243 GSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDT---FSSAGDDKLVFI 299
+ + +AS D +++ L +G PI L GH G V A+ FSP + S+ DD I
Sbjct: 359 NALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRI 418
Query: 300 WKTNFTD------LSSESKENEGQNMITGQRH 325
W ++ + S S N G Q H
Sbjct: 419 WDARYSQWLPRIYVPSPSDANTGSTSNASQSH 450
Score = 54.0 bits (124), Expect = 5e-07
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 136 KHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHL 195
K + I GH N V CA G + + SDD+ K+W++++ C+ + + +G L
Sbjct: 294 KMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDL 353
Query: 196 AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHP---SGSYILTASKD 252
A + VA A++ ++++ + + H AVT +A P S +L++S D
Sbjct: 354 AVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDD 413
Query: 253 GKMKILD 259
G +I D
Sbjct: 414 GTCRIWD 420
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 73.7 bits (173), Expect = 5e-13
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 8/172 (4%)
Query: 23 AITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGH-DEAVMDVTFSSSGKYMASA 81
A+ + +PN ++ + + ++ +WDLR S D AV +T G + +A
Sbjct: 121 AVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAA 180
Query: 82 SRDKTVRIW-----VPTVTGSTGMFK--AHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
+ T +W T+T + K AH+ + S + TAS DK VK+W+
Sbjct: 181 NNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNV 240
Query: 135 HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYK 186
K GH WV S DG + + S D + +LW++ +G+ + Y+
Sbjct: 241 DGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQ 292
Score = 71.7 bits (168), Expect = 2e-12
Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 9/223 (4%)
Query: 59 FQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGS 118
+ H VM V F K+M S S D TV+IW G +++ + V +V + +
Sbjct: 74 YDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVA-AVNTVVLHPNQT 132
Query: 119 KIITASDDKVVKLWSTHKHKFISSFVGHTNW-VRCARMSNDGSIIASCSDDKSTKLWNLD 177
++I+ + +++W + V + VR + DG+++ + ++ + +W L
Sbjct: 133 ELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRLL 192
Query: 178 SG-------ECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIH 230
G E +H + GH L P+ Y+A A+S VK++++ L + + H
Sbjct: 193 RGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGH 252
Query: 231 NEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHN 273
V G +++TAS D ++ + G + GH+
Sbjct: 253 QRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHH 295
Score = 69.3 bits (162), Expect = 1e-11
Identities = 51/236 (21%), Positives = 103/236 (43%), Gaps = 12/236 (5%)
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKH 137
+A+AS D T+R W + V ++ + D + A+ + ++L+ + +
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPD-KHYLAAACNPHIRLFDVNSN 66
Query: 138 --KFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHL 195
+ + ++ HTN V D + S S+D + K+W+L + C Y+ + +
Sbjct: 67 SPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAAVNT-V 125
Query: 196 AWHPSGCYVAVATSHGNVKLYDIRTHNL-VQYYSIHNEAVTQVAIHPSGSYILTASKDGK 254
HP+ + +GN++++D+R ++ + + AV + + G+ ++ A+ G
Sbjct: 126 VLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGT 185
Query: 255 MKILDLLEG-------HPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
+ LL G P+ L HNG + SP ++A DK V IW +
Sbjct: 186 CYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVD 241
Score = 62.5 bits (145), Expect = 1e-09
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 57 YRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSD 116
++ Q H+ ++ S + KY+A+AS DKTV+IW + H + V FS D
Sbjct: 205 HKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVD 264
Query: 117 GSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARM 155
G ++TAS D +LWS K + + GH C +
Sbjct: 265 GEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCAL 303
Score = 57.6 bits (133), Expect = 4e-08
Identities = 53/246 (21%), Positives = 103/246 (41%), Gaps = 21/246 (8%)
Query: 8 TPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLR--GTMRSYRFQGHDEA 65
+P+P + H N + A+ + + + + + S D +V +WDLR G + Y A
Sbjct: 67 SPQPVMTYD--SHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVA---A 121
Query: 66 VMDVTFSSSGKYMASASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS 124
V V + + S ++ +R+W + + S + VRS+ DG+ ++ A+
Sbjct: 122 VNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAAN 181
Query: 125 DDKVVKLWSTHKHKF-------ISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
+ +W + K + H + +S +A+ S DK+ K+WN+D
Sbjct: 182 NRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVD 241
Query: 178 SGECIHTYKDLKGHGLHL---AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAV 234
K L GH + + G ++ A+S +L+ + V+ Y H++A
Sbjct: 242 G---FKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKAT 298
Query: 235 TQVAIH 240
A+H
Sbjct: 299 VCCALH 304
Score = 55.6 bits (128), Expect = 1e-07
Identities = 60/278 (21%), Positives = 115/278 (41%), Gaps = 18/278 (6%)
Query: 36 IATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTV 94
+AT+S D+++ W+ T R YR Q D V + + Y+A+A V +
Sbjct: 8 LATASYDHTIRFWEAE-TGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPHIRLFDVNSN 66
Query: 95 TGSTGM-FKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCA 153
+ M + +H+ V +V F D + + S+D VK+W + V
Sbjct: 67 SPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYES-VAAVNTV 125
Query: 154 RMSNDGSIIASCSDDKSTKLWNLDSGEC---IHTYKDLKGHGLHLAWHPSGCYVAVATSH 210
+ + + + S + + ++W+L + C + D L + W G V A +
Sbjct: 126 VLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMW--DGTMVVAANNR 183
Query: 211 GNVKLYDI--RTHNLVQYYSI-----HNEAVTQVAIHPSGSYILTASKDGKMKILDLLEG 263
G ++ + + ++ + HN + + + P+ Y+ TAS D +KI + ++G
Sbjct: 184 GTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWN-VDG 242
Query: 264 HPI-FTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ L+GH V FS G+ +A D +W
Sbjct: 243 FKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLW 280
Score = 51.2 bits (117), Expect = 3e-06
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 155 MSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVK 214
MS I+A+ S D + + W ++G C T + H L P Y+A A + +++
Sbjct: 1 MSQPSVILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLA-AACNPHIR 59
Query: 215 LYDIRTHN--LVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDL 260
L+D+ +++ V Y H V V ++ + S+DG +KI DL
Sbjct: 60 LFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDL 107
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 73.3 bits (172), Expect = 7e-13
Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 11/234 (4%)
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDD--KVVKLWST 134
Y+A+AS D+T+R+W F+ V ++ + + K++ A + ++ L S
Sbjct: 12 YLATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVAACNPHIRLFDLRSY 71
Query: 135 HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH 194
+ H + +FV HT V G ++ S S+D S K+W+L EC ++ +
Sbjct: 72 NPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSPVNT- 130
Query: 195 LAWHPSGCYVAVATSHGNVKLYDIRTHNL-VQYYSIHNEAVTQVAIHPSGSYILTASKDG 253
+ HP+ + +GN++++D+R + + + + G+ ++ A+ G
Sbjct: 131 VVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRG 190
Query: 254 KMKI-------LDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ + E P+ L HN + SP ++A DK V IW
Sbjct: 191 TCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIW 244
Score = 64.9 bits (151), Expect = 2e-10
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGH-DEAVMDVTFSSSGKYMASAS 82
+ + +PN ++ + + ++ +WDLR + S + +T G + +A+
Sbjct: 128 VNTVVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAAN 187
Query: 83 RDKTVRIWVP-----TVTGSTGMFK--AHSQTVRSVQFSSDGSKIITASDDKVVKLWSTH 135
T +W T+T + K AH+ + S + TAS DK VK+W+
Sbjct: 188 DRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLD 247
Query: 136 KHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGE 180
K GH WV S DG + + S D + +LW++ +G+
Sbjct: 248 GFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGK 292
Score = 61.7 bits (143), Expect = 2e-09
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 9/222 (4%)
Query: 59 FQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGS 118
F H + VM V F +G M S S D +V+IW V F++ S V +V + +
Sbjct: 80 FVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSP-VNTVVLHPNQT 138
Query: 119 KIITASDDKVVKLWSTHKHKFISSFVGHTNW-VRCARMSNDGSIIASCSDDKSTKLWN-- 175
++I+ + +++W V +R + DG+++ + +D + +W
Sbjct: 139 ELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVWRSL 198
Query: 176 -----LDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIH 230
+ E +H + H L P Y+A A+S VK++++ L + + H
Sbjct: 199 CERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGH 258
Query: 231 NEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGH 272
V G Y++TAS D ++ + G H
Sbjct: 259 ERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAH 300
Score = 61.7 bits (143), Expect = 2e-09
Identities = 31/102 (30%), Positives = 46/102 (45%)
Query: 57 YRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSD 116
++ Q H+ ++ S KY+A+AS DKTV+IW + H + V FS D
Sbjct: 211 HKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMD 270
Query: 117 GSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSND 158
G ++TAS D +LWS K + H C + D
Sbjct: 271 GEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVCCTLLRD 312
Score = 60.5 bits (140), Expect = 5e-09
Identities = 28/89 (31%), Positives = 47/89 (52%)
Query: 16 QLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSG 75
+L+ H + I +P ++ +AT+S D +V +W+L G GH+ V D FS G
Sbjct: 212 KLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDG 271
Query: 76 KYMASASRDKTVRIWVPTVTGSTGMFKAH 104
+Y+ +AS D T R+W +++AH
Sbjct: 272 EYLVTASSDTTARLWSMRAGKEEMVYQAH 300
Score = 54.8 bits (126), Expect = 3e-07
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 15/225 (6%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA 79
H + A+ + + + S D SV +WDLR F+ V V + +
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRS-VSPVNTVVLHPNQTELI 141
Query: 80 SASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW-STHKH 137
S ++ +R+W + S + +RS+ DG+ ++ A+D +W S +
Sbjct: 142 SGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVWRSLCER 201
Query: 138 KFISSF------VGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGH 191
+ ++ F H + + +S +A+ S DK+ K+WNLD K L GH
Sbjct: 202 QTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDG---FKLEKVLTGH 258
Query: 192 GLHL---AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEA 233
+ + G Y+ A+S +L+ +R Y H +A
Sbjct: 259 ERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKA 303
Score = 33.1 bits (72), Expect = 0.91
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT 70
L+K L GH+ + ++ + + + T+S D + LW +R +Q H +A + T
Sbjct: 251 LEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVCCT 308
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 72.5 bits (170), Expect = 1e-12
Identities = 74/311 (23%), Positives = 129/311 (41%), Gaps = 32/311 (10%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
+KGH+ +T L YN + + + D++ LW R ++GH+ AV S
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
+ + S D+T ++W FK ++ T RSV F+ + +D V + + H
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNAPT-RSVDFAVGDRLAVITTDHFVDRTAAIHV 124
Query: 137 HKFI---------SSFVGHT----NWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIH 183
+ S V H + A I S +DK ++W+ ++G+ +
Sbjct: 125 KRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Query: 184 TYKDLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIH 240
+ GH L + + KL+D+RT L++ Y+ V V++
Sbjct: 185 QSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTV-VPVNAVSLS 243
Query: 241 PSGSYIL------------TASKDGKM--KILDLLEGHPIFTLSGHNGPVNAVNFSPTGD 286
P ++++ T + GK K D + I + GH GP+NA+ F+P G
Sbjct: 244 PLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGK 303
Query: 287 TFSSAGDDKLV 297
+FSS G+D V
Sbjct: 304 SFSSGGEDGYV 314
Score = 53.2 bits (122), Expect = 8e-07
Identities = 22/87 (25%), Positives = 47/87 (54%)
Query: 100 MFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDG 159
+ K H + + ++++ +G + + + D LW + + ++ GH V C +S D
Sbjct: 5 LMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDS 64
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYK 186
S + + S D++ KLW++ SG+ + T+K
Sbjct: 65 SRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 52.8 bits (121), Expect = 1e-06
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 22/248 (8%)
Query: 54 MRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQF 113
MR +GH+ + + ++ G + S ++D T +W G ++ H+ V
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 114 SSDGSKIITASDDKVVKLW--STHKHKFISSFVGHTNWV------RCARMSNDGSI---- 161
S D S++IT S D+ KLW + K F F T V R A ++ D +
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTA 120
Query: 162 ---IASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDI 218
+ ++D + + +S +H D K W P + ++++D
Sbjct: 121 AIHVKRIAEDPEEQ--DAESVLVLHC-PDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDA 177
Query: 219 RTHNLVQYYSI---HNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGP 275
T L++ H + +T + S+ LT S D K+ D+ + T + P
Sbjct: 178 ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYT-TVVP 236
Query: 276 VNAVNFSP 283
VNAV+ SP
Sbjct: 237 VNAVSLSP 244
Score = 42.3 bits (95), Expect = 0.001
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 12/184 (6%)
Query: 145 GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYV 204
GH + R + +G ++ SC+ D + LW D+GE + TY+ G +
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 205 AVATSHGNVKLYDIRTHNLVQYY-------SIHNEAVTQVAIHPSGSYI-LTASKDGKMK 256
++ KL+D+++ + + S+ ++A+ + ++ TA+ K
Sbjct: 68 ITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVKRI 127
Query: 257 ILDLLE--GHPIFTLSGHNGP--VNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESK 312
D E + L +G +N + P T S G+DK++ IW L +S
Sbjct: 128 AEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSD 187
Query: 313 ENEG 316
E G
Sbjct: 188 EEVG 191
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 72.5 bits (170), Expect = 1e-12
Identities = 74/311 (23%), Positives = 129/311 (41%), Gaps = 32/311 (10%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
+KGH+ +T L YN + + + D++ LW R ++GH+ AV S
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
+ + S D+T ++W FK ++ T RSV F+ + +D V + + H
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNAPT-RSVDFAVGDRLAVITTDHFVDRTAAIHV 124
Query: 137 HKFI---------SSFVGHT----NWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIH 183
+ S V H + A I S +DK ++W+ ++G+ +
Sbjct: 125 KRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Query: 184 TYKDLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIH 240
+ GH L + + KL+D+RT L++ Y+ V V++
Sbjct: 185 QSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTV-VPVNAVSLS 243
Query: 241 PSGSYIL------------TASKDGKM--KILDLLEGHPIFTLSGHNGPVNAVNFSPTGD 286
P ++++ T + GK K D + I + GH GP+NA+ F+P G
Sbjct: 244 PLLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGK 303
Query: 287 TFSSAGDDKLV 297
+FSS G+D V
Sbjct: 304 SFSSGGEDGYV 314
Score = 53.2 bits (122), Expect = 8e-07
Identities = 22/87 (25%), Positives = 47/87 (54%)
Query: 100 MFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDG 159
+ K H + + ++++ +G + + + D LW + + ++ GH V C +S D
Sbjct: 5 LMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDS 64
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYK 186
S + + S D++ KLW++ SG+ + T+K
Sbjct: 65 SRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 52.8 bits (121), Expect = 1e-06
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 22/248 (8%)
Query: 54 MRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQF 113
MR +GH+ + + ++ G + S ++D T +W G ++ H+ V
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 114 SSDGSKIITASDDKVVKLW--STHKHKFISSFVGHTNWV------RCARMSNDGSI---- 161
S D S++IT S D+ KLW + K F F T V R A ++ D +
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTA 120
Query: 162 ---IASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDI 218
+ ++D + + +S +H D K W P + ++++D
Sbjct: 121 AIHVKRIAEDPEEQ--DAESVLVLHC-PDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDA 177
Query: 219 RTHNLVQYYSI---HNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGP 275
T L++ H + +T + S+ LT S D K+ D+ + T + P
Sbjct: 178 ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYT-TVVP 236
Query: 276 VNAVNFSP 283
VNAV+ SP
Sbjct: 237 VNAVSLSP 244
Score = 42.3 bits (95), Expect = 0.001
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 12/184 (6%)
Query: 145 GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYV 204
GH + R + +G ++ SC+ D + LW D+GE + TY+ G +
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 205 AVATSHGNVKLYDIRTHNLVQYY-------SIHNEAVTQVAIHPSGSYI-LTASKDGKMK 256
++ KL+D+++ + + S+ ++A+ + ++ TA+ K
Sbjct: 68 ITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVKRI 127
Query: 257 ILDLLE--GHPIFTLSGHNGP--VNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESK 312
D E + L +G +N + P T S G+DK++ IW L +S
Sbjct: 128 AEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSD 187
Query: 313 ENEG 316
E G
Sbjct: 188 EEVG 191
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 72.1 bits (169), Expect = 2e-12
Identities = 62/305 (20%), Positives = 129/305 (42%), Gaps = 10/305 (3%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMR---SYRFQGHDEAVMDVTFSS 73
L+ H + + L ++ N + +A+SS D + ++W++ + GH + V+ + +S
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 74 SGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
+ + + ++ +R W M++ + S + DG II D+ + +W
Sbjct: 330 DDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWD 389
Query: 134 THKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGL 193
+ T V M++DG + S D L++ ++ + + +
Sbjct: 390 LDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREA--TVERLIEEEDMIT 447
Query: 194 HLAWHPSGCYVAVATSHGNVKLYDIRTH-NLVQYYSIHNEAVTQVAIHPSG---SYILTA 249
+ Y+ V + ++L++I +V Y H + + G ++I +
Sbjct: 448 SFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASG 507
Query: 250 SKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTG-DTFSSAGDDKLVFIWKTNFTDLS 308
S+D ++ I G I L GH G VN V++SPT +SA DD + IW + +
Sbjct: 508 SEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDRINQQ 567
Query: 309 SESKE 313
++ K+
Sbjct: 568 NQKKK 572
Score = 70.5 bits (165), Expect = 5e-12
Identities = 37/172 (21%), Positives = 81/172 (47%), Gaps = 5/172 (2%)
Query: 91 VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFIS---SFVGHT 147
+P+ T + ++H+ V +QFS +G + ++S D+ +W IS + VGH
Sbjct: 262 IPSQTAQ--ILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHH 319
Query: 148 NWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVA 207
V S D + +C ++ + W++DSG+C+H Y+ + W+P G +
Sbjct: 320 KPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAG 379
Query: 208 TSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILD 259
+ ++ ++D+ + + V+ +A+ G ++++ KD + + D
Sbjct: 380 MTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD 431
Score = 64.5 bits (150), Expect = 3e-10
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 8/212 (3%)
Query: 12 CLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTF 71
C+ KG + I+ +Y P+ Q I D S+ +WDL G + + V D+
Sbjct: 353 CVHMYEKGGISPISCGWY-PDGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAM 411
Query: 72 SSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKL 131
+ GK++ S +D + ++ T + S S+D I+ ++ ++L
Sbjct: 412 TDDGKWLVSVCKDSVISLFDREAT--VERLIEEEDMITSFSLSNDNKYILVNLLNQEIRL 469
Query: 132 WSTH-KHKFISSFVGHTNWVRCARMSNDG---SIIASCSDDKSTKLWNLDSGECIHTYKD 187
W+ K +S + GH R G + IAS S+D +W+ +G+ I
Sbjct: 470 WNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPG 529
Query: 188 LKGHGLHLAWHPSGCY-VAVATSHGNVKLYDI 218
G ++W P+ + +A A+ G ++++ +
Sbjct: 530 HAGAVNCVSWSPTNLHMLASASDDGTIRIWGL 561
Score = 61.7 bits (143), Expect = 2e-09
Identities = 49/253 (19%), Positives = 107/253 (42%), Gaps = 7/253 (2%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
LK L GH + A+ ++P+D+Q+ T + + WD+ + ++ + + +
Sbjct: 311 LKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWY 370
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
G+ + + D+++ +W +Q V + + DG +++ D V+ L+
Sbjct: 371 PDGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLF 430
Query: 133 STHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSG-ECIHTYKDLKGH 191
+ + + + + +SND I ++ +LWN++ + + YK K
Sbjct: 431 D--REATVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRS 488
Query: 192 GLHLAWHPSG---CYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYIL- 247
+ G ++A + V ++ T L+ H AV V+ P+ ++L
Sbjct: 489 RFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLA 548
Query: 248 TASKDGKMKILDL 260
+AS DG ++I L
Sbjct: 549 SASDDGTIRIWGL 561
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 71.3 bits (167), Expect = 3e-12
Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 10/234 (4%)
Query: 77 YMASASRDKTVRIW--VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
++ S+S D ++ + + T T + + H V S+ S+D + + + S D VKL+
Sbjct: 32 FVTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKF 91
Query: 135 HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH 194
+F ++ T +R + GS++A+ DD+ KL N G + K KG
Sbjct: 92 PSGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTG 151
Query: 195 LAWHPSGCYVAVATSHGNVKLYDIR------THNLVQYYSIHNEAVTQV-AIHPSGSYIL 247
L +HP+G +A + G V ++++ T V + N ++ + P G +
Sbjct: 152 LDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLA 211
Query: 248 TASKDGKMKILDLLEGHPIFTLSG-HNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ + D G +F L G H + + ++P G +++G DK V +W
Sbjct: 212 VPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLW 265
Score = 53.6 bits (123), Expect = 6e-07
Identities = 50/254 (19%), Positives = 106/254 (41%), Gaps = 11/254 (4%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
L+ H++ +T+L + + +A+ S+D+ V L+ + + F+ SG
Sbjct: 58 LRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGS 117
Query: 77 YMASASRDKTVRIWVPTVTGS-TGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTH 135
+A+A D+ +++ + T GS + K H V + F +G + + V W
Sbjct: 118 LLAAAGDDEGIKL-INTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQ 176
Query: 136 KH------KFISSFVG-HTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDL 188
K ++ G +T+ V R S DG +A +++ +GE + +
Sbjct: 177 NGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGD 236
Query: 189 KGHGL-HLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYIL 247
+ +L W P+G Y+A + V L+D+ + + E + ++ P+G+ +
Sbjct: 237 HLEAICYLTWAPNGKYIATSGLDKQVLLWDVDKKQDIDRHKF-EERICCMSWKPNGNALS 295
Query: 248 TASKDGKMKILDLL 261
G+ + + L
Sbjct: 296 VIDAKGRYGVWESL 309
Score = 48.0 bits (109), Expect = 3e-05
Identities = 24/89 (26%), Positives = 41/89 (46%)
Query: 213 VKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGH 272
VKLY + + + +A + SGS + A D +K+++ +G + L GH
Sbjct: 86 VKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGH 145
Query: 273 NGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
GPV ++F P G+ +S V W+
Sbjct: 146 KGPVTGLDFHPNGELLASIDTTGTVLCWE 174
Score = 47.2 bits (107), Expect = 5e-05
Identities = 34/144 (23%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 6 VTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQ----- 60
+ T + + + LKGHK +T L ++PN + +A+ +VL W+L+ + S+ +
Sbjct: 131 INTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPD 190
Query: 61 -GHDEAVMDV-TFSSSGKYMASASRDKTVRIWVPTVTGST--GMFKAHSQTVRSVQFSSD 116
G + +++++ +S G+ +A V + TG + H + + + ++ +
Sbjct: 191 TGFNTSIVNIPRWSPDGRTLAVPGLRNDV-VMYDRFTGEKLFALRGDHLEAICYLTWAPN 249
Query: 117 GSKIITASDDKVVKLWSTHKHKFI 140
G I T+ DK V LW K + I
Sbjct: 250 GKYIATSGLDKQVLLWDVDKKQDI 273
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 70.9 bits (166), Expect = 4e-12
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 17/257 (6%)
Query: 62 HDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGM---FKAHSQTVRSVQFSSDGS 118
H V V FS+SGKY+A+AS D T IW + ++H V V +S D +
Sbjct: 223 HKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDT 282
Query: 119 KIITASDDKVVKLWSTH----KHKFISSFVGHTNWVRCARMSNDGSIIASCSD-DKSTKL 173
K++T + +V+KLW +H F ++ G T CA + ++ SD ++ +
Sbjct: 283 KLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFT-VSSCAWFPDSTRLVCGSSDPERGIVM 341
Query: 174 WNLDSGECIHTYKDLK-GHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNE 232
W+ D E I ++ + + LA P G + S +++ ++ T V+ +
Sbjct: 342 WDTDGNE-IKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLETK--VERVISEEQ 398
Query: 233 AVTQVAIHPSGSYILTASKDGKMKILDLL-EGHPIFTLSGHNGPVNAVN--FSPTGDTFS 289
+T ++I G + + ++ + DL E SGH + F +F
Sbjct: 399 PITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFI 458
Query: 290 SAG-DDKLVFIWKTNFT 305
++G +D V+IW T
Sbjct: 459 ASGSEDSQVYIWNLKNT 475
Score = 62.9 bits (146), Expect = 1e-09
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 14/218 (6%)
Query: 103 AHSQTVRSVQFSSDGSKIITASDDKVVKLWST---HKHKFISSFVGHTNWVRCARMSNDG 159
AH V VQFS+ G + TAS D +W +K + + H N V S D
Sbjct: 222 AHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDD 281
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTY-KDLKGHGL-HLAWHPSGCYVAVATS--HGNVKL 215
+ + +C + + KLW++D+G HT+ + G + AW P + +S + +
Sbjct: 282 TKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVM 341
Query: 216 YDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGP 275
+D + + + V +A+ P G ++T D +++IL+L + + P
Sbjct: 342 WDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNL--ETKVERVISEEQP 399
Query: 276 VNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKE 313
+ +++ S G F + + +W DL+ E K+
Sbjct: 400 ITSLSISGDGKFFIVNLSCQEIHLW-----DLAGEWKQ 432
Score = 61.3 bits (142), Expect = 3e-09
Identities = 63/296 (21%), Positives = 130/296 (43%), Gaps = 14/296 (4%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMR---SYRFQGHDEAVMDVTFSS 73
L HKN + + ++ + + +AT+S D + ++W + + + + H V V++S
Sbjct: 220 LVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSP 279
Query: 74 SGKYMASASRDKTVRIW-VPT-VTGSTGMFKAHSQTVRSVQFSSDGSKIITASDD--KVV 129
+ + + +++W V T V T TV S + D ++++ S D + +
Sbjct: 280 DDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGI 339
Query: 130 KLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLK 189
+W T ++ + V ++ DG + + DK ++ NL++ + +
Sbjct: 340 VMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLETK--VERVISEE 397
Query: 190 GHGLHLAWHPSGCYVAVATSHGNVKLYDIRTH-NLVQYYSIHNEAVTQVAIHPSG---SY 245
L+ G + V S + L+D+ +S H ++ + G S+
Sbjct: 398 QPITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSF 457
Query: 246 ILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGD-TFSSAGDDKLVFIW 300
I + S+D ++ I +L P+ LSGH+ VN V+++P +SA DD+ + IW
Sbjct: 458 IASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 48.8 bits (111), Expect = 2e-05
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRS-YRFQGHDEAVMDVTFSSSG---KYMA 79
IT+L + + + + + LWDL G + +F GH ++ + G ++A
Sbjct: 400 ITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIA 459
Query: 80 SASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKII-TASDDKVVKLWSTHK 136
S S D V IW T + HS TV V ++ +++ +ASDD+ +++W K
Sbjct: 460 SGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIWGPGK 517
Score = 41.1 bits (92), Expect = 0.003
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 7/167 (4%)
Query: 140 ISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWN-LDSG--ECIHTYKDLKGHGLHLA 196
+ V H N V + SN G +A+ S D + +W LD E HT + + ++
Sbjct: 217 VQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVS 276
Query: 197 WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNE--AVTQVAIHPSGSYILTASKDGK 254
W P + + +KL+D+ T L + +N V+ A P + ++ S D +
Sbjct: 277 WSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPE 336
Query: 255 MKILDL-LEGHPIFTLSGHNGP-VNAVNFSPTGDTFSSAGDDKLVFI 299
I+ +G+ I G P V + +P G++ + DK + I
Sbjct: 337 RGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRI 383
Score = 39.5 bits (88), Expect = 0.010
Identities = 46/251 (18%), Positives = 102/251 (40%), Gaps = 16/251 (6%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT-- 70
LK L+ H+N ++ + ++P+D ++ T + LWD+ + + F G++ V+
Sbjct: 261 LKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTF-GNNNTGFTVSSC 319
Query: 71 --FSSSGKYM-ASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDK 127
F S + + S+ ++ + +W V + + DG +IT DK
Sbjct: 320 AWFPDSTRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDK 379
Query: 128 VVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKD 187
+++ + + + + +S DG + LW+L +GE K
Sbjct: 380 EIRILNLETK--VERVISEEQPITSLSISGDGKFFIVNLSCQEIHLWDL-AGEWKQPLK- 435
Query: 188 LKGH--GLHLAWHPSG----CYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHP 241
GH ++ G ++A + V +++++ ++ S H+ V V+ +P
Sbjct: 436 FSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNP 495
Query: 242 SGSYILTASKD 252
+L ++ D
Sbjct: 496 KNPRMLASASD 506
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 69.3 bits (162), Expect = 1e-11
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 37 ATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTG 96
A+S D+ +WDLR FQGH + V+ V FS +G ++AS D RIW +
Sbjct: 146 ASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRK 205
Query: 97 STGMFKAHSQTVRSVQFS-SDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARM 155
+ AH V V++ + + TAS D V +WS + S VGH + V +
Sbjct: 206 LLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASLDI 265
Query: 156 SNDGS 160
+ D S
Sbjct: 266 AVDSS 270
Score = 65.3 bits (152), Expect = 2e-10
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 22/225 (9%)
Query: 61 GHDEAVMDVTFSSSGKYMASASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSS-DGS 118
G D + + S GK + + S ++W VP VT + K H + V V FSS D
Sbjct: 61 GDDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDE 120
Query: 119 KIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDS 178
+ TAS D+ K+W T + +F AS D ++W+L +
Sbjct: 121 CLATASTDRTEKIWKT-DGTLLQTFK------------------ASSGFDSLARVWDLRT 161
Query: 179 GECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVA 238
I ++ L + + P+G ++A +++D+R L+ H V+QV
Sbjct: 162 ARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVK 221
Query: 239 IHPSGSYIL-TASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFS 282
P Y L TAS D + I + + +L GH V +++ +
Sbjct: 222 YEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASLDIA 266
Score = 59.3 bits (137), Expect = 1e-08
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 24/177 (13%)
Query: 17 LKGHKNAITALYYNP-NDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSG 75
LKGHK +T + ++ +D+ +AT+S D + +W GT+ TF +S
Sbjct: 102 LKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKTDGTLLQ-------------TFKASS 148
Query: 76 KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTH 135
+ D R+W + +F+ H + V SV FS +G + + +D ++W
Sbjct: 149 GF------DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLR 202
Query: 136 KHKFISSFVGHTNWVRCARMS-NDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGH 191
K + H N V + + +A+ S D + +W SG K L GH
Sbjct: 203 MRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIW---SGRDFSLVKSLVGH 256
Score = 52.8 bits (121), Expect = 1e-06
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 114 SSDGSKIITASDDKVVKLWSTHK-HKFISSFVGHTNWVRCARMSN-DGSIIASCSDDKST 171
S DG ++T S V KLW + I GH V S+ D +A+ S D++
Sbjct: 72 SRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTE 131
Query: 172 KLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHN 231
K+W D G + T+K G + ++A +++D+RT + + H
Sbjct: 132 KIWKTD-GTLLQTFKASSG------------FDSLA------RVWDLRTARNILIFQGHI 172
Query: 232 EAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTF-SS 290
+ V V P+G ++ + +D + +I DL ++ + H V+ V + P F ++
Sbjct: 173 KQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLAT 232
Query: 291 AGDDKLVFIW 300
A D V IW
Sbjct: 233 ASHDMNVNIW 242
Score = 50.8 bits (116), Expect = 4e-06
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKY 77
+GH + ++ ++PN +A+ DN +WDLR Y H V V + +Y
Sbjct: 169 QGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERY 228
Query: 78 -MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGS 118
+A+AS D V IW H V S+ + D S
Sbjct: 229 FLATASHDMNVNIWSGRDFSLVKSLVGHESKVASLDIAVDSS 270
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 68.5 bits (160), Expect = 2e-11
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 19/248 (7%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
+ L+GH + +L + P +I ++S D +++W+ + +++ + VM FS +
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 75 GKYMASASRDKTVRIWVPTVTGS-------TGMFKAHSQTVRSVQF-SSDGSKIITASDD 126
G+ +A D I+ + T + M H V Q+ ++ + +IT+S D
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGD 178
Query: 127 KVVKLWSTHKHKFISSF-----VGHTNWVRCARMS-NDGSIIASCSDDKSTKLWNL-DSG 179
+ LW S F GHT V +S ++ + S S D + +LW+ +
Sbjct: 179 QTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAAS 238
Query: 180 ECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIH----NEAVT 235
+ T+ +G + + P G + G +LYDIRT + +Q Y H N VT
Sbjct: 239 RAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVT 298
Query: 236 QVAIHPSG 243
+A SG
Sbjct: 299 SIAFSVSG 306
Score = 66.1 bits (154), Expect = 1e-10
Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 20/269 (7%)
Query: 60 QGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK 119
QGH V + ++ + SAS+D + +W + T K V + FS +G
Sbjct: 62 QGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQS 121
Query: 120 IITASDDKVVKLWSTHKHKFISSFV-------GHTNWVRCAR-MSNDGSIIASCSDDKST 171
+ D V ++S V GH +V C + + N+ + + + S D++
Sbjct: 122 VACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTC 181
Query: 172 KLWNLDSGECIHTY--KDLKGHGLH-LAWHPSGC---YVAVATSHGNVKLYDIRTHN-LV 224
LW++ +G + + GH L+ SG + + +L+D R + V
Sbjct: 182 ILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAV 241
Query: 225 QYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTL----SGHNGPVNAVN 280
+ + H V V P G T S DG ++ D+ GH + G NGPV ++
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 301
Query: 281 FSPTGD-TFSSAGDDKLVFIWKTNFTDLS 308
FS +G F+ + ++W T + S
Sbjct: 302 FSVSGRLLFAGYASNNTCYVWDTLLGEFS 330
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 68.5 bits (160), Expect = 2e-11
Identities = 67/301 (22%), Positives = 121/301 (40%), Gaps = 24/301 (7%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASR 83
+ +L + P +I ++S D +++W+ + +++ + VM FS +G+ +A
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGL 65
Query: 84 DKTVRIWVPTVTGS-------TGMFKAHSQTVRSVQF-SSDGSKIITASDDKVVKLWSTH 135
D I+ + T + M H V Q+ ++ + +IT+S D+ LW
Sbjct: 66 DSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 125
Query: 136 KHKFISSF-----VGHTNWVRCARMSNDG-SIIASCSDDKSTKLWNLDSGE-CIHTYKDL 188
S F GHT V +S + S S D + +LW+ + + T+
Sbjct: 126 TGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 185
Query: 189 KGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIH----NEAVTQVAIHPSGS 244
+G + + P G + G +LYDIRT + +Q Y H N VT +A SG
Sbjct: 186 EGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGR 245
Query: 245 YILTA-SKDGKMKILDLLEGHPIFTL----SGHNGPVNAVNFSPTGDTFSSAGDDKLVFI 299
+ + + + D L G + L H ++ + S G + D + I
Sbjct: 246 LLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKI 305
Query: 300 W 300
W
Sbjct: 306 W 306
Score = 60.5 bits (140), Expect = 5e-09
Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 20/260 (7%)
Query: 63 DEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIIT 122
D V + ++ + SAS+D + +W + T K V + FS +G +
Sbjct: 3 DLQVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVAC 62
Query: 123 ASDDKVVKLWS----THKHKFI---SSFVGHTNWVRCAR-MSNDGSIIASCSDDKSTKLW 174
D V ++S K + GH +V C + + N+ + + + S D++ LW
Sbjct: 63 GGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILW 122
Query: 175 NLDSG--ECIHTYKDLKGHGLH-LAWHPSGC---YVAVATSHGNVKLYDIR-THNLVQYY 227
++ +G + + GH L+ SG + + +L+D R V+ +
Sbjct: 123 DVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTF 182
Query: 228 SIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTL----SGHNGPVNAVNFSP 283
H V V P G T S DG ++ D+ GH + G NGPV ++ FS
Sbjct: 183 HGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSV 242
Query: 284 TGD-TFSSAGDDKLVFIWKT 302
+G F+ + ++W T
Sbjct: 243 SGRLLFAGYASNNTCYVWDT 262
Score = 48.0 bits (109), Expect = 3e-05
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEA----VMDVTFSSS 74
GH+ + + + P+ + T S D + L+D+R + +Q H + V + FS S
Sbjct: 184 GHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVS 243
Query: 75 GKYM-ASASRDKTVRIWVPTVTGST----GMFK-AHSQTVRSVQFSSDGSKIITASDDKV 128
G+ + A + + T +W T+ G G+ + +H + + S+DGS + T S D
Sbjct: 244 GRLLFAGYASNNTCYVW-DTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSN 302
Query: 129 VKLWSTHKHK 138
+K+W+ H+
Sbjct: 303 LKIWAFGGHR 312
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 67.7 bits (158), Expect = 3e-11
Identities = 64/310 (20%), Positives = 134/310 (43%), Gaps = 23/310 (7%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWD-------LRGTMRSY----RFQGHD 63
K L HK+ + ++P+ AT D S+ L++ + G ++ F H
Sbjct: 25 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHA 84
Query: 64 EAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQT--VRSVQFSSDGSKII 121
E + D+ F + S+++D ++ + + T + FK T VRS+ F G ++
Sbjct: 85 EPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLL 144
Query: 122 TASDDKVVKLWSTHKHK-FI-SSFV--GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
+D + L+ + ++ F+ S+F G + + R S+ GSI + S D + +L++
Sbjct: 145 AGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGV 204
Query: 178 SGECIHTYKDLKGHG--LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYY--SIHNEA 233
S +C+ + + G + +V + VKL++I + +V+ Y + +
Sbjct: 205 SAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKL 264
Query: 234 VTQVAIHPSGSYILTASK-DGKMKILDLLEGHPIFTL-SGHNGPVNAVNFSPTGDTFSSA 291
+Q + + ++++ + ++ D + S HNG + SP F +
Sbjct: 265 RSQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTC 324
Query: 292 GDDKLVFIWK 301
G D+ + WK
Sbjct: 325 GIDRSIRFWK 334
Score = 50.4 bits (115), Expect = 6e-06
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 20/177 (11%)
Query: 135 HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD------SGE-----CIH 183
H+ K +S H + VRCAR S DG A+ D S KL+ + SG+ I
Sbjct: 22 HESKTLSE---HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIR 78
Query: 184 TYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEA--VTQVAIHP 241
T+ D L +HP + + +K +D + + + + V ++ HP
Sbjct: 79 TFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHP 138
Query: 242 SGSYILTASKDGKMKILDLLEGHPI----FTLSGHNGPVNAVNFSPTGDTFSSAGDD 294
SG ++L + + D+ F SG +G +N V +S TG + +A D
Sbjct: 139 SGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKD 195
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 67.7 bits (158), Expect = 3e-11
Identities = 64/310 (20%), Positives = 134/310 (43%), Gaps = 23/310 (7%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWD-------LRGTMRSY----RFQGHD 63
K L HK+ + ++P+ AT D S+ L++ + G ++ F H
Sbjct: 117 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHA 176
Query: 64 EAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQT--VRSVQFSSDGSKII 121
E + D+ F + S+++D ++ + + T + FK T VRS+ F G ++
Sbjct: 177 EPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLL 236
Query: 122 TASDDKVVKLWSTHKHK-FI-SSFV--GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
+D + L+ + ++ F+ S+F G + + R S+ GSI + S D + +L++
Sbjct: 237 AGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGV 296
Query: 178 SGECIHTYKDLKGHG--LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYY--SIHNEA 233
S +C+ + + G + +V + VKL++I + +V+ Y + +
Sbjct: 297 SAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKL 356
Query: 234 VTQVAIHPSGSYILTASK-DGKMKILDLLEGHPIFTL-SGHNGPVNAVNFSPTGDTFSSA 291
+Q + + ++++ + ++ D + S HNG + SP F +
Sbjct: 357 RSQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTC 416
Query: 292 GDDKLVFIWK 301
G D+ + WK
Sbjct: 417 GIDRSIRFWK 426
Score = 50.4 bits (115), Expect = 6e-06
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 20/177 (11%)
Query: 135 HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD------SGE-----CIH 183
H+ K +S H + VRCAR S DG A+ D S KL+ + SG+ I
Sbjct: 114 HESKTLSE---HKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIR 170
Query: 184 TYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEA--VTQVAIHP 241
T+ D L +HP + + +K +D + + + + V ++ HP
Sbjct: 171 TFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHP 230
Query: 242 SGSYILTASKDGKMKILDLLEGHPI----FTLSGHNGPVNAVNFSPTGDTFSSAGDD 294
SG ++L + + D+ F SG +G +N V +S TG + +A D
Sbjct: 231 SGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKD 287
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 67.7 bits (158), Expect = 3e-11
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 15/297 (5%)
Query: 9 PEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMD 68
P C + KGH A+T++ + + + IA+ S D SV +W++ T R + DEA+M
Sbjct: 412 PNSCYL-EYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVE-TGRCLKVWQFDEAIMC 469
Query: 69 VTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQF-SSDGS--KIITASD 125
V ++ + A ++ T G+ + + + S D S I+T
Sbjct: 470 VAWNPLSRLPVLAVAMGRDLFFLNTELGTDEEQEITKERLHSGNIPEPDASVAAIVTWLP 529
Query: 126 DKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTY 185
D++ K ISS H R + S + + + + L L +
Sbjct: 530 DELYGGIKIRHFKSISSIDWH-------RKGDYLSTVMASGETRGVVLHQLSKQKTQRLP 582
Query: 186 KDLKGHGLHLAWHPSGCYVAVATSHGNVKLYD-IRTHNLVQYYSIHNEAVTQVAIHPSGS 244
++G + +HPS Y VAT +V++Y+ ++ + ++ +AIHP G
Sbjct: 583 FKIRGLPVCTLFHPSLSYFFVAT-RKDVRVYNLLKPGEATKKLETGLREISSMAIHPGGD 641
Query: 245 YILTASKDGKMKILDL-LEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
++ SK+GKM D+ L P TL H + V + F+S +D +++
Sbjct: 642 NLIVGSKEGKMCWFDMDLSSKPYKTLKNHPKDITNVAVHRSYPLFASCSEDSTAYVF 698
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 66.9 bits (156), Expect = 6e-11
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 15/247 (6%)
Query: 61 GHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSD-GSK 119
G+ + V FS+ G+ + + S D ++ ++ + AH+ V +V F+ + G+
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 120 IITASDDKVVKLWSTH----KHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWN 175
I++ SDD + K+W + K VGH V DG S D++ KLW+
Sbjct: 287 ILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
Query: 176 LD--SGECIHTYKDLKGHGLHLAW--HPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHN 231
+ S ++ L+ + W +P+ +V Y + H++++
Sbjct: 347 IRKMSSSAPARHEVLRNYEWDYRWMDYPTEARDLKHPLDQSVSTY--KGHSVLRTLI--- 401
Query: 232 EAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDT-FSS 290
A YI T S D + I DL+ G + L H+ PV N+ P T SS
Sbjct: 402 RCYFSPAHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISS 461
Query: 291 AGDDKLV 297
+ D LV
Sbjct: 462 SWDGDLV 468
Score = 49.6 bits (113), Expect = 1e-05
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS-SSGKY 77
G+ I ++ ++ + +++ S D+S+ ++DL S R H V V F+ SG
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 78 MASASRDKTVRIWVPTV----TGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
+ S S D ++W G+ H + V + DG I+ D+ +KLW
Sbjct: 287 ILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
Query: 134 THK 136
K
Sbjct: 347 IRK 349
Score = 39.1 bits (87), Expect = 0.014
Identities = 40/185 (21%), Positives = 75/185 (40%), Gaps = 17/185 (9%)
Query: 25 TALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR----FQGHDEAVMDVTFSSSGKYMAS 80
T + + + I + S DN +WD R + + GH E V + G+Y S
Sbjct: 276 TVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFIS 335
Query: 81 ASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFI 140
+D+T+++W + + A + +R+ ++ T + D L + +
Sbjct: 336 NGKDQTIKLW--DIRKMSSSAPARHEVLRNYEWDYRWMDYPTEARDLKHPL-----DQSV 388
Query: 141 SSFVGHT---NWVRC---ARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH 194
S++ GH+ +RC S I + S+D S +++L SG+ + K
Sbjct: 389 STYKGHSVLRTLIRCYFSPAHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRD 448
Query: 195 LAWHP 199
WHP
Sbjct: 449 CNWHP 453
Score = 35.1 bits (77), Expect = 0.23
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Query: 201 GCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAI-HPSGSYILTASKDGKMKILD 259
G V +S ++ +YD+ + + H V V SG+ IL+ S D K+ D
Sbjct: 241 GREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWD 300
Query: 260 ----LLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ P L GH V ++ G F S G D+ + +W
Sbjct: 301 RRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLW 345
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 66.9 bits (156), Expect = 6e-11
Identities = 80/379 (21%), Positives = 149/379 (39%), Gaps = 24/379 (6%)
Query: 13 LKKQLKG-HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGT-MRSYRFQGHDEAVMDVT 70
LK + G H T Y+PN + IA+ + +V +W + F+ + D+
Sbjct: 47 LKVSIYGEHAYPATVARYSPNGEWIASGDVSGTVRIWGAYNDHVLKNEFKVLAGRIDDLQ 106
Query: 71 FSSSGKYMASASRDK---TVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGS-KIITASDD 126
+S+ G + ++ K VR ++ + G F HS+ V S +I+T +D
Sbjct: 107 WSADGMRIVASGDGKGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGED 166
Query: 127 KVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYK 186
+V + KF S H+N+V C R + DGS + S DK +++ + E +
Sbjct: 167 FLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELS 226
Query: 187 DLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHP-- 241
GH ++W P G V ++ + K++DI + + N + +
Sbjct: 227 SDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDML 286
Query: 242 -----SGSYILTASKDGKMKILDL--LEGHPIFTLSGHNGPVNAVN-FSPTGDTFSSAGD 293
+I+T S G + I L+ P F SGH V+++ D S
Sbjct: 287 VGCLWQNDHIVTVSLGGTISIFSASDLDKSP-FQFSGHMKNVSSLAVLKGNADYILSGSY 345
Query: 294 DKLVFIWK--TNFTDLSSESKENEGQNMITGQRHLTEEGIDTITENGQIQDVNILSKKAL 351
D L+ W F ++ ++ + + + G D +D +++++
Sbjct: 346 DGLICKWMLGRGFCGKLQRTQNSQIKCFAAHEEEIVTSGYDNKISRISYKDDQCTNEESI 405
Query: 352 DY--DLRDISEGSLPEDFV 368
D +D+S L D +
Sbjct: 406 DIGNQPKDLSLAPLSPDLL 424
Score = 56.4 bits (130), Expect = 9e-08
Identities = 61/295 (20%), Positives = 127/295 (43%), Gaps = 19/295 (6%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLR----GTMRS-YRFQGHDEAVMDVTFSS 73
GHK +I A+ ++P+ +Q+ T S D S +WD+ G++ + G V D+
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGC 289
Query: 74 --SGKYMASASRDKTVRIWVPT-VTGSTGMFKAHSQTVRSVQ-FSSDGSKIITASDDKVV 129
++ + S T+ I+ + + S F H + V S+ + I++ S D ++
Sbjct: 290 LWQNDHIVTVSLGGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNADYILSGSYDGLI 349
Query: 130 KLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYK-DL 188
W + + ++C +++ I+ S D+K +++ D +C + D+
Sbjct: 350 CKWMLGRGFCGKLQRTQNSQIKCFA-AHEEEIVTSGYDNKISRISYKDD-QCTNEESIDI 407
Query: 189 KGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILT 248
L+ P + + T V +R +V ++ VT +A+ P G+ +
Sbjct: 408 GNQPKDLSLAPLSPDLLLVTFESGVVF--LRDGKVVSTINL-GFIVTALAVTPDGTEAVI 464
Query: 249 ASKDGKMKILDLLEGHPIF---TLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+DGK+ + + G + L H G ++ + +SP F+SA ++ +W
Sbjct: 465 GGQDGKLHLYSI-NGDSLTEEAVLERHRGAISVIRYSPDLSMFASADLNREAVVW 518
Score = 53.2 bits (122), Expect = 8e-07
Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 8/225 (3%)
Query: 44 SVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW-VPTVTGSTGMFK 102
SV+ DL ++ + H +S +G+++AS TVRIW FK
Sbjct: 37 SVVTLDLNNPLKVSIYGEHAYPATVARYSPNGEWIASGDVSGTVRIWGAYNDHVLKNEFK 96
Query: 103 AHSQTVRSVQFSSDGSKIITASDDK---VVKLWSTHKHKFISSFVGHTNWV-RCARMSND 158
+ + +Q+S+DG +I+ + D K +V+ + + F GH+ V CA
Sbjct: 97 VLAGRIDDLQWSADGMRIVASGDGKGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPTR 156
Query: 159 GSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDI 218
I +C +D + + + ++ + + P G +S +YD
Sbjct: 157 PFRIVTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDG 216
Query: 219 RTHNLVQYYSI---HNEAVTQVAIHPSGSYILTASKDGKMKILDL 260
+T ++ S H ++ V+ P G +LT S D KI D+
Sbjct: 217 KTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIWDI 261
Score = 49.2 bits (112), Expect = 1e-05
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 114 SSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKL 173
+S I+ + VV L + K +S + H AR S +G IAS + ++
Sbjct: 24 NSKSDTILYTNGRSVVTLDLNNPLK-VSIYGEHAYPATVARYSPNGEWIASGDVSGTVRI 82
Query: 174 WNLDSGECI-HTYKDLKGHGLHLAWHPSGCYVAVATSHGN----VKLYDIRTHNLVQYYS 228
W + + + +K L G L W G + VA+ G V+ + + + V +
Sbjct: 83 WGAYNDHVLKNEFKVLAGRIDDLQWSADGMRI-VASGDGKGKSLVRAFMWDSGSNVGEFD 141
Query: 229 IHNEAVTQVAIHPSGSY-ILTASKDGKMKILDLLEGHPI-FTLSG--HNGPVNAVNFSPT 284
H+ V AI P+ + I+T +D +++ EG P F LS H+ VN V F+P
Sbjct: 142 GHSRRVLSCAIKPTRPFRIVTCGEDF---LVNFYEGPPFKFKLSSREHSNFVNCVRFAPD 198
Query: 285 GDTFSSAGDDKLVFIWKTNFTDLSSESKENEG 316
G F + DK I+ ++ E ++G
Sbjct: 199 GSKFITVSSDKKGIIYDGKTCEILGELSSDDG 230
Score = 46.0 bits (104), Expect = 1e-04
Identities = 28/120 (23%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWD-LRGTMRSYRFQGHDEAVMDVTFSSSG 75
L+ H+ AI+ + Y+P+ A++ L+ ++WD + M+ H + + +S +
Sbjct: 487 LERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNS 546
Query: 76 KYMASASRDKTVRIWVPTVTGSTGMF--KAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
+A+ S D V ++ S+ M AH V + F+ D S ++++ +D +++WS
Sbjct: 547 TMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFADD-SHVVSSGEDACIRVWS 605
Score = 35.5 bits (78), Expect = 0.17
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLW--DLRGTMRSYRFQGHDEAVMDVTFS 72
K + H I L ++PN +AT SLD V+++ D + R H V + F+
Sbjct: 528 KNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFA 587
Query: 73 SSGKYMASASRDKTVRIW 90
++ S+ D +R+W
Sbjct: 588 DD-SHVVSSGEDACIRVW 604
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 66.1 bits (154), Expect = 1e-10
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-----FQGHDEAVMDVTF 71
L+GH++ + ++ +N + +AT D SV +W+++ GH E V V +
Sbjct: 88 LRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLW 147
Query: 72 SSSGKYMASASRDKTVRIWVPT--------VTGSTGMFKAHSQTVRSVQFSSDGSKIITA 123
+ + S S D T++IW V + + HS TV S+ F++ G K++T
Sbjct: 148 HPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTC 207
Query: 124 SDDKVVKLWSTHKHKFISSFVGHTNWVRCARMS 156
SDD VK+W T + + S G+ W +S
Sbjct: 208 SDDLAVKIWKTDISR-MQSGEGYVPWTHVCTLS 239
Score = 60.5 bits (140), Expect = 5e-09
Identities = 70/303 (23%), Positives = 135/303 (44%), Gaps = 44/303 (14%)
Query: 58 RFQGHDEAVMDVTFSSSGK-YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSD 116
+ +GH + V +V ++ + +AS S DKTVRIW + + ++ + + S D
Sbjct: 15 KLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE-----QSSLTRSWTCKLGHRLGSFD 69
Query: 117 GSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNL 176
G+ + + ++T +S GH + V+ + GS++A+C DKS +W +
Sbjct: 70 GNTCVWEN-------FATDSES-VSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEI 121
Query: 177 --DSGECIHTYKDLKGHG---LHLAWHPSGCYVAVATSHGNVKLY----DIRTHNLVQYY 227
+ + T L GH + WHP+ + + +K++ + +N VQ
Sbjct: 122 QPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTL 181
Query: 228 SI----HNEAVTQVAIHPSGSYILTASKDGKMKI-------LDLLEGH----PIFTLSG- 271
S H+ V ++ + +G ++T S D +KI + EG+ + TLSG
Sbjct: 182 SELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGF 241
Query: 272 HNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEGQNMITGQRHLTEEGI 331
H+ + +V++S G S AGDD + F D S+S + ++ + E +
Sbjct: 242 HDRTIYSVHWSRDGVIASGAGDDTIQL-----FVDSDSDSVDGPSYKLLVKKEKAHEMDV 296
Query: 332 DTI 334
+++
Sbjct: 297 NSV 299
Score = 54.4 bits (125), Expect = 3e-07
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 35/258 (13%)
Query: 15 KQLKGHKNAITALYYNPN-DQQIATSSLDNSVLLWDLRGTMRSYRFQ-GHDEAVMDVTFS 72
++L+GH + + + +NP D IA+ S D +V +W+ RS+ + GH
Sbjct: 14 QKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGH---------- 63
Query: 73 SSGKYMASASRDKTVRIW--VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVK 130
S D +W T + S + + H V+SV +++ GS + T DK V
Sbjct: 64 ------RLGSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVW 117
Query: 131 LWSTHKHK-----FISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGE----C 181
+W + I+ GH+ V+ ++ SCS D + K+W + + C
Sbjct: 118 IWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNC 177
Query: 182 IHTYKDL-KGHG---LHLAWHPSGCYVAVATSHGNVKLY--DIRTHNLVQYYSIHNEAVT 235
+ T +L GH ++++ +G + + VK++ DI + Y T
Sbjct: 178 VQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCT 237
Query: 236 QVAIHPSGSYILTASKDG 253
H Y + S+DG
Sbjct: 238 LSGFHDRTIYSVHWSRDG 255
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 65.3 bits (152), Expect = 2e-10
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 19/295 (6%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
+++ GHK I L ++P+ + +AT D V +W R D +
Sbjct: 192 QKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIW---------RITLSDSLLASFLRQQE 242
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
+A + + T ++ H+ V + +S D + +++AS DK V+LW T
Sbjct: 243 PINQQAALVLFPQKAFHIEETPFQELY-GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRT 300
Query: 135 HKHKFISSFVGHTNWVRCARMSN-DGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGL 193
+ + F H N+V C + + + AS S D ++W L S E + + D++
Sbjct: 301 GCDQCLHVF-HHNNYVTCVEFNPVNKNNFASGSIDGKARIWGL-SEERVVAWTDVRDSIS 358
Query: 194 HLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSI---HNEAVTQVAIHP-SGSYILTA 249
+++ P+G V GN + Y I ++++ I +T V P S IL +
Sbjct: 359 AISYQPNGNGFVVGCITGNCRFYQILDNDVIMDEQILIRGRNRITAVEFCPGSSEKILVS 418
Query: 250 SKDGKMKILDLLEGHPIFTLSGHNGPVNAVNF-SPTGDTFSSAGDDKLVFIWKTN 303
S+D K++I D + F + G ++ +F S TG S V++W +
Sbjct: 419 SEDSKVRIFDKTQMIHKFKAPSNFGRQSSASFVSSTGKHILSVRRGVGVYLWNND 473
Score = 39.9 bits (89), Expect = 0.008
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 251 KDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTD--LS 308
K K ++L + + ++GH G + + FSP G ++ G+D +V IW+ +D L+
Sbjct: 176 KTNKKSHVELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLA 235
Query: 309 SESKENEGQN 318
S ++ E N
Sbjct: 236 SFLRQQEPIN 245
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 64.9 bits (151), Expect = 2e-10
Identities = 50/238 (21%), Positives = 100/238 (42%), Gaps = 6/238 (2%)
Query: 15 KQLKGHKNAITALYYNP-NDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSS 73
+ L+ H + +T L N+ +A+ L V +WD+ + + +D + +
Sbjct: 120 RTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVT-KPNDANEDSSSNGA 178
Query: 74 SGKYMASASRDKTVRIWV---PTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVK 130
+G + + + I V P+ + + K H ++V ++ + G+ +++ +KV++
Sbjct: 179 NGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLR 238
Query: 131 LWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
+W GHT+ VR + + G S S D +LW+L C+HTY
Sbjct: 239 VWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTD 298
Query: 191 HGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILT 248
LA +PS +V + L D+ T V + Q+A+ + ++ T
Sbjct: 299 SVWALACNPSFSHVYSGGRDQCLYLTDLATRESV-LLCTKEHPIQQLALQDNSIWVAT 355
Score = 55.6 bits (128), Expect = 1e-07
Identities = 48/242 (19%), Positives = 104/242 (42%), Gaps = 9/242 (3%)
Query: 66 VMDVTFSSSGKYMASASRDKTVRIWV--PTVTGSTGMFKAHSQTVRSVQFSSDGSKIITA 123
V+ + S+ Y+ + SRD T++ W T + F++H V + + S +++
Sbjct: 43 VLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGE-STLVSC 101
Query: 124 SDDKVVKLWSTHKHKFISSFVG-HTNWVRC-ARMSNDGSIIASCSDDKSTKLWNLDSGEC 181
S D VK W + + H+++V C A + + +++AS +W++++
Sbjct: 102 SSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALS 161
Query: 182 IHTYKDLKGHGLHLAWHPSGCYVAVAT--SHGNVKLYDIRTHNLVQYYSI-HNEAVTQVA 238
T K + + +G ++ T S N+ + +H + H E+V +A
Sbjct: 162 PVT-KPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALA 220
Query: 239 IHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVF 298
++ +G+ +++ + +++ D G L GH V + TG S D ++
Sbjct: 221 MNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIR 280
Query: 299 IW 300
+W
Sbjct: 281 LW 282
Score = 50.4 bits (115), Expect = 6e-06
Identities = 43/233 (18%), Positives = 100/233 (42%), Gaps = 6/233 (2%)
Query: 33 DQQIATSSLDNSVLLWD-LRGTMRSYRFQGHDEAVMDVTFSS-SGKYMASASRDKTVRIW 90
+ + + S D +V WD L + + + H + V + ++ + +AS V IW
Sbjct: 95 ESTLVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIW 154
Query: 91 VPTVTGSTGMFKAHSQTVRSVQFSSDG--SKIITASDDKVVKLWSTHKHKFISSFV-GHT 147
+ + K + S ++G + + T + + S+ H + + GH
Sbjct: 155 -DIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHK 213
Query: 148 NWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVA 207
V M++ G+++ S +K ++W+ +G + + L +G +
Sbjct: 214 ESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSG 273
Query: 208 TSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDL 260
+S ++L+D+ + Y++H ++V +A +PS S++ + +D + + DL
Sbjct: 274 SSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDL 326
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 64.9 bits (151), Expect = 2e-10
Identities = 50/238 (21%), Positives = 100/238 (42%), Gaps = 6/238 (2%)
Query: 15 KQLKGHKNAITALYYNP-NDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSS 73
+ L+ H + +T L N+ +A+ L V +WD+ + + +D + +
Sbjct: 120 RTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVT-KPNDANEDSSSNGA 178
Query: 74 SGKYMASASRDKTVRIWV---PTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVK 130
+G + + + I V P+ + + K H ++V ++ + G+ +++ +KV++
Sbjct: 179 NGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLR 238
Query: 131 LWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
+W GHT+ VR + + G S S D +LW+L C+HTY
Sbjct: 239 VWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTD 298
Query: 191 HGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILT 248
LA +PS +V + L D+ T V + Q+A+ + ++ T
Sbjct: 299 SVWALACNPSFSHVYSGGRDQCLYLTDLATRESV-LLCTKEHPIQQLALQDNSIWVAT 355
Score = 55.6 bits (128), Expect = 1e-07
Identities = 48/242 (19%), Positives = 104/242 (42%), Gaps = 9/242 (3%)
Query: 66 VMDVTFSSSGKYMASASRDKTVRIWV--PTVTGSTGMFKAHSQTVRSVQFSSDGSKIITA 123
V+ + S+ Y+ + SRD T++ W T + F++H V + + S +++
Sbjct: 43 VLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGE-STLVSC 101
Query: 124 SDDKVVKLWSTHKHKFISSFVG-HTNWVRC-ARMSNDGSIIASCSDDKSTKLWNLDSGEC 181
S D VK W + + H+++V C A + + +++AS +W++++
Sbjct: 102 SSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALS 161
Query: 182 IHTYKDLKGHGLHLAWHPSGCYVAVAT--SHGNVKLYDIRTHNLVQYYSI-HNEAVTQVA 238
T K + + +G ++ T S N+ + +H + H E+V +A
Sbjct: 162 PVT-KPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALA 220
Query: 239 IHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVF 298
++ +G+ +++ + +++ D G L GH V + TG S D ++
Sbjct: 221 MNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIR 280
Query: 299 IW 300
+W
Sbjct: 281 LW 282
Score = 50.4 bits (115), Expect = 6e-06
Identities = 43/233 (18%), Positives = 100/233 (42%), Gaps = 6/233 (2%)
Query: 33 DQQIATSSLDNSVLLWD-LRGTMRSYRFQGHDEAVMDVTFSS-SGKYMASASRDKTVRIW 90
+ + + S D +V WD L + + + H + V + ++ + +AS V IW
Sbjct: 95 ESTLVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIW 154
Query: 91 VPTVTGSTGMFKAHSQTVRSVQFSSDG--SKIITASDDKVVKLWSTHKHKFISSFV-GHT 147
+ + K + S ++G + + T + + S+ H + + GH
Sbjct: 155 -DIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHK 213
Query: 148 NWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVA 207
V M++ G+++ S +K ++W+ +G + + L +G +
Sbjct: 214 ESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSG 273
Query: 208 TSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDL 260
+S ++L+D+ + Y++H ++V +A +PS S++ + +D + + DL
Sbjct: 274 SSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDL 326
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 64.5 bits (150), Expect = 3e-10
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
K+L+GH+NA+ + + + + T S D V +W + +GH+ + D+ SS+
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSN 298
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFS-SDGS--KIITASDDKVVKL 131
++ASAS D +R+W + + H+ V ++ FS GS +++++SDD ++
Sbjct: 299 NIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRI 358
Query: 132 WSTHKHKF 139
W +F
Sbjct: 359 WDARGAQF 366
Score = 57.2 bits (132), Expect = 5e-08
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 136 KHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHL 195
K + I GH N V CA + G + + SDD+ K+W++D+ C+ + + +G L
Sbjct: 234 KMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDL 293
Query: 196 AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHP---SGSYILTASKD 252
A + ++A A++ ++++ + V H AVT +A P S +L++S D
Sbjct: 294 AVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDD 353
Query: 253 GKMKILD 259
G +I D
Sbjct: 354 GTCRIWD 360
Score = 56.8 bits (131), Expect = 6e-08
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 58 RFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
R +GH AV SG+Y+ + S D+ V++W + H + + SS+
Sbjct: 240 RLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNN 299
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMS-NDGS--IIASCSDDKSTKLW 174
I +AS+D V+++W +S GHT V S GS + S SDD + ++W
Sbjct: 300 IFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
Query: 175 N 175
+
Sbjct: 360 D 360
Score = 52.0 bits (119), Expect = 2e-06
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 200 SGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILD 259
SG YV + VK++ + T + H +T +A+ + +I +AS D +++
Sbjct: 256 SGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWR 315
Query: 260 LLEGHPIFTLSGHNGPVNAVNFSP-TGDTFS--SAGDDKLVFIW 300
L +G P+ L GH G V A+ FSP G + S+ DD IW
Sbjct: 316 LPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
Score = 51.2 bits (117), Expect = 3e-06
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 102 KAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSI 161
+ H V G +IT SDD++VK+WS ++S GH + +S++
Sbjct: 242 RGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIF 301
Query: 162 IASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAW--HPSGCYVAVATS-HGNVKLYDI 218
IAS S+D ++W L G + + G +A+ P Y +++S G +++D
Sbjct: 302 IASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDA 361
Query: 219 R 219
R
Sbjct: 362 R 362
Score = 39.5 bits (88), Expect = 0.010
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 230 HNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFS 289
H AV + SG Y++T S D +K+ + + + + GH G + + S +
Sbjct: 244 HRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIA 303
Query: 290 SAGDDKLVFIWK 301
SA +D ++ +W+
Sbjct: 304 SASNDCVIRVWR 315
Score = 33.9 bits (74), Expect = 0.52
Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Query: 156 SNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSH-GNVK 214
S D + + D +WN G +H+ + HP +A++ + G
Sbjct: 553 SLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMSAGYDGKTI 612
Query: 215 LYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEG 263
++DI +Q Y I + + P G+ I+ + G++ IL +G
Sbjct: 613 VWDIWEGIPIQIYDISHYKLVDGKFSPDGTSIILSDDVGQLYILSTGQG 661
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 64.1 bits (149), Expect = 4e-10
Identities = 43/182 (23%), Positives = 92/182 (50%), Gaps = 9/182 (4%)
Query: 1 MMEDKVTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQ 60
+++ + T E + K LKGHK+ I L ++ +++++A+ DN + +W+ T RF
Sbjct: 273 ILQRDIRTQEDHVSK-LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFC 331
Query: 61 GHDEAVMDVTFSSSG-KYMAS--ASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
H AV + +S +AS + D+ +R W T +SQ V ++ +S +
Sbjct: 332 EHAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQ-VCNLVWSKNV 390
Query: 118 SKIITA---SDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLW 174
+++++ S ++++ +W +++ GH+ V +S DG I + + D++ + W
Sbjct: 391 NELVSTHGYSQNQII-VWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFW 449
Query: 175 NL 176
N+
Sbjct: 450 NV 451
Score = 56.8 bits (131), Expect = 6e-08
Identities = 63/289 (21%), Positives = 122/289 (42%), Gaps = 11/289 (3%)
Query: 34 QQIATSSLDNSVLLWDLRGTMRSYRFQ-GHDEAVMDVTFSSSGKYMASASRDKTVRIWVP 92
Q + L N V LW+ + + G DE V V ++ G ++A + TV+IW
Sbjct: 179 QNVLAVGLGNCVYLWNACSSKVTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDV 238
Query: 93 TVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDK-VVKLWSTHKHKFISSFVGHTNWVR 151
+ + H V ++ +SS S + + S DK +++ + +S GH + +
Sbjct: 239 LRCKNIRTMEGHRLRVGALAWSS--SVLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEIC 296
Query: 152 CARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVA---T 208
+ S+D +AS +D +WN S + + + + +AW P + + T
Sbjct: 297 GLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGT 356
Query: 209 SHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTAS-KDGKMKILDLLEGHPIF 267
+ ++ ++ T+ + +++ V + T ++ + +
Sbjct: 357 ADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLA 416
Query: 268 TLSGHNGPVNAVNFSPTGDTF-SSAGDDKLVFIWKTNFTDLSSESKENE 315
TL+GH+ V + SP G T + AGD+ L F W F S+S+E+E
Sbjct: 417 TLTGHSYRVLYLAVSPDGQTIVTGAGDETLRF-WNV-FPSPKSQSRESE 463
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 64.1 bits (149), Expect = 4e-10
Identities = 30/74 (40%), Positives = 46/74 (62%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
L+GH + L ++P+D +A+ SLDN+V +W++R M + +GH V VT+ G
Sbjct: 114 LRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGS 173
Query: 77 YMASASRDKTVRIW 90
++AS S DKTV IW
Sbjct: 174 FIASQSDDKTVIIW 187
Score = 52.8 bits (121), Expect = 1e-06
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 60 QGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK 119
+GH V+D+ +S +AS S D TV IW T + + H V+ V + GS
Sbjct: 115 RGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSF 174
Query: 120 IITASDDKVVKLWST 134
I + SDDK V +W T
Sbjct: 175 IASQSDDKTVIIWRT 189
Score = 48.4 bits (110), Expect = 2e-05
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 29/215 (13%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRF----QGHDEAVMDVTFSSSGKYMA 79
I ++ PN ++ AT D+ + DL+ R + H +V V ++ + +Y+A
Sbjct: 16 IFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWAKNSRYVA 75
Query: 80 SASRDKTVRIWVPTVTGSTGMF-----------------KAHSQTVRSVQFSSDGSKIIT 122
S S D+ ++I T F + H+ V + +S D S + +
Sbjct: 76 SGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLNWSPDDSMLAS 135
Query: 123 ASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECI 182
S D V +W+ + GH + V+ GS IAS SDDK+ +W
Sbjct: 136 GSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMA 195
Query: 183 HTYKDLKGHGL------HLAWHPSGCYVAVATSHG 211
H L L W P G + + T+HG
Sbjct: 196 HRTDGHWAKSLGSTFFRRLGWSPCGHF--LTTTHG 228
Score = 46.8 bits (106), Expect = 7e-05
Identities = 27/96 (28%), Positives = 40/96 (41%)
Query: 208 TSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIF 267
T G+ + D+ V H V + P S + + S D + I ++ G
Sbjct: 95 TEFGSGEAPDVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTT 154
Query: 268 TLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
L GH V V + P G +S DDK V IW+T+
Sbjct: 155 VLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTS 190
Score = 40.7 bits (91), Expect = 0.005
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 10/155 (6%)
Query: 138 KFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAW 197
K + + GHT V S D S++AS S D + +WN+ +G C + + W
Sbjct: 109 KAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTW 168
Query: 198 HPSGCYVAVATSHGNVKLYDI----RTHNLVQYY--SIHNEAVTQVAIHPSGSYILTASK 251
P G ++A + V ++ H ++ S+ + ++ P G ++ T
Sbjct: 169 DPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTFFRRLGWSPCGHFLTTTHG 228
Query: 252 DGKMK----ILDLLEGHPIFTLSGHNGPVNAVNFS 282
K K +L+ E + GH+ P+ V F+
Sbjct: 229 FQKPKHSAPVLERGEWSVAYDFLGHSAPIIVVRFN 263
Score = 37.1 bits (82), Expect = 0.056
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 22/210 (10%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTF----- 71
L+GH + + + ++P IA+ S D +V++W ++R GH + TF
Sbjct: 156 LRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTFFRRLG 215
Query: 72 -SSSGKYMASASRDKTVRIWVPTV-TGSTGM---FKAHSQTVRSVQFSSDGSKIITASDD 126
S G ++ + + + P + G + F HS + V+F+ K I +
Sbjct: 216 WSPCGHFLTTTHGFQKPKHSAPVLERGEWSVAYDFLGHSAPIIVVRFNHSMFKRIPS--- 272
Query: 127 KVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYK 186
STH+ K + G + + ++IA S D++ +W S + K
Sbjct: 273 ------STHETKQVGWSNGTSK--SGEKDLQSYNVIAMGSQDRTITVWTTGSARPLFVAK 324
Query: 187 DLKGHG-LHLAWHPSGCYVAVATSHGNVKL 215
G + L+W P G + + G V +
Sbjct: 325 HFFGQSVVDLSWSPDGYSLFACSLDGTVAM 354
Score = 35.9 bits (79), Expect = 0.13
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 17/134 (12%)
Query: 136 KHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWN---------LDSGEC--IHT 184
K + +++ H V C R + + +AS SDD+ ++ SGE +
Sbjct: 48 KERLLATLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVEN 107
Query: 185 YK---DLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVA 238
+K L+GH + L W P +A + V ++++RT H V V
Sbjct: 108 WKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVT 167
Query: 239 IHPSGSYILTASKD 252
P GS+I + S D
Sbjct: 168 WDPIGSFIASQSDD 181
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 63.7 bits (148), Expect = 6e-10
Identities = 79/301 (26%), Positives = 135/301 (44%), Gaps = 31/301 (10%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDL-RGTMRSYRFQ----GHDEAVM 67
L+ +L GH + + + ND+ IATSS D ++ +W L R Y + GH V
Sbjct: 12 LRCELHGHDDDVRGICVC-NDENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVG 70
Query: 68 DVTF-SSSGKY----MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIIT 122
+ + + +Y + S S D V +W + K H V V + D I++
Sbjct: 71 PLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGV--AIDNEDIVS 128
Query: 123 ASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECI 182
+S D+ +K W + + S+ H + ++ G ++ S S D S KLW G+
Sbjct: 129 SSVDQTLKRW--RNGQLVESWDAHQSPIQAVIRLPSGELV-SGSSDASLKLW---KGKT- 181
Query: 183 HTYKDLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAI 239
+ + L GH LA P +++ A+ G+++L+ + L++ H V V
Sbjct: 182 -SLQTLSGHTDTVRGLAVMPDLGFLS-ASHDGSIRLWALSGEVLLEMVG-HTSLVYSVDA 238
Query: 240 HPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFI 299
H SG I++AS+D KI +G + +L H G + F TGD ++ D +V +
Sbjct: 239 HSSG-LIVSASEDRHAKIWK--DGVCVQSLE-HPGCIWDAKFLETGDIVTACSDG-VVRV 293
Query: 300 W 300
W
Sbjct: 294 W 294
Score = 50.0 bits (114), Expect = 7e-06
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
L GH + + L P D ++S D S+ LW L G + GH V V SSG
Sbjct: 186 LSGHTDTVRGLAVMP-DLGFLSASHDGSIRLWALSGEVL-LEMVGHTSLVYSVDAHSSG- 242
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
+ SAS D+ +IW V + H + +F G I+TA D VV++W T +
Sbjct: 243 LIVSASEDRHAKIWKDGVCVQS---LEHPGCIWDAKFLETGD-IVTACSDGVVRVW-TVR 297
Query: 137 HKFIS 141
H I+
Sbjct: 298 HDAIA 302
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 63.7 bits (148), Expect = 6e-10
Identities = 79/301 (26%), Positives = 135/301 (44%), Gaps = 31/301 (10%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDL-RGTMRSYRFQ----GHDEAVM 67
L+ +L GH + + + ND+ IATSS D ++ +W L R Y + GH V
Sbjct: 12 LRCELHGHDDDVRGICVC-NDENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVG 70
Query: 68 DVTF-SSSGKY----MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIIT 122
+ + + +Y + S S D V +W + K H V V + D I++
Sbjct: 71 PLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGV--AIDNEDIVS 128
Query: 123 ASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECI 182
+S D+ +K W + + S+ H + ++ G ++ S S D S KLW G+
Sbjct: 129 SSVDQTLKRW--RNGQLVESWDAHQSPIQAVIRLPSGELV-SGSSDASLKLW---KGKT- 181
Query: 183 HTYKDLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAI 239
+ + L GH LA P +++ A+ G+++L+ + L++ H V V
Sbjct: 182 -SLQTLSGHTDTVRGLAVMPDLGFLS-ASHDGSIRLWALSGEVLLEMVG-HTSLVYSVDA 238
Query: 240 HPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFI 299
H SG I++AS+D KI +G + +L H G + F TGD ++ D +V +
Sbjct: 239 HSSG-LIVSASEDRHAKIWK--DGVCVQSLE-HPGCIWDAKFLETGDIVTACSDG-VVRV 293
Query: 300 W 300
W
Sbjct: 294 W 294
Score = 50.0 bits (114), Expect = 7e-06
Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
L GH + + L P D ++S D S+ LW L G + GH V V SSG
Sbjct: 186 LSGHTDTVRGLAVMP-DLGFLSASHDGSIRLWALSGEVL-LEMVGHTSLVYSVDAHSSG- 242
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
+ SAS D+ +IW V + H + +F G I+TA D VV++W T +
Sbjct: 243 LIVSASEDRHAKIWKDGVCVQS---LEHPGCIWDAKFLETGD-IVTACSDGVVRVW-TVR 297
Query: 137 HKFIS 141
H I+
Sbjct: 298 HDAIA 302
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 63.7 bits (148), Expect = 6e-10
Identities = 61/285 (21%), Positives = 117/285 (41%), Gaps = 16/285 (5%)
Query: 14 KKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLR-GTMRSYRFQGHDEAVMDVTFS 72
+++++ HK + A+ + + Q+I T+S D S+L D+ G ++ H++AV + +
Sbjct: 44 ERKVRAHKESCRAVRFIDDGQRIVTASADCSILATDVETGAQVAHLENAHEDAV-NTLIN 102
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
+ +AS V+IW + F AH + + F+SD K++ S D + +
Sbjct: 103 VTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVC 162
Query: 133 STHKHKFIS-SFVGHTNWVRCARMSNDGSIIASCSDDKSTKL---WNLDSGECIHTYKDL 188
+ K S S + M N +I C T L W +C + DL
Sbjct: 163 NLRTSKVQSQSEFSEDELLSVVIMKNGRKVI--CGTQNGTLLLYSWGFFK-DCSDRFVDL 219
Query: 189 KGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILT 248
+ + + +G + L I + ++Q H+ + +A+ ++ +
Sbjct: 220 APNSVDALLKLDEDRLITGCDNGIISLVGILPNRIIQPIGSHDYPIEDLALSHDKKFLGS 279
Query: 249 ASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGD 293
+ D +K+ +L E L G N VN+ N S + S D
Sbjct: 280 TAHDSMLKLWNLEE-----ILEGSN--VNSGNASGAAEDSDSDND 317
Score = 43.6 bits (98), Expect = 6e-04
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 187 DLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHN-LVQYYSI--HNEAVTQVAIHPSG 243
DL + + +HPS VA G++ LY + + LV+ + H E+ V G
Sbjct: 4 DLGANAFGIDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFIDDG 63
Query: 244 SYILTASKDGKMKILDLLEGHPIFTL-SGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKT 302
I+TAS D + D+ G + L + H VN + + T T +S D V IW T
Sbjct: 64 QRIVTASADCSILATDVETGAQVAHLENAHEDAVNTL-INVTETTIASGDDKGCVKIWDT 122
Query: 303 NFTDLSSESKENEGQNMITGQRHLTEEGIDTITE-NGQIQDVNILSKK 349
S E N ++ I+G ++ +T +G + N+ + K
Sbjct: 123 RQRSCSHEF--NAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSK 168
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 62.9 bits (146), Expect = 1e-09
Identities = 73/295 (24%), Positives = 134/295 (45%), Gaps = 36/295 (12%)
Query: 17 LKGHKNAITAL-YYNPNDQQ---IATSSLDNSVLLW--------DLRGTMRSYRF-QGHD 63
L+GH AI+++ N ND + +AT+S D ++ L+ D +R+Y+ +GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 64 EAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITA 123
+V V+ SG + S+S D T+ +W + S G S +V+ + ++ +
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWNTNESTSEG----ESVSVKKRKGNNQAEE---- 257
Query: 124 SDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIH 183
S + + ++S VGHT V + + +I S S D S + W++++G+
Sbjct: 258 ---------SQSEGEAVTSLVGHTQCVSSV-VWPEHDVIYSSSWDHSVRRWDVETGKDSL 307
Query: 184 TYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIR---THNLVQYYSIHNEAVTQVAIH 240
K S +A S ++++D R T V +S H+ ++ H
Sbjct: 308 NLFCGKALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWH 367
Query: 241 PSGSY-ILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDD 294
S + +L+AS DGK+ + DL P+ + HN V + ++ G++ S G D
Sbjct: 368 KSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADWW-KGESVVSGGAD 421
Score = 35.9 bits (79), Expect = 0.13
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 62 HDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQF--SSDGSK 119
HD+ V V SS +++ + D R+W + + + + HS + SV S+D
Sbjct: 109 HDDWVSAVN-GSSPRFILTGCYDGLGRVW-SSAGSCSHILEGHSGAISSVALVNSNDAET 166
Query: 120 II--TASDDKVVKLW---------STHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDD 168
+ TAS D+ ++L+ ST K + GH V+ G+++ S S D
Sbjct: 167 VTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWD 226
Query: 169 KSTKLWN 175
+ LWN
Sbjct: 227 CTINLWN 233
Score = 31.1 bits (67), Expect = 3.7
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 16 QLKGHKNAITALYYNPNDQ-QIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
Q H + I+A ++ + + ++S D ++LWDLR H++ V+ +
Sbjct: 353 QFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WK 411
Query: 75 GKYMASASRDKTVRI 89
G+ + S D +RI
Sbjct: 412 GESVVSGGADSNLRI 426
Score = 30.3 bits (65), Expect = 6.4
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 16/105 (15%)
Query: 230 HNEAVTQVAIHPSGSY----ILTASKDGKMKIL--DLLEGHPIFT-------LSGHNGPV 276
H+ A++ VA+ S + TASKD +++ D E T L GH V
Sbjct: 149 HSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASV 208
Query: 277 NAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSES---KENEGQN 318
+V+ +G+ S+ D + +W TN + ES K+ +G N
Sbjct: 209 QSVSAQKSGNMVCSSSWDCTINLWNTNESTSEGESVSVKKRKGNN 253
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 62.9 bits (146), Expect = 1e-09
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Query: 62 HDEAVMDVTFSSSGKYMASASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSSDGSKI 120
H +AV + S G + SAS D++ +IW + KAH + ++ S DG +
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGF-V 249
Query: 121 ITASDDKVVKLWS--THKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLW 174
T S DK +K+W+ KH +++ H + V +S DG ++ S + D+S +W
Sbjct: 250 YTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVW 305
Score = 52.4 bits (120), Expect = 1e-06
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 26/193 (13%)
Query: 7 TTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSY--RFQGHDE 64
T+ CL K H +AI A+ + D + T S D + +W+ + S H
Sbjct: 221 TSDFKCLDSIEKAHDDAINAIVVS-KDGFVYTGSADKKIKVWNKKDKKHSLVATLTKHLS 279
Query: 65 AVMDVTFSSSGKYMASASRDKTVRIWVPTVTGS--------TGMFKAHSQTVRSVQFSSD 116
AV + S GK + S + D+++ +W + G G + H + + + +SD
Sbjct: 280 AVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAVASD 339
Query: 117 GSKIITASDDKVVKLW-----STHKHKFISSFVGHTNWVRCARMS---NDGSIIASC--- 165
+++ S DK +++W + ++ GHT V+ +S +D + SC
Sbjct: 340 --LVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSDSDSNSDYSCMVY 397
Query: 166 --SDDKSTKLWNL 176
S D S K+WNL
Sbjct: 398 SGSLDLSLKVWNL 410
Score = 52.0 bits (119), Expect = 2e-06
Identities = 49/237 (20%), Positives = 101/237 (42%), Gaps = 19/237 (8%)
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
G + SA +D +R+W + + + V ++ +D K + +S V
Sbjct: 127 GDKLISAHQDHKIRVW--KIIDESNRRGQKYKCVATLPTMNDRFKTLFSSKSYV----EV 180
Query: 135 HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH 194
+HK + +V H + V +S DGS++ S S D+S K+W +C+ + + ++
Sbjct: 181 RRHKKCT-WVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAIN 239
Query: 195 LAWHPSGCYVAVATSHGNVKLYD--IRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKD 252
+V ++ +K+++ + H+LV + H AV +AI G + + + D
Sbjct: 240 AIVVSKDGFVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACD 299
Query: 253 GKMKILD-LLEGHP-------IFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
+ + + L+ G + L GH + + + D S DK + +W+
Sbjct: 300 RSILVWERLINGDDEELHMSVVGALRGHRKAIMCL--AVASDLVLSGSADKSLRVWR 354
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 62.5 bits (145), Expect = 1e-09
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 16 QLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS--- 72
+L GHK+ + L ++ +D+++A+ DN +L+W+ + H AV +T+S
Sbjct: 293 KLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQ 352
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS--DDKVVK 130
SS + D+ +R W T SQ V ++ +S + ++I++ +
Sbjct: 353 SSLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQ-VCNLAWSKNVNEIVSTHGYSQNQIM 411
Query: 131 LWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNL 176
LW +++ GH+ V S DG I + + D++ + WN+
Sbjct: 412 LWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 43.2 bits (97), Expect = 9e-04
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 15/277 (5%)
Query: 32 NDQQIATSSLDNSVLLWDLRGTMRSYRFQ-GHDEAVMDVTFSSSGKYMASASRDKTVRIW 90
+ Q + L V LW + + G +++V V ++ G Y++ + V++W
Sbjct: 183 SSQNVLAVGLGTCVYLWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVW 242
Query: 91 VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS--DDKVVKLWSTHKHKFISSFVGHTN 148
T H + ++S +I+++ D +++ + F+S VGH +
Sbjct: 243 DGTQCKRVRTMGGHQTRTGVLAWNS---RILSSGSRDRNILQHDIRVQSDFVSKLVGHKS 299
Query: 149 WVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVAT 208
V + S+D +AS +D +WN S + I + + W P ++
Sbjct: 300 EVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPH--QSSLLA 357
Query: 209 SHGNVKLYDIRTHNLVQYYSIHN-EAVTQVA-IHPSGSYILTASKDGKMKILDLLEGHP- 265
S G IR N +++ + +QV + S + S G + +L +P
Sbjct: 358 SGGGTADRCIRFWNTTNGNQLNSIDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPS 417
Query: 266 ---IFTLSGHNGPVNAVNFSPTGDTF-SSAGDDKLVF 298
+ TL+GH+ V + SP G T + AGD+ L F
Sbjct: 418 MSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRF 454
Score = 40.7 bits (91), Expect = 0.005
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 197 WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTA-SKDGKM 255
W G Y+++ TSHG V+++D V+ H T+ + S IL++ S+D +
Sbjct: 223 WTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQ---TRTGVLAWNSRILSSGSRDRNI 279
Query: 256 KILDL-LEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
D+ ++ + L GH V + +S +S G+D + +W +
Sbjct: 280 LQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNH 328
Score = 35.5 bits (78), Expect = 0.17
Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 14/190 (7%)
Query: 129 VKLWSTHKHKFISSF-VGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKD 187
V LW+ K +G + V + + +GS I+ + ++W D +C +
Sbjct: 196 VYLWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVW--DGTQCKRV-RT 252
Query: 188 LKGHGLH---LAWHPSGCYVAVATSHGNVKLYDIRTHN-LVQYYSIHNEAVTQVAIHPSG 243
+ GH LAW+ ++ + N+ +DIR + V H V +
Sbjct: 253 MGGHQTRTGVLAWNSR--ILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDD 310
Query: 244 SYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGD---DKLVFIW 300
+ + D ++ + + PI L+ H V A+ +SP + ++G D+ + W
Sbjct: 311 RELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFW 370
Query: 301 K-TNFTDLSS 309
TN L+S
Sbjct: 371 NTTNGNQLNS 380
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 62.5 bits (145), Expect = 1e-09
Identities = 50/252 (19%), Positives = 108/252 (42%), Gaps = 17/252 (6%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS------ 72
G K AL + + + +A ++ ++DL+ + + H+ + ++FS
Sbjct: 383 GSKFGFRALAVSEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFSFPVLTN 442
Query: 73 ----SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKV 128
++ +AS + + + I+ S V SV+F+ +G K++T+ D++
Sbjct: 443 VDSENASSLLASGGKGRAIHIYDVKRNFDPVGSVCGSAAVTSVKFACNGRKMLTSGADRL 502
Query: 129 VKLWSTHKHKFISSFVGHTNWVRCARMSN-----DGSIIASCSDDKSTKLWNLDSGECIH 183
K + HT + + + ++ + DK +++++SG+ +
Sbjct: 503 QMFDVNRKASSVRLSPSHTQTLSHGTIYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVR 562
Query: 184 TYKDLKGHG--LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHP 241
++K + HG + + PS Y+ + S+ + D T LV + H EAVT V P
Sbjct: 563 SFKQDRDHGDPVKVILDPSCNYLVCSYSNRTICFVDFVTGELVAQATGHGEAVTGVIFLP 622
Query: 242 SGSYILTASKDG 253
+I++ + DG
Sbjct: 623 DCKHIISVASDG 634
Score = 44.4 bits (100), Expect = 4e-04
Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 23/250 (9%)
Query: 72 SSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFS--------SDGSKIITA 123
S GKY+A+ + I+ + T AH ++S+ FS S+ + + A
Sbjct: 394 SEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFSFPVLTNVDSENASSLLA 453
Query: 124 SDDK--VVKLWSTHKHKF--ISSFVGHTNWVRCARMSNDGSIIASCSD-----DKSTKLW 174
S K + ++ K F + S G N ++ S +D D + K
Sbjct: 454 SGGKGRAIHIYDV-KRNFDPVGSVCGSAAVTSVKFACNGRKMLTSGADRLQMFDVNRKAS 512
Query: 175 NLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSI---HN 231
++ HT G +A P+ V + ++DI + LV+ + H
Sbjct: 513 SVRLSPS-HTQTLSHGTIYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFKQDRDHG 571
Query: 232 EAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSA 291
+ V +V + PS +Y++ + + + +D + G + +GH V V F P S
Sbjct: 572 DPV-KVILDPSCNYLVCSYSNRTICFVDFVTGELVAQATGHGEAVTGVIFLPDCKHIISV 630
Query: 292 GDDKLVFIWK 301
D +F+WK
Sbjct: 631 ASDGCIFVWK 640
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 60.5 bits (140), Expect = 5e-09
Identities = 59/264 (22%), Positives = 121/264 (45%), Gaps = 24/264 (9%)
Query: 154 RMSNDGSIIASCSDDKST-----------KLWNLDSGECIHTYKDLKGHGLHLAWHPSGC 202
R ++DG +I D +T K+W+ E + + D+ + + +H
Sbjct: 470 RYAHDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRE-LKSQWDVGCSLVKIVYHRVNG 528
Query: 203 YVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLE 262
+A ++LYD+ T +V+ + H + +T + G +++++S DG ++I D++
Sbjct: 529 LLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVIL 588
Query: 263 GHPIFTLSGHNGPVNAVNFSPTGDTFSSA-GDDKLVFIW--KTNFTDLSSESKENEGQNM 319
I + + P+ A++ SP D ++A D V++W ++ F+ L S G+++
Sbjct: 589 AKQIDGVH-VDVPITALSLSPNMDVLATAHSDQNGVYLWVNQSMFSGLPSVESYASGKDV 647
Query: 320 ITGQRHLTEEGIDTITENGQIQDVNIL-SKKALDYDLRDISEGSLPEDF---VKDPSKLE 375
+ + L T +E D +L + +AL IS+ +PE + S+ +
Sbjct: 648 VNVK--LPSVSALTSSEADDDMDRQVLENSEALQASSFSISQKQIPELVTLSLLPKSQWQ 705
Query: 376 SPVVVQIQKIRN--VSAPKANEES 397
S + + I K RN + PK E++
Sbjct: 706 SLINLDIIKARNKPIEPPKKPEKA 729
Score = 49.6 bits (113), Expect = 1e-05
Identities = 29/119 (24%), Positives = 64/119 (53%), Gaps = 6/119 (5%)
Query: 21 KNAITALYYNPNDQQIATSSLDNSVL-LWDL-RGTMRSYRFQGHDEAVMDVTFSSSGKYM 78
+ A+TAL ++ + + + S V+ +W+L + ++S HD +++ + F ++ +
Sbjct: 224 RGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVL 283
Query: 79 ASASRDKTVRIWV-PTVTGSTGMFK---AHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
SAS D ++++W+ T G + + HS ++F S+G I++A D+ +L+S
Sbjct: 284 MSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLFS 342
Score = 49.2 bits (112), Expect = 1e-05
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 54 MRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQF 113
M R HD V+ V S+ M SA +++W + V+ V
Sbjct: 465 MSEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIVYH 524
Query: 114 SSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKL 173
+G + T +DD V++L+ K + F GHT+ + S DG + S S D S ++
Sbjct: 525 RVNGL-LATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRI 583
Query: 174 WNL 176
W++
Sbjct: 584 WDV 586
Score = 46.0 bits (104), Expect = 1e-04
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 9/186 (4%)
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIA-SCSDDKSTKLWNL 176
+K++ S + ++LW+ + K + F G + V S ++A C+D K + N+
Sbjct: 152 NKVLVGSQEGPLQLWNINTKKMLYQFKGWGSSVTSCVSSPALDVVAIGCADGK-IHVHNI 210
Query: 177 DSGECIHTYKDL-KGHGLHLAWHPSGC-YVAVATSHGNVKLYDIRTHNLVQYY-SIHNEA 233
E I T++ +G L++ G +A S G + ++++ L H+ +
Sbjct: 211 KLDEEIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSS 270
Query: 234 VTQVAIHPSGSYILTASKDGKMK--ILDLLEGHP--IFTLSGHNGPVNAVNFSPTGDTFS 289
+ + + +++AS D +K I D +G P + SGH+ P + F G
Sbjct: 271 IISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRHIL 330
Query: 290 SAGDDK 295
SAG D+
Sbjct: 331 SAGQDR 336
Score = 44.0 bits (99), Expect = 5e-04
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 14 KKQLKGHKN---AITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT 70
K++LK + ++ + Y+ + +AT + D + L+D+ F+GH + + D+
Sbjct: 505 KRELKSQWDVGCSLVKIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLC 564
Query: 71 FSSSGKYMASASRDKTVRIW 90
FS GK++ S+S D ++RIW
Sbjct: 565 FSEDGKWVISSSMDGSLRIW 584
Score = 43.2 bits (97), Expect = 9e-04
Identities = 35/168 (20%), Positives = 77/168 (45%), Gaps = 7/168 (4%)
Query: 16 QLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDE-AVMDVTFSSS 74
Q KG +++T+ +P +A D + + +++ F+ AV ++FS+
Sbjct: 176 QFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFEHASRGAVTALSFSTD 235
Query: 75 GK-YMASASRDKTVRIWVPTVTGSTGMFK-AHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
G+ +AS + IW + + AH ++ S+ F ++ +++AS D +K+W
Sbjct: 236 GRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMW 295
Query: 133 STHKH----KFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNL 176
+ + + GH+ C R ++G I S D++ +L+++
Sbjct: 296 IFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLFSV 343
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/168 (19%), Positives = 71/168 (42%), Gaps = 3/168 (1%)
Query: 16 QLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSG 75
QL G + ++ + ++ S + + LW++ Y+F+G +V S +
Sbjct: 134 QLTGKFTPTSIVHPDTYLNKVLVGSQEGPLQLWNINTKKMLYQFKGWGSSVTSCVSSPAL 193
Query: 76 KYMASASRDKTVRIWVPTVTGSTGMFKAHSQ-TVRSVQFSSDGSKIITASDD-KVVKLWS 133
+A D + + + F+ S+ V ++ FS+DG ++ + V+ +W+
Sbjct: 194 DVVAIGCADGKIHVHNIKLDEEIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWN 253
Query: 134 THKHKFISSF-VGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGE 180
+K + S H + + + ++ S S D S K+W D+ +
Sbjct: 254 LNKKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDTND 301
Score = 34.7 bits (76), Expect = 0.30
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQG-H-DEAVMDVTFS 72
++ +GH + IT L ++ + + + +SS+D S+ +WD+ + + + G H D + ++ S
Sbjct: 551 REFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDV---ILAKQIDGVHVDVPITALSLS 607
Query: 73 SSGKYMASASRDKT-VRIWV 91
+ +A+A D+ V +WV
Sbjct: 608 PNMDVLATAHSDQNGVYLWV 627
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 60.1 bits (139), Expect = 7e-09
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 57 YRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSS- 115
Y F+GH V+D+++S Y+ SAS DKTVR+W G+F AH+ V SVQF+
Sbjct: 322 YEFRGHTGEVLDISWSKDN-YLLSASMDKTVRLWKVGSNDCLGVF-AHNSYVTSVQFNPV 379
Query: 116 DGSKIITASDDKVVKLWSTHKHKFIS-SFVGHTNWVRCARMSNDGSIIASCSD-----DK 169
+ + ++ S D V++W+ + + + C R G II S + +
Sbjct: 380 NENYFMSGSIDGKVRIWNISGCSVVDWADLKDIISAVCYRPDGQGGIIGSLNGSCRFFNM 439
Query: 170 STKLWNLDSGECIHTYKDLKGHGL----HLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQ 225
S + LDS +H K + L P+ V A S K+ ++ +N+V+
Sbjct: 440 SGEFLELDSQIHLHNKKKSSNKRITGFQFLPQEPTKVLVVSADS----KVRILQGNNVVR 495
Query: 226 YYS--IHNEAVTQVAIHPSGSYILTASKDGKMKI 257
Y ++T ++ G +I++A +D + I
Sbjct: 496 KYKGVCKTRSLTSASLTSDGKHIVSACEDSNVYI 529
Score = 39.1 bits (87), Expect = 0.014
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 49 DLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW 90
+L +S + HD A++ + FS+ GK++AS+ D VR+W
Sbjct: 207 ELSALYQSQDIKAHDGAILAMKFSNDGKFLASSGEDGIVRVW 248
Score = 34.3 bits (75), Expect = 0.39
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 13 LKKQLKGHKNAITALYYNPNDQ-QIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTF 71
L + K IT + P + ++ S D+ V + +R Y+ ++ +
Sbjct: 452 LHNKKKSSNKRITGFQFLPQEPTKVLVVSADSKVRILQGNNVVRKYKGVCKTRSLTSASL 511
Query: 72 SSSGKYMASASRDKTVRIW 90
+S GK++ SA D V IW
Sbjct: 512 TSDGKHIVSACEDSNVYIW 530
Score = 32.7 bits (71), Expect = 1.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 269 LSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
+ H+G + A+ FS G +S+G+D +V +WK
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVWK 249
Score = 32.7 bits (71), Expect = 1.2
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 102 KAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHK 138
KAH + +++FS+DG + ++ +D +V++W + K
Sbjct: 218 KAHDGAILAMKFSNDGKFLASSGEDGIVRVWKVVEDK 254
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 60.1 bits (139), Expect = 7e-09
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSN-DGSIIASCSDDKSTKLWNL 176
S++ +++ + VV++W +++ ++ H V S+ D +++AS SDD S KLW++
Sbjct: 547 SQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSI 606
Query: 177 DSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSI-HNEAVT 235
+ G I T K +G +A ++ V YD+R L I H++ V+
Sbjct: 607 NQGVSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVS 666
Query: 236 QVAIHPSGSYILTASKDGKMKILDL------LEGHPIFTLSGHNGPVNAVNFSPTGDTFS 289
V S S ++++S D +K+ DL + P+ + GH N V S + +
Sbjct: 667 YVRFVDS-STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIA 725
Query: 290 SAGDDKLVFIWKTNF 304
+ + VF++ F
Sbjct: 726 TGSETNEVFVYHKAF 740
Score = 58.4 bits (135), Expect = 2e-08
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 35 QIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSG-KYMASASRDKTVRIWVPT 93
Q+A+S+ + V +WD+ + H++ V + +SS+ +AS S D +V++W
Sbjct: 548 QVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN 607
Query: 94 VTGSTGMFKAHSQTVRSVQFSSD-GSKIITASDDKVVKLWSTHKHKF-ISSFVGHTNWVR 151
S G K + + VQF S+ G + S D V + K + + +GH V
Sbjct: 608 QGVSIGTIKTKA-NICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVS 666
Query: 152 CARMSNDGSIIASCSDDKSTKLWNL 176
R D S + S S D + KLW+L
Sbjct: 667 YVRFV-DSSTLVSSSTDNTLKLWDL 690
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 60.1 bits (139), Expect = 7e-09
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSN-DGSIIASCSDDKSTKLWNL 176
S++ +++ + VV++W +++ ++ H V S+ D +++AS SDD S KLW++
Sbjct: 547 SQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSI 606
Query: 177 DSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSI-HNEAVT 235
+ G I T K +G +A ++ V YD+R L I H++ V+
Sbjct: 607 NQGVSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVS 666
Query: 236 QVAIHPSGSYILTASKDGKMKILDL------LEGHPIFTLSGHNGPVNAVNFSPTGDTFS 289
V S S ++++S D +K+ DL + P+ + GH N V S + +
Sbjct: 667 YVRFVDS-STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIA 725
Query: 290 SAGDDKLVFIWKTNF 304
+ + VF++ F
Sbjct: 726 TGSETNEVFVYHKAF 740
Score = 58.4 bits (135), Expect = 2e-08
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 35 QIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSG-KYMASASRDKTVRIWVPT 93
Q+A+S+ + V +WD+ + H++ V + +SS+ +AS S D +V++W
Sbjct: 548 QVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN 607
Query: 94 VTGSTGMFKAHSQTVRSVQFSSD-GSKIITASDDKVVKLWSTHKHKF-ISSFVGHTNWVR 151
S G K + + VQF S+ G + S D V + K + + +GH V
Sbjct: 608 QGVSIGTIKTKA-NICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVS 666
Query: 152 CARMSNDGSIIASCSDDKSTKLWNL 176
R D S + S S D + KLW+L
Sbjct: 667 YVRFV-DSSTLVSSSTDNTLKLWDL 690
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 59.7 bits (138), Expect = 9e-09
Identities = 38/167 (22%), Positives = 83/167 (49%), Gaps = 8/167 (4%)
Query: 16 QLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS- 74
+L GHK+ + L ++ +++++A+ DN + +W+ T ++ H AV + +S
Sbjct: 330 KLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHV 389
Query: 75 GKYMAS--ASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITA---SDDKVV 129
+AS + D+ +R W T SQ V ++ +S + +++++ S ++++
Sbjct: 390 HGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQ-VCNLAWSKNVNELVSTHGYSQNQII 448
Query: 130 KLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNL 176
+W I++ GHT V +S DG I + + D++ + WN+
Sbjct: 449 -VWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 51.2 bits (117), Expect = 3e-06
Identities = 48/245 (19%), Positives = 105/245 (42%), Gaps = 11/245 (4%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYM 78
G ++++ ++ + +A + V +WD R+ +GH V + + SS +
Sbjct: 250 GAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWGSS--VL 307
Query: 79 ASASRDKTV-RIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKH 137
+S SRDK++ + + H V +++S D ++ + +D + +W+ H
Sbjct: 308 SSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHST 367
Query: 138 KFISSFVGHTNWVRCARMS-NDGSIIAS--CSDDKSTKLWNLDSGECIHTYKDLKGHGLH 194
+ + + HT V+ S + ++AS + D+ + WN + + + D +
Sbjct: 368 QPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSI-DTCSQVCN 426
Query: 195 LAWHPSGCYVAVAT---SHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASK 251
LAW V+T S + ++ T + + + H V +A+ P G I+T +
Sbjct: 427 LAW-SKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAG 485
Query: 252 DGKMK 256
D ++
Sbjct: 486 DETLR 490
Score = 49.6 bits (113), Expect = 1e-05
Identities = 68/291 (23%), Positives = 119/291 (40%), Gaps = 15/291 (5%)
Query: 34 QQIATSSLDNSVLLWDLRGTMRSYRFQ-GHDEAVMDVTFSSSGKYMASASRDKTVRIWVP 92
Q + L N V LW+ + + G +++V V ++ G ++A + V+IW
Sbjct: 222 QNVLAVGLGNCVYLWNACSSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWDA 281
Query: 93 TVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTH-KHKFISSFVGHTNWVR 151
+ T + H V ++ + S S + + S DK + + +S GH + V
Sbjct: 282 SRCKRTRTMEGHRLRVGALAWGS--SVLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVC 339
Query: 152 CARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHG 211
+ S D +AS +D +WN S + + Y + +AW P + S G
Sbjct: 340 GLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPH--VHGLLASGG 397
Query: 212 NVKLYDIRTHNLVQYYSIHN-EAVTQVA-IHPSGSYILTASKDGKMKILDLLEGHP---- 265
IR N + + + +QV + S + S G + ++ +P
Sbjct: 398 GTADRCIRFWNTTTNTHLSSIDTCSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSK 457
Query: 266 IFTLSGHNGPVNAVNFSPTGDTF-SSAGDDKLVFIWKTNFTDLSSESKENE 315
I TL+GH V + SP G T + AGD+ L F W F S++ ++E
Sbjct: 458 IATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRF-WNV-FPSPKSQNTDSE 506
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 59.3 bits (137), Expect = 1e-08
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 62 HDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKII 121
H +AV + S ++ S S DKT++IW + KAH V ++ S++G+ +
Sbjct: 194 HADAVTALAVSDG--FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGT-VY 250
Query: 122 TASDDKVVKLWS----THKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNL- 176
T S D+ +++W+ +H +++ H + V +++DGS++ S S D+S +W
Sbjct: 251 TGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWERE 310
Query: 177 DSGECIHTYKDLKGH 191
D+ + L+GH
Sbjct: 311 DTSNYMAVRGALRGH 325
Score = 53.2 bits (122), Expect = 8e-07
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA 79
H +A+TAL + D I + S D ++ +W + HD+AV + S++G +
Sbjct: 194 HADAVTALAVS--DGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGT-VY 250
Query: 80 SASRDKTVRIWVPTVTGS-----TGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW-- 132
+ S D+ +R+W TG + H V ++ + DGS + + S D+ + +W
Sbjct: 251 TGSADRRIRVWAKP-TGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWER 309
Query: 133 -STHKHKFI-SSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
T + + + GH + + N ++ S S D++ ++W + L G
Sbjct: 310 EDTSNYMAVRGALRGHDKAI--LSLFNVSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSG 367
Query: 191 H 191
H
Sbjct: 368 H 368
Score = 53.2 bits (122), Expect = 8e-07
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 16/147 (10%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSY----RFQGHDEAVMDVTFS 72
L+ HK+A+ AL N + + + S D S+L+W+ T +GHD+A++ + F+
Sbjct: 276 LEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FN 334
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTG---MFKAHSQTVRSV-----QFSSDGSKIITAS 124
S + S S D+TVRIW S + H++ V+S+ + D II+ S
Sbjct: 335 VS-DLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGS 393
Query: 125 DDKVVKLWSTHKHKFISSFVGHTNWVR 151
D VK W K +SF +TN V+
Sbjct: 394 LDGEVKCWKVSVTKPDNSF--YTNLVQ 418
Score = 36.7 bits (81), Expect = 0.074
Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 105 SQTVRSVQFSSDGSKIITASDDKVVKLWS-THKHKFISSFVGHTNWVRCARMSNDGSIIA 163
S TV+SV FS G KI TA D + +W T K + T R R + + +
Sbjct: 125 SGTVKSVGFS--GEKIFTAHQDGKIGVWKLTAKSGYKQLTTLPTLNDRLRRFALPKNYVQ 182
Query: 164 SCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNL 223
K +LW ++ + + G ++W + +K++
Sbjct: 183 VRRHKK--RLW-IEHADAVTALAVSDGFIYSVSWDKT------------LKIWRASDLRC 227
Query: 224 VQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHP----IFTLSGHNGPVNAV 279
+ H++AV +A+ +G+ + T S D ++++ G + TL H VNA+
Sbjct: 228 KESIKAHDDAVNAIAVSTNGT-VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNAL 286
Query: 280 NFSPTGDTFSSAGDDKLVFIWKTNFT 305
+ G S D+ + +W+ T
Sbjct: 287 ALNDDGSVLFSGSCDRSILVWEREDT 312
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 58.8 bits (136), Expect = 2e-08
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 162 IASCSDDKSTKLWNLDS---GECIHTYKDLKGHGLHLA---WHPSGCYV-AVATSHGNVK 214
+ S S D+ LW++ + + ++ +GH +A WH + A G +
Sbjct: 184 LLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLV 243
Query: 215 LYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYIL-TASKDGKMKILDLLE-GHPIFTLSGH 272
++D RT+ + +H V ++ +P ++L TAS D + + DL + P+ +S H
Sbjct: 244 IWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSH 303
Query: 273 NGPVNAVNFSPTGDT-FSSAGDDKLVFIWKTN 303
G V V + P +T +S+G+D+ + +W N
Sbjct: 304 EGEVFQVEWDPNHETVLASSGEDRRLMVWDLN 335
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 13 LKKQLKGHKNAITALYYNP-NDQQIATSSLDNSVLLWDLRG-TMRSYRFQGHDEAVMDVT 70
++ Q+K H+ + L +NP N+ +AT+S D++V L+DLR + H+ V V
Sbjct: 252 MQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVE 311
Query: 71 FSSSGK-YMASASRDKTVRIW 90
+ + + +AS+ D+ + +W
Sbjct: 312 WDPNHETVLASSGEDRRLMVW 332
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 245 YILTASKDGKMKILDLLEG------HPIFTLSGHNGPVNAVNFSPTGDT-FSSAGDDKLV 297
Y+L+ S+D K+ + D+ + +F GH + V++ + F SAG+D +
Sbjct: 183 YLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRL 242
Query: 298 FIWKTNFTDLSSESKENE 315
IW T + + K +E
Sbjct: 243 VIWDTRTNQMQHQVKVHE 260
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 58.8 bits (136), Expect = 2e-08
Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 9/212 (4%)
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQF--SSDGS-KIITASDDKVVKLWST 134
+ S++ +I P V T + A + SV + GS +++TA++D V+L+
Sbjct: 206 LREGSKESLSKINEPEVAFCTKLTSADNDITNSVDIYNAPSGSLRVMTANNDCTVRLFDA 265
Query: 135 HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH 194
++ F H + V S DG ++A D L + SG+ IH + +
Sbjct: 266 TNFALLNRFAFHWS-VNNISTSPDGKLVAVLGDSPECLLADTGSGKVIHGLEGHLDYSFS 324
Query: 195 LAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSI---HNEAVTQVAIHPSGSYILTASK 251
AWHP+G +A +L+D+R NL Q + + A+ + G ++ A
Sbjct: 325 SAWHPNGQILATGNQDTTCRLWDVR--NLSQSLKVLKGNMGAIRALRFTSDGRFLAMAEP 382
Query: 252 DGKMKILDLLEGHPIFTLSGHNGPVNAVNFSP 283
+ + D G+ G + ++FSP
Sbjct: 383 ADFVHLFDTEAGYSQCQEIDLFGEIAGISFSP 414
Score = 43.6 bits (98), Expect = 6e-04
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTFSSSG 75
L+GH + + ++PN Q +AT + D + LWD+R +S + +G+ A+ + F+S G
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDG 374
Query: 76 KYMASA 81
+++A A
Sbjct: 375 RFLAMA 380
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 30 NPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRI 89
+P+ + +A LL D + +GH + + +G+ +A+ ++D T R+
Sbjct: 286 SPDGKLVAVLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRL 345
Query: 90 W-VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
W V ++ S + K + +R+++F+SDG + A V L+ T
Sbjct: 346 WDVRNLSQSLKVLKGNMGAIRALRFTSDGRFLAMAEPADFVHLFDT 391
Score = 34.3 bits (75), Expect = 0.39
Identities = 29/133 (21%), Positives = 50/133 (37%), Gaps = 4/133 (3%)
Query: 199 PSGCY-VAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
PSG V A + V+L+D L+ ++ H +V ++ P G + + +
Sbjct: 245 PSGSLRVMTANNDCTVRLFDATNFALLNRFAFH-WSVNNISTSPDGKLVAVLGDSPECLL 303
Query: 258 LDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEGQ 317
D G I L GH + + P G ++ D +W + +LS K +G
Sbjct: 304 ADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLW--DVRNLSQSLKVLKGN 361
Query: 318 NMITGQRHLTEEG 330
T +G
Sbjct: 362 MGAIRALRFTSDG 374
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 58.8 bits (136), Expect = 2e-08
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 24/225 (10%)
Query: 59 FQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKA-------------HS 105
F HD +++ + FS GKY+ASA D VR+W T T ++ S
Sbjct: 214 FSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRS 273
Query: 106 QT----VRSVQFSSDGSKIITASDDKVVKLWSTH---KHKFISSFVGHTNWVRCARMSND 158
Q + + + S + +SD V L T K + F GH + S
Sbjct: 274 QIEPLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDLSWSEK 333
Query: 159 GSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHP-SGCYVAVATSHGNVKLYD 217
G +++S S D++ +LW + EC+ T+ +A++P Y + G V+++D
Sbjct: 334 GYLLSS-SVDETVRLWRVGCDECLRTFTH-NNFVTCVAFNPVDDNYFISGSIDGKVRIWD 391
Query: 218 IRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLE 262
+ +V Y I + VT V P + S G + + E
Sbjct: 392 VTRCRVVDYTDI-RDIVTAVCYRPDAKGAVIGSMTGNCRFYHIFE 435
Score = 53.6 bits (123), Expect = 6e-07
Identities = 66/336 (19%), Positives = 139/336 (41%), Gaps = 39/336 (11%)
Query: 12 CLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMR--SYRFQGHDEAV--- 66
C+ ++ H +I A+ ++P+ + IA++ D V +W + R +Y D V
Sbjct: 209 CIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFG 268
Query: 67 ---------MDVTFSSSGKYMA--SASRDKTVRIWVPTVTGSTGM----FKAHSQTVRSV 111
+ + + K + S D T + PT+ + FK H + +
Sbjct: 269 MNQRSQIEPLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDL 328
Query: 112 QFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSN-DGSIIASCSDDKS 170
+S G ++++S D+ V+LW + + +F H N+V C + D + S S D
Sbjct: 329 SWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGK 386
Query: 171 TKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLV--QYYS 228
++W++ + Y D++ + + P + + GN + Y I + L Q +
Sbjct: 387 VRIWDVTRCRVV-DYTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFYHIFENQLQMDQEIN 445
Query: 229 IH------NEAVTQVAIHPSGS---YILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV 279
+H ++ ++ + PS S ++ S D +++I + I L + +
Sbjct: 446 VHGKKKVASKRISGLQYLPSDSDSDKVMVTSADSQIRI--ICGEDVICKLKASSLRTTSA 503
Query: 280 NFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENE 315
+F G S +D + +W +++ L S+ +E
Sbjct: 504 SFISDGKHIISTSEDSYINVW--SYSQLPSKKPYSE 537
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 58.8 bits (136), Expect = 2e-08
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 24/225 (10%)
Query: 59 FQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKA-------------HS 105
F HD +++ + FS GKY+ASA D VR+W T T ++ S
Sbjct: 214 FSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRS 273
Query: 106 QT----VRSVQFSSDGSKIITASDDKVVKLWSTH---KHKFISSFVGHTNWVRCARMSND 158
Q + + + S + +SD V L T K + F GH + S
Sbjct: 274 QIEPLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDLSWSEK 333
Query: 159 GSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHP-SGCYVAVATSHGNVKLYD 217
G +++S S D++ +LW + EC+ T+ +A++P Y + G V+++D
Sbjct: 334 GYLLSS-SVDETVRLWRVGCDECLRTFTH-NNFVTCVAFNPVDDNYFISGSIDGKVRIWD 391
Query: 218 IRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLE 262
+ +V Y I + VT V P + S G + + E
Sbjct: 392 VTRCRVVDYTDI-RDIVTAVCYRPDAKGAVIGSMTGNCRFYHIFE 435
Score = 53.6 bits (123), Expect = 6e-07
Identities = 66/336 (19%), Positives = 139/336 (41%), Gaps = 39/336 (11%)
Query: 12 CLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMR--SYRFQGHDEAV--- 66
C+ ++ H +I A+ ++P+ + IA++ D V +W + R +Y D V
Sbjct: 209 CIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFG 268
Query: 67 ---------MDVTFSSSGKYMA--SASRDKTVRIWVPTVTGSTGM----FKAHSQTVRSV 111
+ + + K + S D T + PT+ + FK H + +
Sbjct: 269 MNQRSQIEPLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDL 328
Query: 112 QFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSN-DGSIIASCSDDKS 170
+S G ++++S D+ V+LW + + +F H N+V C + D + S S D
Sbjct: 329 SWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGK 386
Query: 171 TKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLV--QYYS 228
++W++ + Y D++ + + P + + GN + Y I + L Q +
Sbjct: 387 VRIWDVTRCRVV-DYTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFYHIFENQLQMDQEIN 445
Query: 229 IH------NEAVTQVAIHPSGS---YILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV 279
+H ++ ++ + PS S ++ S D +++I + I L + +
Sbjct: 446 VHGKKKVASKRISGLQYLPSDSDSDKVMVTSADSQIRI--ICGEDVICKLKASSLRTTSA 503
Query: 280 NFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENE 315
+F G S +D + +W +++ L S+ +E
Sbjct: 504 SFISDGKHIISTSEDSYINVW--SYSQLPSKKPYSE 537
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 57.2 bits (132), Expect = 5e-08
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 162 IASCSDDKSTKLWNLDSGEC------IHTYKDLKGHGLHLAWHPSGCYV-AVATSHGNVK 214
+ S S D+ LW++ + +H Y+ + +AWH + A +
Sbjct: 185 LLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLV 244
Query: 215 LYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYIL-TASKDGKMKILDLLE-GHPIFTLSGH 272
++D+RT+ + +H + ++ +P ++L TAS D + + DL + P+ LS H
Sbjct: 245 IWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKH 304
Query: 273 NGPVNAVNFSPTGDT-FSSAGDDKLVFIWKTN 303
G V V + P +T +S+G+D+ + +W N
Sbjct: 305 EGEVFQVEWDPNHETVLASSGEDRRLMVWDIN 336
Score = 44.0 bits (99), Expect = 5e-04
Identities = 25/123 (20%), Positives = 67/123 (54%), Gaps = 4/123 (3%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDN-SVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
+GH++ I + ++ ++ I S+ D+ +++WDLR ++ + H+ + ++F+ +
Sbjct: 215 EGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNE 274
Query: 77 Y-MASASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS-DDKVVKLWS 133
+ +A+AS D TV ++ + +T + H V V++ + ++ +S +D+ + +W
Sbjct: 275 WVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 334
Query: 134 THK 136
++
Sbjct: 335 INR 337
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 13 LKKQLKGHKNAITALYYNP-NDQQIATSSLDNSVLLWDLRG-TMRSYRFQGHDEAVMDVT 70
++ Q+K H+ I L +NP N+ +AT+S D++V L+DLR T + H+ V V
Sbjct: 253 MQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVE 312
Query: 71 FSSSGK-YMASASRDKTVRIW 90
+ + + +AS+ D+ + +W
Sbjct: 313 WDPNHETVLASSGEDRRLMVW 333
Score = 40.7 bits (91), Expect = 0.005
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 120 IITASDDKVVKLW---STHKHKFISS---FVGHTNWVRCA--RMSNDGSIIASCSDDKST 171
+++ S D+ + LW +T K ++ + GH + + M N+ +I S DD
Sbjct: 185 LLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNE-NIFGSAGDDCQL 243
Query: 172 KLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYV-AVATSHGNVKLYDIRTHNL-VQYYSI 229
+W+L + + H K + +L+++P +V A A+S V L+D+R + S
Sbjct: 244 VIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSK 303
Query: 230 HNEAVTQVAIHPSGSYILTAS-KDGKMKILDL 260
H V QV P+ +L +S +D ++ + D+
Sbjct: 304 HEGEVFQVEWDPNHETVLASSGEDRRLMVWDI 335
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 57.2 bits (132), Expect = 5e-08
Identities = 67/268 (25%), Positives = 114/268 (42%), Gaps = 26/268 (9%)
Query: 48 WDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGM---FKAH 104
++ RG +R+ + + F Y A+A K ++I+ + + + A
Sbjct: 689 FETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYPAI 748
Query: 105 SQTVRS----VQFSSDGSKIITASD-DKVVKLWSTHKHKFISSFVGHTNWVRCARMSND- 158
RS V +++ + +SD D +VKLW + IS F+ H S
Sbjct: 749 EMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEAC 808
Query: 159 GSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCY-VAVATSHGNVKLYD 217
+ +AS SDD S KLWN++ C+ T +++ + + + P + +A +S YD
Sbjct: 809 PTKLASGSDDCSVKLWNINERNCLGTIRNI-ANVCCVQFSPQSSHLLAFGSSDFRTYCYD 867
Query: 218 IRTHNLVQYYSI---HNEAVTQVAIHPSGSYILTASKDGKMKILDLLE--------GHPI 266
+R NL + I HN+AV+ A ++TAS D +K+ DL +
Sbjct: 868 LR--NLRTPWCILSGHNKAVS-YAKFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNACS 924
Query: 267 FTLSGHNGPVNAVNFSPTGDTFSSAGDD 294
T GH N V S T D + + G +
Sbjct: 925 LTFGGHTNEKNFVGLS-TSDGYIACGSE 951
Score = 46.4 bits (105), Expect = 9e-05
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 21/219 (9%)
Query: 16 QLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSG 75
+L N I +L ++ ++ AT+ + + +++ + M SG
Sbjct: 699 ELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSG 758
Query: 76 --------KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFS-SDGSKIITASDD 126
Y+AS+ D V++W T + F H + SV FS + +K+ + SDD
Sbjct: 759 VCWNNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDD 818
Query: 127 KVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGS-IIASCSDDKST---KLWNLDSGECI 182
VKLW+ ++ + + N V C + S S ++A S D T L NL + CI
Sbjct: 819 CSVKLWNINERNCLGTIRNIAN-VCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCI 877
Query: 183 HTYKDLKGHGLHLAWHP--SGCYVAVATSHGNVKLYDIR 219
L GH +++ + A++ +KL+D++
Sbjct: 878 -----LSGHNKAVSYAKFLDNETLVTASTDNTLKLWDLK 911
Score = 35.9 bits (79), Expect = 0.13
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMR--------SYRFQGHDEAVMD 68
L GH A++ + N+ + T+S DN++ LWDL+ T S F GH
Sbjct: 878 LSGHNKAVSYAKFLDNET-LVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNF 936
Query: 69 VTFSSSGKYMASASRDKTV 87
V S+S Y+A S V
Sbjct: 937 VGLSTSDGYIACGSETNEV 955
Score = 34.7 bits (76), Expect = 0.30
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 35 QIATSSLDNSVLLWDL--RGTMRSYRFQGHDEAVMDVTFS-SSGKYMASASRD-KTVRIW 90
++A+ S D SV LW++ R + + R + V V FS S +A S D +T
Sbjct: 811 KLASGSDDCSVKLWNINERNCLGTIRNIAN---VCCVQFSPQSSHLLAFGSSDFRTYCYD 867
Query: 91 VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK--HKFIS------S 142
+ + + H++ V +F D ++TAS D +KLW K H +S +
Sbjct: 868 LRNLRTPWCILSGHNKAVSYAKFL-DNETLVTASTDNTLKLWDLKKTTHGGLSTNACSLT 926
Query: 143 FVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYK 186
F GHTN +S IA S+ ++ I +YK
Sbjct: 927 FGGHTNEKNFVGLSTSDGYIACGSETNEVYAYHRSLPMPITSYK 970
Score = 30.7 bits (66), Expect = 4.9
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 244 SYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDT-FSSAGDDKLVFIWKT 302
+Y+ ++ DG +K+ D+ G I H +V+FS T +S DD V +W
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNI 826
Query: 303 N 303
N
Sbjct: 827 N 827
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 57.2 bits (132), Expect = 5e-08
Identities = 60/196 (30%), Positives = 86/196 (43%), Gaps = 17/196 (8%)
Query: 140 ISSFVGHTNWVRCARMSNDGSIIASCS-DDKSTKLWNLD----SGECIHTYKDLKG--HG 192
++S H + C G S D+++ LW+LD S E + KD G H
Sbjct: 113 VASLDAHVGKINCVLWWPSGRCDKLISIDEQNIFLWSLDCSKKSAEVLS--KDSAGMLHS 170
Query: 193 LHL-AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYIL-TAS 250
L AW P AT +V+ +D+RT V SI + V V +P +IL TA
Sbjct: 171 LSGGAWDPHDVNAVAATGESSVQFWDLRTMKKVN--SIEHAHVRGVDYNPKREHILVTAE 228
Query: 251 KDGKMKILDLLEGH-PIFTLSGHNGPVNAVNFSPTGD-TFSSAGDDKLVFIWKTNFTDLS 308
+ + + DL + P+ L GH AV +P D SAG D +V +W + T S
Sbjct: 229 DESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLWYASAT--S 286
Query: 309 SESKENEGQNMITGQR 324
S+ K +E T QR
Sbjct: 287 SDDKTSESPVESTRQR 302
Score = 34.7 bits (76), Expect = 0.30
Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
L K G ++++ ++P+D ++ ++SV WDLR TM+ H V V ++
Sbjct: 160 LSKDSAGMLHSLSGGAWDPHDVNAVAATGESSVQFWDLR-TMKKVNSIEHAH-VRGVDYN 217
Query: 73 SSGKYMASASRDKT-VRIW-VPTVTGSTGMFKAHSQTVRSVQFSSD-GSKIITASDDKVV 129
+++ + D++ + +W + H+ +V+ + + I++A D VV
Sbjct: 218 PKREHILVTAEDESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVV 277
Query: 130 KLW 132
LW
Sbjct: 278 NLW 280
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 56.8 bits (131), Expect = 6e-08
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 13/142 (9%)
Query: 62 HDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMF-KAHSQTVRSVQFSSDGSKI 120
H +AV + S G + S S D+T++IW T F AH + +V S +G I
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD-I 222
Query: 121 ITASDDKVVKLW----------STHKHKFISSFVGHTNWVRCARMS-NDGSIIASCSDDK 169
T S D+ +K+W KH ++ H + + +S +GS++ S D
Sbjct: 223 YTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDG 282
Query: 170 STKLWNLDSGECIHTYKDLKGH 191
S +W D G I L+GH
Sbjct: 283 SILVWERDDGGDIVVVGMLRGH 304
Score = 54.4 bits (125), Expect = 3e-07
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 13/185 (7%)
Query: 136 KHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHL 195
+HK +S+V H + V +S DG+++ S S D++ K+W +C+ ++ + ++
Sbjct: 155 RHKK-ASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINA 213
Query: 196 AWHPSGCYVAVATSHGNVKLY----------DIRTHNLVQYYSIHNEAVTQVAIH-PSGS 244
+ +S +K++ R H+LV S HN + +A+ +GS
Sbjct: 214 VALSENGDIYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGS 273
Query: 245 YILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV-NFSPTGDTFSSAGDDKLVFIWKTN 303
+ + DG + + + +G I + G +V + D S DK V +WK +
Sbjct: 274 LLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDILCSGSADKTVRLWKCS 333
Query: 304 FTDLS 308
D S
Sbjct: 334 AKDYS 338
Score = 44.4 bits (100), Expect = 4e-04
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 104 HSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFV-GHTNWVRCARMSNDGSII 162
H V + S DG+ + + S D+ +K+W T K + SF H + + +S +G I
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIY 223
Query: 163 ASCSDDKSTKLWNLDSGECIHTYKDLKGHGL--HLAWHPSGC-YVAVATSHGNV 213
SD + K+W + E K + H L L+ H SG +A++ ++G++
Sbjct: 224 TGSSDQR-IKVWRKNINE--ENVKKKRKHSLVAILSEHNSGINALALSGTNGSL 274
Score = 41.5 bits (93), Expect = 0.003
Identities = 56/251 (22%), Positives = 101/251 (40%), Gaps = 32/251 (12%)
Query: 74 SGKYMASASRDKTVRIW----VPTV--TGSTGMF----KAHSQTVRSVQFSSDGSKIITA 123
+GK + + S D VR+W + T+ S G + V+S+ +D K+ TA
Sbjct: 47 AGKRLYTGSNDGVVRLWNANTLETLAEASSNGDVITGERGGGGAVKSLVILAD--KLFTA 104
Query: 124 SDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKS-TKLWNLDSGECI 182
D +++W + + VG ++ A M A C K+ ++ +
Sbjct: 105 HQDHKIRVWKI--NDVVEEDVGGKKYMHLATMPTISDRFAKCLMPKNQVEIRRHKKASWV 162
Query: 183 HTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHN-LVQYYSIHNEAVTQVAIHP 241
H + G LA G + + +K++ L + + H++A+ VA+
Sbjct: 163 HHVDAVSG----LALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSE 218
Query: 242 SGSYILTASKDGKMKI---------LDLLEGHPIFT-LSGHNGPVNAVNFSPT-GDTFSS 290
+G I T S D ++K+ + H + LS HN +NA+ S T G S
Sbjct: 219 NGD-IYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHS 277
Query: 291 AGDDKLVFIWK 301
G D + +W+
Sbjct: 278 GGSDGSILVWE 288
Score = 33.5 bits (73), Expect = 0.69
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 17 LKGHKNAITALYYN-PNDQQIATSSLDNSVLLW---DLRGTMRSYRFQGHDEAVMDVTFS 72
L H + I AL + N + + D S+L+W D + +GH E+V+ +
Sbjct: 255 LSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAVV 314
Query: 73 SSGKYMASASRDKTVRIW 90
S + S S DKTVR+W
Sbjct: 315 SD--ILCSGSADKTVRLW 330
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 56.8 bits (131), Expect = 6e-08
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRS---YRFQGHDEAVMDVTFSSSG 75
GH++ + +L +N + + T +D ++ D+R +RS ++GH + V + +S SG
Sbjct: 223 GHQSRVGSLAWN--NHILTTGGMDGLIINNDVR--IRSPIVETYRGHTQEVCGLKWSGSG 278
Query: 76 KYMASASRDKTVRIWVPTVTGSTG------MFKAHSQTVRSVQFSSDGSKIIT---ASDD 126
+ +AS D V IW +V S + H+ V+++ + + ++ D
Sbjct: 279 QQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGD 338
Query: 127 KVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCS-DDKSTKLWNLDSGECIHTY 185
+ +K W+TH ++S + N+ +++S LW S +
Sbjct: 339 RTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPS---MVKM 395
Query: 186 KDLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDI 218
+L GH L++A P GC VA A ++ +++
Sbjct: 396 AELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 52.8 bits (121), Expect = 1e-06
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDL------RGTMRSYRFQGHDEAVMDVT- 70
+GH + L ++ + QQ+A+ DN V +WD T +R + H AV +
Sbjct: 263 RGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 322
Query: 71 --FSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS--DD 126
F ++ D+T++ W T TG+ V S+ +S + +++++
Sbjct: 323 CPFQANLLATGGGGGDRTIKFW-NTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQ 381
Query: 127 KVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNL 176
+ LW ++ GHT+ V S DG +AS + D++ + WN+
Sbjct: 382 NQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 51.2 bits (117), Expect = 3e-06
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 168 DKSTKLWNLDSGEC--IHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQ 225
D + LW+ +G + T + KG + W P G +VAV ++ V+L+D ++ Q
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNR--Q 216
Query: 226 YYSIHNEAVTQVAIHPSGSYILTAS-KDGKMKILDLLEGHPIF-TLSGHNGPVNAVNFSP 283
++ ++V ++ILT DG + D+ PI T GH V + +S
Sbjct: 217 LRTLKGGHQSRVGSLAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSG 276
Query: 284 TGDTFSSAGDDKLVFIWKTNFTDLSSESK 312
+G +S G+D +V IW + +S ++
Sbjct: 277 SGQQLASGGNDNVVHIWDRSVASSNSTTQ 305
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 56.8 bits (131), Expect = 6e-08
Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRS---YRFQGHDEAVMDVTFSSSG 75
GH++ + +L +N + + T +D ++ D+R +RS ++GH + V + +S SG
Sbjct: 213 GHQSRVGSLAWN--NHILTTGGMDGLIINNDVR--IRSPIVETYRGHTQEVCGLKWSGSG 268
Query: 76 KYMASASRDKTVRIWVPTVTGSTG------MFKAHSQTVRSVQFSSDGSKIIT---ASDD 126
+ +AS D V IW +V S + H+ V+++ + + ++ D
Sbjct: 269 QQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGD 328
Query: 127 KVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCS-DDKSTKLWNLDSGECIHTY 185
+ +K W+TH ++S + N+ +++S LW S +
Sbjct: 329 RTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPS---MVKM 385
Query: 186 KDLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDI 218
+L GH L++A P GC VA A ++ +++
Sbjct: 386 AELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 52.8 bits (121), Expect = 1e-06
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDL------RGTMRSYRFQGHDEAVMDVT- 70
+GH + L ++ + QQ+A+ DN V +WD T +R + H AV +
Sbjct: 253 RGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 312
Query: 71 --FSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS--DD 126
F ++ D+T++ W T TG+ V S+ +S + +++++
Sbjct: 313 CPFQANLLATGGGGGDRTIKFW-NTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQ 371
Query: 127 KVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNL 176
+ LW ++ GHT+ V S DG +AS + D++ + WN+
Sbjct: 372 NQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 51.2 bits (117), Expect = 3e-06
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 168 DKSTKLWNLDSGEC--IHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQ 225
D + LW+ +G + T + KG + W P G +VAV ++ V+L+D ++ Q
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNR--Q 206
Query: 226 YYSIHNEAVTQVAIHPSGSYILTAS-KDGKMKILDLLEGHPIF-TLSGHNGPVNAVNFSP 283
++ ++V ++ILT DG + D+ PI T GH V + +S
Sbjct: 207 LRTLKGGHQSRVGSLAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSG 266
Query: 284 TGDTFSSAGDDKLVFIWKTNFTDLSSESK 312
+G +S G+D +V IW + +S ++
Sbjct: 267 SGQQLASGGNDNVVHIWDRSVASSNSTTQ 295
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 56.4 bits (130), Expect = 9e-08
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 25/227 (11%)
Query: 49 DLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVT------------- 95
+L +S Q H ++ + FS G+Y+ASA D ++IW +
Sbjct: 349 ELTALFKSQEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMDKQE 408
Query: 96 -GSTGMFKAHSQTVRSVQFS-------SDGSKIITASDDKVVKLWSTHKHKFISSFVGHT 147
GS +F + + V S S K ++ + V + K + SFVGH
Sbjct: 409 DGSINLFLLANGSPEPVSMSPKRRGRTSFSRKSVSLDNVLVPEAVFGLSEKPVCSFVGHL 468
Query: 148 NWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHP-SGCYVAV 206
+ V S +++S S DK+ +LW+L S C+ + + + ++P Y
Sbjct: 469 DDVLDLSWSKSQHLLSS-SMDKTVRLWDLSSKTCLKVFSH-SDYVTCIQFNPVDDNYFIS 526
Query: 207 ATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDG 253
+ V+++ I H +V + +H E VT P G L S G
Sbjct: 527 GSLDAKVRIWSIPDHQVVDWNDLH-EMVTAACYTPDGQGALVGSYKG 572
Score = 41.9 bits (94), Expect = 0.002
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSS-SGKY 77
GH + + L ++ + Q + +SS+D +V LWDL + + H + V + F+ Y
Sbjct: 466 GHLDDVLDLSWSKS-QHLLSSSMDKTVRLWDL-SSKTCLKVFSHSDYVTCIQFNPVDDNY 523
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKH 137
S S D VRIW H + V + ++ DG + S L++TH +
Sbjct: 524 FISGSLDAKVRIWSIPDHQVVDWNDLH-EMVTAACYTPDGQGALVGSYKGTCCLYNTHDN 582
Query: 138 K 138
K
Sbjct: 583 K 583
Score = 36.3 bits (80), Expect = 0.098
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 18/180 (10%)
Query: 12 CLKKQLKGHKNAITALYYNP-NDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT 70
CLK + H + +T + +NP +D + SLD V +W + + + E V
Sbjct: 501 CLK--VFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPDH-QVVDWNDLHEMVTAAC 557
Query: 71 FSSSGKYMASASRDKTVRIWVP---------TVTGSTGMFKAHSQTVRSVQFSSDGSK-- 119
++ G+ S T ++ + K H + + QF + S
Sbjct: 558 YTPDGQGALVGSYKGTCCLYNTHDNKLQQRREINLKNRKKKTHHKKITGFQFVAGSSSEV 617
Query: 120 IITASDDKVVKLWSTHK-HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDS 178
++T++D + + HKF F +TN A ++++G + S S+D + +WN DS
Sbjct: 618 LVTSADSRTRVVDGVDLVHKF-KGF-RNTNSQISASLTSNGKFLVSASEDSNVYVWNYDS 675
Score = 31.1 bits (67), Expect = 3.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 269 LSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
+ H G + ++ FS G +SAG+D ++ IWK
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWK 391
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 56.4 bits (130), Expect = 9e-08
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 46/284 (16%)
Query: 62 HDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSV-QFSSDGSKI 120
H A+ D+++ + +AS D+T+++W TG+ H+ TV+S+ ++ +
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 121 ITASDDKVVKLW------STHKHKFISSFVGHTNWVRCARMSN----------------- 157
++ S D LW S+HK +F + G + +S
Sbjct: 187 VSGSRDGCFALWDLRCKSSSHKEEFCINSTGMVKGAHLSPLSKRIRRRKAASSSITSVLY 246
Query: 158 --DGSIIASC-SDDKSTKLWNLDSGECIHTY----------KDLKGHGL-HLAWHPSGCY 203
D IA+ + D + K W++ + K+ + HG+ L+ SG Y
Sbjct: 247 VKDEITIATAGAPDSALKFWDIRKLKAPFAQASPQSDPTNTKEKRSHGIVSLSQDSSGTY 306
Query: 204 VAVATSHGNVKLYD-IRTHN-LVQYYS--IHNEAVTQVAIHPSGSYILTASKDGKMKI-- 257
+ + + LY+ +R VQ +S + + I P G Y+L+ S DG I
Sbjct: 307 LTASCKDNRIYLYNTLRLDKGPVQSFSGCRIDSFFVRTMISPDGEYVLSGSSDGNAYIWQ 366
Query: 258 LDLLEGHPIFTLSGHNGPVNAVNFSPTG-DTFSSAGDDKLVFIW 300
++ + PI L GH+ V AV++SP+ ++A DD V +W
Sbjct: 367 VNKPQVDPII-LKGHDFEVTAVDWSPSEIGKVATASDDFTVRLW 409
Score = 46.4 bits (105), Expect = 9e-05
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 10 EPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDL----RGTMRSYRFQGHDEA 65
+P K+ + H I +L + + + S DN + L++ +G ++S+ D
Sbjct: 283 DPTNTKEKRSH--GIVSLSQDSSGTYLTASCKDNRIYLYNTLRLDKGPVQSFSGCRIDSF 340
Query: 66 VMDVTFSSSGKYMASASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFS-SDGSKIITA 123
+ S G+Y+ S S D IW V + K H V +V +S S+ K+ TA
Sbjct: 341 FVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATA 400
Query: 124 SDDKVVKLWS 133
SDD V+LW+
Sbjct: 401 SDDFTVRLWN 410
Score = 44.8 bits (101), Expect = 3e-04
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVL-LWDLRGTMRSYRF-----------QGH 62
++ K ++IT++ Y ++ IAT+ +S L WD+R + +
Sbjct: 232 RRRKAASSSITSVLYVKDEITIATAGAPDSALKFWDIRKLKAPFAQASPQSDPTNTKEKR 291
Query: 63 DEAVMDVTFSSSGKYMASASRDK------TVRIWVPTVTGSTGMFKAHSQTVRSVQFSSD 116
++ ++ SSG Y+ ++ +D T+R+ V +G + S VR++ S D
Sbjct: 292 SHGIVSLSQDSSGTYLTASCKDNRIYLYNTLRLDKGPVQSFSGC-RIDSFFVRTM-ISPD 349
Query: 117 GSKIITASDDKVVKLWSTHKHKFISSFV-GHTNWVRCARMS-NDGSIIASCSDDKSTKLW 174
G +++ S D +W +K + + GH V S ++ +A+ SDD + +LW
Sbjct: 350 GEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVRLW 409
Query: 175 NLDSGEC 181
N+++ C
Sbjct: 410 NIENNIC 416
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 103 AHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVR--CARMSNDGS 160
AH + + + S ++TAS D+ +K+W ++K +GHT V+ C+ +N
Sbjct: 126 AHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTN-SD 184
Query: 161 IIASCSDDKSTKLWNL 176
++ S S D LW+L
Sbjct: 185 LLVSGSRDGCFALWDL 200
Score = 31.1 bits (67), Expect = 3.7
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 133 STHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHG 192
+T K +F ++ H N + S + + S D++ K+W+++ +C G
Sbjct: 115 NTEKARF-RDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTV 173
Query: 193 LHLAWHPSGCYVAVATSH-GNVKLYDIR 219
+ HP+ + V+ S G L+D+R
Sbjct: 174 KSMCSHPTNSDLLVSGSRDGCFALWDLR 201
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 56.0 bits (129), Expect = 1e-07
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 27/222 (12%)
Query: 59 FQGHDEAVMDVTFSSSGKYMASASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFS-SD 116
F HD +++ + FS GKY+ASA D VR+W + F+ V F +D
Sbjct: 253 FSAHDGSIVVMKFSHDGKYLASAGEDCVVRVWNIIEDERRDNEFEVAESDSSCVYFGMND 312
Query: 117 GSKI--ITASDDKVVKLWSTHKHKFISS------------------FVGHTNWVRCARMS 156
S+I + ++K+ K + K S+ F GHT + S
Sbjct: 313 KSQIEPLKTENEKIEKSRGLLRKKSESTCAVLPSKVFSISETPQHEFRGHTGEILDLSWS 372
Query: 157 NDGSIIASCSDDKSTKLWNL-DSGECIHTYKDLKGHGLHLAWHP-SGCYVAVATSHGNVK 214
G +++S S D++ +LW + S ECI + K +A++P Y + G V+
Sbjct: 373 EKGFLLSS-SVDETVRLWRVGSSDECIRVFSH-KSFVTCVAFNPVDDNYFISGSIDGKVR 430
Query: 215 LYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMK 256
++D+ +V Y I + VT + P G + S G+ +
Sbjct: 431 IWDVSQFRVVDYTDI-RQIVTALCYRPDGKGAVVGSMTGECR 471
Score = 46.4 bits (105), Expect = 9e-05
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 57 YRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSS- 115
+ F+GH ++D+++S G ++ S+S D+TVR+W + +H V V F+
Sbjct: 357 HEFRGHTGEILDLSWSEKG-FLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPV 415
Query: 116 DGSKIITASDDKVVKLWSTHKHKFIS-SFVGHTNWVRCARMSNDGSIIASCSDD 168
D + I+ S D V++W + + + + + C R G+++ S + +
Sbjct: 416 DDNYFISGSIDGKVRIWDVSQFRVVDYTDIRQIVTALCYRPDGKGAVVGSMTGE 469
Score = 35.5 bits (78), Expect = 0.17
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Query: 1 MMEDKVTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQ 60
++ KV + + + +GH I L ++ + +SS+D +V LW + + R
Sbjct: 343 VLPSKVFSISETPQHEFRGHTGEILDLSWSEKGF-LLSSSVDETVRLWRVGSSDECIRVF 401
Query: 61 GHDEAVMDVTFSS-SGKYMASASRDKTVRIW 90
H V V F+ Y S S D VRIW
Sbjct: 402 SHKSFVTCVAFNPVDDNYFISGSIDGKVRIW 432
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 270 SGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENE 315
S H+G + + FS G +SAG+D +V +W + E ++NE
Sbjct: 254 SAHDGSIVVMKFSHDGKYLASAGEDCVVRVWNI----IEDERRDNE 295
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 56.0 bits (129), Expect = 1e-07
Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 20/226 (8%)
Query: 49 DLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPT--------------- 93
+L ++ Q H+ ++ + FS GKY+ASA D + IW
Sbjct: 399 ELTALYKTQEIQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKGELLLDRPEL 458
Query: 94 -VTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRC 152
+ + G + + + R +S K ++ + V K SF GH + V
Sbjct: 459 LLLATNGSPEPTTMSPRRRGRTSISRKSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLD 518
Query: 153 ARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHP-SGCYVAVATSHG 211
S +++S S DK+ +LWNL S C+ + + + ++P Y +
Sbjct: 519 LAWSKSQHLLSS-SMDKTVRLWNLSSQTCLKVFSH-SDYVTCIQFNPVDDRYFISGSLDA 576
Query: 212 NVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
V+++ I +V +Y +H E VT P G +L S G ++
Sbjct: 577 KVRVWSIPDRQVVDWYDLH-EMVTSACYTPDGQGVLVGSYKGSCRM 621
Score = 50.8 bits (116), Expect = 4e-06
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 18/212 (8%)
Query: 59 FQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSS-DG 117
FQGH + V+D+ +S S +++ S+S DKTVR+W + +F +HS V +QF+ D
Sbjct: 509 FQGHVDDVLDLAWSKS-QHLLSSSMDKTVRLWNLSSQTCLKVF-SHSDYVTCIQFNPVDD 566
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
I+ S D V++WS + + + H V A + DG + S S ++++
Sbjct: 567 RYFISGSLDAKVRVWSIPDRQVVDWYDLH-EMVTSACYTPDGQGVLVGSYKGSCRMYSAS 625
Query: 178 SGECIH------TYKDLKGHGLHLAWHP----SGCYVAVATSHGNVKLYDIRTHNLVQYY 227
+ K K H + S V V +S +++ D +LV
Sbjct: 626 DNKLQQKSQINLQNKKKKAHQKKITGFQFVPGSSSEVLVTSSDSRIRVVD--GTDLVNKL 683
Query: 228 SIHNEAVTQV--AIHPSGSYILTASKDGKMKI 257
+Q+ +I G Y+++AS+D + I
Sbjct: 684 KGFRNTSSQISASITADGKYVVSASEDSHVYI 715
Score = 43.2 bits (97), Expect = 9e-04
Identities = 38/181 (20%), Positives = 77/181 (42%), Gaps = 16/181 (8%)
Query: 10 EPCLKKQLKGHKNAITALYYNP-NDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMD 68
+ CLK + H + +T + +NP +D+ + SLD V +W + + H E V
Sbjct: 544 QTCLK--VFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYDLH-EMVTS 600
Query: 69 VTFSSSGKYMASASRDKTVRIWVPT---------VTGSTGMFKAHSQTVRSVQF--SSDG 117
++ G+ + S + R++ + + KAH + + QF S
Sbjct: 601 ACYTPDGQGVLVGSYKGSCRMYSASDNKLQQKSQINLQNKKKKAHQKKITGFQFVPGSSS 660
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
++T+SD ++ + T + F ++ + A ++ DG + S S+D +W +
Sbjct: 661 EVLVTSSDSRIRVVDGTDLVNKLKGFRNTSSQIS-ASITADGKYVVSASEDSHVYIWKYE 719
Query: 178 S 178
S
Sbjct: 720 S 720
Score = 42.7 bits (96), Expect = 0.001
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSS-SGK 76
+GH + + L ++ + Q + +SS+D +V LW+L + + H + V + F+ +
Sbjct: 510 QGHVDDVLDLAWSKS-QHLLSSSMDKTVRLWNL-SSQTCLKVFSHSDYVTCIQFNPVDDR 567
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
Y S S D VR+W + H + V S ++ DG ++ S +++S
Sbjct: 568 YFISGSLDAKVRVWSIPDRQVVDWYDLH-EMVTSACYTPDGQGVLVGSYKGSCRMYSASD 626
Query: 137 HK 138
+K
Sbjct: 627 NK 628
Score = 33.5 bits (73), Expect = 0.69
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 269 LSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
+ HNG + ++ FS G +SAG+D ++ IW+
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQ 441
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 56.0 bits (129), Expect = 1e-07
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA 79
H +A++ L N + ++S D ++ +W + + HD+AV V S++ +
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVV-STTEAIVF 263
Query: 80 SASRDKTVRIWVPTVTGS----TGM--FKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
S S D TV+ W G T M V ++ S +G+ + S D +V W
Sbjct: 264 SGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWE 323
Query: 134 THKH-KFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHT-YKDLKGH 191
K + GH V C ++ GS++ S S DK+ +W D IHT L GH
Sbjct: 324 REKQLNYGGILKGHKLAVLCLEVA--GSLVFSGSADKTICVWKRDGN--IHTCLSVLTGH 379
Score = 44.8 bits (101), Expect = 3e-04
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 22/183 (12%)
Query: 12 CLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLW--DLRGTMRSYRFQG----HDEA 65
CL+ + H +A+ ++ + + + + S D +V W D +G + + A
Sbjct: 240 CLES-IPAHDDAVNSVV-STTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESA 297
Query: 66 VMDVTFSSSGKYMASASRDKTVRIWV-PTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS 124
V + S +G + S D V W G+ K H V ++ + GS + + S
Sbjct: 298 VTALAVSKNGAAVYFGSSDGLVNFWEREKQLNYGGILKGHKLAVLCLEVA--GSLVFSGS 355
Query: 125 DDKVVKLWST--HKHKFISSFVGHTNWVRCARMSNDGS---------IIASCSDDKSTKL 173
DK + +W + H +S GHT V+C + D I+ S S DKS K+
Sbjct: 356 ADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKV 415
Query: 174 WNL 176
W +
Sbjct: 416 WGV 418
Score = 43.2 bits (97), Expect = 9e-04
Identities = 36/173 (20%), Positives = 75/173 (43%), Gaps = 11/173 (6%)
Query: 136 KHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHL 195
KH+ + ++ H + V C ++++ ++ S S D++ K+W + +C+ + ++
Sbjct: 196 KHR-TALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESI-PAHDDAVNS 253
Query: 196 AWHPSGCYVAVATSHGNVKLY------DIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTA 249
+ V ++ G VK + H L+Q + AVT +A+ +G+ +
Sbjct: 254 VVSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFG 313
Query: 250 SKDGKMKILDL-LEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWK 301
S DG + + + + L GH V + + G S DK + +WK
Sbjct: 314 SSDGLVNFWEREKQLNYGGILKGHKLAVLCLEVA--GSLVFSGSADKTICVWK 364
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 56.0 bits (129), Expect = 1e-07
Identities = 68/262 (25%), Positives = 111/262 (42%), Gaps = 30/262 (11%)
Query: 64 EAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITA 123
+ + ++ FS++ ++ +S DK+VR++ G FK H V F D S
Sbjct: 17 DGISNLRFSNNSDHLLVSSWDKSVRLYDANGDLMRGEFK-HGGAVLDCCFHDDSSGFSVC 75
Query: 124 SDDKVVKL-WSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGEC- 181
+D KV ++ ++ K + + H VRC S + + S DK+ K W+
Sbjct: 76 ADTKVRRIDFNAGKEDVLGT---HEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGT 132
Query: 182 ----IHTY-KDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYY--SIHNEAV 234
I TY + + + L L G + VAT+ +V +YD+R + + S
Sbjct: 133 ERTQIGTYMQPERVNSLSLV----GNRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQT 188
Query: 235 TQVAIHPSGSYILTASKDGK--MKILDLLEGHPI--FTLSGHNG---------PVNAVNF 281
V +P+G+ +S +G+ M+ DL E + H PVNA+ F
Sbjct: 189 RCVRCYPNGTGYALSSVEGRVSMEFFDLSEAAQAKKYAFKCHRKSEDGRDIVYPVNAIAF 248
Query: 282 SPTGDTFSSAGDDKLVFIWKTN 303
P TF+S G D V IW N
Sbjct: 249 HPIYGTFASGGCDGFVNIWDGN 270
Score = 54.0 bits (124), Expect = 5e-07
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 11 PCLKKQLKGH-KNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDV 69
P + ++L + I+ L ++ N + SS D SV L+D G + F+ H AV+D
Sbjct: 5 PAIGRELSNPPSDGISNLRFSNNSDHLLVSSWDKSVRLYDANGDLMRGEFK-HGGAVLDC 63
Query: 70 TFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVV 129
F + + K RI G + H + VR V++S ++IT S DK +
Sbjct: 64 CFHDDSSGFSVCADTKVRRI--DFNAGKEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTI 121
Query: 130 KLW 132
K W
Sbjct: 122 KCW 124
Score = 32.7 bits (71), Expect = 1.2
Identities = 43/207 (20%), Positives = 80/207 (38%), Gaps = 19/207 (9%)
Query: 62 HDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGST--GMFKAHSQTVRSVQFSSDGSK 119
H++ V V +S + + + S DKT++ W P T + Q R S G++
Sbjct: 96 HEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTERTQIGTYMQPERVNSLSLVGNR 155
Query: 120 IITASDDKVVKLW-----STHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLW 174
++ A+ + V ++ S + + SS T VRC + G ++S S + +
Sbjct: 156 LVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRC-YPNGTGYALSSVEGRVSMEFF 214
Query: 175 NLDSGECIHTY------KDLKGHGL-----HLAWHPSGCYVAVATSHGNVKLYDIRTHNL 223
+L Y K G + +A+HP A G V ++D
Sbjct: 215 DLSEAAQAKKYAFKCHRKSEDGRDIVYPVNAIAFHPIYGTFASGGCDGFVNIWDGNNKKR 274
Query: 224 VQYYSIHNEAVTQVAIHPSGSYILTAS 250
+ YS + ++ ++ G + AS
Sbjct: 275 LYQYSKYPTSIAALSFSRDGGLLAVAS 301
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASAS 82
+ A+ ++P A+ D V +WD R Y++ + ++ ++FS G +A AS
Sbjct: 243 VNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDGGLLAVAS 301
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 56.0 bits (129), Expect = 1e-07
Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 23/258 (8%)
Query: 18 KGHKNAITAL--YYNPNDQQIATSSLDNSVLLW--DLRGTMRSYRFQGHDEAVMDVTFSS 73
+GH+ + ++ +Y N Q I +++LD + W D G+ Y G M +S+
Sbjct: 503 EGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTM--AYSA 560
Query: 74 SGKYMASASRDKTVRIWVPTVTGSTGMFKA-----HSQTVRSVQFSSDGSKIITASDDKV 128
G + S K ++ S G K H +++ VQF + ++ + A DD
Sbjct: 561 DGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFS 620
Query: 129 VKLWSTHKHKFISSFVGHTNWVRCARM--SNDGSIIASCSDDKSTKLW-NLDSGECIHTY 185
+K W + +++ G R+ + +GS++A ++ K+ N D +HT+
Sbjct: 621 IKFWDMDAVQLLTAIDGDGGLQASPRIRFNKEGSLLAVSGNENVIKIMANSDGLRLLHTF 680
Query: 186 KDLKGHGLHLAWHP-SGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGS 244
+++ A + + A ATS G+ R+ N+V ++ ++ V + P
Sbjct: 681 ENISSESSKPAINSIAAAAAAAATSAGHAD----RSANVVSIQGMNGDSRNMVDVKP--- 733
Query: 245 YILTASKDGKMKILDLLE 262
++T + K KI L E
Sbjct: 734 -VITEESNDKSKIWKLTE 750
Score = 50.8 bits (116), Expect = 4e-06
Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 17/239 (7%)
Query: 85 KTVRIWVPTVTG---STGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTH------ 135
KT ++W + + K +V V +S DGS A +V+L+S H
Sbjct: 394 KTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMR 453
Query: 136 KHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHL 195
+H I + VG N + + + +I +C DDK+ K+W+ +G HT++ + +
Sbjct: 454 QHLEIDAHVGGVNDISFSTPNKQLCVI-TCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Query: 196 AWH--PSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILT--ASK 251
H + ++ G +K + Y T +A G+ + + SK
Sbjct: 513 CPHYKENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSK 572
Query: 252 DGKMKILDL--LEGHPIFTLSG-HNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDL 307
DG+ I++ EG T G H + V F T + + +AGDD + W + L
Sbjct: 573 DGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQL 631
Score = 50.0 bits (114), Expect = 7e-06
Identities = 33/172 (19%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 16 QLKGHKNAITALYYN-PNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT--F 71
++ H + + ++ PN Q + T D ++ +WD ++ + F+GH+ V V +
Sbjct: 457 EIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHY 516
Query: 72 SSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKII---TASD-DK 127
+ +++ S + D ++ W+ GS + A + ++ +S+DG+++ T+ D +
Sbjct: 517 KENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 576
Query: 128 VVKLWSTHKHKFISSFVG-HTNWVRCARMSNDGSIIASCSDDKSTKLWNLDS 178
+ W+ + ++ G H + + + + DD S K W++D+
Sbjct: 577 FIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDA 628
Score = 37.5 bits (83), Expect = 0.042
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 206 VATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGK-MKILDLLEGH 264
++ S G + L+++ T + + A T +A HP + I+ D ++I ++
Sbjct: 851 MSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE 910
Query: 265 PIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
L GH+ + + FS + S+G D + +W T+
Sbjct: 911 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTD 949
Score = 35.1 bits (77), Expect = 0.23
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 2/119 (1%)
Query: 63 DEAVMDVTFSSSGKYMASASRDKTVRIWVPTV-TGSTGMFKAHSQTVRSVQFSSDGSKII 121
+EAV S + Y+ SAS K + T T +T M + T + D + I
Sbjct: 835 EEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFH-PQDNNIIA 893
Query: 122 TASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGE 180
DD +++++ + S GH+ + SN +++ S D +WN D E
Sbjct: 894 IGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWE 952
Score = 34.3 bits (75), Expect = 0.39
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 23 AITALYYNPNDQQIATSSLDNSVL-LWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASA 81
A T L ++P D I +D+S + ++++R + +GH + + + FS+ + S+
Sbjct: 878 AATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSS 937
Query: 82 SRDKTVRIW 90
D + +W
Sbjct: 938 GADAQLCVW 946
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 56.0 bits (129), Expect = 1e-07
Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 23/258 (8%)
Query: 18 KGHKNAITAL--YYNPNDQQIATSSLDNSVLLW--DLRGTMRSYRFQGHDEAVMDVTFSS 73
+GH+ + ++ +Y N Q I +++LD + W D G+ Y G M +S+
Sbjct: 503 EGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTM--AYSA 560
Query: 74 SGKYMASASRDKTVRIWVPTVTGSTGMFKA-----HSQTVRSVQFSSDGSKIITASDDKV 128
G + S K ++ S G K H +++ VQF + ++ + A DD
Sbjct: 561 DGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFS 620
Query: 129 VKLWSTHKHKFISSFVGHTNWVRCARM--SNDGSIIASCSDDKSTKLW-NLDSGECIHTY 185
+K W + +++ G R+ + +GS++A ++ K+ N D +HT+
Sbjct: 621 IKFWDMDAVQLLTAIDGDGGLQASPRIRFNKEGSLLAVSGNENVIKIMANSDGLRLLHTF 680
Query: 186 KDLKGHGLHLAWHP-SGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGS 244
+++ A + + A ATS G+ R+ N+V ++ ++ V + P
Sbjct: 681 ENISSESSKPAINSIAAAAAAAATSAGHAD----RSANVVSIQGMNGDSRNMVDVKP--- 733
Query: 245 YILTASKDGKMKILDLLE 262
++T + K KI L E
Sbjct: 734 -VITEESNDKSKIWKLTE 750
Score = 50.8 bits (116), Expect = 4e-06
Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 17/239 (7%)
Query: 85 KTVRIWVPTVTG---STGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTH------ 135
KT ++W + + K +V V +S DGS A +V+L+S H
Sbjct: 394 KTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMR 453
Query: 136 KHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHL 195
+H I + VG N + + + +I +C DDK+ K+W+ +G HT++ + +
Sbjct: 454 QHLEIDAHVGGVNDISFSTPNKQLCVI-TCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Query: 196 AWH--PSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILT--ASK 251
H + ++ G +K + Y T +A G+ + + SK
Sbjct: 513 CPHYKENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSK 572
Query: 252 DGKMKILDL--LEGHPIFTLSG-HNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDL 307
DG+ I++ EG T G H + V F T + + +AGDD + W + L
Sbjct: 573 DGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQL 631
Score = 50.0 bits (114), Expect = 7e-06
Identities = 33/172 (19%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 16 QLKGHKNAITALYYN-PNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT--F 71
++ H + + ++ PN Q + T D ++ +WD ++ + F+GH+ V V +
Sbjct: 457 EIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHY 516
Query: 72 SSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKII---TASD-DK 127
+ +++ S + D ++ W+ GS + A + ++ +S+DG+++ T+ D +
Sbjct: 517 KENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGES 576
Query: 128 VVKLWSTHKHKFISSFVG-HTNWVRCARMSNDGSIIASCSDDKSTKLWNLDS 178
+ W+ + ++ G H + + + + DD S K W++D+
Sbjct: 577 FIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDA 628
Score = 37.5 bits (83), Expect = 0.042
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 206 VATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGK-MKILDLLEGH 264
++ S G + L+++ T + + A T +A HP + I+ D ++I ++
Sbjct: 851 MSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE 910
Query: 265 PIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
L GH+ + + FS + S+G D + +W T+
Sbjct: 911 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTD 949
Score = 35.1 bits (77), Expect = 0.23
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 2/119 (1%)
Query: 63 DEAVMDVTFSSSGKYMASASRDKTVRIWVPTV-TGSTGMFKAHSQTVRSVQFSSDGSKII 121
+EAV S + Y+ SAS K + T T +T M + T + D + I
Sbjct: 835 EEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFH-PQDNNIIA 893
Query: 122 TASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGE 180
DD +++++ + S GH+ + SN +++ S D +WN D E
Sbjct: 894 IGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWE 952
Score = 34.3 bits (75), Expect = 0.39
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 23 AITALYYNPNDQQIATSSLDNSVL-LWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASA 81
A T L ++P D I +D+S + ++++R + +GH + + + FS+ + S+
Sbjct: 878 AATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSS 937
Query: 82 SRDKTVRIW 90
D + +W
Sbjct: 938 GADAQLCVW 946
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 55.6 bits (128), Expect = 1e-07
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA 79
H +A+++L + + +SS D ++ +W + + HD+A+ V S +
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV-MSGFDDLVF 292
Query: 80 SASRDKTVRIWVPTVTGS------TGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
+ S D TV++W + G + V ++ S S + S D +V W
Sbjct: 293 TGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWE 352
Query: 134 THKHKFISSFV-GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIH-TYKDLKGH 191
K F + GH + V C ++ G+++ S S DK+ +W D + H L GH
Sbjct: 353 RSKRSFTGGILKGHKSAVLCLGIA--GNLLLSGSADKNICVWRRDPSDKSHQCLSVLTGH 410
Score = 36.3 bits (80), Expect = 0.098
Identities = 39/177 (22%), Positives = 69/177 (38%), Gaps = 20/177 (11%)
Query: 146 HTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGEC---IHTYKDLKGHGLHLAWHPSGC 202
H + V + + ++ S S D + K+W + +C IH + D ++
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDD----AINSVMSGFDD 289
Query: 203 YVAVATSHGNVKLYDIRT------HNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMK 256
V ++ G VK++ H L Q AVT +A+ S + S DG +
Sbjct: 290 LVFTGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVN 349
Query: 257 ILDLLEGHPIFT---LSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSE 310
+ FT L GH V + + G+ S DK + +W+ + +D S +
Sbjct: 350 YWE--RSKRSFTGGILKGHKSAVLCLGIA--GNLLLSGSADKNICVWRRDPSDKSHQ 402
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 54.8 bits (126), Expect = 3e-07
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 20/215 (9%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTFSSSGKY 77
GH++ + +L +N + + T +D ++ D+R + GH E V + +S SGK
Sbjct: 175 GHESRVGSLAWN--NHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGKK 232
Query: 78 MASASRDKTVRIWVPTVTGSTG-------MFKAHSQTVRSVQFSSDGSKIITAS---DDK 127
+AS D V IW S+ F+ H+ VR++ + + ++ D
Sbjct: 233 LASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDG 292
Query: 128 VVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCS-DDKSTKLWNLDSGECIHTYK 186
+K W+TH ++S + ++ +++S LW S +
Sbjct: 293 KIKFWNTHTGACLNSVETGSQVCSLLWSKSERELLSSHGFTQNQLTLWKYPS---MVKMA 349
Query: 187 DLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDI 218
+L GH L +A P GC VA A ++L+++
Sbjct: 350 ELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 384
Score = 44.4 bits (100), Expect = 4e-04
Identities = 57/277 (20%), Positives = 107/277 (38%), Gaps = 19/277 (6%)
Query: 40 SLDNSVLLWDLRG--TMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGS 97
+L ++V LWD T + + V + ++ G +A + V++W
Sbjct: 109 ALGDTVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQ 168
Query: 98 TGMFKA-HSQTVRSVQFSSDGSKIITAS--DDKVVKLWSTHKHKFISSFVGHTNWVRCAR 154
+ H V S+ +++ I+T D K+V + + +++GHT V +
Sbjct: 169 VRTLRGGHESRVGSLAWNNH---ILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLK 225
Query: 155 MSNDGSIIASCSDDKSTKLWNLDS-------GECIHTYKDLKGHGLHLAWHP-SGCYVAV 206
S G +AS +D +W+ S + +H +++ LAW P +A
Sbjct: 226 WSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLAT 285
Query: 207 ATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPI 266
G+ K+ TH S+ + + L +S L L + +
Sbjct: 286 GGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSKSERELLSSHGFTQNQLTLWKYPSM 345
Query: 267 FTLSGHNGPVNAVNF---SPTGDTFSSAGDDKLVFIW 300
++ NG + V F SP G T +SA D+ + +W
Sbjct: 346 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLW 382
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 54.8 bits (126), Expect = 3e-07
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTFSSSGKY 77
GH++ + +L ++ + + T +D ++ D+R + GH E V + +S SG
Sbjct: 209 GHESRVGSLAWD--NHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGNK 266
Query: 78 MASASRDKTVRIWVPTVTGS------TGMFKAHSQTVRSVQFSSDGSKIITAS---DDKV 128
AS D V IW ++ S F+ H+ VR++ + + ++ D
Sbjct: 267 QASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGK 326
Query: 129 VKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCS-DDKSTKLWNLDSGECIHTYKD 187
+K W+TH ++S + ++ +++S LW S + +
Sbjct: 327 IKFWNTHTGACLNSVETGSQVCSLLWSQSERELLSSHGFTQNQLTLWKYPS---MSKMAE 383
Query: 188 LKGHG---LHLAWHPSGCYVAVATSHGNVKLYDI 218
L GH L +A P+GC VA A N++L+++
Sbjct: 384 LNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 417
Score = 44.4 bits (100), Expect = 4e-04
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 173 LWNLDSGEC--IHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIH 230
LW+ SG + T + KG + W G +AV + V+L+D ++ V+ ++
Sbjct: 150 LWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVR--TLR 207
Query: 231 NEAVTQVAIHPSGSYILTAS-KDGKMKILDL-LEGHPIFTLSGHNGPVNAVNFSPTGDTF 288
++V ++ILT DGK+ D+ + + T GH V + +S +G+
Sbjct: 208 GGHESRVGSLAWDNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGNKQ 267
Query: 289 SSAGDDKLVFIW 300
+S G+D +V IW
Sbjct: 268 ASGGNDNVVHIW 279
Score = 40.3 bits (90), Expect = 0.006
Identities = 56/275 (20%), Positives = 103/275 (37%), Gaps = 16/275 (5%)
Query: 40 SLDNSVLLWDLRG--TMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGS 97
+L ++V LWD T V + ++ G +A + V++W
Sbjct: 143 ALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQ 202
Query: 98 TGMFKA-HSQTVRSVQFSSDGSKIITAS-DDKVVKLWSTHKHKFISSFVGHTNWVRCARM 155
+ H V S+ + D + T D K+V + + +++GHT V +
Sbjct: 203 VRTLRGGHESRVGSLAW--DNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKW 260
Query: 156 SNDGSIIASCSDDKSTKLWNLD------SGECIHTYKDLKGHGLHLAWHP-SGCYVAVAT 208
S G+ AS +D +W+ + + +H +++ LAW P +A
Sbjct: 261 SESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGG 320
Query: 209 SHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFT 268
G+ K+ TH S+ + + L +S L L + +
Sbjct: 321 GVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQSERELLSSHGFTQNQLTLWKYPSMSK 380
Query: 269 LSGHNGPVNAVNF---SPTGDTFSSAGDDKLVFIW 300
++ NG + V F SP G T +SA D+ + +W
Sbjct: 381 MAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLW 415
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 54.8 bits (126), Expect = 3e-07
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 11/191 (5%)
Query: 36 IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW-VPTV 94
I + V +WDL+ + + +GH + V ++ +++AS S + + + +
Sbjct: 108 ICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASG 167
Query: 95 TGSTGMFKAHSQTVRSVQFS-SDGSKIITASDDKVVKLWST----HKHKFISSFVGHTNW 149
+T + + Q +R + +S S ++TA DD V LW T K ++ T
Sbjct: 168 ARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAG 227
Query: 150 VRCARMSNDGSIIASCSDDKSTKLWNLDSG-ECIHTYKDLKGHGLHLAWHPSGCYVAVAT 208
V C SN+ IIAS DK KL+ DSG + + LA+ +G + T
Sbjct: 228 V-CFSPSNE-KIIASVGMDK--KLYTYDSGSRRSSSCIAYEAPFSSLAFGDNGYILVAGT 283
Query: 209 SHGNVKLYDIR 219
S+G V YDIR
Sbjct: 284 SNGRVVFYDIR 294
Score = 52.4 bits (120), Expect = 1e-06
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 12 CLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMD-VT 70
C+KK LKGH + IT + YN D+ +A+ S+ +++ +L R+ + + V+ +
Sbjct: 127 CIKK-LKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQVLRLLD 185
Query: 71 FSSSGKY-MASASRDKTVRIWVPT-VTGSTGMFKAHSQTVRSVQFSSDGSKIITA 123
+S S ++ + +A D TV +W T + K HS V FS KII +
Sbjct: 186 YSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIAS 240
Score = 50.0 bits (114), Expect = 7e-06
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 16/209 (7%)
Query: 65 AVMDVTFSSSGKYMASASRDKTVRIW---------VPTVTGSTGMFKAHSQTVRSVQFSS 115
AV V ++ + +AS DK + +W VP VTG G A + + ++ FS
Sbjct: 45 AVNSVKWNHTNLVVASTGEDKKISLWRKNGQSLGTVP-VTGKDGGDSAE-ECLSAISFSK 102
Query: 116 DGSKII-TASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLW 174
GS+ I + ++VK+W + I GHT+ + + +AS S +
Sbjct: 103 KGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVH 162
Query: 175 NLDSGECIHTYKDLKGHGLHLA-WHPSGCYVAV-ATSHGNVKLYDIRTHN-LVQYYSIHN 231
NL SG KD G L L + S ++ V A G V L+D + + + H+
Sbjct: 163 NLASGARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHS 222
Query: 232 EAVTQVAIHPSGSYIL-TASKDGKMKILD 259
V PS I+ + D K+ D
Sbjct: 223 APTAGVCFSPSNEKIIASVGMDKKLYTYD 251
Score = 35.9 bits (79), Expect = 0.13
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 10 EPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRG-TMRSYRFQGHD----- 63
+PC+ A+ ++ +N + +A++ D + LW G ++ + G D
Sbjct: 32 DPCVLSYTPSPGCAVNSVKWNHTNLVVASTGEDKKISLWRKNGQSLGTVPVTGKDGGDSA 91
Query: 64 -EAVMDVTFSSSG-KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKII 121
E + ++FS G +Y+ S + V+IW K H+ T+ V ++ +
Sbjct: 92 EECLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLA 151
Query: 122 TAS 124
+ S
Sbjct: 152 SVS 154
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 54.8 bits (126), Expect = 3e-07
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 12/209 (5%)
Query: 98 TGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSN 157
T ++ HS V + + D + +AS D+ VK+W H K I S H + V +
Sbjct: 128 TALWIKHSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAE 187
Query: 158 DGSIIASCSDDKSTKLW--NLDSGECIHTYKD--LKGHGLHLAWHPSGCYVAVATSHGNV 213
S++ + S D + K+W + H+ LK A S V +S G V
Sbjct: 188 --SLVFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMAVYSGSSDGAV 245
Query: 214 KLYDIRTHNLVQYYSIHNE-AVTQVAIHPSGSYILTASKDGKMKILDLLEG--HP-IFTL 269
+++ L+++ + + + + I +G + + + D K+ + EG H + L
Sbjct: 246 NFWEMGDKKLLKHCEVFKKHRLAVLCIAAAGKLLFSGAADKKICVW-RREGKVHTCVSVL 304
Query: 270 SGHNGPVNAVN-FSPTGDTFSSAGDDKLV 297
+GH GPV + P+G GD +LV
Sbjct: 305 TGHTGPVKCLAVVEPSGGEEEDGGDGRLV 333
Score = 43.6 bits (98), Expect = 6e-04
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 14/180 (7%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA 79
H +A++ L + + ++S D +V +W + + HD+AV VT + S +
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAESLVFTG 193
Query: 80 SASRDKTVRIWVPTVTG---STGMFKAHSQTVRSV-QFSSDGSKIITASDDKVVKLWSTH 135
SA D TV++W + G + +F+ + +V + + + S D V W
Sbjct: 194 SA--DGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMAVYSGSSDGAVNFWEMG 251
Query: 136 KHKFISS---FVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHT-YKDLKGH 191
K + F H V C ++ G ++ S + DK +W + +HT L GH
Sbjct: 252 DKKLLKHCEVFKKHRLAVLC--IAAAGKLLFSGAADKKICVWRREGK--VHTCVSVLTGH 307
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 54.4 bits (125), Expect = 3e-07
Identities = 63/285 (22%), Positives = 112/285 (39%), Gaps = 20/285 (7%)
Query: 17 LKGHKNAITALYYNPNDQQI-ATSSLDNSVLLWDL--RGTMRSYRFQGHDEAVMDVTFSS 73
L GH A+TA+ ++ + + A++ LD +V +W++ + F H+ V DV +S
Sbjct: 156 LTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSK 215
Query: 74 SGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDK-VVKLW 132
G + S D T R++ T FK + V V+F D + + K ++LW
Sbjct: 216 QGLSLLSCGYDCTSRLFDVERGVETQSFK-EDEVVGVVKFHPDNCNVFLSGGSKGSLRLW 274
Query: 133 STHKHKFISSFVGHTNWVRCARMSNDGSIIASCSD-------DKSTKLWNLDSGECIHTY 185
+KF+ +V + G S SD + + +W++ +
Sbjct: 275 DIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDISREVPLSNQ 334
Query: 186 KDLKGHGLH-LAWHPSGCYVAVATSHGN-VKLYDIRT-HNLVQYYSIHNEAVTQVAIH-- 240
++ + + HP V +A SHGN ++ L +Y V I
Sbjct: 335 VYVEAYTCPCIKRHPQDP-VFIAQSHGNYTAIFSTNPPFKLNKYKRFEGHWVAGFPIKCN 393
Query: 241 --PSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSP 283
P G + + S DG + + D I L + P V++ P
Sbjct: 394 FSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHP 438
Score = 40.3 bits (90), Expect = 0.006
Identities = 49/264 (18%), Positives = 110/264 (41%), Gaps = 19/264 (7%)
Query: 14 KKQLKG--HKNA-ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT 70
KK+++ H NA + + ++ + + D + L+D+ + + F+ DE V V
Sbjct: 195 KKKVRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFK-EDEVVGVVK 253
Query: 71 FSSSG-KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASD---- 125
F S ++R+W + + V+F + G + I++SD
Sbjct: 254 FHPDNCNVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGR 313
Query: 126 ---DKVVKLWSTHKHKFISSFVGHTNWV-RCARMSNDGSIIASCSDDKSTKLWNLDSGEC 181
+ V +W + +S+ V + C + + + S T +++ +
Sbjct: 314 NISENAVIVWDISREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFK 373
Query: 182 IHTYKDLKGHG-----LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQ 236
++ YK +GH + + P G +A +S G+V +YD ++ L++ + +
Sbjct: 374 LNKYKRFEGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVN 433
Query: 237 VAIHPSGSYILTA-SKDGKMKILD 259
V+ HP ++ A S +G++ + +
Sbjct: 434 VSYHPVLPNVVAACSWNGQVSVFE 457
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 54.4 bits (125), Expect = 3e-07
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 113 FSSDGSKIITASDDKVVKLWSTHKHKFISSFVGH--TNWVRCARMSNDGSIIASCSDDKS 170
FSSDG + + D VK+ K + GH T WV I+AS S D
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV-VRFHPRHSEIVASGSLDHE 169
Query: 171 TKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSH 210
+LWN +GECI T+ D +A+H G +AVA+ H
Sbjct: 170 VRLWNAKTGECIRTH-DFYRPIASIAFHAGGELLAVASGH 208
Score = 37.5 bits (83), Expect = 0.042
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 12 CLKKQLKGHKNAITALYYNPNDQQI-ATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT 70
CLK L GH+ + ++P +I A+ SLD+ V LW+ + T R + +
Sbjct: 137 CLKI-LTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAK-TGECIRTHDFYRPIASIA 194
Query: 71 FSSSGKYMASASRDKTVRIW 90
F + G+ +A AS K + IW
Sbjct: 195 FHAGGELLAVASGHK-LHIW 213
Score = 37.1 bits (82), Expect = 0.056
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 153 ARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGC-YVAVATSHG 211
A S+DG +AS D + K+ + ++G+C+ + + +HP VA +
Sbjct: 109 AAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDH 168
Query: 212 NVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTAS 250
V+L++ +T ++ + + + +A H G + AS
Sbjct: 169 EVRLWNAKTGECIRTHDFY-RPIASIAFHAGGELLAVAS 206
Score = 32.7 bits (71), Expect = 1.2
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 71 FSSSGKYMASASRDKTVRIWVPTVTGS-TGMFKAHSQTVRSVQFSSDGSKII-TASDDKV 128
FSS G+ +AS D TV+I + TG + H +T V+F S+I+ + S D
Sbjct: 111 FSSDGRTLASTHGDHTVKI-IDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHE 169
Query: 129 VKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSG 179
V+LW+ + I + + + G ++A S K +W+ + G
Sbjct: 170 VRLWNAKTGECIRTHDFYRP-IASIAFHAGGELLAVASGHK-LHIWHYNKG 218
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 54.4 bits (125), Expect = 3e-07
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 113 FSSDGSKIITASDDKVVKLWSTHKHKFISSFVGH--TNWVRCARMSNDGSIIASCSDDKS 170
FSSDG + + D VK+ K + GH T WV I+AS S D
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV-VRFHPRHSEIVASGSLDHE 169
Query: 171 TKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSH 210
+LWN +GECI T+ D +A+H G +AVA+ H
Sbjct: 170 VRLWNAKTGECIRTH-DFYRPIASIAFHAGGELLAVASGH 208
Score = 37.5 bits (83), Expect = 0.042
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 12 CLKKQLKGHKNAITALYYNPNDQQI-ATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT 70
CLK L GH+ + ++P +I A+ SLD+ V LW+ + T R + +
Sbjct: 137 CLKI-LTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAK-TGECIRTHDFYRPIASIA 194
Query: 71 FSSSGKYMASASRDKTVRIW 90
F + G+ +A AS K + IW
Sbjct: 195 FHAGGELLAVASGHK-LHIW 213
Score = 37.1 bits (82), Expect = 0.056
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 153 ARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGC-YVAVATSHG 211
A S+DG +AS D + K+ + ++G+C+ + + +HP VA +
Sbjct: 109 AAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDH 168
Query: 212 NVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTAS 250
V+L++ +T ++ + + + +A H G + AS
Sbjct: 169 EVRLWNAKTGECIRTHDFY-RPIASIAFHAGGELLAVAS 206
Score = 32.7 bits (71), Expect = 1.2
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 71 FSSSGKYMASASRDKTVRIWVPTVTGS-TGMFKAHSQTVRSVQFSSDGSKII-TASDDKV 128
FSS G+ +AS D TV+I + TG + H +T V+F S+I+ + S D
Sbjct: 111 FSSDGRTLASTHGDHTVKI-IDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHE 169
Query: 129 VKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSG 179
V+LW+ + I + + + G ++A S K +W+ + G
Sbjct: 170 VRLWNAKTGECIRTHDFYRP-IASIAFHAGGELLAVASGHK-LHIWHYNKG 218
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 54.0 bits (124), Expect = 5e-07
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 37/277 (13%)
Query: 17 LKGHKNAITAL-YYNPNDQQ---IATSSLDNSVLLW--------DLRGTMRSYRF-QGHD 63
L+GH AI+++ N ND + +AT+S D ++ L+ D +R+Y+ +GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 64 EAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITA 123
+V V+ SG + S+S D T+ +W + S G S +V+ + ++ +
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWNTNESTSEG----ESVSVKKRKGNNQAEE---- 257
Query: 124 SDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIH 183
S + + ++S VGHT V + + +I S S D S + W++++G+
Sbjct: 258 ---------SQSEGEAVTSLVGHTQCVSSV-VWPEHDVIYSSSWDHSVRRWDVETGKDSL 307
Query: 184 TYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIR---THNLVQYYSIHNEAVTQVAIH 240
K S +A S ++++D R T V +S H+ ++ H
Sbjct: 308 NLFCGKALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWH 367
Query: 241 PSG-SYILTASKDGKMKILDLLEGHPIFTLSGHNGPV 276
S ++L+AS DGK+ + DL + T H+ P+
Sbjct: 368 KSSWFHLLSASYDGKIMLWDLRTA--VMTKHTHSFPL 402
Score = 35.9 bits (79), Expect = 0.13
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 62 HDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQF--SSDGSK 119
HD+ V V SS +++ + D R+W + + + + HS + SV S+D
Sbjct: 109 HDDWVSAVN-GSSPRFILTGCYDGLGRVW-SSAGSCSHILEGHSGAISSVALVNSNDAET 166
Query: 120 II--TASDDKVVKLW---------STHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDD 168
+ TAS D+ ++L+ ST K + GH V+ G+++ S S D
Sbjct: 167 VTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWD 226
Query: 169 KSTKLWN 175
+ LWN
Sbjct: 227 CTINLWN 233
Score = 30.3 bits (65), Expect = 6.4
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 16/105 (15%)
Query: 230 HNEAVTQVAIHPSGSY----ILTASKDGKMKIL--DLLEGHPIFT-------LSGHNGPV 276
H+ A++ VA+ S + TASKD +++ D E T L GH V
Sbjct: 149 HSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASV 208
Query: 277 NAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSES---KENEGQN 318
+V+ +G+ S+ D + +W TN + ES K+ +G N
Sbjct: 209 QSVSAQKSGNMVCSSSWDCTINLWNTNESTSEGESVSVKKRKGNN 253
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 54.0 bits (124), Expect = 5e-07
Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 22/269 (8%)
Query: 64 EAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGST--GMFKA---HSQTVRSVQFSSDGS 118
+++ ++FS + + S D VR W + +G++ KA H Q V + DG+
Sbjct: 26 DSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGT 85
Query: 119 KIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDS 178
+ + DK K+W + H + +++A+ S DK+ K W+
Sbjct: 86 TVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQ 145
Query: 179 GECIHTYK-DLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQ- 236
+HT + K + L + HP + V T+ N+ +++++ ++ I + Q
Sbjct: 146 QNPVHTQQLPDKCYTLSVK-HP---LMVVGTADRNLIVFNLQNPQ-TEFKRIQSPLKYQT 200
Query: 237 --VAIHPSGSYILTASKDGKMKI--LDLLEGHPIFTLSGHNG-----PVNAVNFSPTGDT 287
V P L S +G++ + LD + FT H VN++NF P T
Sbjct: 201 RCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGNDIYSVNSLNFHPVHGT 260
Query: 288 FSSAGDDKLVFIW-KTNFTDLSSESKENE 315
F++AG D W K + L + S+ N+
Sbjct: 261 FATAGSDGAFNFWDKDSKQRLKAMSRCNQ 289
Score = 49.6 bits (113), Expect = 1e-05
Identities = 57/287 (19%), Positives = 115/287 (40%), Gaps = 23/287 (8%)
Query: 22 NAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQ-----GHDEAVMDVTFSSSGK 76
++I++L ++P + +S DN V W++ + S HD+ V+ + G
Sbjct: 26 DSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGT 85
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKA-HSQTVRSVQFSSDGSKIITASDDKVVKLWSTH 135
+ S DK ++W P ++G + A H + ++ + + + T S DK +K W T
Sbjct: 86 TVFSGGCDKQAKMW-PLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTR 144
Query: 136 KHKFISSFVGHTNWV--RCARMSNDGSIIASCSDDKSTKLWNLDS--GECIHTYKDLKGH 191
+ + HT + +C +S ++ + D++ ++NL + E LK
Sbjct: 145 QQNPV-----HTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQ 199
Query: 192 GLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSI--HNE-----AVTQVAIHPSGS 244
+ P V + G V ++ + + ++ H + +V + HP
Sbjct: 200 TRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGNDIYSVNSLNFHPVHG 259
Query: 245 YILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSA 291
TA DG D + +S N P+ +F+ G ++ A
Sbjct: 260 TFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDGSIYAYA 306
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 54.0 bits (124), Expect = 5e-07
Identities = 42/213 (19%), Positives = 100/213 (46%), Gaps = 15/213 (7%)
Query: 16 QLKGHKNAITALYYN-PNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT--F 71
++ H + + ++ PN Q + T D ++ +WD ++ Y F+GH+ V + +
Sbjct: 457 EIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHY 516
Query: 72 SSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKII---TASD-DK 127
+ +++ S + D ++ W+ GS ++A + ++ +S+DG+++ T+ D +
Sbjct: 517 KENIQFIFSTALDGKIKAWLYDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGES 576
Query: 128 VVKLWSTHKHKFISSFVG-HTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYK 186
+ W+ + ++ G H + + + + DD S K W++D+ + + T
Sbjct: 577 FIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLL-TAI 635
Query: 187 DLKGHGL----HLAWHPSGCYVAVATSHGNVKL 215
D G GL + ++ G +AV+ + +K+
Sbjct: 636 DADG-GLQASPRIRFNKEGSLLAVSANDNMIKV 667
Score = 37.5 bits (83), Expect = 0.042
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 206 VATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGK-MKILDLLEGH 264
++ S G + L+++ T + + A T +A HP + I+ D ++I ++
Sbjct: 840 MSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE 899
Query: 265 PIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
L GH+ + + FS + S+G D + +W T+
Sbjct: 900 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTD 938
Score = 35.1 bits (77), Expect = 0.23
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 2/119 (1%)
Query: 63 DEAVMDVTFSSSGKYMASASRDKTVRIWVPTV-TGSTGMFKAHSQTVRSVQFSSDGSKII 121
+EAV S + Y+ SAS K + T T +T M + T + D + I
Sbjct: 824 EEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFH-PQDNNIIA 882
Query: 122 TASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGE 180
DD +++++ + S GH+ + SN +++ S D +WN D E
Sbjct: 883 IGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWE 941
Score = 34.7 bits (76), Expect = 0.30
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Query: 197 WHPSGCYVAVATSHGNVKLYDIRT-HNLVQYYSI--HNEAVTQVAIH-PSGSYILTASKD 252
W P G VA S V+LY ++ Q+ I H V +A P+ +T D
Sbjct: 425 WSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCGD 484
Query: 253 GK-MKILDLLEGHPIFTLSGHNGPVNAV 279
K +K+ D G +T GH PV ++
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSI 512
Score = 34.3 bits (75), Expect = 0.39
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 23 AITALYYNPNDQQIATSSLDNSVL-LWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASA 81
A T L ++P D I +D+S + ++++R + +GH + + + FS+ + S+
Sbjct: 867 AATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSS 926
Query: 82 SRDKTVRIW 90
D + +W
Sbjct: 927 GADAQLCVW 935
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 54.0 bits (124), Expect = 5e-07
Identities = 42/213 (19%), Positives = 100/213 (46%), Gaps = 15/213 (7%)
Query: 16 QLKGHKNAITALYYN-PNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT--F 71
++ H + + ++ PN Q + T D ++ +WD ++ Y F+GH+ V + +
Sbjct: 457 EIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHY 516
Query: 72 SSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKII---TASD-DK 127
+ +++ S + D ++ W+ GS ++A + ++ +S+DG+++ T+ D +
Sbjct: 517 KENIQFIFSTALDGKIKAWLYDNMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGES 576
Query: 128 VVKLWSTHKHKFISSFVG-HTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYK 186
+ W+ + ++ G H + + + + DD S K W++D+ + + T
Sbjct: 577 FIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQLL-TAI 635
Query: 187 DLKGHGL----HLAWHPSGCYVAVATSHGNVKL 215
D G GL + ++ G +AV+ + +K+
Sbjct: 636 DADG-GLQASPRIRFNKEGSLLAVSANDNMIKV 667
Score = 37.5 bits (83), Expect = 0.042
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 206 VATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGK-MKILDLLEGH 264
++ S G + L+++ T + + A T +A HP + I+ D ++I ++
Sbjct: 840 MSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE 899
Query: 265 PIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
L GH+ + + FS + S+G D + +W T+
Sbjct: 900 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTD 938
Score = 35.1 bits (77), Expect = 0.23
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 2/119 (1%)
Query: 63 DEAVMDVTFSSSGKYMASASRDKTVRIWVPTV-TGSTGMFKAHSQTVRSVQFSSDGSKII 121
+EAV S + Y+ SAS K + T T +T M + T + D + I
Sbjct: 824 EEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFH-PQDNNIIA 882
Query: 122 TASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGE 180
DD +++++ + S GH+ + SN +++ S D +WN D E
Sbjct: 883 IGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWE 941
Score = 34.7 bits (76), Expect = 0.30
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Query: 197 WHPSGCYVAVATSHGNVKLYDIRT-HNLVQYYSI--HNEAVTQVAIH-PSGSYILTASKD 252
W P G VA S V+LY ++ Q+ I H V +A P+ +T D
Sbjct: 425 WSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCGD 484
Query: 253 GK-MKILDLLEGHPIFTLSGHNGPVNAV 279
K +K+ D G +T GH PV ++
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSI 512
Score = 34.3 bits (75), Expect = 0.39
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 23 AITALYYNPNDQQIATSSLDNSVL-LWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASA 81
A T L ++P D I +D+S + ++++R + +GH + + + FS+ + S+
Sbjct: 867 AATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSS 926
Query: 82 SRDKTVRIW 90
D + +W
Sbjct: 927 GADAQLCVW 935
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 54.0 bits (124), Expect = 5e-07
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 8/185 (4%)
Query: 103 AHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNW-VRCARMSNDGSI 161
A + TV + S ++ITA++D ++++ +S F +W V +S DG +
Sbjct: 205 AITNTVDIYRDPSGSLRLITANNDCKIRVFDAQSFTRVSEFA--LDWSVNNTSVSPDGKL 262
Query: 162 IASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTH 221
+A D + + SG+ I + + K + AWHP+G +A +L+DIR
Sbjct: 263 LAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIR-- 320
Query: 222 NLVQYYSI---HNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNA 278
N + +++ + A+ + P G ++ A + I D G G +
Sbjct: 321 NPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSGFLQSQEIDLFGEIAG 380
Query: 279 VNFSP 283
++FSP
Sbjct: 381 ISFSP 385
Score = 44.8 bits (101), Expect = 3e-04
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTFSSSG 75
L+GHK+ A ++PN +AT + D + LWD+R S+ +G+ A+ + F+ G
Sbjct: 286 LRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEG 345
Query: 76 KYMASASRDKTVRIW 90
+++A A V I+
Sbjct: 346 RFLAMAEPADFVHIF 360
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 199 PSGCY-VAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
PSG + A + ++++D ++ V +++ + +V ++ P G + + I
Sbjct: 216 PSGSLRLITANNDCKIRVFDAQSFTRVSEFAL-DWSVNNTSVSPDGKLLAVVGDSTECLI 274
Query: 258 LDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
D G I +L GH A + P G ++ D +W
Sbjct: 275 SDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLW 317
Score = 31.1 bits (67), Expect = 3.7
Identities = 19/106 (17%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 30 NPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRI 89
+P+ + +A L+ D +GH + + +G +A+ ++D R+
Sbjct: 257 SPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRL 316
Query: 90 W-VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
W + + S + K + +R ++F+ +G + A V ++ T
Sbjct: 317 WDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDT 362
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 53.6 bits (123), Expect = 6e-07
Identities = 62/276 (22%), Positives = 119/276 (43%), Gaps = 39/276 (14%)
Query: 36 IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASA---SRDKTVRIWVP 92
IA+SS+D + WDL+ +F+ +T + K++AS+ +R+ + I+
Sbjct: 6 IASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLT-AVGEKFLASSQLSARNTSGSIFYW 64
Query: 93 TVTGSTGMFKAHS-QTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVR 151
+ T K++ + ++++ +++G+ ++ + LW K + + GH V
Sbjct: 65 SWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVT 124
Query: 152 CARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHG 211
C S D S++ S S D S ++W+L I + D + G
Sbjct: 125 CLVFSGDDSLLVSGSQDGSIRVWSL-----IRLFDDFQ------------------RQQG 161
Query: 212 NVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSG--SYILTASKDGKMKILDLLEGHPIFTL 269
N LY+ HN ++ H +VT + I G + I+++S+D K+ L G + +
Sbjct: 162 NT-LYE---HN----FNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNI 213
Query: 270 SGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFT 305
+NA+ P G F + D ++I N T
Sbjct: 214 I-FPSVINALALDPGGCVFYAGARDSKIYIGAINAT 248
Score = 45.6 bits (103), Expect = 2e-04
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 13/134 (9%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASR 83
I AL N + + + LW++ ++ GH +V + FS + S S+
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 84 DKTVRIW--------VPTVTGST---GMFKAHSQTVRSVQFSSDG--SKIITASDDKVVK 130
D ++R+W G+T F H+ +V + G + II++S+D+ K
Sbjct: 141 DGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCK 200
Query: 131 LWSTHKHKFISSFV 144
+WS + K + + +
Sbjct: 201 VWSLSRGKLLKNII 214
Score = 44.4 bits (100), Expect = 4e-04
Identities = 41/196 (20%), Positives = 76/196 (38%), Gaps = 19/196 (9%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDL-----------RGTMRSYRFQG 61
L K+ GH ++T L ++ +D + + S D S+ +W L T+ + F
Sbjct: 112 LLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNE 171
Query: 62 HDEAVMDVTFSSSG--KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK 119
H +V D+ G + S+S D+T ++W G + ++ G
Sbjct: 172 HTMSVTDIVIDYGGCNAVIISSSEDRTCKVW-SLSRGKLLKNIIFPSVINALALDPGGCV 230
Query: 120 IIT-ASDDKV----VKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLW 174
A D K+ + S + + + S + C DG+++ S S+D +W
Sbjct: 231 FYAGARDSKIYIGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVW 290
Query: 175 NLDSGECIHTYKDLKG 190
+ S + T KG
Sbjct: 291 DPKSLRHVRTLIHAKG 306
Score = 33.1 bits (72), Expect = 0.91
Identities = 41/214 (19%), Positives = 81/214 (37%), Gaps = 8/214 (3%)
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYKDLKG--HGLHLAWHP--SGCYVAVATSHGNVKL 215
++IAS S D+ W+L +G +K HGL + ++ + G++
Sbjct: 4 TVIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNTSGSI-F 62
Query: 216 YDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGP 275
Y T + S E + +A + G+Y++ G + + ++ G + GH
Sbjct: 63 YWSWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRS 122
Query: 276 VNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEGQNMITGQ-RHLTEEGIDTI 334
V + FS S D + +W + L + + +G + T D +
Sbjct: 123 VTCLVFSGDDSLLVSGSQDGSIRVW--SLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIV 180
Query: 335 TENGQIQDVNILSKKALDYDLRDISEGSLPEDFV 368
+ G V I S + + +S G L ++ +
Sbjct: 181 IDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNII 214
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 53.2 bits (122), Expect = 8e-07
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSY---RFQGHDEAVMDVTFSSSG 75
GH++ + +L +N + + T +D ++ D+R +RS + GH E V + +S SG
Sbjct: 193 GHESRVGSLAWN--NHILTTGGMDGKIVNNDVR--IRSSIIGTYVGHTEEVCGLKWSESG 248
Query: 76 KYMASASRDKTVRIWVPTVTGST------GMFKAHSQTVRSVQFSSDGSKIITAS---DD 126
K +AS D V IW ++ S F+ H+ VR++ + + ++ D
Sbjct: 249 KKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGD 308
Query: 127 KVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCS-DDKSTKLWNLDSGECIHTY 185
+ W+TH ++S + ++ ++++ LW S +
Sbjct: 309 GKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPS---MVKM 365
Query: 186 KDLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDI 218
+L GH L +A P GC VA A ++L+++
Sbjct: 366 AELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 401
Score = 48.4 bits (110), Expect = 2e-05
Identities = 61/283 (21%), Positives = 111/283 (39%), Gaps = 18/283 (6%)
Query: 33 DQQIATSSLDNSVLLWDLRGTMRSYRFQGHDE--AVMDVTFSSSGKYMASASRDKTVRIW 90
++ I L ++V LWD S DE V + ++ G +A + V++W
Sbjct: 120 EEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVW 179
Query: 91 VPTVTGSTGMFKA-HSQTVRSVQFSSDGSKIITAS--DDKVVKLWSTHKHKFISSFVGHT 147
+ H V S+ +++ I+T D K+V + I ++VGHT
Sbjct: 180 DCVSNRHVRTLRGGHESRVGSLAWNNH---ILTTGGMDGKIVNNDVRIRSSIIGTYVGHT 236
Query: 148 NWVRCARMSNDGSIIASCSDDKSTKLWNLD------SGECIHTYKDLKGHGLHLAWHP-S 200
V + S G +AS +D +W+ + + +H +++ LAW P
Sbjct: 237 EEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQ 296
Query: 201 GCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEA-VTQVAIHPSGSYILTAS--KDGKMKI 257
+A G+ K+ TH S+ + V + S +L+A ++ +
Sbjct: 297 ASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTL 356
Query: 258 LDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ L+GH V + SP G T +SA D+ + +W
Sbjct: 357 WKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLW 399
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 53.2 bits (122), Expect = 8e-07
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSY---RFQGHDEAVMDVTFSSSG 75
GH++ + +L +N + + T +D ++ D+R +RS + GH E V + +S SG
Sbjct: 206 GHESRVGSLAWN--NHILTTGGMDGKIVNNDVR--IRSSIVGTYLGHTEEVCGLKWSESG 261
Query: 76 KYMASASRDKTVRIWVPTVTGST-------GMFKAHSQTVRSVQFSSDGSKIITAS---D 125
K +AS V IW S+ F+ H+ VR++ + + ++
Sbjct: 262 KKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWCPFQATLLATGGGVG 321
Query: 126 DKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCS-DDKSTKLWNLDSGECIHT 184
D +K W+TH ++S + + +++S LW S +
Sbjct: 322 DGKIKFWNTHTGACLNSVETGSQVCSLLWSQRERELLSSHGFTQNQLTLWKYPS---MSK 378
Query: 185 YKDLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDI 218
+L GH L +A P+GC VA A N++L+++
Sbjct: 379 MAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 415
Score = 36.7 bits (81), Expect = 0.074
Identities = 59/297 (19%), Positives = 112/297 (37%), Gaps = 20/297 (6%)
Query: 40 SLDNSVLLWDLRG--TMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGS 97
+L ++V LWD T V + ++ G +A + V++W
Sbjct: 140 ALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQ 199
Query: 98 TG-MFKAHSQTVRSVQFSSDGSKIITAS--DDKVVKLWSTHKHKFISSFVGHTNWVRCAR 154
+ H V S+ +++ I+T D K+V + + +++GHT V +
Sbjct: 200 VRTLIGGHESRVGSLAWNNH---ILTTGGMDGKIVNNDVRIRSSIVGTYLGHTEEVCGLK 256
Query: 155 MSNDGSIIASCSDDKSTKLWNLDS-------GECIHTYKDLKGHGLHLAWHP-SGCYVAV 206
S G +AS + +W+ S + +H +++ LAW P +A
Sbjct: 257 WSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWCPFQATLLAT 316
Query: 207 ATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPI 266
G+ K+ TH S+ + + L +S L L + +
Sbjct: 317 GGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQRERELLSSHGFTQNQLTLWKYPSM 376
Query: 267 FTLSGHNGPVNAVNF---SPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEGQNMI 320
++ NG + V F SP G T +SA D+ + +W F + +K+ +N +
Sbjct: 377 SKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV-FGEPPKTTKKAASKNYL 432
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 53.2 bits (122), Expect = 8e-07
Identities = 62/320 (19%), Positives = 134/320 (41%), Gaps = 40/320 (12%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMD---VTF 71
++++ H+ AI A+ ++P+ + +A++ D + +W + + R + HD +D + F
Sbjct: 245 QEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSV---VEDERCEEHDVPKIDPSCIYF 301
Query: 72 SSS----------------GKYMASASRDKTVRIWVP-----TVTGSTGMFKAHSQTVRS 110
S G M+ ++ + +P + F HS +
Sbjct: 302 EVSKLSELRPVAVEKDGITGSLMSPRKTTESACVIIPPKIFRVLDKPLHEFLGHSGDILD 361
Query: 111 VQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSN-DGSIIASCSDDK 169
+ +S + +++++AS D V+LW + F H N+V + + D S S D
Sbjct: 362 ISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIF-SHNNYVTSVQFNPVDDDHFISGSIDG 419
Query: 170 STKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTH--NLVQYY 227
++W+ + + + D +G + + P G V + T + + Y++ H L +
Sbjct: 420 KVRIWSASQCQVVD-WADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNVSGHCLQLDGHI 478
Query: 228 SIHNEAVTQ----VAIH---PSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVN 280
+HN+ + + S ++ AS D +++I+ + S + G + +
Sbjct: 479 CLHNKKKSSNKRIIGFQFDSTDPSRVMVASADSQVRIISGRNVVHKYKGSRNAGNQISAS 538
Query: 281 FSPTGDTFSSAGDDKLVFIW 300
F+ G SA DD V++W
Sbjct: 539 FTADGKHIVSACDDSSVYVW 558
Score = 52.0 bits (119), Expect = 2e-06
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 22/222 (9%)
Query: 57 YRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSS- 115
+ F GH ++D+++S + + + SAS D +VR+W G+F +H+ V SVQF+
Sbjct: 350 HEFLGHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCLGIF-SHNNYVTSVQFNPV 407
Query: 116 DGSKIITASDDKVVKLWSTHKHKFI--SSFVGHTNWVRCARMSNDGSIIASCSDD----- 168
D I+ S D V++WS + + + + G V C + II + + D
Sbjct: 408 DDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAV-CYQPDGQAVIIGTLTSDCRFYN 466
Query: 169 KSTKLWNLDSGECIHTYKDLKGH---GLHL-AWHPSGCYVAVATSHGNVKLYDIRTHNLV 224
S LD C+H K G + PS VA A S + I N+V
Sbjct: 467 VSGHCLQLDGHICLHNKKKSSNKRIIGFQFDSTDPSRVMVASADSQVRI----ISGRNVV 522
Query: 225 QYYSIHNEAVTQV--AIHPSGSYILTASKDGKMKILDLLEGH 264
Y A Q+ + G +I++A D + + + + GH
Sbjct: 523 HKYKGSRNAGNQISASFTADGKHIVSACDDSSVYVWNCV-GH 563
Score = 44.8 bits (101), Expect = 3e-04
Identities = 51/247 (20%), Positives = 95/247 (38%), Gaps = 29/247 (11%)
Query: 49 DLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW------------VPTVTG 96
+L + Q H+ A++ + FS G+Y+ASA D +R+W VP +
Sbjct: 237 ELSALFKGQEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERCEEHDVPKIDP 296
Query: 97 STGMFKAHS-QTVRSVQFSSDGSKIITASDDKVV---------KLWSTHKHKFISSFVGH 146
S F+ +R V DG S K K++ K + F+GH
Sbjct: 297 SCIYFEVSKLSELRPVAVEKDGITGSLMSPRKTTESACVIIPPKIFRV-LDKPLHEFLGH 355
Query: 147 TNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHP-SGCYVA 205
+ + S + ++ S S D S +LW + +C+ + + + ++P +
Sbjct: 356 SGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCLGIFSH-NNYVTSVQFNPVDDDHFI 413
Query: 206 VATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHP 265
+ G V+++ +V + VT V P G ++ + + + + GH
Sbjct: 414 SGSIDGKVRIWSASQCQVVDWADARG-IVTAVCYQPDGQAVIIGTLTSDCRFYN-VSGH- 470
Query: 266 IFTLSGH 272
L GH
Sbjct: 471 CLQLDGH 477
Score = 36.3 bits (80), Expect = 0.098
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 12 CLKKQLKGHKNAITALYYNPND-QQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT 70
CL + K I ++ D ++ +S D+ V + R + Y+ + + +
Sbjct: 479 CLHNKKKSSNKRIIGFQFDSTDPSRVMVASADSQVRIISGRNVVHKYKGSRNAGNQISAS 538
Query: 71 FSSSGKYMASASRDKTVRIW 90
F++ GK++ SA D +V +W
Sbjct: 539 FTADGKHIVSACDDSSVYVW 558
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 53.2 bits (122), Expect = 8e-07
Identities = 27/93 (29%), Positives = 43/93 (46%)
Query: 54 MRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQF 113
+R R + H + + SS G+Y+A+ D+ V IW F H TV + F
Sbjct: 213 LREPRNKNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCF 272
Query: 114 SSDGSKIITASDDKVVKLWSTHKHKFISSFVGH 146
S++ + S D+ VK+W+ FI+ GH
Sbjct: 273 RYGTSELYSGSFDRTVKVWNVEDKAFITENHGH 305
Score = 52.0 bits (119), Expect = 2e-06
Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 5/167 (2%)
Query: 102 KAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSI 161
K HS+ ++ SSDG + T D+ V +W + + +F GH N V C S
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSE 278
Query: 162 IASCSDDKSTKLWNLDSGECIHTYKDLKGH-GLHLAWHPSGCYVAVATSHGNVKLYDIRT 220
+ S S D++ K+WN++ I + GH G LA A+ LY
Sbjct: 279 LYSGSFDRTVKVWNVEDKAFI---TENHGHQGEILAIDALRKERALTVGRDRTMLYHKVP 335
Query: 221 HNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIF 267
+ Y ++ Y L+ S +G + + +L+ P+F
Sbjct: 336 ESTRMIYRAPASSLESCCFISDNEY-LSGSDNGTVALWGMLKKKPVF 381
Score = 45.2 bits (102), Expect = 2e-04
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKY 77
K H AL + + + +AT +D V +WD+R F GH V + F
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSE 278
Query: 78 MASASRDKTVRIW 90
+ S S D+TV++W
Sbjct: 279 LYSGSFDRTVKVW 291
Score = 43.6 bits (98), Expect = 6e-04
Identities = 26/125 (20%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYM 78
GH+N ++ L + ++ + S D +V +W++ GH ++ + + +
Sbjct: 262 GHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQGEILAIDALRKERAL 321
Query: 79 ASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHK 138
+ RD+T+ ++ + +++A + ++ S F SD ++ ++ SD+ V LW K K
Sbjct: 322 -TVGRDRTM-LYHKVPESTRMIYRAPASSLESCCFISD-NEYLSGSDNGTVALWGMLKKK 378
Query: 139 FISSF 143
+ F
Sbjct: 379 PVFVF 383
Score = 37.5 bits (83), Expect = 0.042
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 19/159 (11%)
Query: 141 SSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIH----TYKDLKGHG---- 192
S V H V +S+D S S S D + W++ SG+ + + LK HG
Sbjct: 155 SVIVKHRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLR 214
Query: 193 -----------LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHP 241
L LA G Y+A +V ++D+RT VQ + H V+ +
Sbjct: 215 EPRNKNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRY 274
Query: 242 SGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVN 280
S + + S D +K+ ++ + I GH G + A++
Sbjct: 275 GTSELYSGSFDRTVKVWNVEDKAFITENHGHQGEILAID 313
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 53.2 bits (122), Expect = 8e-07
Identities = 71/300 (23%), Positives = 123/300 (41%), Gaps = 41/300 (13%)
Query: 64 EAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITA 123
+ + ++ FS++ ++ +S DK VR++ + G F H V F D S
Sbjct: 18 DGISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEF-LHGGAVLDCCFHDDFSGFSVG 76
Query: 124 SDDKVVKL-WSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGEC- 181
+D KV ++ ++ K + + H VRC S + + S DK+ K W+
Sbjct: 77 ADYKVRRIVFNVGKEDILGT---HDKAVRCVEYSYAAGQVITGSWDKTVKCWDPRGASGP 133
Query: 182 ----IHTY-KDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYY--SIHNEAV 234
+ TY + + + + L H + VAT+ +V +YD+R + + S
Sbjct: 134 ERTQVGTYLQPERVYSMSLVGHR----LVVATAGRHVNIYDLRNMSQPEQRRESSLKYQT 189
Query: 235 TQVAIHPSGSYILTASKDGK--MKILDLLEGHPI--FTLSGHNG---------PVNAVNF 281
V +P+G+ +S +G+ M+ DL E + H PVN++ F
Sbjct: 190 RCVRCYPNGTGYALSSVEGRVAMEFFDLSEAAQAKKYAFKCHRKSEAGRDIVYPVNSIAF 249
Query: 282 SPTGDTFSSAGDDKLVFIWKTNF-----------TDLSSESKENEGQNMITGQRHLTEEG 330
P TF++ G D V IW N T +S+ S +GQ + + EEG
Sbjct: 250 HPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQLLAVASSYTFEEG 309
Score = 51.6 bits (118), Expect = 2e-06
Identities = 69/304 (22%), Positives = 110/304 (36%), Gaps = 21/304 (6%)
Query: 6 VTTPEPCLKKQLKGH-KNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDE 64
+TT P ++L + I+ L ++ N + SS D V L+D+ F H
Sbjct: 1 MTTVTPSAGRELSNPPSDGISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEFL-HGG 59
Query: 65 AVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS 124
AV+D F S D VR V V G + H + VR V++S ++IT S
Sbjct: 60 AVLDCCFHDDFSGF-SVGADYKVRRIVFNV-GKEDILGTHDKAVRCVEYSYAAGQVITGS 117
Query: 125 DDKVVKLWSTH----------------KHKFISSFVGHTNWVRCARMSNDGSIIASCSDD 168
DK VK W + + S VGH V A + + + S
Sbjct: 118 WDKTVKCWDPRGASGPERTQVGTYLQPERVYSMSLVGHRLVVATAGRHVNIYDLRNMSQP 177
Query: 169 KSTKLWNLD-SGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYY 227
+ + +L C+ Y + G+ L + K Y + H +
Sbjct: 178 EQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEAAQAKKYAFKCHRKSEAG 237
Query: 228 SIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDT 287
V +A HP T DG + I D ++ S + ++A++FS G
Sbjct: 238 RDIVYPVNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQL 297
Query: 288 FSSA 291
+ A
Sbjct: 298 LAVA 301
Score = 35.1 bits (77), Expect = 0.23
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 62 HDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTG----MFKAHSQTVRSVQFSSDG 117
HD+AV V +S + + + S DKTV+ W P G++G + Q R S G
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWDP--RGASGPERTQVGTYLQPERVYSMSLVG 154
Query: 118 SKIITASDDKVVKLW-----STHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTK 172
+++ A+ + V ++ S + + SS T VRC + G ++S + +
Sbjct: 155 HRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRC-YPNGTGYALSSVEGRVAME 213
Query: 173 LWNLDSGECIHTY------KDLKGHGL-----HLAWHPSGCYVAVATSHGNVKLYDIRTH 221
++L Y K G + +A+HP A G V ++D
Sbjct: 214 FFDLSEAAQAKKYAFKCHRKSEAGRDIVYPVNSIAFHPIYGTFATGGCDGFVNIWDGNNK 273
Query: 222 NLVQYYSIHNEAVTQVAIHPSGSYILTAS 250
+ YS + +++ ++ G + AS
Sbjct: 274 KRLYQYSKYPTSISALSFSRDGQLLAVAS 302
Score = 33.9 bits (74), Expect = 0.52
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASAS 82
+ ++ ++P AT D V +WD R Y++ + ++ ++FS G+ +A AS
Sbjct: 244 VNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQLLAVAS 302
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 53.2 bits (122), Expect = 8e-07
Identities = 22/87 (25%), Positives = 47/87 (54%)
Query: 100 MFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDG 159
+ K H + + ++++ +G + + + D LW + + ++ GH V C +S D
Sbjct: 5 LMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDS 64
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYK 186
S + + S D++ KLW++ SG+ + T+K
Sbjct: 65 SRLITGSADQTAKLWDVKSGKELFTFK 91
Score = 52.8 bits (121), Expect = 1e-06
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 22/248 (8%)
Query: 54 MRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQF 113
MR +GH+ + + ++ G + S ++D T +W G ++ H+ V
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 114 SSDGSKIITASDDKVVKLW--STHKHKFISSFVGHTNWV------RCARMSNDGSI---- 161
S D S++IT S D+ KLW + K F F T V R A ++ D +
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTA 120
Query: 162 ---IASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDI 218
+ ++D + + +S +H D K W P + ++++D
Sbjct: 121 AIHVKRIAEDPEEQ--DAESVLVLHC-PDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDA 177
Query: 219 RTHNLVQYYSI---HNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGP 275
T L++ H + +T + S+ LT S D K+ D+ + T + P
Sbjct: 178 ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYT-TVVP 236
Query: 276 VNAVNFSP 283
VNAV+ SP
Sbjct: 237 VNAVSLSP 244
Score = 51.6 bits (118), Expect = 2e-06
Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 18/248 (7%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
+KGH+ +T L YN + + + D++ LW R ++GH+ AV S
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
+ + S D+T ++W FK ++ T RSV F+ + +D V + + H
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNAPT-RSVDFAVGDRLAVITTDHFVDRTAAIHV 124
Query: 137 HKFI---------SSFVGH----TNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIH 183
+ S V H + A I S +DK ++W+ ++G+ +
Sbjct: 125 KRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Query: 184 TYKDLKGHG---LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIH 240
+ GH L + + KL+D+RT L++ Y+ V V++
Sbjct: 185 QSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTT-VVPVNAVSLS 243
Query: 241 PSGSYILT 248
P +++ T
Sbjct: 244 PLLNHVCT 251
Score = 42.3 bits (95), Expect = 0.001
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 12/184 (6%)
Query: 145 GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYV 204
GH + R + +G ++ SC+ D + LW D+GE + TY+ G +
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 205 AVATSHGNVKLYDIRTHNLVQYY-------SIHNEAVTQVAIHPSGSYI-LTASKDGKMK 256
++ KL+D+++ + + S+ ++A+ + ++ TA+ K
Sbjct: 68 ITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHVKRI 127
Query: 257 ILDLLE--GHPIFTLSGHNGP--VNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESK 312
D E + L +G +N + P T S G+DK++ IW L +S
Sbjct: 128 AEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSD 187
Query: 313 ENEG 316
E G
Sbjct: 188 EEVG 191
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 52.8 bits (121), Expect = 1e-06
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 9/201 (4%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
+ KGHK+ + +L +P + + SLD SV LWDLR + + + H V +
Sbjct: 108 RYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLR--VNACQGILHLRGRPAVAYDQQ 165
Query: 75 GKYMASASRDKTVRIWVPTV--TGSTGMFKAHSQT--VRSVQFSSDG-SKIITASDDKVV 129
G A A V+++ G F T V ++FS+DG S ++T +++ +
Sbjct: 166 GLVFAIAMEGGAVKLFDSRCYDKGPFDTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIY 225
Query: 130 KLWSTHKHKFISSFVGHTNWVRC-ARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDL 188
L + K + + A + DG + S S D + WN+++ + +++
Sbjct: 226 VLDAYRGEKKCGFSLEPSQGTPIEATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENN 285
Query: 189 KGHGLHLAWHP-SGCYVAVAT 208
G L W P +VA +T
Sbjct: 286 IGVVSCLKWAPRRAMFVAAST 306
Score = 47.6 bits (108), Expect = 4e-05
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 8/183 (4%)
Query: 124 SDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIH 183
S + ++ S + ++ + F GH + V MS S S D+S +LW+L C
Sbjct: 91 STGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNAC-Q 149
Query: 184 TYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSI----HNEAVTQVAI 239
L+G +A+ G A+A G VKL+D R ++ + + V +
Sbjct: 150 GILHLRGRPA-VAYDQQGLVFAIAMEGGAVKLFDSRCYDKGPFDTFLVGGDTAEVNDIKF 208
Query: 240 HPSGSYILTASKDGKMKILDLLEGHPI--FTLSGHNGPVNAVNFSPTGDTFSSAGDDKLV 297
G +L + + + +LD G F+L G F+P G S D +
Sbjct: 209 SNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGKYVLSGSGDGTL 268
Query: 298 FIW 300
W
Sbjct: 269 HAW 271
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 52.8 bits (121), Expect = 1e-06
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 16/263 (6%)
Query: 36 IATSSLDNSVLLWDLR-GTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTV 94
I T+S D S+L D+ G ++ H++AV + + + +AS V+IW
Sbjct: 9 IVTASADCSILATDVETGAQVAHLENAHEDAV-NTLINVTETTIASGDDKGCVKIWDTRQ 67
Query: 95 TGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFIS-SFVGHTNWVRCA 153
+ F AH + + F+SD K++ S D + + + K S S +
Sbjct: 68 RSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDELLSVV 127
Query: 154 RMSNDGSIIASCSDDKSTKL---WNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSH 210
M N +I C T L W +C + DL + + + +
Sbjct: 128 IMKNGRKVI--CGTQNGTLLLYSWGFFK-DCSDRFVDLAPNSVDALLKLDEDRLITGCDN 184
Query: 211 GNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLS 270
G + L I + ++Q H+ + +A+ ++ + + D +K+ +L E L
Sbjct: 185 GIISLVGILPNRIIQPIGSHDYPIEDLALSHDKKFLGSTAHDSMLKLWNLEE-----ILE 239
Query: 271 GHNGPVNAVNFSPTGDTFSSAGD 293
G N VN+ N S + S D
Sbjct: 240 GSN--VNSGNASGAAEDSDSDND 260
Score = 43.2 bits (97), Expect = 9e-04
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA 79
H++A+ L N + IA+ V +WD R S+ F H++ + +TF+S +
Sbjct: 36 HEDAVNTLI-NVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLV 94
Query: 80 SASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
S D T+ + + + + SV +G K+I + + + L+S
Sbjct: 95 VTSGDGTLSVCNLRTSKVQSQSEFSEDELLSVVIMKNGRKVICGTQNGTLLLYS 148
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 52.8 bits (121), Expect = 1e-06
Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 13/215 (6%)
Query: 99 GMFKAHSQTVRSVQFSSDGS-KIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSN 157
G F HS+ V S F +I T +D +V + KF SS H+N+V C R S
Sbjct: 2 GDFDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSP 61
Query: 158 DGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHG---LHLAWHPSGCYVAVATSHGNVK 214
DG+ + S DK +++ +G+ + GH ++W P V ++ + K
Sbjct: 62 DGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAK 121
Query: 215 LYDIRTH----NLVQYYSIHNEAVTQ---VAIHPSGSYILTASKDGKMKILDLLE-GHPI 266
++++ ++++ S + V +++T S G M + + P
Sbjct: 122 VWEVAEDGTIGSVIKTLSFMESGGAEDMLVGCLWQNDHLITVSLGGTMSLFSADDMDKPP 181
Query: 267 FTLSGHNGPVNAVN-FSPTGDTFSSAGDDKLVFIW 300
LSGH V ++ T S D L+ W
Sbjct: 182 LLLSGHIKNVTSLAVLGENQKTILSCSYDGLIVKW 216
Score = 41.9 bits (94), Expect = 0.002
Identities = 62/298 (20%), Positives = 121/298 (40%), Gaps = 24/298 (8%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLR--GTM------RSYRFQGHDEAVMDVT 70
GHK +I A+ ++P+ +++ T S D S +W++ GT+ S+ G E ++ V
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDML-VG 152
Query: 71 FSSSGKYMASASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSSDGSK-IITASDDKV 128
++ + S T+ ++ + + H + V S+ + K I++ S D +
Sbjct: 153 CLWQNDHLITVSLGGTMSLFSADDMDKPPLLLSGHIKNVTSLAVLGENQKTILSCSYDGL 212
Query: 129 VKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDL 188
+ W + T R A + + SI S D+ ++ D+G + D+
Sbjct: 213 IVKWLKGVGYSCKLQMKDTKIKRLA--ATESSIFISGYDNMVWRIPLTDNGYGAAEHVDI 270
Query: 189 KGH---GLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSY 245
GH + +A V+ G V L + N++ + AV I P G
Sbjct: 271 -GHQPLDISIAVDSPEATALVSFDSGVVLLNGL---NILSKIDL-GFAVAASVISPDGKE 325
Query: 246 ILTASKDGKMKILDLLEGHPI---FTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ +DGK+ I + + + L H G + + +SP F+S ++ +W
Sbjct: 326 AIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFASGDANREAVVW 383
Score = 41.1 bits (92), Expect = 0.003
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLR-GTMRSYRFQGHDEAVMDVTFSSSG 75
L+ H+ A+T + Y+P+ A+ + ++WD ++ H + + +S +
Sbjct: 352 LEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNN 411
Query: 76 KYMASASRDKTVRIWVPTVTGSTGMF--KAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
K +A+ S D V ++ S+ + AH V +V F D + ++ +D V+LW
Sbjct: 412 KMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAVAFIDD-CTVASSGEDASVRLW 469
Score = 40.7 bits (91), Expect = 0.005
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 7/122 (5%)
Query: 187 DLKGHG---LHLAWHPSGCY-VAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPS 242
D GH L A+ P+ + +A V YD + H+ V + P
Sbjct: 3 DFDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPD 62
Query: 243 GSYILTASKDGKMKILDLLEGHPIFTLS---GHNGPVNAVNFSPTGDTFSSAGDDKLVFI 299
G+ +T S D K I D G + L+ GH G + AV++SP + DK +
Sbjct: 63 GTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKV 122
Query: 300 WK 301
W+
Sbjct: 123 WE 124
Score = 37.9 bits (84), Expect = 0.032
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLR-----GTMRSYRFQGHDEAVMDVTFSSS 74
H N + + Y+P+ + T S D +++D + G + S GH ++ V++S
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASE--DGHKGSIYAVSWSPD 107
Query: 75 GKYMASASRDKTVRIWVPTVTGSTG 99
K + + S DK+ ++W G+ G
Sbjct: 108 SKRVLTVSADKSAKVWEVAEDGTIG 132
Score = 33.9 bits (74), Expect = 0.52
Identities = 30/161 (18%), Positives = 64/161 (39%), Gaps = 7/161 (4%)
Query: 23 AITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR---FQGHDEAVMDVTFSSSGKYMA 79
A+ A +P+ ++ D + ++ + G + H A+ + +S A
Sbjct: 313 AVAASVISPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSPDLTMFA 372
Query: 80 SASRDKTVRIWV-PTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK-- 136
S ++ +W T H+ + S+ +S + + T S D V ++ K
Sbjct: 373 SGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPA 432
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
I++ H V +D ++ AS +D S +LW+++
Sbjct: 433 SSRITARNAHLGGVNAVAFIDDCTV-ASSGEDASVRLWHIE 472
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 52.0 bits (119), Expect = 2e-06
Identities = 68/275 (24%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
K L H+ + L ++P+D + + S+DNS ++WD+ H V V +
Sbjct: 47 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 106
Query: 75 GKYMASASRDKTVRIWV-PTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
KY+AS S D+T RI+ T S G+ K + + V +D + + K +K
Sbjct: 107 AKYVASLSSDRTCRIYANKPQTKSKGVEKM-NYVCQHVIMKADQQR---GDETKTIKTHL 162
Query: 134 THKHKFISSFVGHTNWVRCARMSNDGS-IIASCSDDKSTKLWNLDSGECIHTYKDLKGHG 192
H + + SF +W S DGS ++ K + + + + KDL
Sbjct: 163 FH-DETLPSFFRRLSW------SPDGSFLLIPAGSFKVSPTSEAVNATYVFSRKDLSRPA 215
Query: 193 LHL--AWHP----SGCYVAV-----ATSHGNVKL-----YDIRTHNLVQYY--------- 227
L L A P C VA ++ G KL + I T N V Y
Sbjct: 216 LQLPGASKPVVVVRFCPVAFKLRGSSSEEGFFKLPYRLVFAIATLNSVYIYDTECVAPIA 275
Query: 228 ---SIHNEAVTQVAIHPSGSYILTASKDGKMKILD 259
+H A+T + P+ SY+ +S+DG +++
Sbjct: 276 VLAGLHYAAITDITWSPNASYLALSSQDGYCTLVE 310
Score = 36.3 bits (80), Expect = 0.098
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Query: 161 IIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH------LAWHPSGCYVAVATSHGNVK 214
++AS +D +W L E ++K K H L W P Y+ + +
Sbjct: 19 LLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCI 78
Query: 215 LYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
++D+ ++ Q H V VA P Y+ + S D +I
Sbjct: 79 IWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRI 121
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 52.0 bits (119), Expect = 2e-06
Identities = 68/275 (24%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
K L H+ + L ++P+D + + S+DNS ++WD+ H V V +
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 165
Query: 75 GKYMASASRDKTVRIWV-PTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
KY+AS S D+T RI+ T S G+ K + + V +D + + K +K
Sbjct: 166 AKYVASLSSDRTCRIYANKPQTKSKGVEKM-NYVCQHVIMKADQQR---GDETKTIKTHL 221
Query: 134 THKHKFISSFVGHTNWVRCARMSNDGS-IIASCSDDKSTKLWNLDSGECIHTYKDLKGHG 192
H + + SF +W S DGS ++ K + + + + KDL
Sbjct: 222 FH-DETLPSFFRRLSW------SPDGSFLLIPAGSFKVSPTSEAVNATYVFSRKDLSRPA 274
Query: 193 LHL--AWHP----SGCYVAV-----ATSHGNVKL-----YDIRTHNLVQYY--------- 227
L L A P C VA ++ G KL + I T N V Y
Sbjct: 275 LQLPGASKPVVVVRFCPVAFKLRGSSSEEGFFKLPYRLVFAIATLNSVYIYDTECVAPIA 334
Query: 228 ---SIHNEAVTQVAIHPSGSYILTASKDGKMKILD 259
+H A+T + P+ SY+ +S+DG +++
Sbjct: 335 VLAGLHYAAITDITWSPNASYLALSSQDGYCTLVE 369
Score = 48.0 bits (109), Expect = 3e-05
Identities = 43/178 (24%), Positives = 67/178 (37%), Gaps = 16/178 (8%)
Query: 96 GSTGMFKAHS-QTVRSVQFSSDGSKIITASDDKVVKLWSTHKHK---------FISSFVG 145
G T H + V +V F + TA D +KLW + + + SS
Sbjct: 3 GGTIQISWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTY 62
Query: 146 HTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH------LAWHP 199
H V R S G ++AS +D +W L E ++K K H L W P
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 200 SGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
Y+ + + ++D+ ++ Q H V VA P Y+ + S D +I
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRI 180
Score = 43.6 bits (98), Expect = 6e-04
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 29 YNPNDQQIATSSLDNSVLLWDLRG-----TMRSYRFQG----HDEAVMDVTFSSSGKYMA 79
++P +AT+ D + LW + + S +Q H AV + FS SG+ +A
Sbjct: 21 FHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLA 80
Query: 80 SASRDKTVRIWV--PTVTG-STGMFKA---HSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
S + + IW P+ T S + K+ H + V +Q+S D + +I+ S D +W
Sbjct: 81 SGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWD 140
Query: 134 THKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLW 174
+K H ++V+ +AS S D++ +++
Sbjct: 141 VNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 40.3 bits (90), Expect = 0.006
Identities = 31/148 (20%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 9 PEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLR--GTMRSYR----FQGH 62
P + L H A+ + ++P+ + +A+ + + +W L T +S++ H
Sbjct: 52 PSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFH 111
Query: 63 DEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIIT 122
+ V+D+ +S Y+ S S D + IW + AH V+ V + + +
Sbjct: 112 RKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVAS 171
Query: 123 ASDDKVVKLWSTHKHKFISSFVGHTNWV 150
S D+ ++++ +K + S V N+V
Sbjct: 172 LSSDRTCRIYA-NKPQTKSKGVEKMNYV 198
Score = 36.3 bits (80), Expect = 0.098
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 234 VTQVAIHPSGSYILTASKDGKMKILDLLEGH-----PIFT----LSGHNGPVNAVNFSPT 284
V V HP + TA D +K+ + G P + L+ H VN + FSP+
Sbjct: 16 VLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPS 75
Query: 285 GDTFSSAGDDKLVFIWKTNFTDLSSESK 312
G+ +S D +FIWK + ++ + K
Sbjct: 76 GELLASGADGGELFIWKLHPSETNQSWK 103
Score = 36.3 bits (80), Expect = 0.098
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 15/155 (9%)
Query: 161 IIASCSDDKSTKLWNLDSGEC------IHTYKDLKGHGLH---LAWHPSGCYVAVATSHG 211
++A+ D KLW ++SG+ + L HG + + PSG +A G
Sbjct: 27 LLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGG 86
Query: 212 NV---KLYDIRTHNLVQYY---SIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHP 265
+ KL+ T+ + + S H + V + P +Y+++ S D I D+ +G
Sbjct: 87 ELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSV 146
Query: 266 IFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
L H V V + P +S D+ I+
Sbjct: 147 HQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 52.0 bits (119), Expect = 2e-06
Identities = 68/275 (24%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
K L H+ + L ++P+D + + S+DNS ++WD+ H V V +
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 165
Query: 75 GKYMASASRDKTVRIWV-PTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
KY+AS S D+T RI+ T S G+ K + + V +D + + K +K
Sbjct: 166 AKYVASLSSDRTCRIYANKPQTKSKGVEKM-NYVCQHVIMKADQQR---GDETKTIKTHL 221
Query: 134 THKHKFISSFVGHTNWVRCARMSNDGS-IIASCSDDKSTKLWNLDSGECIHTYKDLKGHG 192
H + + SF +W S DGS ++ K + + + + KDL
Sbjct: 222 FH-DETLPSFFRRLSW------SPDGSFLLIPAGSFKVSPTSEAVNATYVFSRKDLSRPA 274
Query: 193 LHL--AWHP----SGCYVAV-----ATSHGNVKL-----YDIRTHNLVQYY--------- 227
L L A P C VA ++ G KL + I T N V Y
Sbjct: 275 LQLPGASKPVVVVRFCPVAFKLRGSSSEEGFFKLPYRLVFAIATLNSVYIYDTECVAPIA 334
Query: 228 ---SIHNEAVTQVAIHPSGSYILTASKDGKMKILD 259
+H A+T + P+ SY+ +S+DG +++
Sbjct: 335 VLAGLHYAAITDITWSPNASYLALSSQDGYCTLVE 369
Score = 48.0 bits (109), Expect = 3e-05
Identities = 43/178 (24%), Positives = 67/178 (37%), Gaps = 16/178 (8%)
Query: 96 GSTGMFKAHS-QTVRSVQFSSDGSKIITASDDKVVKLWSTHKHK---------FISSFVG 145
G T H + V +V F + TA D +KLW + + + SS
Sbjct: 3 GGTIQISWHDGKPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTY 62
Query: 146 HTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH------LAWHP 199
H V R S G ++AS +D +W L E ++K K H L W P
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 200 SGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
Y+ + + ++D+ ++ Q H V VA P Y+ + S D +I
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRI 180
Score = 43.6 bits (98), Expect = 6e-04
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 29 YNPNDQQIATSSLDNSVLLWDLRG-----TMRSYRFQG----HDEAVMDVTFSSSGKYMA 79
++P +AT+ D + LW + + S +Q H AV + FS SG+ +A
Sbjct: 21 FHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLA 80
Query: 80 SASRDKTVRIWV--PTVTG-STGMFKA---HSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
S + + IW P+ T S + K+ H + V +Q+S D + +I+ S D +W
Sbjct: 81 SGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWD 140
Query: 134 THKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLW 174
+K H ++V+ +AS S D++ +++
Sbjct: 141 VNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 40.3 bits (90), Expect = 0.006
Identities = 31/148 (20%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 9 PEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLR--GTMRSYR----FQGH 62
P + L H A+ + ++P+ + +A+ + + +W L T +S++ H
Sbjct: 52 PSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFH 111
Query: 63 DEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIIT 122
+ V+D+ +S Y+ S S D + IW + AH V+ V + + +
Sbjct: 112 RKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVAS 171
Query: 123 ASDDKVVKLWSTHKHKFISSFVGHTNWV 150
S D+ ++++ +K + S V N+V
Sbjct: 172 LSSDRTCRIYA-NKPQTKSKGVEKMNYV 198
Score = 36.3 bits (80), Expect = 0.098
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 234 VTQVAIHPSGSYILTASKDGKMKILDLLEGH-----PIFT----LSGHNGPVNAVNFSPT 284
V V HP + TA D +K+ + G P + L+ H VN + FSP+
Sbjct: 16 VLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPS 75
Query: 285 GDTFSSAGDDKLVFIWKTNFTDLSSESK 312
G+ +S D +FIWK + ++ + K
Sbjct: 76 GELLASGADGGELFIWKLHPSETNQSWK 103
Score = 36.3 bits (80), Expect = 0.098
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 15/155 (9%)
Query: 161 IIASCSDDKSTKLWNLDSGEC------IHTYKDLKGHGLH---LAWHPSGCYVAVATSHG 211
++A+ D KLW ++SG+ + L HG + + PSG +A G
Sbjct: 27 LLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGG 86
Query: 212 NV---KLYDIRTHNLVQYY---SIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHP 265
+ KL+ T+ + + S H + V + P +Y+++ S D I D+ +G
Sbjct: 87 ELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSV 146
Query: 266 IFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
L H V V + P +S D+ I+
Sbjct: 147 HQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 52.0 bits (119), Expect = 2e-06
Identities = 65/240 (27%), Positives = 103/240 (42%), Gaps = 43/240 (17%)
Query: 60 QGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTV------RSVQF 113
+GH +AV + FSS GK +A+A D +R++ S+ FK + +V F
Sbjct: 83 KGHGDAVTGLCFSSDGKSLATACADGVIRVF-KLDDASSKSFKFLRINLPAGGHPTAVAF 141
Query: 114 SSDGSKIITA----------------SDDKVVKL------WSTHKHKFISSFVGHTNWVR 151
+ D S I+ A D+ KL W H H V +
Sbjct: 142 ADDASSIVVACHHMSGSSLYMYGEDKQKDQQGKLPLPSIKWD-HHHIHEKRSVLTISGAT 200
Query: 152 CARMSNDGSI-IASCSDDKSTKLWNLDSGECI-HT-YKDLKGHGLHLAWHPSGCYVAVAT 208
+ DGS+ IASCS+ LW+ +G + H LK H A P+G ++A A
Sbjct: 201 ATYGTADGSVVIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNH--MAAVSPNGRFLAAAA 258
Query: 209 SHGNVKLYDI--------RTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDL 260
+VK+++I + + V H AVT + P+ I+TASKDG +++ ++
Sbjct: 259 FTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNI 318
Score = 47.6 bits (108), Expect = 4e-05
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 26/145 (17%)
Query: 16 QLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLR---------GTMRSYRF----QGH 62
QLKGHK+A+T L ++PN +QI T+S D S+ +W++ T++ + G
Sbjct: 284 QLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNINVRYHLDEDPKTLKVFPIPLCDSGG 343
Query: 63 DEAVMD-VTFSSSGKYMASASRDKTVRIWVPTVTGST--GMFKAHSQTVRSVQFS----S 115
+ D ++ GK +A AS T++ W+ TG+ KAH + + ++ +
Sbjct: 344 NPLHYDRLSLCPEGKILA-ASHGSTLQ-WLCAETGNVLDTAEKAHEGDITCISWAPKAIT 401
Query: 116 DGSK----IITASDDKVVKLWSTHK 136
G + + T+ DDK VKLW K
Sbjct: 402 VGERHAMVLGTSGDDKKVKLWEAPK 426
Score = 37.5 bits (83), Expect = 0.042
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 16 QLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDL--------RGTMRSYRFQGHDEAVM 67
QLK H A++ PN + +A ++ V +W++ + R + +GH AV
Sbjct: 239 QLKNHMAAVS-----PNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVT 293
Query: 68 DVTFSSSGKYMASASRDKTVRIW 90
+ FS + + + +AS+D ++R+W
Sbjct: 294 WLCFSPNSEQIITASKDGSIRVW 316
Score = 34.7 bits (76), Expect = 0.30
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 36 IATSSLDNSVLLWDLR-----GTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW 90
IA+ S ++LW + G + + + + H AV S +G+++A+A+ V++W
Sbjct: 212 IASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAV-----SPNGRFLAAAAFTADVKVW 266
Query: 91 --VPTVTGSTG------MFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
V GS K H V + FS + +IITAS D +++W+
Sbjct: 267 EIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN 317
Score = 33.5 bits (73), Expect = 0.69
Identities = 51/239 (21%), Positives = 94/239 (39%), Gaps = 39/239 (16%)
Query: 102 KAHSQTVRSVQFSSDGSKIITASDDKVVKLW-----STHKHKFISSFV---GHTNWVRCA 153
K H V + FSSDG + TA D V++++ S+ KF+ + GH V A
Sbjct: 83 KGHGDAVTGLCFSSDGKSLATACADGVIRVFKLDDASSKSFKFLRINLPAGGHPTAVAFA 142
Query: 154 RMSNDGSIIASCSDDKSTKLWN--------------LDSGECIHTYKDLKGHGLHLAWHP 199
+ SI+ +C + L+ L S + H + K L ++
Sbjct: 143 --DDASSIVVACHHMSGSSLYMYGEDKQKDQQGKLPLPSIKWDHHHIHEKRSVLTISGAT 200
Query: 200 S------GCYVAVATSHG-NVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKD 252
+ G V + S G ++ L+ +T + + + A+ P+G ++ A+
Sbjct: 201 ATYGTADGSVVIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFT 260
Query: 253 GKMKILDLL--------EGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
+K+ +++ E + L GH V + FSP + +A D + +W N
Sbjct: 261 ADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNIN 319
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 51.6 bits (118), Expect = 2e-06
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 4/172 (2%)
Query: 114 SSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNW-VRCARMSNDGSIIASCSDDKSTK 172
SS + +++D V+ + ++K + F W V + +S DG ++A DD
Sbjct: 245 SSGALHFMASNNDCGVRDFDMERYKLVQLF--RYLWPVNHSSLSPDGKLVAVVGDDPDGL 302
Query: 173 LWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIR-THNLVQYYSIHN 231
L + +G+ I T K + AWHP+G A +++D R V +
Sbjct: 303 LVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNL 362
Query: 232 EAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSP 283
AV + G Y+ A + I D G+ G ++ ++FSP
Sbjct: 363 GAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFGEISGISFSP 414
Score = 44.4 bits (100), Expect = 4e-04
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 30 NPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRI 89
+P+ + +A D LL D +GH + + +G A+ ++DKT RI
Sbjct: 286 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 345
Query: 90 W-VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
W ++ S + K + VRS++F+SDG + A V ++ T
Sbjct: 346 WDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDT 391
Score = 43.6 bits (98), Expect = 6e-04
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTFSSSG 75
LKGH + A ++PN AT + D + +WD R S +G+ AV + F+S G
Sbjct: 315 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDG 374
Query: 76 KYMASASRDKTVRIW 90
+Y+A A V I+
Sbjct: 375 RYVAMAEPADFVHIY 389
Score = 43.2 bits (97), Expect = 9e-04
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 213 VKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGH 272
V+ +D+ + LVQ + + V ++ P G + D ++D G I TL GH
Sbjct: 260 VRDFDMERYKLVQLFR-YLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGH 318
Query: 273 NGPVNAVNFSPTGDTFSSAGDDKLVFIWKT 302
A + P G TF++ DK IW T
Sbjct: 319 LDYSFASAWHPNGVTFATGNQDKTCRIWDT 348
Score = 39.5 bits (88), Expect = 0.010
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 70 TFSSSGKYMASASRDKTVRIWVPTVTGST-GMFKAHSQTVRSVQFSSDGSKIITASDDKV 128
+ S GK +A D + V T G T G K H + + +G T + DK
Sbjct: 284 SLSPDGKLVAVVGDDPD-GLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKT 342
Query: 129 VKLWSTHK-HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSG 179
++W T K + ++ G+ VR R ++DG +A +++ SG
Sbjct: 343 CRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSG 394
Score = 38.7 bits (86), Expect = 0.018
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 108 VRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSD 167
V S DG + DD L T + I + GH ++ + +G A+ +
Sbjct: 280 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 339
Query: 168 DKSTKLWNLDS-GECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRT 220
DK+ ++W+ E + K G + + G YVA+A V +YD ++
Sbjct: 340 DKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKS 393
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 51.6 bits (118), Expect = 2e-06
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 4/172 (2%)
Query: 114 SSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNW-VRCARMSNDGSIIASCSDDKSTK 172
SS + +++D V+ + ++K + F W V + +S DG ++A DD
Sbjct: 239 SSGALHFMASNNDCGVRDFDMERYKLVQLF--RYLWPVNHSSLSPDGKLVAVVGDDPDGL 296
Query: 173 LWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIR-THNLVQYYSIHN 231
L + +G+ I T K + AWHP+G A +++D R V +
Sbjct: 297 LVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNL 356
Query: 232 EAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSP 283
AV + G Y+ A + I D G+ G ++ ++FSP
Sbjct: 357 GAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFGEISGISFSP 408
Score = 44.4 bits (100), Expect = 4e-04
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 30 NPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRI 89
+P+ + +A D LL D +GH + + +G A+ ++DKT RI
Sbjct: 280 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 339
Query: 90 W-VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
W ++ S + K + VRS++F+SDG + A V ++ T
Sbjct: 340 WDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDT 385
Score = 43.6 bits (98), Expect = 6e-04
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTFSSSG 75
LKGH + A ++PN AT + D + +WD R S +G+ AV + F+S G
Sbjct: 309 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDG 368
Query: 76 KYMASASRDKTVRIW 90
+Y+A A V I+
Sbjct: 369 RYVAMAEPADFVHIY 383
Score = 43.2 bits (97), Expect = 9e-04
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 213 VKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGH 272
V+ +D+ + LVQ + + V ++ P G + D ++D G I TL GH
Sbjct: 254 VRDFDMERYKLVQLFR-YLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGH 312
Query: 273 NGPVNAVNFSPTGDTFSSAGDDKLVFIWKT 302
A + P G TF++ DK IW T
Sbjct: 313 LDYSFASAWHPNGVTFATGNQDKTCRIWDT 342
Score = 39.5 bits (88), Expect = 0.010
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 70 TFSSSGKYMASASRDKTVRIWVPTVTGST-GMFKAHSQTVRSVQFSSDGSKIITASDDKV 128
+ S GK +A D + V T G T G K H + + +G T + DK
Sbjct: 278 SLSPDGKLVAVVGDDPD-GLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKT 336
Query: 129 VKLWSTHK-HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSG 179
++W T K + ++ G+ VR R ++DG +A +++ SG
Sbjct: 337 CRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSG 388
Score = 38.7 bits (86), Expect = 0.018
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 108 VRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSD 167
V S DG + DD L T + I + GH ++ + +G A+ +
Sbjct: 274 VNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQ 333
Query: 168 DKSTKLWNLDS-GECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRT 220
DK+ ++W+ E + K G + + G YVA+A V +YD ++
Sbjct: 334 DKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKS 387
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 51.6 bits (118), Expect = 2e-06
Identities = 44/213 (20%), Positives = 93/213 (43%), Gaps = 16/213 (7%)
Query: 16 QLKGHKNAITALYY-NPNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT--F 71
++ H + L + +PN Q + T D + +WDL G + + F+GH+ V +
Sbjct: 448 EIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDLSGK-KLFTFEGHEAPVYSICPHQ 506
Query: 72 SSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITA----SDDK 127
+ +++ S + D ++ W+ GS + A Q ++ +S+DGS++ + D
Sbjct: 507 KENIQFIFSTALDGKIKAWLYDNVGSRVDYDAPGQWCTTMLYSADGSRLFSCGTSKEGDS 566
Query: 128 VVKLWSTHKHKFISSFVG-HTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYK 186
+ W+ + +++G + + + +D K WN+D+ + T
Sbjct: 567 FLVEWNESEGALKRTYLGFRKKSAGVVQFDTTRNRFLAVGEDNQIKFWNMDNTNLL-TVV 625
Query: 187 DLKGHGL----HLAWHPSGCYVAVATSHGNVKL 215
+ +G GL L ++ G +AV T+ K+
Sbjct: 626 EAEG-GLPNLPRLRFNKDGNLLAVTTADNGFKI 657
Score = 42.7 bits (96), Expect = 0.001
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 172 KLWNLDSGECIHTYKDLKGHGL---HLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYS 228
K+WN+ + I +K + +AW P G + V+ + + +Y + +L Q+
Sbjct: 389 KIWNMAACSVIFQGSIVKEPSISVTRVAWSPDGNLLGVSFTKHLIHVYAYQGSDLRQHLE 448
Query: 229 I--HNEAVTQVAI-HPSGSY-ILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV 279
I H V +A HP+ ++T D +K+ DL G +FT GH PV ++
Sbjct: 449 IDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDL-SGKKLFTFEGHEAPVYSI 502
Score = 39.9 bits (89), Expect = 0.008
Identities = 71/333 (21%), Positives = 130/333 (39%), Gaps = 28/333 (8%)
Query: 82 SRDKTV----RIW---VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS- 133
SR+K V +IW +V + K S +V V +S DG+ + + ++ +++
Sbjct: 379 SREKVVTEPFKIWNMAACSVIFQGSIVKEPSISVTRVAWSPDGNLLGVSFTKHLIHVYAY 438
Query: 134 ----THKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLK 189
+H I + VG N + A N + +C DDK K+W+L SG+ + T++ +
Sbjct: 439 QGSDLRQHLEIDAHVGCVNDLAFAH-PNKQMCVVTCGDDKLIKVWDL-SGKKLFTFEGHE 496
Query: 190 GHGLHLAWHPSGC--YVAVATSHGNVK--LYDIRTHNLVQYYSIHNEAVTQVAIHPSGSY 245
+ H ++ G +K LYD + V Y + T + GS
Sbjct: 497 APVYSICPHQKENIQFIFSTALDGKIKAWLYD-NVGSRVDY-DAPGQWCTTMLYSADGSR 554
Query: 246 ILTA--SKDGKMKILDLLEGHPIFT---LSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ + SK+G +++ E L V F T + F + G+D + W
Sbjct: 555 LFSCGTSKEGDSFLVEWNESEGALKRTYLGFRKKSAGVVQFDTTRNRFLAVGEDNQIKFW 614
Query: 301 KTNFTDLSSESKENEGQNMITGQRHLTEEGIDTIT--ENGQIQDVNILSKKAL-DYDLRD 357
+ T+L + + G + R + + +T +NG N + L ++ R
Sbjct: 615 NMDNTNLLTVVEAEGGLPNLPRLRFNKDGNLLAVTTADNGFKILANTDGLRTLRAFEARS 674
Query: 358 ISEGSLPEDFVKDPSKLESPVVVQIQKIRNVSA 390
D S + S + I KI ++ A
Sbjct: 675 FEASKASIDMKVSTSAMASSISPAIGKIEHMDA 707
Score = 36.3 bits (80), Expect = 0.098
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Query: 195 LAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTAS-KDG 253
+A + YV A G V L+++ T ++ + A T +A HP + I+ +D
Sbjct: 837 IALSKNDSYVMSACG-GKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDS 895
Query: 254 KMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ I ++ L GH + + FS + S+G D +F W
Sbjct: 896 SIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFW 942
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 23 AITALYYNPNDQQIATSSL-DNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASA 81
A T L ++P D I + D+S+ ++++R + +GH + + + FS++ + S+
Sbjct: 874 ASTFLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSS 933
Query: 82 SRDKTVRIW 90
D + W
Sbjct: 934 GADAQLFFW 942
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 51.6 bits (118), Expect = 2e-06
Identities = 24/86 (27%), Positives = 45/86 (52%)
Query: 65 AVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS 124
A+ + FS+ G Y+A+ RD +RI+ + K++ + +S DG ++T
Sbjct: 305 AINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGG 364
Query: 125 DDKVVKLWSTHKHKFISSFVGHTNWV 150
+D +V++WS K ++ GH +WV
Sbjct: 365 EDDLVQVWSMEDRKVVAWGEGHNSWV 390
Score = 39.9 bits (89), Expect = 0.008
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 222 NLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNF 281
N V + I A+ +A G+Y+ T +DG ++I D + + + G + +
Sbjct: 294 NPVARWHIGQGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAW 353
Query: 282 SPTGDTFSSAGDDKLVFIW 300
S G + G+D LV +W
Sbjct: 354 SMDGKYLLTGGEDDLVQVW 372
Score = 39.9 bits (89), Expect = 0.008
Identities = 25/103 (24%), Positives = 46/103 (44%)
Query: 195 LAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGK 254
+A+ G Y+A G ++++D T LV + A+ A G Y+LT +D
Sbjct: 309 IAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDL 368
Query: 255 MKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLV 297
+++ + + + GHN V+ V F + +S G + V
Sbjct: 369 VQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSEGSGENV 411
Score = 37.5 bits (83), Expect = 0.042
Identities = 14/75 (18%), Positives = 36/75 (48%)
Query: 108 VRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSD 167
+ S+ FS+DG+ + T D ++++ K + + + C S DG + + +
Sbjct: 306 INSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGE 365
Query: 168 DKSTKLWNLDSGECI 182
D ++W+++ + +
Sbjct: 366 DDLVQVWSMEDRKVV 380
Score = 34.3 bits (75), Expect = 0.39
Identities = 20/83 (24%), Positives = 38/83 (45%)
Query: 156 SNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKL 215
SNDG+ +A+ D ++++ + + + K G L AW G Y+ V++
Sbjct: 312 SNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQV 371
Query: 216 YDIRTHNLVQYYSIHNEAVTQVA 238
+ + +V + HN V+ VA
Sbjct: 372 WSMEDRKVVAWGEGHNSWVSGVA 394
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 50.8 bits (116), Expect = 4e-06
Identities = 63/324 (19%), Positives = 135/324 (41%), Gaps = 44/324 (13%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMD---VTF 71
++++ H+ AI A+ ++P+ + +A++ D + +W + + R + HD +D + F
Sbjct: 245 QEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSV---VEDERCEEHDVPKIDPSCIYF 301
Query: 72 SSS----------------GKYMASASRDKTVRIWVP-----TVTGSTGMFKAHSQTVRS 110
S G M+ ++ + +P + F HS +
Sbjct: 302 EVSKLSELRPVAVEKDGITGSLMSPRKTTESACVIIPPKIFRVLDKPLHEFLGHSGDILD 361
Query: 111 VQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSN-DGSIIASCSDDK 169
+ +S + +++++AS D V+LW + F H N+V + + D S S D
Sbjct: 362 ISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIF-SHNNYVTSVQFNPVDDDHFISGSIDG 419
Query: 170 STKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTH--NLVQYY 227
++W+ + + + D +G + + P G V + T + + Y++ H L +
Sbjct: 420 KVRIWSASQCQVVD-WADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNVSGHCLQLDGHI 478
Query: 228 SIHNEAVT--------QVAIH---PSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPV 276
+HN+ + Q + S ++ AS D +++I+ + S + G
Sbjct: 479 CLHNKKKSSNKRIIGFQFLLQFDSTDPSRVMVASADSQVRIISGRNVVHKYKGSRNAGNQ 538
Query: 277 NAVNFSPTGDTFSSAGDDKLVFIW 300
+ +F+ G SA DD V++W
Sbjct: 539 ISASFTADGKHIVSACDDSSVYVW 562
Score = 50.8 bits (116), Expect = 4e-06
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 22/224 (9%)
Query: 57 YRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSS- 115
+ F GH ++D+++S + + + SAS D +VR+W G+F +H+ V SVQF+
Sbjct: 350 HEFLGHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCLGIF-SHNNYVTSVQFNPV 407
Query: 116 DGSKIITASDDKVVKLWSTHKHKFI--SSFVGHTNWVRCARMSNDGSIIASCSDD----- 168
D I+ S D V++WS + + + + G V C + II + + D
Sbjct: 408 DDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAV-CYQPDGQAVIIGTLTSDCRFYN 466
Query: 169 KSTKLWNLDSGECIH-----TYKDLKGHGLHLAWHPSG-CYVAVATSHGNVKLYDIRTHN 222
S LD C+H + K + G L + + V VA++ V++ I N
Sbjct: 467 VSGHCLQLDGHICLHNKKKSSNKRIIGFQFLLQFDSTDPSRVMVASADSQVRI--ISGRN 524
Query: 223 LVQYYSIHNEAVTQV--AIHPSGSYILTASKDGKMKILDLLEGH 264
+V Y A Q+ + G +I++A D + + + + GH
Sbjct: 525 VVHKYKGSRNAGNQISASFTADGKHIVSACDDSSVYVWNCV-GH 567
Score = 44.8 bits (101), Expect = 3e-04
Identities = 51/247 (20%), Positives = 95/247 (38%), Gaps = 29/247 (11%)
Query: 49 DLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW------------VPTVTG 96
+L + Q H+ A++ + FS G+Y+ASA D +R+W VP +
Sbjct: 237 ELSALFKGQEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERCEEHDVPKIDP 296
Query: 97 STGMFKAHS-QTVRSVQFSSDGSKIITASDDKVV---------KLWSTHKHKFISSFVGH 146
S F+ +R V DG S K K++ K + F+GH
Sbjct: 297 SCIYFEVSKLSELRPVAVEKDGITGSLMSPRKTTESACVIIPPKIFRV-LDKPLHEFLGH 355
Query: 147 TNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHP-SGCYVA 205
+ + S + ++ S S D S +LW + +C+ + + + ++P +
Sbjct: 356 SGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCLGIFSH-NNYVTSVQFNPVDDDHFI 413
Query: 206 VATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHP 265
+ G V+++ +V + VT V P G ++ + + + + GH
Sbjct: 414 SGSIDGKVRIWSASQCQVVDWADARG-IVTAVCYQPDGQAVIIGTLTSDCRFYN-VSGH- 470
Query: 266 IFTLSGH 272
L GH
Sbjct: 471 CLQLDGH 477
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 50.8 bits (116), Expect = 4e-06
Identities = 45/208 (21%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 33 DQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTF----SSSGKYMASASRDKTVR 88
D+ +A DNS+ +WD++ + ++ Q + ++ S S +AS + +
Sbjct: 147 DKLLAIGCSDNSLSIWDVKESRMAFEIQSPERCLLYTMRLWGDSISTLRIASGTIFNEII 206
Query: 89 IWVPT-VTGST---GMFKA--------HSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
+W + G G + A H ++ + +S DGSKI++ SDD+ ++W
Sbjct: 207 VWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDS 266
Query: 137 HKFISSFV-GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGL-H 194
+ + + GH+ VR S+I + +D + ++W +D G + K+ G G+
Sbjct: 267 QEVVGPVLFGHS--VRVWDCCISDSLIVTAGEDCTCRVWGVD-GTQLEVIKEHIGRGIWR 323
Query: 195 LAWHPSGCYVAVATSHGNVKLYDIRTHN 222
+ P+ + A +K++ + HN
Sbjct: 324 CLYDPNSSLLVTAGFDSAIKVHQL--HN 349
Score = 42.7 bits (96), Expect = 0.001
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 26/190 (13%)
Query: 2 MEDKVTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRG--------- 52
M ++ +PE CL ++ ++I+ L +IA+ ++ N +++W G
Sbjct: 169 MAFEIQSPERCLLYTMRLWGDSISTL-------RIASGTIFNEIIVWRAVGLDGDNVDHG 221
Query: 53 ---TMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTG-MFKAHSQTV 108
R GH+ ++ + +S G + S S D++ RIW G + HS V
Sbjct: 222 HYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHS--V 279
Query: 109 RSVQFSSDGSKIITASDDKVVKLWSTH--KHKFISSFVGHTNWVRCARMSNDGSIIASCS 166
R S I+TA +D ++W + + I +G W RC N S++ +
Sbjct: 280 RVWDCCISDSLIVTAGEDCTCRVWGVDGTQLEVIKEHIGRGIW-RCLYDPN-SSLLVTAG 337
Query: 167 DDKSTKLWNL 176
D + K+ L
Sbjct: 338 FDSAIKVHQL 347
Score = 38.7 bits (86), Expect = 0.018
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 145 GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWH--PSGC 202
GH + S DGS I S SDD+S ++W +DS E + L GH + + W S
Sbjct: 233 GHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPV--LFGHSVRV-WDCCISDS 289
Query: 203 YVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDL 260
+ A +++ + L + + P+ S ++TA D +K+ L
Sbjct: 290 LIVTAGEDCTCRVWGVDGTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIKVHQL 347
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 50.8 bits (116), Expect = 4e-06
Identities = 45/208 (21%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 33 DQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTF----SSSGKYMASASRDKTVR 88
D+ +A DNS+ +WD++ + ++ Q + ++ S S +AS + +
Sbjct: 147 DKLLAIGCSDNSLSIWDVKESRMAFEIQSPERCLLYTMRLWGDSISTLRIASGTIFNEII 206
Query: 89 IWVPT-VTGST---GMFKA--------HSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
+W + G G + A H ++ + +S DGSKI++ SDD+ ++W
Sbjct: 207 VWRAVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDS 266
Query: 137 HKFISSFV-GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGL-H 194
+ + + GH+ VR S+I + +D + ++W +D G + K+ G G+
Sbjct: 267 QEVVGPVLFGHS--VRVWDCCISDSLIVTAGEDCTCRVWGVD-GTQLEVIKEHIGRGIWR 323
Query: 195 LAWHPSGCYVAVATSHGNVKLYDIRTHN 222
+ P+ + A +K++ + HN
Sbjct: 324 CLYDPNSSLLVTAGFDSAIKVHQL--HN 349
Score = 42.7 bits (96), Expect = 0.001
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 26/190 (13%)
Query: 2 MEDKVTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRG--------- 52
M ++ +PE CL ++ ++I+ L +IA+ ++ N +++W G
Sbjct: 169 MAFEIQSPERCLLYTMRLWGDSISTL-------RIASGTIFNEIIVWRAVGLDGDNVDHG 221
Query: 53 ---TMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTG-MFKAHSQTV 108
R GH+ ++ + +S G + S S D++ RIW G + HS V
Sbjct: 222 HYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHS--V 279
Query: 109 RSVQFSSDGSKIITASDDKVVKLWSTH--KHKFISSFVGHTNWVRCARMSNDGSIIASCS 166
R S I+TA +D ++W + + I +G W RC N S++ +
Sbjct: 280 RVWDCCISDSLIVTAGEDCTCRVWGVDGTQLEVIKEHIGRGIW-RCLYDPN-SSLLVTAG 337
Query: 167 DDKSTKLWNL 176
D + K+ L
Sbjct: 338 FDSAIKVHQL 347
Score = 38.7 bits (86), Expect = 0.018
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 145 GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWH--PSGC 202
GH + S DGS I S SDD+S ++W +DS E + L GH + + W S
Sbjct: 233 GHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPV--LFGHSVRV-WDCCISDS 289
Query: 203 YVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDL 260
+ A +++ + L + + P+ S ++TA D +K+ L
Sbjct: 290 LIVTAGEDCTCRVWGVDGTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIKVHQL 347
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 50.8 bits (116), Expect = 4e-06
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Query: 22 NAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRS-----YRF--QGHDEAVMDVTFSSS 74
+ + +L ++P+++ IA + + + ++D M Y + + V ++S
Sbjct: 717 SVVCSLSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSY 776
Query: 75 GK-YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFS-SDGSKIITASDDKVVKLW 132
K Y+AS D V+IW + H + SV FS SD +K ++ SDD VKLW
Sbjct: 777 IKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLW 836
Query: 133 STHKHKFISSFVGHTNWVRCARMSN-DGSIIASCSDDKSTKLWNL 176
S ++ + + + N V C + S+ ++A S D ++L
Sbjct: 837 SINEKRSLGTIWSPAN-VCCVQFSSYSNHLLAFGSADYKVYCYDL 880
Score = 46.4 bits (105), Expect = 9e-05
Identities = 47/163 (28%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 36 IATSSLDNSVLLWDLRGTMRSY-RFQGHDEAVMDVTFSSSGKY-MASASRDKTVRIWVPT 93
+A++ D V +WD GT + + ++ H + V FS S S S D +V++W
Sbjct: 781 LASTDYDGVVQIWDA-GTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSIN 839
Query: 94 VTGSTGMFKAHSQTVRSVQFSSDGSKIIT--ASDDKVVKLWSTHKHKFISSFVGHTNWVR 151
S G + + V VQFSS + ++ ++D KV + + GH V
Sbjct: 840 EKRSLGTIWSPAN-VCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVS 898
Query: 152 CARMSNDGSIIASCSDDKSTKLWNLDS--------GECIHTYK 186
+ D I S S D S KLWNL+ G C TYK
Sbjct: 899 YVKFM-DSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYK 940
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 244 SYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDT-FSSAGDDKLVFIWKT 302
+Y+ + DG ++I D G + H +V+FSP+ T F S DD V +W
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSI 838
Query: 303 N 303
N
Sbjct: 839 N 839
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 50.8 bits (116), Expect = 4e-06
Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 104 HSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKH---KFISSFVGHTN--WVRCARMSND 158
H V VQ G +I TAS D +K+ + + +++ GH W
Sbjct: 10 HEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVAWAHPKY 69
Query: 159 GSIIASCSDDKSTKLW---NLDSGECIHTYKDLKGHGLHLAW--HPSGCYVAVATSHGNV 213
GSI+ASCS D LW N + H + D K +AW H G +A +S GN+
Sbjct: 70 GSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGSSDGNI 129
Query: 214 KLYDIR 219
++ R
Sbjct: 130 SVFTAR 135
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 50.8 bits (116), Expect = 4e-06
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 15 KQLKGHKNAITALYYNPNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEA------VM 67
K KGH +T ++P ++ + TSS D S+ +WD+ + + A V
Sbjct: 272 KNTKGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVT 331
Query: 68 DVTFSSSGKYMASASRDKTVRIWV--PTVTGSTGMF--KAHSQTVRSVQFSSDGSKIITA 123
+ GK +A D +++IW P ++ KAH+ + SV+FSSDG +++
Sbjct: 332 TCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSR 391
Query: 124 SDDKVVKLWSTHKHK-FISSFVGHTNW 149
S D +K+W + K + F G N+
Sbjct: 392 SFDGSLKVWDLRQMKEALKVFEGLPNY 418
Score = 42.7 bits (96), Expect = 0.001
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 21/194 (10%)
Query: 80 SASRDKTVRIW-VPTVTGSTGMFKAHSQT-----VRSVQFSSDGSKIITASDDKVVKLWS 133
++S D ++RIW V T + K V + + DG +I D +++WS
Sbjct: 296 TSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWS 355
Query: 134 THKH--KFISSFVG--HTNWVRCARMSNDGSIIASCSDDKSTKLWNL-DSGECIHTYKDL 188
+VG HT+ + + S+DG I+ S S D S K+W+L E + ++ L
Sbjct: 356 LKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGL 415
Query: 189 KGH--GLHLAWHPSGCYVAVATS-------HGNVKLYDIRTHNLVQYYSIH-NEAVTQVA 238
+ ++A+ P + TS G + YD +VQ I +V Q A
Sbjct: 416 PNYYPQTNVAFSPDEQIILTGTSVEKDSTTGGLLCFYDRTKLEIVQKVGISPTSSVVQCA 475
Query: 239 IHPSGSYILTASKD 252
HP + I S D
Sbjct: 476 WHPRLNQIFATSGD 489
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 50.0 bits (114), Expect = 7e-06
Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 13/152 (8%)
Query: 104 HSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK---HKFISSFVGHTN--WVRCARMSND 158
HS T+ V G ++ TAS D +K+ + +++ GH W
Sbjct: 10 HSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWAHPKF 69
Query: 159 GSIIASCSDDKSTKLW---NLDSGECIHTYKDLKGHGLHLAW--HPSGCYVAVATSHGNV 213
GS++ASCS D LW N + H + D K +AW H G +A S GN+
Sbjct: 70 GSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSLACGASDGNI 129
Query: 214 KLYDIRTH---NLVQYYSIHNEAVTQVAIHPS 242
++ R + + H VT V+ P+
Sbjct: 130 SVFSARADGGWDTTKIDQAHPVGVTSVSWAPA 161
Score = 34.7 bits (76), Expect = 0.30
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 230 HNEAVTQVAIHPSGSYILTASKDGKMKILDLLE---GHPIFTLSGHNGPVNAVNFS--PT 284
H++ + V + G + TAS D +KI + + TL+GH GPV V ++
Sbjct: 10 HSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWAHPKF 69
Query: 285 GDTFSSAGDDKLVFIWK 301
G +S D + +WK
Sbjct: 70 GSLLASCSYDGQIILWK 86
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 50.0 bits (114), Expect = 7e-06
Identities = 45/219 (20%), Positives = 84/219 (38%), Gaps = 22/219 (10%)
Query: 60 QGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK 119
Q H+ AV + FS Y+AS D+ + +W M + + S G++
Sbjct: 401 QAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGSLTPIHPSLCDSSGNE 460
Query: 120 IITASDDKVVKLWSTHKHKFISSFV------------------GHTNWVRCARMSNDGSI 161
I K K S +H I +V GH + + S +
Sbjct: 461 ITVVEKKKKGKGSSGRRHNHIPDYVHVPETVFSFSDKPVCSLKGHLDAILDLSWSK-SQL 519
Query: 162 IASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHP-SGCYVAVATSHGNVKLYDIRT 220
+ S S DK+ +LW++++ C+ + + + + P Y + ++++ I+
Sbjct: 520 LLSSSMDKTVRLWDIETKTCLKLFAH-NDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQD 578
Query: 221 HNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILD 259
++V++ +H E VT P G L S G + D
Sbjct: 579 RHVVEWSDLH-EMVTAACYTPDGQGALIGSHKGICRAYD 616
Score = 47.2 bits (107), Expect = 5e-05
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 20/214 (9%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSS-SG 75
LKGH +AI L ++ + Q + +SS+D +V LWD+ T + H++ V + FS
Sbjct: 502 LKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDIE-TKTCLKLFAHNDYVTCIQFSPVDE 559
Query: 76 KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTH 135
Y S S D +RIW H + V + ++ DG + S + + + T
Sbjct: 560 NYFLSGSLDAKIRIWSIQDRHVVEWSDLH-EMVTAACYTPDGQGALIGSHKGICRAYDTE 618
Query: 136 KHKF--ISSFVGHTNWVRCARMS---------NDGSIIASCSDDKSTKLWNLDSGECIHT 184
K + +N A+ N ++ + +D +++ LD E IH
Sbjct: 619 DCKLSQTNQIDVQSNKKSQAKRKITSFQFSPVNPSEVLVTSAD---SRIRILDGSEVIHK 675
Query: 185 YKDLKG--HGLHLAWHPSGCYVAVATSHGNVKLY 216
+K + L ++ G Y+ A+ V L+
Sbjct: 676 FKGFRNTCSQLSASYSQDGKYIICASEDSQVYLW 709
Score = 30.3 bits (65), Expect = 6.4
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 230 HNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFS 289
H +A+ ++ S +L++S D +++ D+ E L HN V + FSP + +
Sbjct: 505 HLDAILDLSWSKS-QLLLSSSMDKTVRLWDI-ETKTCLKLFAHNDYVTCIQFSPVDENYF 562
Query: 290 SAGD-DKLVFIW 300
+G D + IW
Sbjct: 563 LSGSLDAKIRIW 574
Score = 30.3 bits (65), Expect = 6.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 110 SVQFSSDGSKIITASDDKVVKLWSTHKHK 138
S +S DG II AS+D V LW H+
Sbjct: 687 SASYSQDGKYIICASEDSQVYLWKNDFHR 715
Score = 29.9 bits (64), Expect = 8.5
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 264 HPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSS 309
H + H G V + FS +S G D+++ +W+ +L S
Sbjct: 395 HMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMS 440
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 49.6 bits (113), Expect = 1e-05
Identities = 45/213 (21%), Positives = 95/213 (44%), Gaps = 16/213 (7%)
Query: 16 QLKGHKNAITALYY-NPNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT--F 71
++ H A+ L + NPN Q + T D + +WD+ G + + F+GHD V + +
Sbjct: 447 EIDAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGR-KHFTFEGHDAPVYSICPHY 505
Query: 72 SSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKII---TASD-DK 127
+ +++ S + D ++ W+ GS + A + + +S+DG+++ T+ D D
Sbjct: 506 KENIQFIFSTAIDGKIKAWLYDNLGSRVDYDAPGKWCTRMLYSADGTRLFSCGTSKDGDS 565
Query: 128 VVKLWSTHKHKFISSFVG-HTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYK 186
+ W+ + ++ + + + +D K W++++ + T
Sbjct: 566 FLVEWNESEGSIKRTYKEFQKKLAGVVQFDTSKNHFLAVGEDGQIKFWDMNNINVL-TST 624
Query: 187 DLKGHGL----HLAWHPSGCYVAVATSHGNVKL 215
D +G GL HL ++ G +AV T+ K+
Sbjct: 625 DAEG-GLPALPHLRFNKDGNLLAVTTADNGFKI 656
Score = 40.7 bits (91), Expect = 0.005
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 172 KLWNLDSGECIHTYKDLKGHGL-----HLAWHPSGCYVAVATSHGNVKLYDIRTHN-LVQ 225
K+W D C H ++ L +AW P G ++ VA + ++LY N L Q
Sbjct: 387 KIW--DMSNCSHQFQALIAKETPISVTRVAWSPDGNFIGVAFTKHLIQLYAFSGPNDLRQ 444
Query: 226 YYSI--HNEAVTQVAI-HPSGSY-ILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAV 279
+ I H AV +A +P+ ++T D +K+ D + G FT GH+ PV ++
Sbjct: 445 HTEIDAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWD-VSGRKHFTFEGHDAPVYSI 501
Score = 36.7 bits (81), Expect = 0.074
Identities = 32/142 (22%), Positives = 56/142 (39%), Gaps = 11/142 (7%)
Query: 47 LWDLRGTMRSYRFQGHDEAVMDVT---FSSSGKYMASASRDKTVRIWV---PTVTGSTGM 100
+WD+ ++ E + VT +S G ++ A ++++ P
Sbjct: 388 IWDMSNCSHQFQALIAKETPISVTRVAWSPDGNFIGVAFTKHLIQLYAFSGPNDLRQHTE 447
Query: 101 FKAHSQTVRSVQFSSDGSK--IITASDDKVVKLWSTHKHKFISSFVGHTNWVR--CARMS 156
AH V + F++ + +IT DDK++K+W K +F GH V C
Sbjct: 448 IDAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRKHF-TFEGHDAPVYSICPHYK 506
Query: 157 NDGSIIASCSDDKSTKLWNLDS 178
+ I S + D K W D+
Sbjct: 507 ENIQFIFSTAIDGKIKAWLYDN 528
Score = 33.5 bits (73), Expect = 0.69
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Query: 195 LAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTAS-KDG 253
+A + YV A G V L+++ T ++ + A T +A HP + ++ +D
Sbjct: 826 IALSKNDSYVMSAAG-GKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNVIAIGMEDS 884
Query: 254 KMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ I ++ L GH + + FS + S+G D + W
Sbjct: 885 TIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFW 931
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/69 (20%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 23 AITALYYNPNDQQIATSSLDNSVL-LWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASA 81
A T L ++P D + +++S + ++++R + +GH + + + FS++ + S+
Sbjct: 863 ASTFLAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSS 922
Query: 82 SRDKTVRIW 90
D + W
Sbjct: 923 GADAQICFW 931
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 49.6 bits (113), Expect = 1e-05
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Query: 45 VLLWDLRGTMRSYRFQG-HDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKA 103
VL D+ +R H V V+ S+ + S D V P FKA
Sbjct: 97 VLALDVASGQLKWRISDCHPGGVNAVSSSAKASCIYSGGADGMVCQIDPHSGNLIRKFKA 156
Query: 104 HSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGS-II 162
++TV S+ S DG ++TAS +K ++ K I F GH VRC + DG ++
Sbjct: 157 STKTVSSLCVSPDGKILVTASTQ--LKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKYVL 214
Query: 163 ASCSDDKSTKLWNLDSGE 180
+S ++ +W D +
Sbjct: 215 SSAVGERYIAVWKTDGAK 232
Score = 44.8 bits (101), Expect = 3e-04
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 211 GNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLS 270
G V D + NL++ + + V+ + + P G ++TAS ++K + + I +
Sbjct: 138 GMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDGKILVTAST--QLKTFNCSDLKKIQKFT 195
Query: 271 GHNGPVNAVNFSPTGD-TFSSAGDDKLVFIWKTNFTDLSSES 311
GH G V V F+ G SSA ++ + +WKT+ S S
Sbjct: 196 GHPGVVRCVAFTEDGKYVLSSAVGERYIAVWKTDGAKKQSAS 237
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 49.2 bits (112), Expect = 1e-05
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 59 FQGHDEAVMDVTFS-SSGKYMASASRDKTVRIWVPTVTGS---TGMFKAHSQTVRSVQFS 114
+ GH++ V DV FS +S + S D + +W TG+ T + KAH + V ++
Sbjct: 288 YHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILW-DARTGTNPVTKVEKAHDADLHCVDWN 346
Query: 115 -SDGSKIITASDDKVVKLWSTHK------HKFISSFVGHTNWVRCARMSND-GSIIASCS 166
D + I+T S D V+L+ K I F GH V C + S D S+ S +
Sbjct: 347 PHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSA 406
Query: 167 DDKSTKLWNLD 177
+D +W+ D
Sbjct: 407 EDGLLNIWDYD 417
Score = 41.1 bits (92), Expect = 0.003
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 4 DKVTTPEPCLKKQLKGHKNAITALYYNPNDQQ-IATSSLDNSVLLWDLRGTMRS------ 56
D T P K + K H + + +NP+D I T S DN+V L+D R +
Sbjct: 321 DARTGTNPVTKVE-KAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPI 379
Query: 57 YRFQGHDEAVMDVTFS-SSGKYMASASRDKTVRIW 90
Y+F+GH AV+ V +S S++ D + IW
Sbjct: 380 YKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIW 414
Score = 36.3 bits (80), Expect = 0.098
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 215 LYDIRT--HNLVQYYSIHNEAVTQVAIHP-SGSYILTASKDGKMKILDLLE------GHP 265
L+D RT + + + H+ + V +P + ILT S D +++ D + G P
Sbjct: 319 LWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSP 378
Query: 266 IFTLSGHNGPVNAVNFSP-TGDTFSSAGDDKLVFIW 300
I+ GH V V +SP F S+ +D L+ IW
Sbjct: 379 IYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIW 414
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 49.2 bits (112), Expect = 1e-05
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 80 SASRDKTVRIWVPTVTGSTGM-FKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHK 138
+A+ D W +G M FK HS + +V S S+I+T S+D ++W K
Sbjct: 176 TAAGDSCAYCW-DVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGK 234
Query: 139 FISSFVGH--TNWVRCARMSNDGS-IIASCSDDKSTKLWNLDSGECIHT 184
+ + +R + M+ DGS C K+ LWNL + EC+ T
Sbjct: 235 CVKVIGSQDKKSRLRVSSMALDGSESWLVCGQGKNLALWNLPASECVQT 283
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/75 (20%), Positives = 35/75 (46%)
Query: 108 VRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSD 167
+ ++ + TA+ D W K +F GH++++ + S I + S+
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 168 DKSTKLWNLDSGECI 182
D + ++W+ +G+C+
Sbjct: 222 DGTARIWDCKTGKCV 236
Score = 41.1 bits (92), Expect = 0.003
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASR 83
I A+ +P + T++ D+ WD+ F+GH + + V SS + + S
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 84 DKTVRIW 90
D T RIW
Sbjct: 222 DGTARIW 228
Score = 30.3 bits (65), Expect = 6.4
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 237 VAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGD--TFSSAGDD 294
+A H S + ++ G K D++ P + H GP V F + S GDD
Sbjct: 54 LAFHSLNSLVSQSASFGYSKGQDVMVAEPERVVRAHEGPAYDVKFYGEDEDALLLSCGDD 113
Query: 295 KLVFIWK-TNF--TDLSSESKEN 314
V WK F +D+S KEN
Sbjct: 114 GRVRGWKWREFAESDVSLHLKEN 136
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 49.2 bits (112), Expect = 1e-05
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 237 VAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVN-----AVNFSPTGDTFSSA 291
+++HPS + A ++I DL+E P+ + +GP+ A+ +S +G F SA
Sbjct: 23 ISVHPSQKSVAVAV-GSDLRIFDLIENCPVSLVDESDGPIRKESIRAIRYSTSGKLFVSA 81
Query: 292 GDDKLVFIWKTN 303
GDDKLV IW +
Sbjct: 82 GDDKLVKIWSAD 93
Score = 42.7 bits (96), Expect = 0.001
Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 29/193 (15%)
Query: 106 QTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASC 165
+++R++++S+ G ++A DDK+VK+WS + +++ V +S+D S + C
Sbjct: 64 ESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKR-VSAVAISSDDSHV--C 120
Query: 166 SDDKSTKLW-----NLDSGECIHTYKD--LKGHG----LHLAWHPSGCYVAVATSHGNVK 214
DK +W ++ G+ + + K L H L + P G Y+ A ++
Sbjct: 121 YADKFGVVWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIR 180
Query: 215 LYDI------RTHNLVQYYSIHNEAVTQVAI----HPSGSYILTASKDGKMKILDLLEGH 264
+ H + + H+E +T A + Y+++ S D +++ D+ G
Sbjct: 181 VTVFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWDITSGS 240
Query: 265 -----PIFTLSGH 272
+ T++GH
Sbjct: 241 LLDTCEVSTVAGH 253
Score = 33.1 bits (72), Expect = 0.91
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 64 EAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITA 123
E++ + +S+SGK SA DK V+IW + V +V SSD S + A
Sbjct: 64 ESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTV-CSEKRVSAVAISSDDSHVCYA 122
Query: 124 SDDKVVKLW 132
DK +W
Sbjct: 123 --DKFGVVW 129
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 48.8 bits (111), Expect = 2e-05
Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 14/259 (5%)
Query: 12 CLKKQLKGHKNAITALYYNPNDQQIATSSL---DNSVLLWDLRGTMRSYRFQGHDEAVMD 68
CLK + K + + + + + SS D+S+ L L F+GH + V+
Sbjct: 67 CLKT-INSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVS 125
Query: 69 VTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKV 128
++ S G+ S S D+TV +W V G+ + R D I +
Sbjct: 126 LSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQG---RPAAAYDDQGLIFAIAFGGY 182
Query: 129 VKLWSTHKHK----FISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHT 184
++++ ++ I S G + + SNDG ++ + D + + G + T
Sbjct: 183 IRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLST 242
Query: 185 Y--KDLKGHG-LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHP 241
+ K + G L A+ P G +V + G+ + +R+ V + + P
Sbjct: 243 FSVKPVAGESTLDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGP 302
Query: 242 SGSYILTASKDGKMKILDL 260
+T S + I DL
Sbjct: 303 GSPMFVTGSSELAFVIPDL 321
Score = 41.1 bits (92), Expect = 0.003
Identities = 56/286 (19%), Positives = 102/286 (35%), Gaps = 14/286 (4%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASR 83
I+++ ++ + T+S D+S+ L+D+ V V F+S + +SR
Sbjct: 36 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSR 95
Query: 84 ---DKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFI 140
D ++R+ FK H V S+ S G I+ S D+ V LW K
Sbjct: 96 NGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQ 155
Query: 141 SSFVGHTNWVRCARMSNDGSIIASCSDDK----STKLWNLDSGECIHTYKDLKGHGLHLA 196
A + G I A +++ E DL + +
Sbjct: 156 GLL--RVQGRPAAAYDDQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANV-VK 212
Query: 197 WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIH---NEAVTQVAIHPSGSYILTASKDG 253
+ G + + T G + + D L+ +S+ E+ A P G ++++ S DG
Sbjct: 213 FSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSGDG 272
Query: 254 KMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFI 299
+ G + + G + + P G G +L F+
Sbjct: 273 STHAWGVRSGKQVHSWMGLGSEPPVIKWGP-GSPMFVTGSSELAFV 317
Score = 36.7 bits (81), Expect = 0.074
Identities = 20/107 (18%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 197 WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDG--- 253
+H + + A+ +++LYD+ + ++ + V V + ++ +S++G
Sbjct: 41 FHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDD 100
Query: 254 KMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+++L L + + GH+ V +++ G+ F S D+ V +W
Sbjct: 101 SLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLW 147
Score = 30.3 bits (65), Expect = 6.4
Identities = 39/194 (20%), Positives = 78/194 (40%), Gaps = 12/194 (6%)
Query: 100 MFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARM-SND 158
+F+ ++ + S+ F + ++TASDD ++L+ + + V S+
Sbjct: 28 VFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHP 87
Query: 159 GSIIASCSD--DKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSG-CYVAVATSHGNVKL 215
++I S + D S +L +L + + +K + L+ G C+++ + V L
Sbjct: 88 TTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDR-TVLL 146
Query: 216 YDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILD--LLEGHP--IFTLSG 271
+D R + A + I + G +++ D + E P IF++ G
Sbjct: 147 WDQRVEKCQGLLRVQGR---PAAAYDDQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGG 203
Query: 272 HNGPVNAVNFSPTG 285
N V FS G
Sbjct: 204 DLSEANVVKFSNDG 217
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 48.8 bits (111), Expect = 2e-05
Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 14/259 (5%)
Query: 12 CLKKQLKGHKNAITALYYNPNDQQIATSSL---DNSVLLWDLRGTMRSYRFQGHDEAVMD 68
CLK + K + + + + + SS D+S+ L L F+GH + V+
Sbjct: 64 CLKT-INSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVS 122
Query: 69 VTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKV 128
++ S G+ S S D+TV +W V G+ + R D I +
Sbjct: 123 LSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQG---RPAAAYDDQGLIFAIAFGGY 179
Query: 129 VKLWSTHKHK----FISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHT 184
++++ ++ I S G + + SNDG ++ + D + + G + T
Sbjct: 180 IRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLST 239
Query: 185 Y--KDLKGHG-LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHP 241
+ K + G L A+ P G +V + G+ + +R+ V + + P
Sbjct: 240 FSVKPVAGESTLDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGP 299
Query: 242 SGSYILTASKDGKMKILDL 260
+T S + I DL
Sbjct: 300 GSPMFVTGSSELAFVIPDL 318
Score = 41.1 bits (92), Expect = 0.003
Identities = 56/286 (19%), Positives = 102/286 (35%), Gaps = 14/286 (4%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASR 83
I+++ ++ + T+S D+S+ L+D+ V V F+S + +SR
Sbjct: 33 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSR 92
Query: 84 ---DKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFI 140
D ++R+ FK H V S+ S G I+ S D+ V LW K
Sbjct: 93 NGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQ 152
Query: 141 SSFVGHTNWVRCARMSNDGSIIASCSDDK----STKLWNLDSGECIHTYKDLKGHGLHLA 196
A + G I A +++ E DL + +
Sbjct: 153 GLL--RVQGRPAAAYDDQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANV-VK 209
Query: 197 WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIH---NEAVTQVAIHPSGSYILTASKDG 253
+ G + + T G + + D L+ +S+ E+ A P G ++++ S DG
Sbjct: 210 FSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSGDG 269
Query: 254 KMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFI 299
+ G + + G + + P G G +L F+
Sbjct: 270 STHAWGVRSGKQVHSWMGLGSEPPVIKWGP-GSPMFVTGSSELAFV 314
Score = 36.7 bits (81), Expect = 0.074
Identities = 20/107 (18%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 197 WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDG--- 253
+H + + A+ +++LYD+ + ++ + V V + ++ +S++G
Sbjct: 38 FHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDD 97
Query: 254 KMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+++L L + + GH+ V +++ G+ F S D+ V +W
Sbjct: 98 SLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLW 144
Score = 30.3 bits (65), Expect = 6.4
Identities = 39/194 (20%), Positives = 78/194 (40%), Gaps = 12/194 (6%)
Query: 100 MFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARM-SND 158
+F+ ++ + S+ F + ++TASDD ++L+ + + V S+
Sbjct: 25 VFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHP 84
Query: 159 GSIIASCSD--DKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSG-CYVAVATSHGNVKL 215
++I S + D S +L +L + + +K + L+ G C+++ + V L
Sbjct: 85 TTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDR-TVLL 143
Query: 216 YDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILD--LLEGHP--IFTLSG 271
+D R + A + I + G +++ D + E P IF++ G
Sbjct: 144 WDQRVEKCQGLLRVQGR---PAAAYDDQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGG 200
Query: 272 HNGPVNAVNFSPTG 285
N V FS G
Sbjct: 201 DLSEANVVKFSNDG 214
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 48.8 bits (111), Expect = 2e-05
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 14/237 (5%)
Query: 93 TVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTH------KHKFISSFVGH 146
TV + ++ V V +S DG + A +V ++S H H I + G+
Sbjct: 407 TVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGN 466
Query: 147 TNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSG--CYV 204
N + ++ N + +C +DK+ K+W+ +G +HT++ + + H ++
Sbjct: 467 VNDLAFSQ-PNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFI 525
Query: 205 AVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILT--ASKDGKMKILDL-- 260
G +K + Y + T +A G+ + + SK+G+ I++
Sbjct: 526 FSTAVDGKIKAWLYDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNE 585
Query: 261 LEGHPIFTLSG-HNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEG 316
EG T G V V F + F AGD+ V W + DL S + G
Sbjct: 586 SEGAVKRTYLGLGKRSVGVVQFDTMKNKFLVAGDEFQVKFWDMDSVDLLSSTAAEGG 642
Score = 44.4 bits (100), Expect = 4e-04
Identities = 38/211 (18%), Positives = 90/211 (42%), Gaps = 11/211 (5%)
Query: 16 QLKGHKNAITALYYNPNDQQ--IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT--F 71
++ H + L ++ +QQ + T D ++ +WD + + F+GH+ V V
Sbjct: 459 EIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQ 518
Query: 72 SSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDK---- 127
+ +++ S + D ++ W+ GS + A ++ S+ + +DG+++ + K
Sbjct: 519 KENIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGES 578
Query: 128 VVKLWSTHKHKFISSFVG-HTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYK 186
+ W+ + +++G V + + D+ K W++DS + + +
Sbjct: 579 FIVEWNESEGAVKRTYLGLGKRSVGVVQFDTMKNKFLVAGDEFQVKFWDMDSVDLLSSTA 638
Query: 187 DLKG--HGLHLAWHPSGCYVAVATSHGNVKL 215
G L + G +AV+T+ +K+
Sbjct: 639 AEGGLPSSPCLRINKEGTLLAVSTTDNGIKI 669
Score = 38.3 bits (85), Expect = 0.024
Identities = 37/179 (20%), Positives = 74/179 (41%), Gaps = 7/179 (3%)
Query: 127 KVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYK 186
+VVKL T+ I + + ++ +++ + + +LW SG + T
Sbjct: 780 RVVKLIYTNSGGAILALAENAAHKLWKWQKSERNLLGKANSNVPPQLWQPSSG-VLMTND 838
Query: 187 DLKGHGLHL----AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPS 242
+G+ + A + YV ++ S G + L+++ T + + A T +A HP
Sbjct: 839 TREGNKEDVVPCFALSKNDSYV-MSASGGKISLFNMMTFKTMTTFMAPPPAATSLAFHPQ 897
Query: 243 GSYILTASKD-GKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ I+ D ++I ++ L GH V + FS + S+G D + +W
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVW 956
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 23 AITALYYNPNDQQIATSSLDNS-VLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASA 81
A T+L ++P D I +D+S + ++++R + +GH + V + FS+ + S+
Sbjct: 888 AATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSS 947
Query: 82 SRDKTVRIW 90
D + +W
Sbjct: 948 GADSQLCVW 956
Score = 35.5 bits (78), Expect = 0.17
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
Query: 60 QGHDEAVMDV-TFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGS 118
+G+ E V+ S + Y+ SAS K + T T F A S+ F +
Sbjct: 841 EGNKEDVVPCFALSKNDSYVMSASGGKISLFNMMTFKTMT-TFMAPPPAATSLAFHPQDN 899
Query: 119 KIITAS-DDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
II DD +++++ + S GH V SN +++ S D +W++D
Sbjct: 900 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMD 959
Query: 178 SGE 180
E
Sbjct: 960 GWE 962
Score = 29.9 bits (64), Expect = 8.5
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRG 52
+K +LKGH+ +T L ++ + +S D+ + +W + G
Sbjct: 921 VKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDG 960
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 48.8 bits (111), Expect = 2e-05
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 14/237 (5%)
Query: 93 TVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTH------KHKFISSFVGH 146
TV + ++ V V +S DG + A +V ++S H H I + G+
Sbjct: 407 TVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGN 466
Query: 147 TNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSG--CYV 204
N + ++ N + +C +DK+ K+W+ +G +HT++ + + H ++
Sbjct: 467 VNDLAFSQ-PNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFI 525
Query: 205 AVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILT--ASKDGKMKILDL-- 260
G +K + Y + T +A G+ + + SK+G+ I++
Sbjct: 526 FSTAVDGKIKAWLYDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNE 585
Query: 261 LEGHPIFTLSG-HNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEG 316
EG T G V V F + F AGD+ V W + DL S + G
Sbjct: 586 SEGAVKRTYLGLGKRSVGVVQFDTMKNKFLVAGDEFQVKFWDMDSVDLLSSTAAEGG 642
Score = 44.4 bits (100), Expect = 4e-04
Identities = 38/211 (18%), Positives = 90/211 (42%), Gaps = 11/211 (5%)
Query: 16 QLKGHKNAITALYYNPNDQQ--IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT--F 71
++ H + L ++ +QQ + T D ++ +WD + + F+GH+ V V
Sbjct: 459 EIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQ 518
Query: 72 SSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDK---- 127
+ +++ S + D ++ W+ GS + A ++ S+ + +DG+++ + K
Sbjct: 519 KENIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGES 578
Query: 128 VVKLWSTHKHKFISSFVG-HTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYK 186
+ W+ + +++G V + + D+ K W++DS + + +
Sbjct: 579 FIVEWNESEGAVKRTYLGLGKRSVGVVQFDTMKNKFLVAGDEFQVKFWDMDSVDLLSSTA 638
Query: 187 DLKG--HGLHLAWHPSGCYVAVATSHGNVKL 215
G L + G +AV+T+ +K+
Sbjct: 639 AEGGLPSSPCLRINKEGTLLAVSTTDNGIKI 669
Score = 38.3 bits (85), Expect = 0.024
Identities = 37/179 (20%), Positives = 74/179 (41%), Gaps = 7/179 (3%)
Query: 127 KVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYK 186
+VVKL T+ I + + ++ +++ + + +LW SG + T
Sbjct: 780 RVVKLIYTNSGGAILALAENAAHKLWKWQKSERNLLGKANSNVPPQLWQPSSG-VLMTND 838
Query: 187 DLKGHGLHL----AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPS 242
+G+ + A + YV ++ S G + L+++ T + + A T +A HP
Sbjct: 839 TREGNKEDVVPCFALSKNDSYV-MSASGGKISLFNMMTFKTMTTFMAPPPAATSLAFHPQ 897
Query: 243 GSYILTASKD-GKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+ I+ D ++I ++ L GH V + FS + S+G D + +W
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVW 956
Score = 35.9 bits (79), Expect = 0.13
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 23 AITALYYNPNDQQIATSSLDNS-VLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASA 81
A T+L ++P D I +D+S + ++++R + +GH + V + FS+ + S+
Sbjct: 888 AATSLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSS 947
Query: 82 SRDKTVRIW 90
D + +W
Sbjct: 948 GADSQLCVW 956
Score = 35.5 bits (78), Expect = 0.17
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
Query: 60 QGHDEAVMDV-TFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGS 118
+G+ E V+ S + Y+ SAS K + T T F A S+ F +
Sbjct: 841 EGNKEDVVPCFALSKNDSYVMSASGGKISLFNMMTFKTMT-TFMAPPPAATSLAFHPQDN 899
Query: 119 KIITAS-DDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
II DD +++++ + S GH V SN +++ S D +W++D
Sbjct: 900 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMD 959
Query: 178 SGE 180
E
Sbjct: 960 GWE 962
Score = 29.9 bits (64), Expect = 8.5
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRG 52
+K +LKGH+ +T L ++ + +S D+ + +W + G
Sbjct: 921 VKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDG 960
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 48.8 bits (111), Expect = 2e-05
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 21 KNAITALYYNPN-DQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA 79
++ +++L +N QIA+S+ D V +WD+ + + H + V + SS+ +
Sbjct: 583 RSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLL 642
Query: 80 SASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSD-GSKIITASDDKVVKLWSTHKHK 138
++ D + S G K + V VQF SD G + S D V + K
Sbjct: 643 ASGSDDGTGV-------SIGTIKTKA-NVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPK 694
Query: 139 F-ISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNL 176
+ + +GH+ V + D S + S S D + KLW+L
Sbjct: 695 IPLCTMIGHSKTVSYVKFV-DSSTLVSSSTDNTLKLWDL 732
Score = 43.2 bits (97), Expect = 9e-04
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 17/195 (8%)
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSN-DGSIIASCSDDKSTKLWNL 176
S+I +++ D VV++W + + ++ H V +S+ D +++AS SDD
Sbjct: 597 SQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDD-------- 648
Query: 177 DSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSI-HNEAVT 235
+G I T K SG +A ++ V YD+R + I H++ V+
Sbjct: 649 GTGVSIGTIKTKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVS 708
Query: 236 QVAIHPSGSYILTASKDGKMKILDL------LEGHPIFTLSGHNGPVNAVNFSPTGDTFS 289
V S S ++++S D +K+ DL + P+ + +GH N V S + +
Sbjct: 709 YVKFVDS-STLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFVGLSVSDGYIA 767
Query: 290 SAGDDKLVFIWKTNF 304
+ + VF++ F
Sbjct: 768 TGSETNEVFVYHKAF 782
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 48.8 bits (111), Expect = 2e-05
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 15/193 (7%)
Query: 140 ISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHL---- 195
+ + VG N V N +I+ D+++ W+LDS + + G+
Sbjct: 116 LDAHVGKINCVLWCPSGNSDKLISM--DEQNLVFWSLDSSKKSAEVLSKESAGMRHSLSG 173
Query: 196 -AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKD-G 253
AW+P ATS +++ +D+RT + + SI V V + +IL ++ D
Sbjct: 174 GAWNPHDVNSVAATSESSIQFWDLRT--MKKNNSIERAHVRNVDYNLKREHILVSADDES 231
Query: 254 KMKILDLLE-GHPIFTLSGHNGPVNAVNFSPT-GDTFSSAGDDKLVFIWKTNFTDLSSES 311
+ + DL + P+ L GH AV +P + S G D V +W F SSE
Sbjct: 232 GIHLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW---FASASSEH 288
Query: 312 KENEGQNMITGQR 324
K +E + QR
Sbjct: 289 KTSESPVEASRQR 301
Score = 33.5 bits (73), Expect = 0.69
Identities = 22/122 (18%), Positives = 52/122 (42%), Gaps = 3/122 (2%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
L K+ G +++++ +NP+D ++ ++S+ WDLR ++ + +D
Sbjct: 160 LSKESAGMRHSLSGGAWNPHDVNSVAATSESSIQFWDLRTMKKNNSIERAHVRNVDYNLK 219
Query: 73 SSGKYMASASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSSDGSK-IITASDDKVVK 130
+ SA + + +W + H+ +V+ + + + I++ D V
Sbjct: 220 RE-HILVSADDESGIHLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVN 278
Query: 131 LW 132
LW
Sbjct: 279 LW 280
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 48.8 bits (111), Expect = 2e-05
Identities = 41/185 (22%), Positives = 82/185 (44%), Gaps = 22/185 (11%)
Query: 56 SYRFQGHDEAVMDVTFSSSGKYMASASRDKT-----VRIWVPTVTGSTGMFKAHSQTVRS 110
S++ GH + + G +AS+ + ++ + +W + G ++HS TV
Sbjct: 593 SHKLYGHGNELFSLCSDHKGNLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTH 652
Query: 111 VQFSSDGSKIITASDDKVVKLWSTHK-------HKFISSFVGHTNWVRCARMSNDGSIIA 163
++FS D + +++ S D+ ++S + HK ++ H + + G A
Sbjct: 653 LEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQFA 712
Query: 164 SCSDDKSTKLWNLDSGECIHTYKDLKGHG---LHLAW------HPSGCYVAVATSHGNVK 214
+ S DK+ K+W++++ I L G +AW SGC VAV G ++
Sbjct: 713 TSSRDKTVKIWSVENDARIKQILVLPPFGSSVTAVAWTGLDRNEKSGC-VAVGMESGLIE 771
Query: 215 LYDIR 219
L +++
Sbjct: 772 LSNVK 776
Score = 41.5 bits (93), Expect = 0.003
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 16 QLKGHKNAITALYYNPNDQQIATSSLDNS-----VLLWDLRGTMRSY-RFQGHDEAVMDV 69
+L GH N + +L + +A+S S + LW++ GT ++ R Q H V +
Sbjct: 595 KLYGHGNELFSLCSDHKGNLVASSCKAQSASMAEIWLWEV-GTWKAVGRLQSHSLTVTHL 653
Query: 70 TFSSSGKYMASASRDKTVRIWVPTVTGS-------TGMFKAHSQTVRSVQFSSDGSKIIT 122
FS + S SRD+ ++ T + +AH + + + ++ G + T
Sbjct: 654 EFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQFAT 713
Query: 123 ASDDKVVKLWS 133
+S DK VK+WS
Sbjct: 714 SSRDKTVKIWS 724
Score = 37.9 bits (84), Expect = 0.032
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 28 YYNPNDQQIATSSLDNSVLLW-DLRGTMRSYRFQ------GHDEAVMDVTFSSSGKYMAS 80
+++PN I + LW ++ + S +Q GH AV DVT++ +G+Y+ S
Sbjct: 373 HWSPNSLSILAHGYGGAFHLWRNVSSSKESENWQMQKVPSGHFAAVTDVTWARTGEYLLS 432
Query: 81 ASRDKTVRIW 90
S+D+T R++
Sbjct: 433 VSQDQTTRVF 442
Score = 35.1 bits (77), Expect = 0.23
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMR 55
L +++ HK I A +NP Q ATSS D +V +W + R
Sbjct: 688 LMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDAR 730
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 205 AVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLE-- 262
A + S + L+++ T V H+ VT + + +L+ S+D + +
Sbjct: 621 AQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTD 680
Query: 263 ----GHPIFT-LSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
H + + H + A +++P G F+++ DK V IW
Sbjct: 681 NGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIW 723
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Query: 23 AITALYYNPNDQQIATSSLDNSVLLW--DLRGTMRSY-RFQGHDEAVMDVTFS------- 72
++ L NP +A LDN + L+ + G S +GH + + + FS
Sbjct: 180 SLAELPQNPGRFALALGGLDNKIKLYSGERTGKFTSVCELKGHTDWIRSLDFSLPLHTTE 239
Query: 73 --SSGKYMASASRDKTVRIWVPTVTGSTGMFK 102
+ + S+S+DK +RIW + G G ++
Sbjct: 240 EIPNSIMLVSSSQDKVIRIWKLVLVGDVGSWR 271
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 48.4 bits (110), Expect = 2e-05
Identities = 78/340 (22%), Positives = 145/340 (42%), Gaps = 48/340 (14%)
Query: 18 KGHKNAITALYYNPNDQQIATSSLD----NSVLLWDLRGTMRSYRFQGHDEAVMDV-TFS 72
+ H A+ +L + ++ + TS +D SV W+L + H+E V D+ S
Sbjct: 230 RAHHGALRSLVVSEDECTVFTSGIDPGFKGSVQKWELASLSCVSSYHAHEEVVNDIGILS 289
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLW 132
S+GK AS D T+ +W + TG + S + + Q SSD S ++
Sbjct: 290 STGKV---ASCDGTIHVW-NSQTGKLISLFSESPSDQD-QASSDPSSKNNSNP------C 338
Query: 133 STHKHKFISSFVGHTNWVRCARMSN--DGSIIAS---------CSDDKSTKLWN---LDS 178
+ H +SS + N C D I+ + + + +LW ++S
Sbjct: 339 NRHASHGLSSGIFDENLYTCMHYLEYMDQLIVGTGFGALRFIDLARGQKLELWGGEAIES 398
Query: 179 G-----ECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEA 233
G + + HG + PS ++A S G +L+D+R + + + H+
Sbjct: 399 GFTSLVSALCSGGSQTKHGDGASVSPS--WIAAGFSSGQCRLFDLRENGFISSWRAHDGY 456
Query: 234 VTQVAIHPSGSYILTASKDGKMKILDLLEG--HPIFTLSGHNGPVNAVNFSPTG-DTFSS 290
VT++ + P ++++S D ++I DL + F + GHN V+ FS G D S
Sbjct: 457 VTKL-VAPESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGVS--GFSIWGKDVISI 513
Query: 291 AGDDKLVFIWKTNFTDLSSESKENEGQNMITGQRHLTEEG 330
+ ++ +F S + +E + Q +I + ++ E+G
Sbjct: 514 SRNNIGIFSLAK-----SQDEEEQQQQRIIPQKLYMAEKG 548
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 48.4 bits (110), Expect = 2e-05
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 5/159 (3%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYM 78
GH +T L +P++ + T S D++VLLW + S S+S +
Sbjct: 2666 GHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSRTSVSEPSTGSGAPSSTSNTNL 2725
Query: 79 ASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHK 138
A+ +K + + G + + H + + SSD ++++S+ V L S K +
Sbjct: 2726 ANTLANKGKKC---RLEGPIQVLRGHRRELVCCCVSSDQGVVVSSSESSDVLLHSIRKGR 2782
Query: 139 FISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
I VG C +S+DG I+A S + S ++ ++
Sbjct: 2783 LIRRLVGVKADSLC--ISSDGVIMAWSSSEGSISVFTIN 2819
Score = 43.2 bits (97), Expect = 9e-04
Identities = 40/188 (21%), Positives = 73/188 (38%), Gaps = 6/188 (3%)
Query: 32 NDQQIATSS-LDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW 90
+D +I T DNS+ L G GH V + S ++ + SRD TV +W
Sbjct: 2636 SDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLW 2695
Query: 91 VPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWV 150
++ + T S+ + + +K K I GH +
Sbjct: 2696 RIHKAFTSRTSVSEPSTGSGAPSSTSNTNLANTLANKGKK---CRLEGPIQVLRGHRREL 2752
Query: 151 RCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSH 210
C +S+D ++ S S+ L ++ G I +K L ++ G +A ++S
Sbjct: 2753 VCCCVSSDQGVVVSSSESSDVLLHSIRKGRLIRRLVGVKADSLCIS--SDGVIMAWSSSE 2810
Query: 211 GNVKLYDI 218
G++ ++ I
Sbjct: 2811 GSISVFTI 2818
Score = 37.1 bits (82), Expect = 0.056
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 111 VQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKS 170
+ +SDG I D +KL S+ K + + GH V C +S D + + + S D +
Sbjct: 2632 IAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDST 2691
Query: 171 TKLWNL 176
LW +
Sbjct: 2692 VLLWRI 2697
Score = 35.5 bits (78), Expect = 0.17
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 237 VAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKL 296
+AI G I D +K++ + T GH PV + SP + + D
Sbjct: 2632 IAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDST 2691
Query: 297 VFIWKTN--FTDLSSESKENEG 316
V +W+ + FT +S S+ + G
Sbjct: 2692 VLLWRIHKAFTSRTSVSEPSTG 2713
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 48.4 bits (110), Expect = 2e-05
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 207 ATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPI 266
A + G+V ++D L++ + H +AV +AIHPSG L +D +L+L+ G
Sbjct: 106 AAADGSVAIFDTDPFVLLKSFRPHKKAVNDLAIHPSGKLALAVYRDEFFAMLNLVRGKRS 165
Query: 267 FTLS-GHNGPVNAVNFSPTGDTFSSAGDDKL 296
F GH + V F P+G+ F +K+
Sbjct: 166 FCCRLGHE--ASLVKFDPSGERFYMVVSNKV 194
Score = 43.6 bits (98), Expect = 6e-04
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 7/173 (4%)
Query: 20 HKNAITAL-YYNPND----QQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
H +ITAL +Y P+ + + +++ D SV ++D + F+ H +AV D+ S
Sbjct: 82 HAASITALSFYTPSSLSFPRNLISAAADGSVAIFDTDPFVLLKSFRPHKKAVNDLAIHPS 141
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
GK + RD+ + + V G V+F G + +KV S
Sbjct: 142 GKLALAVYRDEFFAM-LNLVRGKRSFCCRLGHEASLVKFDPSGERFYMVVSNKVGVHQSE 200
Query: 135 HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKD 187
+ + CA G++ +D++ W+ +SG+ ++ +D
Sbjct: 201 DAKLLLELENPSRKRILCATPGESGTLFTG-GEDRAITAWDTNSGKLAYSIED 252
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 48.0 bits (109), Expect = 3e-05
Identities = 23/86 (26%), Positives = 44/86 (51%)
Query: 65 AVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITAS 124
++ + FS+ G ++A+ RD +RI+ K++ + +S DG I+T
Sbjct: 305 SINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGG 364
Query: 125 DDKVVKLWSTHKHKFISSFVGHTNWV 150
+D +V++WS K ++ GH +WV
Sbjct: 365 EDDLVQVWSMEDRKVVAWGEGHNSWV 390
Score = 37.9 bits (84), Expect = 0.032
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 222 NLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNF 281
N V + I ++ +A G+++ T +DG ++I D L + + G + ++
Sbjct: 294 NPVARWHICQGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSW 353
Query: 282 SPTGDTFSSAGDDKLVFIW 300
S G + G+D LV +W
Sbjct: 354 SMDGKYILTGGEDDLVQVW 372
Score = 37.5 bits (83), Expect = 0.042
Identities = 15/76 (19%), Positives = 37/76 (48%)
Query: 107 TVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCS 166
++ S+ FS+DG+ + T D ++++ K + + + C S DG I +
Sbjct: 305 SINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGG 364
Query: 167 DDKSTKLWNLDSGECI 182
+D ++W+++ + +
Sbjct: 365 EDDLVQVWSMEDRKVV 380
Score = 37.5 bits (83), Expect = 0.042
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 13/126 (10%)
Query: 195 LAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGK 254
+A+ G ++A G ++++D T LV + A+ + G YILT +D
Sbjct: 309 IAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDL 368
Query: 255 MKILDLLEGHPIFTLSGHNGPVNAVNF-----SPTGD--------TFSSAGDDKLVFIWK 301
+++ + + + GHN V+ V F SP D F S G D + +W
Sbjct: 369 VQVWSMEDRKVVAWGEGHNSWVSGVAFDSNWSSPNSDGSGEHVMYRFGSVGQDTQLLLWD 428
Query: 302 TNFTDL 307
++
Sbjct: 429 LEMDEI 434
Score = 31.1 bits (67), Expect = 3.7
Identities = 20/89 (22%), Positives = 40/89 (44%)
Query: 156 SNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKL 215
SNDG+ +A+ D ++++ + + + K G L +W G Y+ V++
Sbjct: 312 SNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQV 371
Query: 216 YDIRTHNLVQYYSIHNEAVTQVAIHPSGS 244
+ + +V + HN V+ VA + S
Sbjct: 372 WSMEDRKVVAWGEGHNSWVSGVAFDSNWS 400
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 48.0 bits (109), Expect = 3e-05
Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 19/220 (8%)
Query: 15 KQLKGHKNAITALYYN-PNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSS 73
+ L HK + L +N + Q+A+ + D +V +WDL + + + M SS
Sbjct: 109 RDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLANPSKPSHYLKGTGSYMQSEISS 168
Query: 74 SG------KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRS--VQFSSDG-SKIITAS 124
+AS S + T IW + + TVR +Q+ D ++I+ AS
Sbjct: 169 LSWNKGFQHVLASTSHNGTTVIWD---VNNEKIITDLKTTVRCSVLQWDPDHFNQILVAS 225
Query: 125 DDKV---VKLWST-HKHKFISSFVGHTNWVRCARMS-NDGSIIASCSDDKSTKLWNLDSG 179
D+ VKL + + +FVGH V +D + +C D T WN +G
Sbjct: 226 DEDSSPNVKLLDIRYLQSPVRTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTG 285
Query: 180 ECIHTYKDLKGHGLHLAWHPSGCYVAVATS-HGNVKLYDI 218
+ + + + W+P V A+S G + +Y++
Sbjct: 286 KIVAELPTGQNWNFDVHWYPKMPGVISASSVDGKIGIYNL 325
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 47.6 bits (108), Expect = 4e-05
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 144 VGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGC- 202
+ H + V C ++ D ++ S S DK+ K+W L +C+ + ++ H + SG
Sbjct: 242 IRHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCL---ESIEAHDDAVNTVVSGFD 298
Query: 203 -YVAVATSHGNVKLY--DIR----THNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKM 255
V ++ G +K++ +++ H LVQ AVT +A++ + + + S DG
Sbjct: 299 DLVFTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDG-- 356
Query: 256 KILDLLEGHPIFTLSG--HNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
++ E T G H + + + G S G DK + +WK N
Sbjct: 357 -TVNFWERQKYLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKRN 405
Score = 46.4 bits (105), Expect = 9e-05
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 11/172 (6%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA 79
H +A++ L N + + + S D ++ +W L + + HD+AV V S +
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVV-SGFDDLVF 302
Query: 80 SASRDKTVRIWVPTVTGS------TGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
+ S D T+++W V G + V ++ + + + S D V W
Sbjct: 303 TGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWE 362
Query: 134 THKHKFISSFV-GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHT 184
K+ + GH V C ++ GS++ S DK+ +W +G+ HT
Sbjct: 363 RQKYLTHKGTIHGHRMAVLC--LATAGSLLLSGGADKNICVWK-RNGDGSHT 411
Score = 37.9 bits (84), Expect = 0.032
Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 11/200 (5%)
Query: 104 HSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIA 163
H V + + D + + S DK +K+W K + S H + V +S ++
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV-VSGFDDLVF 302
Query: 164 SCSDDKSTKLW--NLDSGECIHTYKDL----KGHGLHLAWHPSGCYVAVATSHGNVKLYD 217
+ S D + K+W + E H + + LA + + V +S G V ++
Sbjct: 303 TGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWE 362
Query: 218 IRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLL-EG-HP-IFTLSGHNG 274
R L +IH + + + +GS +L+ D + + +G H + L H G
Sbjct: 363 -RQKYLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKRNGDGSHTCLSVLMDHEG 421
Query: 275 PVNAVNFSPTGDTFSSAGDD 294
PV + + + GDD
Sbjct: 422 PVKCLAAVEEAEEDHNDGDD 441
Score = 37.1 bits (82), Expect = 0.056
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS 72
L + L +NA+TAL N D + S D +V W+ R +++ H + + +
Sbjct: 326 LVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWE-RQKYLTHKGTIHGHRMAVLCLA 384
Query: 73 SSGKYMASASRDKTVRIWVPTVTGS 97
++G + S DK + +W GS
Sbjct: 385 TAGSLLLSGGADKNICVWKRNGDGS 409
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 47.2 bits (107), Expect = 5e-05
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 113 FSSDGSKIITASDDKVVKLWSTHKHKFISSFVGH--TNWVRCARMSNDGSIIASCSDDKS 170
FS+DG + + D VK+ + GH T WV + I+AS S D
Sbjct: 114 FSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWV-VRFHPHHSEIVASGSLDLE 172
Query: 171 TKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHG-NVKLYDIRTHNLVQYYSI 229
+LWN + ECI ++ + +A+H G +AVA+ H ++ Y+ R +
Sbjct: 173 VRLWNTTTSECIRSHLFYRPIA-SIAFHAEGELLAVASGHKLHMWHYNRRGEGSSPTVVL 231
Query: 230 H-NEAVTQVAIHPSGSYILTASKDGKMKILD 259
++ V HP G+ +L ++ ++ LD
Sbjct: 232 KTRRSLRAVHFHPHGAPLLLTAEVNEIDSLD 262
Score = 38.7 bits (86), Expect = 0.018
Identities = 55/229 (24%), Positives = 91/229 (39%), Gaps = 13/229 (5%)
Query: 71 FSSSGKYMASASRDKTVRIWVPTVTGS-TGMFKAHSQTVRSVQFSSDGSKII-TASDDKV 128
FS+ G+ +AS D TV+I + TG+ + H +T V+F S+I+ + S D
Sbjct: 114 FSTDGRTLASTHGDHTVKI-IDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLE 172
Query: 129 VKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD-SGECIHTYKD 187
V+LW+T + I S + + + +G ++A S K +W+ + GE
Sbjct: 173 VRLWNTTTSECIRSHLFYRP-IASIAFHAEGELLAVASGHK-LHMWHYNRRGEGSSPTVV 230
Query: 188 LKGHGLHLA--WHPSGCYVAVATSHGNVKLYDIRTHNLVQY-YSIHNEAVTQVAIHPSGS 244
LK A +HP G + + + D Y + S
Sbjct: 231 LKTRRSLRAVHFHPHGAPLLLTAEVNEIDSLDSSMSRATSMGYLRYPPPAILFTSTESNQ 290
Query: 245 YILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGD 293
L A + + L P+ T SG +GP + SP+ + AGD
Sbjct: 291 TSLAAENENRTSSPPL----PLATSSGPSGPNSVPGNSPSNIFLTRAGD 335
Score = 35.5 bits (78), Expect = 0.17
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 12 CLKKQLKGHKNAITALYYNPNDQQI-ATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVT 70
CLK L GH+ + ++P+ +I A+ SLD V LW+ T R + +
Sbjct: 140 CLKV-LTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNTT-TSECIRSHLFYRPIASIA 197
Query: 71 FSSSGKYMASASRDKTVRIWVPTVTG---STGMFKAHSQTVRSVQFSSDGSKIITASD 125
F + G+ +A AS K + +W G S + +++R+V F G+ ++ ++
Sbjct: 198 FHAEGELLAVASGHK-LHMWHYNRRGEGSSPTVVLKTRRSLRAVHFHPHGAPLLLTAE 254
Score = 34.7 bits (76), Expect = 0.30
Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 153 ARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHG- 211
A S DG +AS D + K+ + ++G C+ + + +HP + + S
Sbjct: 112 AAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDL 171
Query: 212 NVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTAS 250
V+L++ T ++ + + + +A H G + AS
Sbjct: 172 EVRLWNTTTSECIRSHLFY-RPIASIAFHAEGELLAVAS 209
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 46.8 bits (106), Expect = 7e-05
Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 29/259 (11%)
Query: 61 GHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKI 120
GH EAV V +S K + ++ D VR+W S K T+R++ ++D +
Sbjct: 160 GHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRAL--AADTKLL 217
Query: 121 ITASDDKVVKLWST-------------HKHKFISSFVGHTNWVRCARMSNDGSIIASCSD 167
+ D + W + K K GH + ++ D + I S S
Sbjct: 218 VAGGTDGFIHCWKSLDGLRNLFDLTGFQKEKTEFRLWGHEGPI--TSLALDMTSIFSGSW 275
Query: 168 DKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHN-LVQY 226
D S ++W+ S +C+ T + LA H + +TS +V ++D+ + L
Sbjct: 276 DMSVRIWDRSSMKCVKTLRH-SDWVWGLAPHET---TLASTSGSDVYIWDVSSETPLAII 331
Query: 227 YSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLE-GHP-----IFTLSGHNGPVNAVN 280
H +A +G ++ T +DG +K+ ++ G I H PV +++
Sbjct: 332 PDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIRRYGSETSVVLISQWMPHTSPVYSLS 391
Query: 281 FSPTGDTFSSAGDDKLVFI 299
F S++GD KL I
Sbjct: 392 FEFPW-LVSASGDGKLALI 409
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 46.8 bits (106), Expect = 7e-05
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 19 GHKNAITALYYNPNDQQI-ATSSLDNSVLLWDLR-GTMRSYRFQGHDEAVMDVTFSSSGK 76
GH ++ L ++P ++ + A+ S+D SV +WD+R G + F+ H+ V ++++
Sbjct: 267 GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLAS 326
Query: 77 YM-ASASRDKTVRIW-VPTVTGSTGM---FKAHSQTVRSVQFSS-DGSKIITASDDKVVK 130
M AS S D T I + + G + F+ H + S+++S+ + S + S D +
Sbjct: 327 CMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLT 386
Query: 131 LWSTHKHK 138
+W K
Sbjct: 387 IWDLSLEK 394
Score = 39.9 bits (89), Expect = 0.008
Identities = 36/173 (20%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 101 FKAHSQTVRSVQFS-SDGSKIITASDDKVVKLWSTHKHKFISS---FVGHTNWVRCARMS 156
F H ++ +S + ++++ ++ LW + F GHT V + S
Sbjct: 219 FSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWS 278
Query: 157 N-DGSIIASCSDDKSTKLWNLDSGEC-IHTYKDLKGHGLHLAWHP-SGCYVAVATSHGNV 213
+ ++ ASCS D S +W++ G+ ++K ++W+ + C +A + G
Sbjct: 279 PAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLASCMLASGSDDGTF 338
Query: 214 KLYDIRT----HNLVQYYSIHNEAVTQV--AIHPSGSYILTASKDGKMKILDL 260
+ D+R +V ++ H +T + + H + + +T S D ++ I DL
Sbjct: 339 SIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVT-SGDNQLTIWDL 390
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 46.4 bits (105), Expect = 9e-05
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 59 FQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSS-DG 117
F GH + V+D+++S S + + S+S DKTVR+W +F AH+ V VQF+ D
Sbjct: 515 FTGHLDDVLDLSWSRS-QLLLSSSMDKTVRLWDIETQSCLKLF-AHNDYVTCVQFNPLDE 572
Query: 118 SKIITASDDKVVKLWSTHKHKFI 140
I+ S D +++W+ + +
Sbjct: 573 DYFISGSLDAKIRIWNISNRQVV 595
Score = 39.9 bits (89), Expect = 0.008
Identities = 47/244 (19%), Positives = 101/244 (41%), Gaps = 22/244 (9%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
++++ H+ I + ++P+ +A++ D ++ +W+++ +G ++ + S S
Sbjct: 405 QEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQECEIMSMNEG---SLTPIHPSMS 461
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
G S+ D G T M K +Q V + + SD
Sbjct: 462 GSTDKSSEGDAAEVSQDKKKKGKTSMSKKGNQIPDYVHAPET---VFSLSD--------- 509
Query: 135 HKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH 194
K I SF GH + V S ++ S S DK+ +LW++++ C+ + +
Sbjct: 510 ---KPICSFTGHLDDVLDLSWSRS-QLLLSSSMDKTVRLWDIETQSCLKLFAH-NDYVTC 564
Query: 195 LAWHP-SGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDG 253
+ ++P Y + +++++I +V++ + E VT V P G S +G
Sbjct: 565 VQFNPLDEDYFISGSLDAKIRIWNISNRQVVEWNDL-KEMVTAVCYTPDGQAAFVGSING 623
Query: 254 KMKI 257
++
Sbjct: 624 HCRL 627
Score = 39.1 bits (87), Expect = 0.014
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK-Y 77
GH + + L ++ Q + +SS+D +V LWD+ T + H++ V V F+ + Y
Sbjct: 517 GHLDDVLDLSWS-RSQLLLSSSMDKTVRLWDIE-TQSCLKLFAHNDYVTCVQFNPLDEDY 574
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKH 137
S S D +RIW + + V +V ++ DG S + +L+S
Sbjct: 575 FISGSLDAKIRIW-NISNRQVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLYSAEDC 633
Query: 138 K 138
K
Sbjct: 634 K 634
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 259 DLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSS 309
DL H + H G + + FSP +SAG+D + +W+ ++ S
Sbjct: 397 DLSALHMCQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQECEIMS 447
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 46.0 bits (104), Expect = 1e-04
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 7 TTPEPCLKKQLKGHKNAITALYYNPNDQQ----IATSSLDNSVLLWDLRGT---MRSYRF 59
++P+ KG + + P + Q + D S+LLWD+R + S +F
Sbjct: 201 SSPDESPNASTKGRGMCMAVQLFCPPESQGFLHVLAGYEDGSILLWDIRNAKIPLTSVKF 260
Query: 60 QGHDEAVMDVTFSSS-GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSS--- 115
H E V+ ++ +SS ++ + DK V + TGS + K + V +S
Sbjct: 261 --HSEPVLSLSVASSCDGGISGGADDKIVMYNLNHSTGSCTIRKEITLERPGVSGTSIRV 318
Query: 116 DGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWN 175
DG TA D +++++ K ++ H S D ++AS S+D + LW
Sbjct: 319 DGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALWK 378
Query: 176 L 176
L
Sbjct: 379 L 379
Score = 44.4 bits (100), Expect = 4e-04
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 228 SIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDT 287
++ V+ +I G TA D ++++ + +G+ + L H NAV++SP +
Sbjct: 305 TLERPGVSGTSIRVDGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCEL 364
Query: 288 FSSAGDDKLVFIWK 301
+SA +D V +WK
Sbjct: 365 MASASEDATVALWK 378
Score = 39.5 bits (88), Expect = 0.010
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 230 HNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHN--GPVNAVNFSP--TG 285
H +V V+ HPS S + T S DG+++I D ++ + + H+ V AV SP
Sbjct: 16 HRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPWLGE 75
Query: 286 DTFSSAGDDKLVFIWKTNFTDLSSE 310
D S G D V W LS +
Sbjct: 76 DKIISQGRDGTVKCWDIEDGGLSRD 100
Score = 37.5 bits (83), Expect = 0.042
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 100 MFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHT--NWVRCARMS- 156
+ + H +V V F S + T S D +++W T +H+ +SS H+ N V S
Sbjct: 12 VLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASP 71
Query: 157 --NDGSIIASCSDDKSTKLWNLDSG 179
+ II S D + K W+++ G
Sbjct: 72 WLGEDKII-SQGRDGTVKCWDIEDG 95
Score = 37.5 bits (83), Expect = 0.042
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
GK A+A D +R++ + + K H T +V +S D + +AS+D V LW
Sbjct: 320 GKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALWKL 379
Query: 135 H-KHK 138
+ HK
Sbjct: 380 YPPHK 384
Score = 36.3 bits (80), Expect = 0.098
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 60 QGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQT--VRSVQFSS-- 115
+GH +VMDV+F S + + S D +RIW + AHS+ V +V S
Sbjct: 14 RGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPWL 73
Query: 116 DGSKIITASDDKVVKLW 132
KII+ D VK W
Sbjct: 74 GEDKIISQGRDGTVKCW 90
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 9 PEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEA--V 66
P P L+GH++++ + ++P+ + T S D + +WD H A V
Sbjct: 5 PPPDPVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGV 64
Query: 67 MDVTFSS--SGKYMASASRDKTVRIW 90
+ V S + S RD TV+ W
Sbjct: 65 LAVAASPWLGEDKIISQGRDGTVKCW 90
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 46.0 bits (104), Expect = 1e-04
Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 6/158 (3%)
Query: 109 RSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDD 168
+ + FS DGSK+ D +++ I +R S D +A+ S D
Sbjct: 126 KCMAFSFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTSTD 185
Query: 169 KSTKLWNLDSGECIHTYKDLKGHGLHLA-WHPSGC--YVAVATSHGN---VKLYDIRTHN 222
S ++W + G + T + + L + G ++ A G+ V +YDI T
Sbjct: 186 GSARIWKAEDGFPLSTLERSGDENIELCRFSKDGTKPFLFCAAQRGDTPMVNVYDISTWK 245
Query: 223 LVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDL 260
+ + + + + +A+ G YI KDG + + ++
Sbjct: 246 KLGFKKLSRKTASTMAVSLDGKYIALGGKDGDVSVAEV 283
Score = 44.0 bits (99), Expect = 5e-04
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 69 VTFSSSGKYMASASRDKTVRI--WVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDD 126
+ FS G +A D +RI W P ++ KAH +++R + FS D + T S D
Sbjct: 128 MAFSFDGSKLAVGGVDGCLRIMEW-PNLSVILDEPKAH-KSIRDMDFSLDSEFLATTSTD 185
Query: 127 KVVKLWSTHKHKFISSFV--GHTNWVRCARMSNDGS-----IIASCSDDKSTKLWNLDSG 179
++W +S+ G N C R S DG+ A D ++++ +
Sbjct: 186 GSARIWKAEDGFPLSTLERSGDENIELC-RFSKDGTKPFLFCAAQRGDTPMVNVYDISTW 244
Query: 180 ECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYS-IH-NEAVTQV 237
+ + K + +A G Y+A+ G+V + +++T + Y +H +++ +
Sbjct: 245 KKLGFKKLSRKTASTMAVSLDGKYIALGGKDGDVSVAEVKTMEIYHYSKRLHLGQSIASL 304
Query: 238 AIHPSGSYILTASKD-GKM 255
PS +LT S + G+M
Sbjct: 305 EFCPSERVMLTTSSEWGEM 323
Score = 36.3 bits (80), Expect = 0.098
Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 7/126 (5%)
Query: 183 HTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDI------RTHNLVQYYSIHNEAVTQ 236
HT KD G + ++ HP G Y +TS G KL+++ T + + N + +
Sbjct: 67 HTLKDSDGDPVAVSVHPGGDYFVCSTSKGGCKLFELVGGATGITILAKELLPLQNAGLQK 126
Query: 237 -VAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDK 295
+A GS + DG ++I++ I + + ++FS + ++ D
Sbjct: 127 CMAFSFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTSTDG 186
Query: 296 LVFIWK 301
IWK
Sbjct: 187 SARIWK 192
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 45.6 bits (103), Expect = 2e-04
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 9/177 (5%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDL-RGTMRSYRFQGHDEAVMDVTFSSSGKYM-ASA 81
+T+++ N DQ S V L+D+ RGT H E + V FS+ ++ A++
Sbjct: 543 LTSVHANSTDQLFLASGYSKDVALYDIGRGTRLQVFANMHQEHINVVKFSNHSPFLFATS 602
Query: 82 SRDKTVRIWVPTVTGSTGMFKAHSQTVR-SVQFSSDGSKIITASDDKVVKLWST-----H 135
S DK V++W S + A S V FS D ++ ++ D V+ T H
Sbjct: 603 SFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVRQLLTVDGRLH 662
Query: 136 KHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHG 192
+ I V N+ R M+ + II+ D+ ++ +G + L+G+G
Sbjct: 663 LNFEIVPRVSSMNYTRSYYMNGNDYIISGSCDENVIRVCCAQTGRRLRDV-TLEGNG 718
Score = 31.5 bits (68), Expect = 2.8
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 20 HKNAITALYY-NPNDQQIATSSLDNSVLLWDLR--GTMRSYRFQGHDEAVMDVTFSSSGK 76
H+ I + + N + ATSS D V LWDLR + Y VM V FS +
Sbjct: 582 HQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQEPSRPCYTASSTKGNVM-VCFSPDDR 640
Query: 77 YMASASRDKTVR 88
Y+ +++ D VR
Sbjct: 641 YLLASAVDNEVR 652
>At1g08190.1 68414.m00905 vacuolar assembly protein, putative
(VPS41) 99.8% identical to Vacuolar assembly protein
VPS41 homolog (SP:P93043) [Arabidopsis thaliana];
similar to vacuolar assembly protein vps41 GI:1835787
from [Lycopersicon esculentum]
Length = 980
Score = 45.6 bits (103), Expect = 2e-04
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 229 IHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTF 288
+ N+A + +A+ + I + DG ++ILDLL G+ + H PVN +NF G+
Sbjct: 57 LSNDAASCIAV--AARMIALGTHDGTVRILDLL-GNQVKEFRAHTAPVNDINFDTEGEYI 113
Query: 289 SSAGDDKLVFIWKTNFTD 306
S DD V I + FTD
Sbjct: 114 GSCSDDGSVVI-NSLFTD 130
Score = 35.1 bits (77), Expect = 0.23
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 204 VAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEG 263
+A+ T G V++ D+ N V+ + H V + G YI + S DG + I L
Sbjct: 72 IALGTHDGTVRILDL-LGNQVKEFRAHTAPVNDINFDTEGEYIGSCSDDGSVVINSLFTD 130
Query: 264 HPIFTLSGHNGPVNAVNFSP 283
H P+ A++ P
Sbjct: 131 DEKMKFDYHR-PMKAISLDP 149
Score = 31.1 bits (67), Expect = 3.7
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 74 SGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDD 126
+ + +A + D TVRI + + F+AH+ V + F ++G I + SDD
Sbjct: 68 AARMIALGTHDGTVRI-LDLLGNQVKEFRAHTAPVNDINFDTEGEYIGSCSDD 119
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 45.2 bits (102), Expect = 2e-04
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 162 IASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH-LAWHPSGCYVAVATSHGNVKLYDIRT 220
+ +CS D + +W+++ + T +H +AW + + +V+ G+V+++D+R
Sbjct: 148 LGTCSIDTTCTIWDIEKS-VVETQLIAHDKEVHDIAWGEARVFASVSAD-GSVRIFDLRD 205
Query: 221 --HNLVQYYSIHNEA-VTQVAIHPSG-SYILTASKDG-KMKILDLLEGH-PIFTLSGHNG 274
H+ + Y S + + ++A + Y+ T D K+ ILD+ P+ L H
Sbjct: 206 KEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQA 265
Query: 275 PVNAVNFSPTG-DTFSSAGDDKLVFIWK 301
VNA+ ++P S GDD IW+
Sbjct: 266 SVNAIAWAPQSCKHICSGGDDTQALIWE 293
Score = 36.3 bits (80), Expect = 0.098
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 34 QQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW 90
+++ T S+D + +WD+ ++ + HD+ V D+ + + + AS S D +VRI+
Sbjct: 146 KRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA-RVFASVSADGSVRIF 201
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 45.2 bits (102), Expect = 2e-04
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 162 IASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH-LAWHPSGCYVAVATSHGNVKLYDIRT 220
+ +CS D + +W+++ + T +H +AW + + +V+ G+V+++D+R
Sbjct: 148 LGTCSIDTTCTIWDIEKS-VVETQLIAHDKEVHDIAWGEARVFASVSAD-GSVRIFDLRD 205
Query: 221 --HNLVQYYSIHNEA-VTQVAIHPSG-SYILTASKDG-KMKILDLLEGH-PIFTLSGHNG 274
H+ + Y S + + ++A + Y+ T D K+ ILD+ P+ L H
Sbjct: 206 KEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQA 265
Query: 275 PVNAVNFSPTG-DTFSSAGDDKLVFIWK 301
VNA+ ++P S GDD IW+
Sbjct: 266 SVNAIAWAPQSCKHICSGGDDTQALIWE 293
Score = 36.3 bits (80), Expect = 0.098
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 34 QQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW 90
+++ T S+D + +WD+ ++ + HD+ V D+ + + + AS S D +VRI+
Sbjct: 146 KRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA-RVFASVSADGSVRIF 201
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 45.2 bits (102), Expect = 2e-04
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 162 IASCSDDKSTKLWNLDSGECIHTYKDLKGHGLH-LAWHPSGCYVAVATSHGNVKLYDIRT 220
+ +CS D + +W+++ + T +H +AW + + +V+ G+V+++D+R
Sbjct: 148 LGTCSIDTTCTIWDIEKS-VVETQLIAHDKEVHDIAWGEARVFASVSAD-GSVRIFDLRD 205
Query: 221 --HNLVQYYSIHNEA-VTQVAIHPSG-SYILTASKDG-KMKILDLLEGH-PIFTLSGHNG 274
H+ + Y S + + ++A + Y+ T D K+ ILD+ P+ L H
Sbjct: 206 KEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQA 265
Query: 275 PVNAVNFSPTG-DTFSSAGDDKLVFIWK 301
VNA+ ++P S GDD IW+
Sbjct: 266 SVNAIAWAPQSCKHICSGGDDTQALIWE 293
Score = 36.3 bits (80), Expect = 0.098
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 34 QQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW 90
+++ T S+D + +WD+ ++ + HD+ V D+ + + + AS S D +VRI+
Sbjct: 146 KRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA-RVFASVSADGSVRIF 201
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 45.2 bits (102), Expect = 2e-04
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Query: 117 GSKIITASD-DKVVKLWSTHKHKFISSFVGHTNW-VRCARMSNDGSIIASCSDDKSTKLW 174
G+ TAS+ D V+ + +++ + F W V A +S DG ++A D+ +
Sbjct: 247 GALHFTASNNDCGVRDFDMERYQLVKHF--RFPWPVNHASLSPDGKLLAIVGDNPEGLIV 304
Query: 175 NLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSI---HN 231
+ ++G+ + T AWHP G + +++DIR NL Q ++ +
Sbjct: 305 DPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIR--NLSQSVTVLKGNL 362
Query: 232 EAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSP 283
A+ + G Y+ A + + D+ G+ G ++ ++FSP
Sbjct: 363 GAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFSP 414
Score = 41.5 bits (93), Expect = 0.003
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 199 PSGCYVAVATSHG-NVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
PSG A+++ V+ +D+ + LV+++ V ++ P G + + + I
Sbjct: 245 PSGALHFTASNNDCGVRDFDMERYQLVKHFRFP-WPVNHASLSPDGKLLAIVGDNPEGLI 303
Query: 258 LDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+D G + TLSGH A + P G TFS+ DK +W
Sbjct: 304 VDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVW 346
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTFSSSG 75
L GH + A ++P+ +T + D + +WD+R +S +G+ A+ + ++S G
Sbjct: 315 LSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDG 374
Query: 76 KYMASASRDKTVRIW 90
KYMA A V ++
Sbjct: 375 KYMAMAEPADFVHVY 389
Score = 34.7 bits (76), Expect = 0.30
Identities = 18/71 (25%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 67 MDVTFSSS----GKYMASASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSSDGSKII 121
+D +F+S+ G ++ ++DKT R+W + ++ S + K + +RS++++SDG +
Sbjct: 319 LDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMA 378
Query: 122 TASDDKVVKLW 132
A V ++
Sbjct: 379 MAEPADFVHVY 389
Score = 34.3 bits (75), Expect = 0.39
Identities = 22/112 (19%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Query: 108 VRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSD 167
V S DG + D+ + + K + + GH ++ + DG ++ +
Sbjct: 280 VNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQ 339
Query: 168 DKSTKLWNL-DSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDI 218
DK+ ++W++ + + + K G + + G Y+A+A V +YD+
Sbjct: 340 DKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDV 391
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 45.2 bits (102), Expect = 2e-04
Identities = 30/125 (24%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYM 78
GHK A++ + + N++ +A++S D+++ LWD++ + F+GH V + + +Y+
Sbjct: 547 GHKKAVSYVKFLSNNE-LASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYL 605
Query: 79 ASASRDKTVRIWVPTVT--------GSTGMFKAHSQT----VRSVQFSSDGSKIITASDD 126
A S V ++ +T GS M A + + +V + SD ++TA+
Sbjct: 606 ACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISAVCWKSDSPTMLTANSQ 665
Query: 127 KVVKL 131
+K+
Sbjct: 666 GTIKV 670
Score = 44.0 bits (99), Expect = 5e-04
Identities = 44/233 (18%), Positives = 95/233 (40%), Gaps = 7/233 (3%)
Query: 21 KNAITALYYNPNDQQ-IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFS-SSGKYM 78
++ ++ L +N +++ IA+S + V +WD+ ++ H++ V FS + +
Sbjct: 420 RSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSML 479
Query: 79 ASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK-IITASDDKVVKLWSTHK- 136
S S D V++W S + + V+++ S I S D + +
Sbjct: 480 VSGSDDCKVKVWCTRQEASVINIDMKA-NICCVKYNPGSSNYIAVGSADHHIHYYDLRNI 538
Query: 137 HKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLA 196
+ + F GH V + ++ +AS S D + +LW++ + T++ +
Sbjct: 539 SQPLHVFSGHKKAVSYVKFLSNNE-LASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVG 597
Query: 197 WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTA 249
+ Y+A + V +Y V + + + A +GSY ++A
Sbjct: 598 LTVNSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDD-AEEEAGSYFISA 649
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 44.8 bits (101), Expect = 3e-04
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 104 HSQTVRS-VQFSSDGSKIITASDDKVVKLWSTHKHKFISSFV--GHTNWVRCARMSNDGS 160
H + S + + D IT S D VK+W T+ + + F G + M+ +
Sbjct: 102 HKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSHT 161
Query: 161 IIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVA-VATSHGNVKLYDIR 219
+IA+ +DD +L ++ SG HT + + + W S +V G ++ +DIR
Sbjct: 162 LIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIR 221
Query: 220 THNLVQYYSIHNEAVTQVAIHP 241
+ + + + TQ+ + P
Sbjct: 222 RAGC---FRVLDNSQTQLGVRP 240
Score = 40.7 bits (91), Expect = 0.005
Identities = 60/276 (21%), Positives = 111/276 (40%), Gaps = 23/276 (8%)
Query: 36 IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA-SASRDKTVRIWVPTV 94
IA + D V L D+ S+ GH + VM V +S+S +++ + D +R W
Sbjct: 163 IAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRR 222
Query: 95 TGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCAR 154
G + +SQT V+ +++ K +S K S +G NW++ +
Sbjct: 223 AGCFRVLD-NSQTQLGVRPPILKRPAVSS------KFFSAAK-----SSLGDQNWLKTLQ 270
Query: 155 MSNDGS--IIASCSDDKS---TKLWNLDSGECIHTYKDLKGHGL--HLAWHPSGCYVAVA 207
+ GS + S S+ S ++ + G + +G+ L G Y+ A
Sbjct: 271 SKHTGSQSVKGSSSEKPSVEKSRQKRIHPGMLSTLDRATAHYGVVTGLKATNDGMYLLSA 330
Query: 208 TSHGNVKLYDIRT--HNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGK-MKILDLLEGH 264
S+ ++L+DI + + LV + + + + + S L K +K + G
Sbjct: 331 GSYSRIRLWDIESGRNTLVNFETGRIQTDRAIQLDTSDDPALVFVPCMKTVKGFGMWSGR 390
Query: 265 PIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
L GH VN F+ ++G D+ + +W
Sbjct: 391 TTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVW 426
Score = 38.7 bits (86), Expect = 0.018
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQG 61
L+GH ++ +N NDQ++ TS D +++W G++ QG
Sbjct: 395 LRGHYESVNTCCFNSNDQELYTSGADRQIIVWSPGGSVEDEMAQG 439
Score = 36.7 bits (81), Expect = 0.074
Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
Query: 14 KKQLKGHKNAITALYYNPNDQ-QIATSSLDNSVLLWDLRGT--MRSYRFQGHDEAVMDVT 70
K+ GHK AI++ + P D T S D+ V +WD + + ++ G +
Sbjct: 96 KQHENGHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSS 155
Query: 71 FSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKII-TASDDKVV 129
+ S +A+ + D VR+ + H V SV++S+ ++ T D +
Sbjct: 156 MAMSHTLIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAI 215
Query: 130 KLWSTHK 136
+ W +
Sbjct: 216 RFWDIRR 222
Score = 36.3 bits (80), Expect = 0.098
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 197 WHP--SGCYVAVATSHGNVKLYDIRTHNLVQYYS----IHNEAVTQVAIHPSGSYILTAS 250
W+P +G ++ + H VK++D T +V + ++ A++ +A+ S + I +
Sbjct: 111 WYPIDTGMFITGSFDH-YVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAM--SHTLIAAGT 167
Query: 251 KDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGD-TFSSAGDDKLVFIW 300
D ++++ D+ G TLSGH V +V +S + + + G D + W
Sbjct: 168 DDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFW 218
Score = 29.9 bits (64), Expect = 8.5
Identities = 23/120 (19%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDL---RGTMRSY---RFQGHDEAVMDVTFSS 73
H +T L + + ++ + + LWD+ R T+ ++ R Q +D +
Sbjct: 311 HYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQTDRAIQLDTSDDP 370
Query: 74 SGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
+ ++ K +W +T M + H ++V + F+S+ ++ T+ D+ + +WS
Sbjct: 371 ALVFVPCMKTVKGFGMWSGR---TTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS 427
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 44.4 bits (100), Expect = 4e-04
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 17/226 (7%)
Query: 10 EPCLKKQLKGHKNAITALYYNP-NDQQIATSSLDNSVLLWDLRGTMRSYRF---QGHDEA 65
E L L HK + L +N + +A+ + D + +WDL F +G A
Sbjct: 111 ENALVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSA 170
Query: 66 VM-DVTFSSSGK----YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSV-QFSSD-GS 118
+++F S + +AS S + T IW F + SV Q++ + +
Sbjct: 171 TQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTT 230
Query: 119 KIITASDDK---VVKLWSTHKHKF-ISSFVGHTNWVRCARMS-NDGSIIASCSDDKSTKL 173
+I+ ASDD +KLW + F GH V +D S + +C+ D T
Sbjct: 231 QIMVASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTIC 290
Query: 174 WNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATS-HGNVKLYDI 218
W+ ++ E + + W+P V A+S G + +Y+I
Sbjct: 291 WDTNTAEIVAELPAGNNWNFDVHWYPKIPGVISASSFDGKIGIYNI 336
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 44.4 bits (100), Expect = 4e-04
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 17/226 (7%)
Query: 10 EPCLKKQLKGHKNAITALYYNP-NDQQIATSSLDNSVLLWDLRGTMRSYRF---QGHDEA 65
E L L HK + L +N + +A+ + D + +WDL F +G A
Sbjct: 111 ENALVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSA 170
Query: 66 VM-DVTFSSSGK----YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSV-QFSSD-GS 118
+++F S + +AS S + T IW F + SV Q++ + +
Sbjct: 171 TQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTT 230
Query: 119 KIITASDDK---VVKLWSTHKHKF-ISSFVGHTNWVRCARMS-NDGSIIASCSDDKSTKL 173
+I+ ASDD +KLW + F GH V +D S + +C+ D T
Sbjct: 231 QIMVASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTIC 290
Query: 174 WNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATS-HGNVKLYDI 218
W+ ++ E + + W+P V A+S G + +Y+I
Sbjct: 291 WDTNTAEIVAELPAGNNWNFDVHWYPKIPGVISASSFDGKIGIYNI 336
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 44.4 bits (100), Expect = 4e-04
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 240 HPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFI 299
HP ++ +G++K LDL L+GH G VNAV F+ TGD S DD+ + +
Sbjct: 27 HPITISRRISASEGRVKKLDLYG-----KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIML 81
Query: 300 W 300
W
Sbjct: 82 W 82
Score = 39.1 bits (87), Expect = 0.014
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 13/143 (9%)
Query: 99 GMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS----THKHKFISSFVGHTNWVRCAR 154
G H V +V+F+S G +++ SDD+ + LW+ + K + S + +
Sbjct: 49 GKLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIP 108
Query: 155 MSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVK 214
++D +II S +D + L++G+ + K G H H +AV NV
Sbjct: 109 FTDDRTIITSGADGQVRLGQILENGKV-----ETKRLGRH---HGRVYKLAVLPGDPNV- 159
Query: 215 LYDIRTHNLVQYYSIHNEAVTQV 237
Y VQ++ I + + T V
Sbjct: 160 FYSCGEDGFVQHFDIRSNSATMV 182
Score = 38.7 bits (86), Expect = 0.018
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 58 RFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMF--KAHSQTVRSVQF-- 113
+ GH+ V V F+S+G + S S D+ + +W ++GS + H + V +F
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLW-NWLSGSRKLSYPSGHCENVFQTKFIP 108
Query: 114 SSDGSKIITASDDKVVKLWSTHKH-KFISSFVG--HTNWVRCARMSNDGSIIASCSDD 168
+D IIT+ D V+L ++ K + +G H + A + D ++ SC +D
Sbjct: 109 FTDDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGDPNVFYSCGED 166
Score = 38.3 bits (85), Expect = 0.024
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 104 HSQTVRSVQFSSDGSKIITA-SDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSII 162
++QTV+ V F + +T+ SD + +W K + + VG V ++
Sbjct: 319 NAQTVKGVNFFGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHIPLL 378
Query: 163 ASCSDDKSTKLWNLDSGECI 182
ASC +KS KLW S + +
Sbjct: 379 ASCGIEKSVKLWTPMSNDVL 398
Score = 36.7 bits (81), Expect = 0.074
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 19 GHKNAITAL---YYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSG 75
GH+NA T ++ PND+ + + S + +W +G G V +
Sbjct: 316 GHRNAQTVKGVNFFGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHI 375
Query: 76 KYMASASRDKTVRIWVP 92
+AS +K+V++W P
Sbjct: 376 PLLASCGIEKSVKLWTP 392
Score = 33.9 bits (74), Expect = 0.52
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 16 QLKGHKNAITALYYNPNDQQIATSSLDNSVLLWD-LRGTMRSYRFQGHDEAVMDVTF 71
+L GH+ + A+ +N + + S D ++LW+ L G+ + GH E V F
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKF 106
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 44.4 bits (100), Expect = 4e-04
Identities = 31/157 (19%), Positives = 66/157 (42%), Gaps = 3/157 (1%)
Query: 21 KNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMAS 80
++A++ L ++P + +S D+ + L+D+ + S A++D F + S
Sbjct: 13 EDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQ-AALLDCCFENESTSFTS 71
Query: 81 ASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFI 140
S D +R + G+ H S+ +S + ++I+ D+ +K W T + + +
Sbjct: 72 GS-DGFIRRY-DLNAGTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRESL 129
Query: 141 SSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
V C +S + ++ + L NLD
Sbjct: 130 VFSTDAGGAVGCVTVSGNNLVVCVDASMHIYDLRNLD 166
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 44.4 bits (100), Expect = 4e-04
Identities = 31/157 (19%), Positives = 66/157 (42%), Gaps = 3/157 (1%)
Query: 21 KNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMAS 80
++A++ L ++P + +S D+ + L+D+ + S A++D F + S
Sbjct: 13 EDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQ-AALLDCCFENESTSFTS 71
Query: 81 ASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFI 140
S D +R + G+ H S+ +S + ++I+ D+ +K W T + + +
Sbjct: 72 GS-DGFIRRY-DLNAGTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRESL 129
Query: 141 SSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
V C +S + ++ + L NLD
Sbjct: 130 VFSTDAGGAVGCVTVSGNNLVVCVDASMHIYDLRNLD 166
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 44.0 bits (99), Expect = 5e-04
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
L GH A+ +LY N ++ + ++DNS+ +W L H VM + +
Sbjct: 263 LLGHTLAVVSLYVGAN--RLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWD--Q 318
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQ 106
++ S S D TV+IW T G+ + H +
Sbjct: 319 FLLSCSLDNTVKIWAATEGGNLEVTYTHKE 348
Score = 41.9 bits (94), Expect = 0.002
Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 58 RFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
+ GH + V + S + +AS+D+TVRIW TG+ + + S+G
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCII---SEG 195
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
++ + +VK W+ + + S G V + D ++ + + D S +W +
Sbjct: 196 PWLLVGMPN-LVKAWNIQNNADL-SLNGPVGQVYSLVVGTD--LLFAGTQDGSILVWRYN 251
Query: 178 S-GECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGN-VKLYDIRTHNLVQYYSIHNEAVT 235
S C L GH L + G + + N +K++ + +Q + H V
Sbjct: 252 STTSCFDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVM 311
Query: 236 QVAIHPSGSYILTASKDGKMKILDLLEG 263
+ ++L+ S D +KI EG
Sbjct: 312 SLICW--DQFLLSCSLDNTVKIWAATEG 337
Score = 37.9 bits (84), Expect = 0.032
Identities = 64/312 (20%), Positives = 121/312 (38%), Gaps = 32/312 (10%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWD-LRGTMRSYRFQGHDEAVMDVTF 71
L QL GH+ +T + ++ T+S D +V +WD G G + +
Sbjct: 136 LLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCI---- 191
Query: 72 SSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKL 131
S G ++ V+ W + Q V S+ +D + + D + +
Sbjct: 192 ISEGPWLL-VGMPNLVKAWNIQNNADLSLNGPVGQ-VYSLVVGTD--LLFAGTQDGSILV 247
Query: 132 W----STHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKD 187
W +T +S +GHT + + + + S + D S K+W+LD+ +CI T +
Sbjct: 248 WRYNSTTSCFDPAASLLGHT--LAVVSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTE 305
Query: 188 LKGHGLHL-AWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVA---IHPSG 243
+ L W ++ + VK++ ++ H E +A +H +
Sbjct: 306 HTSVVMSLICWDQ---FLLSCSLDNTVKIWAATEGGNLEVTYTHKEEYGVLALCGVHDAE 362
Query: 244 S--YILTASKDGKMKILDLLEGHPIFTLSGH---NGPVNAVNFSPTGDTFSSAGDDKL-V 297
+ +L + D + + DL P FT G + ++ P G F+ G ++ V
Sbjct: 363 AKPVLLCSCNDNSLHLYDL----PSFTERGKILAKQEIRSIQIGPGGIFFTGDGSGQVKV 418
Query: 298 FIWKTNFTDLSS 309
+ W T T + S
Sbjct: 419 WKWSTESTPILS 430
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 44.0 bits (99), Expect = 5e-04
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHG-NVKLYDI 218
+I+AS S DK K+W++ +G C T + +AW+ V ++ S V L D
Sbjct: 247 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKDG 306
Query: 219 RTHNLVQY-YSIHNEAVTQVAIHPSGSYILTAS-KDGKMKILDL-------LEGHPIFTL 269
R + + +S+ ++ V +A P + S +DG +K D+ E +P FT+
Sbjct: 307 RQPSHSGFKWSVMSD-VESLAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPSFTI 365
Query: 270 SGHNGPVNAVNFSPTGDTFSSAGD-DKLVFIWKTNFTDLSSESKEN 314
+GH+ +V+++ + + G D+ V +W + + S + N
Sbjct: 366 NGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHN 411
Score = 36.7 bits (81), Expect = 0.074
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 56 SYRFQGHDEAVMDVTFS-SSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRS---V 111
S+ GHDEA V+++ S+ +A+ S+D+TV++W H+ +
Sbjct: 362 SFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLW-DLSNNEPSCIATHNPNAGGLFFI 420
Query: 112 QFSSDGSKIITASDDK-VVKLWSTHKHKFISSFVG 145
FS D ++ +KLW T +SS G
Sbjct: 421 AFSPDNPFLLAMGGVMGELKLWDTLSDTNVSSRYG 455
Score = 31.1 bits (67), Expect = 3.7
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 17 LKGHKNAITALYYNPNDQQI-ATSSLDNSVLLWDL 50
+ GH A T++ YN + + AT S D +V LWDL
Sbjct: 365 INGHDEAATSVSYNISAPNLLATGSKDRTVKLWDL 399
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/79 (25%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 56 SYRFQGHDEAVMDVTFSSSGK-YMASASRDKTVRIWVPTVTGSTGM-FKAHSQTVRSVQF 113
+Y+ H +V+ + ++ + +ASAS DK V++W TG+ + + H++ V++V +
Sbjct: 226 NYKQGSHTRSVLGLAWNKEFRNILASASADKKVKVW-DVATGTCKITMEHHTKEVQAVAW 284
Query: 114 SSDGSKI-ITASDDKVVKL 131
+ ++ ++ S D+ V L
Sbjct: 285 NHYAPEVLLSGSFDQTVVL 303
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 44.0 bits (99), Expect = 5e-04
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 10 EPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDL 50
EP + KQL GH +T ++ N+Q IA+SSLD ++ +W+L
Sbjct: 205 EPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWEL 245
Score = 42.3 bits (95), Expect = 0.001
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 21 KNAITALYYNPNDQQI-ATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTFSSSGKYM 78
K+++T L + I A + D S+ + L + GH + V D FSS+ +Y+
Sbjct: 172 KSSVTVLKFGHMSSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYI 231
Query: 79 ASASRDKTVRIW 90
AS+S DKT+R+W
Sbjct: 232 ASSSLDKTIRVW 243
Score = 38.3 bits (85), Expect = 0.024
Identities = 32/157 (20%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 100 MFKAHSQTVRSVQFSSDGSKIIT--ASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSN 157
+F +V ++F S I+ ASD + + + GH+ V S+
Sbjct: 167 IFDQCKSSVTVLKFGHMSSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSS 226
Query: 158 DGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHP-SGCYVAVATSHGNVKLY 216
+ IAS S DK+ ++W L G CI + + +HP + +++ ++ + ++
Sbjct: 227 NNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQ-YCIRFHPVNNNFLSAGNANKELTVF 285
Query: 217 DIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDG 253
+ T +++ +E VT + +G I G
Sbjct: 286 NFSTGRIIKKLLFEDE-VTSMDHDHTGQIIFCGDGQG 321
Score = 34.7 bits (76), Expect = 0.30
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 240 HPSGSYILTASKDGKMKILDLLEGHPIFT-LSGHNGPVNAVNFSPTGDTFSSAGDDKLVF 298
H S + + DG + + LLE + L+GH+ V +FS +S+ DK +
Sbjct: 182 HMSSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIR 241
Query: 299 IWK 301
+W+
Sbjct: 242 VWE 244
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 43.6 bits (98), Expect = 6e-04
Identities = 38/182 (20%), Positives = 79/182 (43%), Gaps = 5/182 (2%)
Query: 4 DKVTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHD 63
D V PC++ + + N +A+ S D V +WD+ + H+
Sbjct: 198 DLVNEVLPCVQLGRIAGQTLFFLTFNWENRNIVASGSEDKKVKVWDVATGKCKVTMEHHE 257
Query: 64 EAVMDVTFSS-SGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGS-KII 121
+ V V +++ + + + S SRD+TV + ++G+ + V + + +
Sbjct: 258 KKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFV 317
Query: 122 TASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSND---GSIIASCSDDKSTKLWNLDS 178
+ D VK + T SF+ H + + +S + +++A+ S D+S KLW+L +
Sbjct: 318 VSLKDGTVKGFDTRASDLSPSFIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSN 377
Query: 179 GE 180
+
Sbjct: 378 NQ 379
Score = 40.3 bits (90), Expect = 0.006
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHG-NVKLYDI 218
+I+AS S+DK K+W++ +G+C T + + +AW+ V ++ S V L D
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDG 287
Query: 219 RTHNLVQYYSIHNEAVTQVAIHPSGSYILTAS-KDGKMKILDLLEG--HPIFTLSGHNGP 275
R + V ++A P + S KDG +K D P F + H+
Sbjct: 288 RDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSE 347
Query: 276 VNAVNFSPTGDTFSSAGD-DKLVFIW 300
V++++++ + G D+ V +W
Sbjct: 348 VSSISYNIHAPNLLATGSADESVKLW 373
Score = 29.9 bits (64), Expect = 8.5
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 17 LKGHKNAITALYYNPNDQQI-ATSSLDNSVLLWDLRGTMRSY 57
+ H + ++++ YN + + AT S D SV LWDL S+
Sbjct: 341 IHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSNNQPSW 382
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 43.6 bits (98), Expect = 6e-04
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 1 MMEDKVTTPEPCLKKQLKGHKNAITALYYNPNDQQ-IATSSLDNSVLLWDLRGTMRS--- 56
M+ D T P +K + K H + + +NP+D I T S DN+V ++D R +
Sbjct: 307 MLWDARTGTSPAMKVE-KAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVG 365
Query: 57 ---YRFQGHDEAVMDVTFS-SSGKYMASASRDKTVRIW 90
Y+F+GH AV+ V +S S++ D + IW
Sbjct: 366 SPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIW 403
Score = 36.3 bits (80), Expect = 0.098
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 215 LYDIRTHN--LVQYYSIHNEAVTQVAIHP-SGSYILTASKDGKMKILDLLE------GHP 265
L+D RT ++ H+ + V +P + ILT S D +++ D G P
Sbjct: 308 LWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSP 367
Query: 266 IFTLSGHNGPVNAVNFSP-TGDTFSSAGDDKLVFIWKTNFTDLSSE 310
++ GH V V +SP F S+ +D L+ IW + SE
Sbjct: 368 VYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSE 413
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 43.6 bits (98), Expect = 6e-04
Identities = 38/181 (20%), Positives = 72/181 (39%), Gaps = 13/181 (7%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA 79
H +A++ L N + + S D ++ +W L + Q HD+A+ V + +
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVA-AGFDDLLF 306
Query: 80 SASRDKTVRIWVPTVTGS------TGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
+ S D T+++W + G + V ++ + + + S D V W
Sbjct: 307 TGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDGTVNFWE 366
Query: 134 THKH-KFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD---SGECIHTYKDLK 189
K+ + GH V C ++ GS++ S DK+ +W + S C+ D
Sbjct: 367 GQKYLSHGGTLRGHRLAVLC--LAAAGSLVLSGGADKNICVWRRNGDGSHSCLSVLMDHV 424
Query: 190 G 190
G
Sbjct: 425 G 425
Score = 41.1 bits (92), Expect = 0.003
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 144 VGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGC- 202
+ H + V C ++ + ++ S S DK+ K+W L +C+ + ++ H + +G
Sbjct: 246 IRHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCL---ESIQAHDDAINTVAAGFD 302
Query: 203 -YVAVATSHGNVKLYDIR------THNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKM 255
+ ++ G +K++ H LV AVT +A++ + + + S DG
Sbjct: 303 DLLFTGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDG-- 360
Query: 256 KILDLLEGHPIF----TLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
++ EG TL GH + + + G S G DK + +W+ N
Sbjct: 361 -TVNFWEGQKYLSHGGTLRGHR--LAVLCLAAAGSLVLSGGADKNICVWRRN 409
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWD-LRGTMRSYRFQGHDEAVMDVTFSSSG 75
L +NA+TAL N + S D +V W+ + +GH AV+ +++G
Sbjct: 334 LMKQENAVTALAVNITAAVVYCGSSDGTVNFWEGQKYLSHGGTLRGHRLAVL--CLAAAG 391
Query: 76 KYMASASRDKTVRIWVPTVTGS 97
+ S DK + +W GS
Sbjct: 392 SLVLSGGADKNICVWRRNGDGS 413
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 43.2 bits (97), Expect = 9e-04
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQGHDEAVMDVTFSSSG 75
L GH + A ++P+ +T + D + +WD+R +S +G+ A+ + ++S G
Sbjct: 313 LSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIRYTSDG 372
Query: 76 KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDK----VVKL 131
KYMA A V ++ + T + + FS D + D+ +++
Sbjct: 373 KYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFSPDTEALFIGVWDRTYGSLIEY 432
Query: 132 WSTHKHKFISSFV 144
H + ++ SF+
Sbjct: 433 SRRHNYSYLDSFL 445
Score = 41.9 bits (94), Expect = 0.002
Identities = 35/170 (20%), Positives = 70/170 (41%), Gaps = 5/170 (2%)
Query: 117 GSKIITASD-DKVVKLWSTHKHKFISSFVGHTNW-VRCARMSNDGSIIASCSDDKSTKLW 174
G+ TAS+ D V+ + +++ ++ F W V +S DG ++ D+ + L
Sbjct: 245 GALHFTASNNDCGVRDFDMERYQLVNQF--RFPWPVNHTSLSPDGKLLTIVGDNPESLLV 302
Query: 175 NLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRT-HNLVQYYSIHNEA 233
+ ++G+ + T AWHP G + +++DIR V + A
Sbjct: 303 DPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGA 362
Query: 234 VTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSP 283
+ + G Y+ A + + D+ G+ G ++ ++FSP
Sbjct: 363 IRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFSP 412
Score = 40.3 bits (90), Expect = 0.006
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 199 PSGCYVAVATSHG-NVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
PSG A+++ V+ +D+ + LV + V ++ P G + + + +
Sbjct: 243 PSGALHFTASNNDCGVRDFDMERYQLVNQFRFP-WPVNHTSLSPDGKLLTIVGDNPESLL 301
Query: 258 LDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+D G + TLSGH A + P G TFS+ DK +W
Sbjct: 302 VDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVW 344
Score = 34.3 bits (75), Expect = 0.39
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 108 VRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSD 167
V S DG + D+ L + K +++ GH ++ + DG ++ +
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQ 337
Query: 168 DKSTKLWNL-DSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDI 218
DK+ ++W++ + + + + G + + G Y+A+A V +YD+
Sbjct: 338 DKTCRVWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDV 389
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 42.7 bits (96), Expect = 0.001
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 104 HSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSF-VGHTNWVRCAR---MSNDG 159
H V +V F++DG +++ SDD+ V LW SF GH N + A+ S+D
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDR 113
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYKDLKGHG-LH-LAWHPSGCY-VAVATSHGNVKLY 216
+I+ S +D + L+SG+ + T K G +H LA P + G VK +
Sbjct: 114 TIVTSAADKQVRYSKILESGQ-VETSLLGKHQGPVHKLAVEPGSPFSFYTCGEDGAVKHF 172
Query: 217 DIRT 220
D+RT
Sbjct: 173 DLRT 176
Score = 35.9 bits (79), Expect = 0.13
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 13 LKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRF-QGHDEAVMDVTF 71
L K+L HK + + +N + + + S D V+LWD + F GH + F
Sbjct: 47 LDKKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKF 106
Query: 72 S--SSGKYMASASRDKTVR 88
S + + +++ DK VR
Sbjct: 107 MPFSDDRTIVTSAADKQVR 125
Score = 34.3 bits (75), Expect = 0.39
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 269 LSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
L H G VN V+F+ GD S DD+ V +W
Sbjct: 51 LDKHKGCVNTVSFNADGDILLSGSDDRQVILW 82
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 42.7 bits (96), Expect = 0.001
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 161 IIASCSDDKSTKLWNLDSGECIHTYKDL---KGHGLHLAWHPSGCYVAVATSHGNVKLYD 217
I+A+ DD +L+ + + E + Y+ L G L + W P + +S G ++ +D
Sbjct: 167 ILAAACDDGCVRLYRISNLEKLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCWD 226
Query: 218 IRT-HNLVQYYS------IHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLS 270
+ H + + + +E + S +++ G ++ D G + S
Sbjct: 227 ATSCHEVYRITAGLGGLGSSSEICVWSLLSLRCSVLVSGDSTGTVQFWDSEHGTLLEAHS 286
Query: 271 GHNGPVNAVNFSPTGDTFSSAGDDKLVFIWK-TNFTDLSSESKENEGQ 317
H G VN + +P+ + SAG D V ++K + T+ S + K + Q
Sbjct: 287 NHKGDVNTLAAAPSHNRVFSAGADGQVILYKLSGSTNGSQDLKPSSSQ 334
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 41.9 bits (94), Expect = 0.002
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 104 HSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSF-VGHTNWVRCARMS--NDGS 160
H V +V F+++G +I+ SDD+ V LW SF GH N V A+ +D
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDR 117
Query: 161 IIASCSDDKSTKLWNLDSGECIHT-YKDL-KGHGLHLAWHPSGCYVAVATSH-GNVKLYD 217
I +C+ D + ++ G+ + T + L +G L P ++ G V+ +D
Sbjct: 118 TIVTCAADGMVRRASILEGDKVETSFLGLHQGRAHKLCIEPGNPHIFYTCGEDGLVQRFD 177
Query: 218 IRT 220
+RT
Sbjct: 178 LRT 180
Score = 36.3 bits (80), Expect = 0.098
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Query: 269 LSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEGQNMITGQ--RHL 326
L H G VN V+F+ GD S DD+ V +W ++ N+ +
Sbjct: 55 LEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFS 114
Query: 327 TEEGIDTITENGQIQDVNILSKKALDYDLRDISEG 361
+ I T +G ++ +IL ++ + +G
Sbjct: 115 DDRTIVTCAADGMVRRASILEGDKVETSFLGLHQG 149
Score = 33.5 bits (73), Expect = 0.69
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLR-GTMRSYRFQGHDEAVMDVTFS- 72
K+L+ HK + + +N + + S D V+LWD + G ++ GH V F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMP 112
Query: 73 -SSGKYMASASRDKTVR 88
S + + + + D VR
Sbjct: 113 FSDDRTIVTCAADGMVR 129
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 41.9 bits (94), Expect = 0.002
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 223 LVQYYSIHN-EAVTQVAIHPSGSYILTASKDGK-MKILDLLEGHPIFTLSGHNGPVNAVN 280
LV + N E ++ ++ P G Y+ +AS D I D+ +G G G ++ +
Sbjct: 203 LVDFLRCQNDEQISALSWSPCGRYLASASYDSSSFTIWDVSQGAGTPIRRGLGG-ISMLK 261
Query: 281 FSPTGDTFSSAGDDKLVFIWKTNFTDLSSESKENEGQNMITG 322
+SPTGD F +A D +W+TN T S + G +TG
Sbjct: 262 WSPTGDYFFAARFDGTFCLWETN-TWTSEPWSLSSGSGSVTG 302
Score = 33.1 bits (72), Expect = 0.91
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 159 GSIIASCSDDKST-KLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYD 217
G +AS S D S+ +W++ G + L G + L W P+G Y A G L++
Sbjct: 224 GRYLASASYDSSSFTIWDVSQGAGTPIRRGLGGISM-LKWSPTGDYFFAARFDGTFCLWE 282
Query: 218 IRTHNLVQY-YSIHNEAVTQVAIHPSGSYIL 247
T + S + +VT P G +IL
Sbjct: 283 TNTWTSEPWSLSSGSGSVTGAIWDPEGRFIL 313
Score = 30.7 bits (66), Expect = 4.9
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 62 HDEAVMDVTFSSSGKYMASASRD-KTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKI 120
+DE + +++S G+Y+ASAS D + IW G+ + + +++S G
Sbjct: 211 NDEQISALSWSPCGRYLASASYDSSSFTIW-DVSQGAGTPIRRGLGGISMLKWSPTGDYF 269
Query: 121 ITASDDKVVKLWSTH 135
A D LW T+
Sbjct: 270 FAARFDGTFCLWETN 284
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 41.9 bits (94), Expect = 0.002
Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 9/138 (6%)
Query: 62 HDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKII 121
H +A+ + S + + S S DKT ++W + AH V +V DG +
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDG-LVF 268
Query: 122 TASDDKVVKLWSTH------KHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWN 175
T S D VK+W KH F + + V + +++ S D + W
Sbjct: 269 TGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVNFWE 328
Query: 176 LDSGECIHTYKDLKGHGL 193
++ + LKGH L
Sbjct: 329 RENN--MKNGGVLKGHKL 344
Score = 33.9 bits (74), Expect = 0.52
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 19/145 (13%)
Query: 3 EDKVTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYR-FQG 61
ED+ + + L A+TA+ + + + S D +V W+ M++ +G
Sbjct: 282 EDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVNFWERENNMKNGGVLKG 341
Query: 62 HDEAVMDVTFSSSGKYMASASRDKTVRIW-----------VPTVTGSTGMFKAHSQTVRS 110
H AV+ + ++G M S S D +R+W + +TG G K V
Sbjct: 342 HKLAVLCLV--AAGNLMFSGSADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKC--LAVER 397
Query: 111 VQFSSDGSK---IITASDDKVVKLW 132
Q S G + + + S D+ VK+W
Sbjct: 398 DQESVSGERRWIVYSGSLDRSVKMW 422
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 41.9 bits (94), Expect = 0.002
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 13 LKKQLKGHKNA-----ITALYYNPND-QQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAV 66
LK L KN+ IT+ +N + ++I TSS+D + +WD+ + + HD+ V
Sbjct: 122 LKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEV 181
Query: 67 MDVTFSSSGKYMASASRDKTVRIW 90
D+ + G + AS S D +VR++
Sbjct: 182 YDIAWGGVGVF-ASVSEDGSVRVF 204
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 41.9 bits (94), Expect = 0.002
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 203 YVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHP-SGSYILTASKDGKMKILDLL 261
YVA G +++ D+ + + + H ++V ++ P ++TASKD +++ ++
Sbjct: 100 YVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVE 159
Query: 262 EGHPIFTLS---GHNGPVNAVNFSPTG-DTFSSAGDDKLVFIW 300
G I + GH V +V+F P+ F+S G D + IW
Sbjct: 160 TGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIW 202
Score = 40.7 bits (91), Expect = 0.005
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 116 DGSKIITASDDK-VVKLWSTHKHKFISSFVGHTNWVRCARMSN-DGSIIASCSDDKSTKL 173
+G+ + A K ++++ + S VGH + V R ++ + S D+S +L
Sbjct: 96 NGNPYVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRL 155
Query: 174 WNLDSGECIHTYKDLKGHG---LHLAWHPSGCY 203
WN+++G CI + GH L + +HPS Y
Sbjct: 156 WNVETGICILIFAGAGGHRYEVLSVDFHPSDIY 188
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 20 HKNAITALYYNP-NDQQIATSSLDNSVLLWDLRG----TMRSYRFQGHDEAVMDVTFSSS 74
H+ I ++ +NP N +ATSS D + LWDLR ++ H AV FS S
Sbjct: 347 HERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLSTVNHSRAVHSAYFSPS 406
Query: 75 GKYMASASRDKTVRI 89
G +A+ S D + +
Sbjct: 407 GLSLATTSLDNYIGV 421
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 41.1 bits (92), Expect = 0.003
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 158 DGSII-ASCSDDKSTKLWNLDSGECI-HTYKDLKGHGL-HLAWHP-SGCYVAVATSHGNV 213
+GS+I AS SDD + ++W+ +G + T + G + + + P G +AV + N
Sbjct: 178 NGSLIGASGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNA 237
Query: 214 KLYDIRTHNLVQYYSI---HNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIF-TL 269
+YDIR LV + H + VT S + I+T S DG +K D+ G + T
Sbjct: 238 YVYDIR--RLVDPLIVLDGHTKTVTYARFMDSHT-IVTGSTDGSLKQWDIDNGRRVVRTY 294
Query: 270 SGHNGPVNAVNFS--PTGDTFSSAGDDKLVFIW 300
GH N V S G S ++ VF++
Sbjct: 295 RGHVNSRNFVGLSVWRHGGLVVSGSENNQVFVY 327
Score = 39.5 bits (88), Expect = 0.010
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 22/167 (13%)
Query: 67 MDVTFSSSGKYMASASRDKTVRIWVPTVTGSTG--MFKAHSQTVRSVQFSS-DGSKIITA 123
+D T + AS S D TV++W P G+ + + SV+F GS I
Sbjct: 172 VDYTLYNGSLIGASGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVG 231
Query: 124 SDDKVVKLWSTHKHKFISSFV---GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSG- 179
D+ ++ + + + GHT V AR + +I+ S D S K W++D+G
Sbjct: 232 CADRNAYVYDIRR--LVDPLIVLDGHTKTVTYARFMDSHTIVTG-STDGSLKQWDIDNGR 288
Query: 180 ECIHTYKDLKGH-------GLHLAWHPSGCYVAVATSHGNVKLYDIR 219
+ TY +GH GL + W G V+ + + V +YD R
Sbjct: 289 RVVRTY---RGHVNSRNFVGLSV-WRHGGLVVS-GSENNQVFVYDKR 330
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 41.1 bits (92), Expect = 0.003
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 102 KAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSF-VGHTNWVRCARMSNDGS 160
+ H V ++ ++S+GS +I+ SDD + +W+ K + S GHT + C + + S
Sbjct: 47 EGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETS 106
Query: 161 --IIASCSDDKSTKLWN 175
++ S + D +L+N
Sbjct: 107 DELVVSGAGDAEVRLFN 123
Score = 35.1 bits (77), Expect = 0.23
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 18/134 (13%)
Query: 145 GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHL---AWHPSG 201
GH V +++GS++ S SDD +WN S + +H+ GH ++ + P
Sbjct: 48 GHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSID--TGHTANIFCTKFVPET 105
Query: 202 CYVAVATSHGNVKLYDIRTHNL------------VQYYSIHNEAVTQVAIHPSG-SYILT 248
V + G+ ++ T L Y H V ++A+ P + + +
Sbjct: 106 SDELVVSGAGDAEVRLFNTSRLSGRAEDDNAIIPSALYQCHTRRVKKLAVEPGNPNVVWS 165
Query: 249 ASKDGKMKILDLLE 262
AS+DG ++ D E
Sbjct: 166 ASEDGTLRQHDFRE 179
Score = 33.1 bits (72), Expect = 0.91
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 13 LKKQLKGHKNAIT----ALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMD 68
+K++ GH N T A + + IA+ S D +W+ + T R + DE+V++
Sbjct: 609 MKRRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWE-KQTGRLMKVLVGDESVLN 667
Query: 69 -VTFSSSGKYMASASRDKTVRIWVPTVT 95
+ +A++ D T++IW PT +
Sbjct: 668 CIQCHPFDSVVATSGIDNTIKIWSPTAS 695
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 243 GSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
G YI + S DG+ I + G + L G +N + P +++G D + IW
Sbjct: 633 GEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIW 690
Score = 32.3 bits (70), Expect = 1.6
Identities = 24/130 (18%), Positives = 52/130 (40%), Gaps = 4/130 (3%)
Query: 50 LRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVR 109
+RG++ + D+ M+ T ++ AS+S++ + H
Sbjct: 562 MRGSLNLRIHRVGDDKPMENTVDNASSGTASSSQNDRTSYQPEGAIDMKRRYVGHCNVGT 621
Query: 110 SVQFSS----DGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASC 165
++ +S G I + SDD +W + + VG + + C + S++A+
Sbjct: 622 DIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATS 681
Query: 166 SDDKSTKLWN 175
D + K+W+
Sbjct: 682 GIDNTIKIWS 691
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 14 KKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQ-GHDEAVMDVTF- 71
+++L+GH+ + AL +N N + + S D + +W+ + GH + F
Sbjct: 43 EQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFV 102
Query: 72 -SSSGKYMASASRDKTVRIW 90
+S + + S + D VR++
Sbjct: 103 PETSDELVVSGAGDAEVRLF 122
Score = 30.7 bits (66), Expect = 4.9
Identities = 18/78 (23%), Positives = 31/78 (39%)
Query: 201 GCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDL 260
G Y+A + G +++ +T L++ + + HP S + T+ D +KI
Sbjct: 633 GEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWSP 692
Query: 261 LEGHPIFTLSGHNGPVNA 278
P G GP A
Sbjct: 693 TASVPSIVAGGSAGPATA 710
Score = 30.3 bits (65), Expect = 6.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 269 LSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
L GH G VNA+ ++ G S DD + IW
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIW 77
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 41.1 bits (92), Expect = 0.003
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 114 SSDGSKIITASDDKVVKLWSTHKH--------KFISSFVGHTNWVRCARMSNDGSIIASC 165
S DG ++T ++D +V +W K + S HT V C R+S +IAS
Sbjct: 3283 SHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIASS 3342
Query: 166 SDDKSTKLWNLDS 178
SDD + +W+L S
Sbjct: 3343 SDDCTVIIWDLSS 3355
Score = 35.5 bits (78), Expect = 0.17
Identities = 38/174 (21%), Positives = 79/174 (45%), Gaps = 13/174 (7%)
Query: 126 DKVVKLWSTHKHKFISSF--VGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD-----S 178
D+ ++ S + K +S+ + N ++CA +S+DG I+ + ++D +W +
Sbjct: 3251 DRTLRFMSYDQDKLLSTHENLHEGNQIQCAGVSHDGRIVVTGAEDGLVSVWRVSKDGPRG 3310
Query: 179 GECIHTYKDLKGHGLH-LAWHPSGCYVAVATSHGN--VKLYDIRTHNLVQYYSIHNEAVT 235
+ K L H + S Y+ +A+S + V ++D+ + + V+ + VT
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVT 3370
Query: 236 QVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFS 289
V I+ I+TA+ G + + + G + ++ P + + S G TFS
Sbjct: 3371 VVYINDLTGEIVTAA--GSVLAVWSINGDCLSVVNTSQLPTDLI-VSVAGSTFS 3421
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 40.7 bits (91), Expect = 0.005
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 102 KAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTN 148
+ H++TV V+F DG ++TA D +KLWS + I ++ GH N
Sbjct: 110 QGHTKTVSYVRFL-DGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVN 155
Score = 36.3 bits (80), Expect = 0.098
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 8/115 (6%)
Query: 79 ASASRDKTVRIWVPTVTG--STGMFKAHS---QTVRSVQFS-SDGSKIITASDDKVVKLW 132
AS S D T+++W P S G+ + V V+F S G + D+ ++
Sbjct: 38 ASGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVY 97
Query: 133 STHKHKFIS-SFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYK 186
K + + GHT V R DG + + D KLW+++ G I TY+
Sbjct: 98 DIRKLVDPALTLQGHTKTVSYVRFL-DGGTVVTAGTDGCLKLWSVEDGRVIRTYE 151
Score = 34.3 bits (75), Expect = 0.39
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 11/166 (6%)
Query: 145 GHTNW-VRCARMSNDGSIIASCSDDKSTKLWNL-----DSGECIHTYKDLKGHGLHLAWH 198
G W V R ++ AS SDD + ++W+ +S + + + +
Sbjct: 19 GRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFD 78
Query: 199 PSGC-YVAVATSHGNVKLYDIRTH-NLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMK 256
PSG VAV + +YDIR + H + V+ V G+ ++TA DG +K
Sbjct: 79 PSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSYVRFLDGGT-VVTAGTDGCLK 137
Query: 257 ILDLLEGHPIFTLSGHNGPVNAVNFS--PTGDTFSSAGDDKLVFIW 300
+ + +G I T GH N V S G F ++ VF++
Sbjct: 138 LWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVY 183
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 40.7 bits (91), Expect = 0.005
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 161 IIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRT 220
++AS + ++ G + + + KG + +P V + S G V ++ +
Sbjct: 211 LLASVNMSGQLHYQDVTHGGMVASIRTGKGRTDVMEVNPYNSVVGLGHSGGTVTMWKPTS 270
Query: 221 HNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVN 280
+ H V+ VA HP+G + T+ K+ K+KI DL + + T+ H+ ++
Sbjct: 271 QAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI--HSFHAKTLS 328
Query: 281 FSPTG 285
FS G
Sbjct: 329 FSQKG 333
Score = 37.1 bits (82), Expect = 0.056
Identities = 26/137 (18%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Query: 164 SCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNL 223
+ + K ++ D E +H K+ +G L + + +A G + D+ +
Sbjct: 174 AAAQKKYAYIYGRDGTE-LHCLKE-RGPVARLRFLKNHFLLASVNMSGQLHYQDVTHGGM 231
Query: 224 VQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSP 283
V + ++P S + G + + P+ + H GPV++V F P
Sbjct: 232 VASIRTGKGRTDVMEVNPYNSVVGLGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHP 291
Query: 284 TGDTFSSAGDDKLVFIW 300
G +++G ++ + IW
Sbjct: 292 NGHLMATSGKERKIKIW 308
Score = 33.9 bits (74), Expect = 0.52
Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Query: 21 KNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMAS 80
K + NP + + +V +W + Q H V V F +G MA+
Sbjct: 239 KGRTDVMEVNPYNSVVGLGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMAT 298
Query: 81 ASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
+ +++ ++IW + + HS +++ FS G
Sbjct: 299 SGKERKIKIW--DLRKFEEVQTIHSFHAKTLSFSQKG 333
Score = 33.5 bits (73), Expect = 0.69
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 5 KVTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLR 51
K T+ P + Q++ H ++++ ++PN +ATS + + +WDLR
Sbjct: 267 KPTSQAPLV--QMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLR 311
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 40.3 bits (90), Expect = 0.006
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 104 HSQTVRS-VQFSSDGSKIITASDDKVVKLWSTHKHKFISSFV--GHTNWVRCARMSNDGS 160
H + S + + D IT S D +K+W T+ + + F G + M+ +
Sbjct: 102 HKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHT 161
Query: 161 IIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVA-VATSHGNVKLYDIR 219
+IA+ ++D +L ++ SG HT + + + W S +V G ++ +DIR
Sbjct: 162 LIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIR 221
Query: 220 THNLVQYYSIHNEAVTQVAIHP 241
+ + +++ TQ+ P
Sbjct: 222 RAGC---FRVLDQSQTQLGFRP 240
Score = 39.5 bits (88), Expect = 0.010
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMD 68
L+GH ++ +N NDQ++ TS D +L+W GT+ Q DE D
Sbjct: 395 LRGHYESVNTCCFNSNDQELYTSGSDRQILVWSPGGTVEDEMVQ--DEVAED 444
Score = 37.9 bits (84), Expect = 0.032
Identities = 61/283 (21%), Positives = 108/283 (38%), Gaps = 27/283 (9%)
Query: 36 IATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMA-SASRDKTVRIWVPTV 94
IA + D V L D+ S+ GH + VM V +S+S +++ + D +R W
Sbjct: 163 IAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWD--- 219
Query: 95 TGSTGMFKAHSQTVRSVQF-------SSDGSKIITASDDKVVKLWSTHKHKFISSFVGHT 147
G F+ Q+ + F ++ GSK+ + + L ++ K + S
Sbjct: 220 IRRAGCFRVLDQSQTQLGFRPPILKRTAVGSKLSSVAKSS---LGGQNRLKTLQS----- 271
Query: 148 NWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGL--HLAWHPSGCYVA 205
+ S GS A S +KS + + G + +G L G Y+
Sbjct: 272 --KQTGSQSVKGSSSAKASVEKSRQK-RIHPGMLSTLDRATAHYGAVTGLKATNDGMYLL 328
Query: 206 VATSHGNVKLYDIRT--HNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGK-MKILDLLE 262
A S ++L+DI + + LV + + + + + S L K +K +
Sbjct: 329 SAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLDTSDDPALVFVPCMKTVKAFGMWS 388
Query: 263 GHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFT 305
G L GH VN F+ ++G D+ + +W T
Sbjct: 389 GRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWSPGGT 431
Score = 37.9 bits (84), Expect = 0.032
Identities = 25/120 (20%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 20 HKNAITALYYNPNDQQIATSSLDNSVLLWDL---RGTMRSY---RFQGHDEAVMDVTFSS 73
H A+T L + + ++ D+ + LWD+ R T+ ++ R Q + +D +
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLDTSDDP 370
Query: 74 SGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWS 133
+ ++ K +W +T M + H ++V + F+S+ ++ T+ D+ + +WS
Sbjct: 371 ALVFVPCMKTVKAFGMWSGR---TTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWS 427
Score = 35.5 bits (78), Expect = 0.17
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 16/169 (9%)
Query: 17 LKGHKNAITALYYNPNDQQIA-TSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSG 75
L GH++ + ++ ++ + + + T D ++ WD+R R+ F+ D++ + F
Sbjct: 186 LSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIR---RAGCFRVLDQSQTQLGFRPPI 242
Query: 76 -KYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
K A S+ +V + G K T++S Q S K +++ V K
Sbjct: 243 LKRTAVGSKLSSV---AKSSLGGQNRLK----TLQSKQTGSQSVKGSSSAKASVEKSRQK 295
Query: 135 HKHKFISSFV----GHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSG 179
H + S + H V + +NDG + S D +LW+++SG
Sbjct: 296 RIHPGMLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESG 344
Score = 34.7 bits (76), Expect = 0.30
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 197 WHP--SGCYVAVATSHGNVKLYDIRTHNLVQYYS----IHNEAVTQVAIHPSGSYILTAS 250
W+P +G ++ + H +K++D T V + ++ A++ +A+ S + I +
Sbjct: 111 WYPIDTGLFITGSFDH-YLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAM--SHTLIAAGT 167
Query: 251 KDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGD-TFSSAGDDKLVFIW 300
+D ++++ D+ G TLSGH V +V +S + + + G D + W
Sbjct: 168 EDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFW 218
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 39.9 bits (89), Expect = 0.008
Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 11/208 (5%)
Query: 58 RFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDG 117
+ GH++ V + S + + S+D+T+R+W TG+ K + + V S+G
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGE-IGCV--LSEG 202
Query: 118 SKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
++ + +VK W+ + S G V + D ++ + + D S W +
Sbjct: 203 PWLLVGMPN-LVKAWNIETNA-DQSLSGPVGQVYSLVVGTD--LLFAGTQDGSILAWRYN 258
Query: 178 SG-ECIHTYKDLKGHGLHLAWHPSGCYVAVATS-HGNVKLYDIRTHNLVQYYSIHNEAVT 235
+ C L GH L + G + S +K++ + +Q + H+ V
Sbjct: 259 AATNCFEPSASLTGHTLAVVTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVM 318
Query: 236 QVAIHPSGSYILTASKDGKMKILDLLEG 263
+ ++L+ S D +KI +EG
Sbjct: 319 SLICW--DQFLLSCSLDNTVKIWAAIEG 344
Score = 39.9 bits (89), Expect = 0.008
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
L GH A+ LY N ++ + S+D ++ +W L H VM + +
Sbjct: 270 LTGHTLAVVTLYVGAN--RLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWD--Q 325
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQ 106
++ S S D TV+IW G+ + H +
Sbjct: 326 FLLSCSLDNTVKIWAAIEGGNLEVTYTHKE 355
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 39.9 bits (89), Expect = 0.008
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 13 LKKQLKGHKNA-----ITALYYNPND-QQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAV 66
LK L +KN+ +T+ +N + ++I TSS D + +WD+ + HD+ V
Sbjct: 122 LKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEV 181
Query: 67 MDVTFSSSGKYMASASRDKTVRIW 90
D+ + G + AS S D +VR++
Sbjct: 182 FDIAWGGVGVF-ASVSADGSVRVF 204
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 39.9 bits (89), Expect = 0.008
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 105 SQTVRSVQFSSDGSKIITASDDKVVKLWSTHKH--------KFISSFVGHTNWVRCARMS 156
S ++ S DG ++T ++D +V +W K + + HT V C R+S
Sbjct: 3330 SNQIQCAGVSHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVS 3389
Query: 157 NDGSIIASCSDDKSTKLWNLDS 178
+IAS SDD + +W+L S
Sbjct: 3390 QPYMMIASGSDDCTVIIWDLSS 3411
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 39.1 bits (87), Expect = 0.014
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 138 KFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKG 190
K+++S GH+ V C + G ++ S S DK+ K+W+L++ +CI T K G
Sbjct: 249 KYLTSLEGHSGEVTCFAVG--GQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTG 299
Score = 35.5 bits (78), Expect = 0.17
Identities = 39/184 (21%), Positives = 77/184 (41%), Gaps = 15/184 (8%)
Query: 140 ISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHP 199
++S GH ++ + + S S D + ++W+ +SG+C+H+ +L L
Sbjct: 124 VASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSI-NLDAEAGSLI--S 180
Query: 200 SGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQV-AIHPSGSYILTASKDGKM--- 255
G +V + + +K ++++T + + V QV A+ + + + G +
Sbjct: 181 EGPWVFLGLPNA-IKAFNVQTSQDLHLQAA--GVVGQVNAMTIANGMLFAGTSSGSILVW 237
Query: 256 KILDLLEGHP---IFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSSESK 312
K E P + +L GH+G V F+ G S DK + +W N K
Sbjct: 238 KATTDSESDPFKYLTSLEGHSGEVTC--FAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLK 295
Query: 313 ENEG 316
++ G
Sbjct: 296 QHTG 299
Score = 35.1 bits (77), Expect = 0.23
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Query: 17 LKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGK 76
L+GH +T + Q + + S+D ++ +WDL + H V + K
Sbjct: 254 LEGHSGEVTC--FAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTV--TSLLCWDK 309
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSV 111
+ S+S D T+++W + G + + Q SV
Sbjct: 310 CLISSSLDGTIKVWAYSENGILKVVQTRRQEQSSV 344
Score = 32.7 bits (71), Expect = 1.2
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 60 QGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK 119
+GH V F+ G+ + S S DKT+++W K H+ TV S+
Sbjct: 255 EGHSGEV--TCFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWD--KC 310
Query: 120 IITASDDKVVKLWS 133
+I++S D +K+W+
Sbjct: 311 LISSSLDGTIKVWA 324
Score = 32.3 bits (70), Expect = 1.6
Identities = 44/208 (21%), Positives = 87/208 (41%), Gaps = 23/208 (11%)
Query: 73 SSGKYMASASRDKTVRIWVPTVTGSTGMFK------AHSQTVRSVQFSSDGSKIITASDD 126
++G A S ++ +W T + FK HS V F+ G + + S D
Sbjct: 221 ANGMLFAGTSSG-SILVWKATTDSESDPFKYLTSLEGHSGEVTC--FAVGGQMLYSGSVD 277
Query: 127 KVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSG---ECIH 183
K +K+W + + I + HT V + + D +I+S S D + K+W + +
Sbjct: 278 KTIKMWDLNTLQCIMTLKQHTGTV-TSLLCWDKCLISS-SLDGTIKVWAYSENGILKVVQ 335
Query: 184 TYKDLKG--HGLHLAWHPSGCYVAVATSH--GNVKLYDIRT-HNLVQYYSIHNEAVTQVA 238
T + + H L H + + S+ G V ++D+ + + +S H + +
Sbjct: 336 TRRQEQSSVHALS-GMHDAEAKPIIFCSYQNGTVGIFDLPSFQERGRMFSTH--TIATLT 392
Query: 239 IHPSGSYILTASKDGKMKILDLLEGHPI 266
I P G + + + G +++ L G+ +
Sbjct: 393 IGPQG-LLFSGDESGNLRVWTLAAGNKV 419
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 38.7 bits (86), Expect = 0.018
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 156 SNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGH--GLHLAWHPSGCYVAVATSHGNV 213
S+ + I + S D+++ +W+L+ E + T L+ + L + W P AV + V
Sbjct: 64 SSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 123
Query: 214 KLYDIRTHNLVQYYSI----HNEAVTQVAIHPSGSYILTASKDGKMKI 257
+ N + H +VT VA HP+ + T S DGK ++
Sbjct: 124 CICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRV 171
Score = 33.5 bits (73), Expect = 0.69
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Query: 100 MFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFV--GHTNWVRCARMSN 157
+ + H Q V + +SS +KI+T S D+ +WS +++ + V C + S
Sbjct: 50 VLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSP 109
Query: 158 DGSIIASCSDDKSTKLWNLDSGECIHTYKDL-KGHG---LHLAWHPSGCYVAVATSHGNV 213
+ A S K+ + + K + K H +AWHP+ +A ++ G
Sbjct: 110 KENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKC 169
Query: 214 KLY 216
+++
Sbjct: 170 RVF 172
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 38.7 bits (86), Expect = 0.018
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 156 SNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGH--GLHLAWHPSGCYVAVATSHGNV 213
S+ + I + S D+++ +W+L+ E + T L+ + L + W P AV + V
Sbjct: 64 SSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 123
Query: 214 KLYDIRTHNLVQYYSI----HNEAVTQVAIHPSGSYILTASKDGKMKI 257
+ N + H +VT VA HP+ + T S DGK ++
Sbjct: 124 CICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRV 171
Score = 33.5 bits (73), Expect = 0.69
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Query: 100 MFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFV--GHTNWVRCARMSN 157
+ + H Q V + +SS +KI+T S D+ +WS +++ + V C + S
Sbjct: 50 VLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSP 109
Query: 158 DGSIIASCSDDKSTKLWNLDSGECIHTYKDL-KGHG---LHLAWHPSGCYVAVATSHGNV 213
+ A S K+ + + K + K H +AWHP+ +A ++ G
Sbjct: 110 KENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKC 169
Query: 214 KLY 216
+++
Sbjct: 170 RVF 172
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 38.7 bits (86), Expect = 0.018
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 156 SNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGH--GLHLAWHPSGCYVAVATSHGNV 213
S+ + I + S D+++ +W+L+ E + T L+ + L + W P AV + V
Sbjct: 64 SSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 123
Query: 214 KLYDIRTHNLVQYYSI----HNEAVTQVAIHPSGSYILTASKDGKMKI 257
+ N + H +VT VA HP+ + T S DGK ++
Sbjct: 124 CICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRV 171
Score = 33.5 bits (73), Expect = 0.69
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Query: 100 MFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFV--GHTNWVRCARMSN 157
+ + H Q V + +SS +KI+T S D+ +WS +++ + V C + S
Sbjct: 50 VLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSP 109
Query: 158 DGSIIASCSDDKSTKLWNLDSGECIHTYKDL-KGHG---LHLAWHPSGCYVAVATSHGNV 213
+ A S K+ + + K + K H +AWHP+ +A ++ G
Sbjct: 110 KENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKC 169
Query: 214 KLY 216
+++
Sbjct: 170 RVF 172
>At2g13370.1 68415.m01476 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to SP|O14647
Chromodomain-helicase-DNA-binding protein 2 (CHD-2)
{Homo sapiens}; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00385: 'chromo' (CHRromatin
Organization MOdifier)
Length = 1722
Score = 38.7 bits (86), Expect = 0.018
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 8/132 (6%)
Query: 691 HYSNDNLYSSYREDRKYQSQNEKPPRFQKIQEEMNKHHQNM-NMPYNNTYQQNQYKDRHM 749
++S DN +S+ R + K S+NE ++ EMNKH ++P + Y+
Sbjct: 128 YHSEDN-HSNDRSE-KLDSENENDNENEEEDNEMNKHQSGQADVPADEMLSDEYYE---- 181
Query: 750 RNDRNPNDRGPQQNYNHNSSTMDGLVDATSKLNLLSNQSRIDEQQVHNYQQHTDQSYQSK 809
+++ N +D + Y+ N + L A S ++ S SR + +H + D + +
Sbjct: 182 QDEDNQSDHVHYKGYS-NPTNSRSLPKAGSAVHSNSRTSRAIHKNIHYSDSNHDHNGDAD 240
Query: 810 QTYPSNHSQDIP 821
Y +D P
Sbjct: 241 MDYEEEEDEDDP 252
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 38.3 bits (85), Expect = 0.024
Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 12/171 (7%)
Query: 158 DGSIIASCSDDKSTKLWNLDSGECIHTYKDLK---GHGLHLAWHPSGCYVAVATSHGNVK 214
D + A+C DD +++ + + + Y+ L G L + W + +S G ++
Sbjct: 165 DRHLAAAC-DDGCVRIYYISESDKLTYYRSLPRVTGRALSVTWSADAQRIFSGSSDGLIR 223
Query: 215 LYDIRTHNLVQYYSIH-------NEAVTQVAIHPSGSYILTASKDGKMKILDLLEGHPIF 267
+D + V ++ +E + +++ G ++ D G +
Sbjct: 224 CWDANLCHEVYRITVGLGGLGNGSELCIWSLLSLRYGVLVSGDSTGSVQFWDSQHGTLLQ 283
Query: 268 TLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWK-TNFTDLSSESKENEGQ 317
S H G VNA+ SP+ + SAG D V ++K + T S + K + Q
Sbjct: 284 AHSNHKGDVNALAASPSHNRVFSAGADGQVILYKLSGGTSRSQDFKPSSAQ 334
Score = 36.3 bits (80), Expect = 0.098
Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 10/162 (6%)
Query: 67 MDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVR---SVQFSSDGSKIITA 123
+D + +++A+A D VRI+ + + +++ + SV +S+D +I +
Sbjct: 157 LDEKVEALDRHLAAACDDGCVRIYYISESDKLTYYRSLPRVTGRALSVTWSADAQRIFSG 216
Query: 124 SDDKVVKLWSTHK-HKFISSFVG------HTNWVRCARMSNDGSIIASCSDDKSTKLWNL 176
S D +++ W + H+ VG + + +S ++ S S + W+
Sbjct: 217 SSDGLIRCWDANLCHEVYRITVGLGGLGNGSELCIWSLLSLRYGVLVSGDSTGSVQFWDS 276
Query: 177 DSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHGNVKLYDI 218
G + + + KG LA PS V A + G V LY +
Sbjct: 277 QHGTLLQAHSNHKGDVNALAASPSHNRVFSAGADGQVILYKL 318
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 37.9 bits (84), Expect = 0.032
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 26/183 (14%)
Query: 104 HSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHK----FISSFVGHTNWVR--CARMSN 157
H V + SSD S ++ASDD VK+W + K + F S H R C M
Sbjct: 1080 HRSAVNDIATSSDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRGMCTTMLR 1139
Query: 158 DGSIIASCSDDKSTKLWNLDS-----GECIHTY--------KDLKGHGL-----HLAWHP 199
+ + + + D ++++D G + Y KD+K L + A
Sbjct: 1140 NSTQVVVGASDGVIHMFSIDHISRGLGNVVEKYSGIVDIKKKDVKEGALVSLLNYTADSL 1199
Query: 200 SGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEA--VTQVAIHPSGSYILTASKDGKMKI 257
SG V +T + + L+D R+ + E V+ + P G++ ++ S G + +
Sbjct: 1200 SGPMVMYSTQNCGIHLWDTRSDLDAWTLKANPEEGYVSSLVTSPCGNWFVSGSSRGVLTL 1259
Query: 258 LDL 260
DL
Sbjct: 1260 WDL 1262
Score = 36.7 bits (81), Expect = 0.074
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 48 WDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIW 90
W RG + ++ Q H AV D+ SS + SAS D TV++W
Sbjct: 1067 WKPRGVLVAH-LQEHRSAVNDIATSSDHSFFVSASDDSTVKVW 1108
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 37.5 bits (83), Expect = 0.042
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 20 HKNAITALYYNP-NDQQIATSSLDNSVLLWDLRGTMRS-YRFQGHDEAVMDVTFSSSGK- 76
H + L +NP N+ +AT S D +V L+DLR + + F H E V V ++ +
Sbjct: 272 HSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNET 331
Query: 77 YMASASRDKTVRIW 90
+AS + + +W
Sbjct: 332 ILASCCLGRRLMVW 345
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 36.7 bits (81), Expect = 0.074
Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 23/187 (12%)
Query: 140 ISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHP 199
+++ GH N ++ + + S S D + +W+ +SG+C+ + +L+ L
Sbjct: 180 VAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSI-NLQAEAGSLI--S 236
Query: 200 SGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIH-------PSGSYIL---TA 249
G +V + + VK ++++ V + + A + SGS ++ T
Sbjct: 237 EGPWVFLGLPNA-VKAFNVQNSKDVHLEGVVGQVHAMTAANGMLFAGTSSGSILVWKATD 295
Query: 250 SKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTNFTDLSS 309
S+ K L LEGH H+G V F G+ S DK + +W N
Sbjct: 296 SESDPFKYLTSLEGH-------HSGEVTC--FVVGGEVLYSGSVDKTIKVWDLNTLQCRM 346
Query: 310 ESKENEG 316
K++ G
Sbjct: 347 TLKQHIG 353
Score = 32.3 bits (70), Expect = 1.6
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 60 QGHDEAVMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSK 119
+GH + F G+ + S S DKT+++W K H TV S+
Sbjct: 308 EGHHSGEV-TCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWD--KC 364
Query: 120 IITASDDKVVKLWSTHKHK 138
+I++S D +KLW+ +++
Sbjct: 365 LISSSLDGTIKLWACSENE 383
>At3g50590.1 68416.m05533 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); some
similarity to s-tomosyn isoform (GI:4689231)[Rattus
norvegicus]; contains non-consensus AT-AC splice sites
at intron 18
Length = 1606
Score = 36.7 bits (81), Expect = 0.074
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 187 DLKGHGLHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNE----AVTQVAIHPS 242
DLK +++A HP + VA + G ++ Y+I T+ + + N + A HP+
Sbjct: 154 DLKKPIVNIACHPRLPVLYVAYAEGLIRAYNIHTYAVHYTLQLDNTIKLIGASSFAFHPT 213
Query: 243 GSYILTASKDGKMKILDLLEGHP--IFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIW 300
+I + G + D+ P I + P+ ++++ P + D + +W
Sbjct: 214 LEWIFVGDRRGTLLAWDVSTERPNMIGITQVGSQPITSISWLPMLRVLVTVSKDGSLQVW 273
Query: 301 KT 302
KT
Sbjct: 274 KT 275
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 36.7 bits (81), Expect = 0.074
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 14 KKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRS--YRFQGHDEAVMDVTF 71
K+ + A+TAL Y+ + + D S+ +W++ + + + + H V +
Sbjct: 846 KEMHQSGSGAVTALIYHKG--LLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSL 903
Query: 72 SSSGKYMASASRDKTVRIW 90
S +G+ + S S DKT+R+W
Sbjct: 904 SETGECVLSGSADKTIRVW 922
Score = 33.1 bits (72), Expect = 0.91
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 80 SASRDKTVRIWVPTVTGSTGMF--KAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKH 137
S D ++R+W +T ++ K H TV S G +++ S DK +++W K
Sbjct: 868 SGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIVKG 927
Query: 138 K 138
K
Sbjct: 928 K 928
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 120 IITASDDKVVKLWSTHKH--KFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLD 177
+ + D +++W+ +K + H + V C +S G + S S DK+ ++W +
Sbjct: 866 LFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIV 925
Query: 178 SG--ECIHTYK 186
G EC K
Sbjct: 926 KGKLECAEVIK 936
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 36.3 bits (80), Expect = 0.098
Identities = 41/201 (20%), Positives = 82/201 (40%), Gaps = 11/201 (5%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQG---HDEAVMDVTFSSSGKYMAS 80
I +++++ N Q + T+ LD + + + G R+ + Q D + F +G +
Sbjct: 247 INSVHFHQNAQLLLTAGLDRRLRFFQIDGK-RNTKIQSIFLEDCPIRKAAFLPNGSQVIV 305
Query: 81 ASRDK---TVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKH 137
+ R K + + + +++ + S D + I ++ + L ST
Sbjct: 306 SGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLVSTKTK 365
Query: 138 KFISSFVGHTNWVRCARMSNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGH--GLHL 195
+ I + + + VR S DG + S D +W+L + +C++ D +G G L
Sbjct: 366 ELIGTLKMNGS-VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVD-EGSTCGTSL 423
Query: 196 AWHPSGCYVAVATSHGNVKLY 216
+G A T G V +Y
Sbjct: 424 CSSLNGALFASGTDRGIVNIY 444
>At4g30510.2 68417.m04332 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); similar to several hypothetical
proteins
Length = 261
Score = 36.3 bits (80), Expect = 0.098
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 196 AWHPS--GCYVAV--ATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASK 251
A+ PS GCY+AV +T+ G+V +Y++ H + +A+ +G YI T S+
Sbjct: 100 AFSPSLEGCYLAVPASTTKGSVLVYNVMDLQSHSEIDAHRSPLAAIALSSNGMYIATGSE 159
Query: 252 DGKM 255
G +
Sbjct: 160 QGTL 163
>At4g30510.1 68417.m04331 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); similar to several hypothetical
proteins
Length = 312
Score = 36.3 bits (80), Expect = 0.098
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 196 AWHPS--GCYVAV--ATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASK 251
A+ PS GCY+AV +T+ G+V +Y++ H + +A+ +G YI T S+
Sbjct: 87 AFSPSLEGCYLAVPASTTKGSVLVYNVMDLQSHSEIDAHRSPLAAIALSSNGMYIATGSE 146
Query: 252 DGKM 255
G +
Sbjct: 147 QGTL 150
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 36.3 bits (80), Expect = 0.098
Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 20/242 (8%)
Query: 37 ATSSLDNSVLLWD-----LRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWV 91
ATS+ D+ + LWD LR T R+Y A V F+ G + A + ++R++
Sbjct: 132 ATSTRDHPIHLWDSTSGELRCTYRAYDAMDEITAAFSVGFNPDGTKIF-AGYNSSIRVFD 190
Query: 92 PTVTG------STGMFKAHSQT--VRSVQFSSDGSKIITA-SDDKVVKLWSTHKHKFISS 142
G ST Q + ++ FS S ++ S + ++ + +
Sbjct: 191 LHRPGRDFRQYSTLQKNKEGQAGILSTLAFSPTNSGMLAVGSYGQTTGIYREDNMELLYV 250
Query: 143 FVGHTNWVRCARMSNDGSIIASCS-DDKSTKLWNL-DSGECIHT-YKDLKGHGLHLAW-- 197
G V + S DG+ + + D W++ S E ++ Y+ + + +
Sbjct: 251 LHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDIRKSVEIVYKLYRATENTNQRVFFDI 310
Query: 198 HPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMKI 257
P G ++ G V +YD++T N V Y ++ V + HP T+S + I
Sbjct: 311 EPCGRHLGTGGQDGLVHMYDLQTGNWVSGYQAASDTVNAFSFHPYLPMAATSSGHRRFAI 370
Query: 258 LD 259
D
Sbjct: 371 PD 372
Score = 35.1 bits (77), Expect = 0.23
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 20/224 (8%)
Query: 79 ASASRDKTVRIWVPTVTGSTGMFKAHSQ-----TVRSVQFSSDGSKIITASDDKVVKLWS 133
A+++RD + +W T ++A+ SV F+ DG+KI A + ++++
Sbjct: 132 ATSTRDHPIHLWDSTSGELRCTYRAYDAMDEITAAFSVGFNPDGTKIF-AGYNSSIRVFD 190
Query: 134 THK--------HKFISSFVGHTNWVRCARMSNDGS-IIASCSDDKSTKLWNLDSGECIHT 184
H+ + G + S S ++A S ++T ++ D+ E ++
Sbjct: 191 LHRPGRDFRQYSTLQKNKEGQAGILSTLAFSPTNSGMLAVGSYGQTTGIYREDNMELLYV 250
Query: 185 YKDLKGHGLHLAWHPSGCYVAVA-TSHGNVKLYDIRTHNLVQY--YSIHNEAVTQVA--I 239
+G H+ + G Y+ + +DIR + Y Y +V I
Sbjct: 251 LHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDIRKSVEIVYKLYRATENTNQRVFFDI 310
Query: 240 HPSGSYILTASKDGKMKILDLLEGHPIFTLSGHNGPVNAVNFSP 283
P G ++ T +DG + + DL G+ + + VNA +F P
Sbjct: 311 EPCGRHLGTGGQDGLVHMYDLQTGNWVSGYQAASDTVNAFSFHP 354
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 36.3 bits (80), Expect = 0.098
Identities = 34/180 (18%), Positives = 74/180 (41%), Gaps = 20/180 (11%)
Query: 19 GHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYM 78
GH +++L + ++ + S D ++ +W+ GH ++ + + + +
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSID-ALGRERV 319
Query: 79 ASASRDKTVRIWVP--TVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHK 136
S RD+T++++ V ST + S++ + + ++ SD+ + LWS K
Sbjct: 320 LSVGRDRTMQLYKVGIVVPESTRLIYRASESNFECCCFVNSDEFLSGSDNGSIALWSILK 379
Query: 137 HK--FISSFVGHT---------------NWVRCARMSNDGSIIASCSDDKSTKLWNLDSG 179
K FI + H +WV + + AS + + +LW ++SG
Sbjct: 380 KKPVFIVNNAHHVIADHDSVNHNCTPACSWVSSVAVCRGSELAASGAGNGCVRLWGVESG 439
Score = 31.1 bits (67), Expect = 3.7
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 25/150 (16%)
Query: 105 SQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIAS 164
++T+ Q G ++ A+ +V L S+ K + I V H + V +S+D S S
Sbjct: 107 AKTLMQEQLEKSG-RVRRANALRVQDLQSSDKFRVI---VKHQHSVTGVALSDDDSRGFS 162
Query: 165 CSDDKSTKLWNLDSGECIHTYK-----DLKGHGLHL--AWH-------------PSGCYV 204
S D + W++ SG+ YK LK HGL +W+ G Y+
Sbjct: 163 VSKDGTILHWDVSSGKS-DEYKWPSDEVLKSHGLKFQESWYTRHNKQSLALAVSSDGRYL 221
Query: 205 AVATSHGNVKLYDIRTHNLVQYYSIHNEAV 234
A +V L+DIRT VQ + N V
Sbjct: 222 ATGGVDCHVHLWDIRTREHVQVNKLKNNQV 251
>At1g25540.1 68414.m03171 phytochrome and flowering time regulatory
protein (PFT1) PMID: 12815435
Length = 836
Score = 36.3 bits (80), Expect = 0.098
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 784 LSNQSRIDEQQVHNYQQHTDQSYQSKQTYPSNHSQDIPPFRRSNDLHQDGYQRRQQV 840
+ NQ + +QQ+H QQ Q Q +Q Q +P ++ HQ Q++ Q+
Sbjct: 678 IPNQQQQQQQQLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQL 734
Score = 31.1 bits (67), Expect = 3.7
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 4/106 (3%)
Query: 713 KPPRFQKIQEEMNKHHQNMNMPYNNTYQQNQYKDRHMRNDRNPNDRGPQQNYNHNSSTMD 772
KP + Q++ + HQ QQ Q + +H++ + P + QQ +
Sbjct: 675 KPQIPNQQQQQQQQLHQQQQQ--QQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQH 732
Query: 773 GLVDATSKLNLLSNQSRIDEQQVHNYQQHTDQSYQSKQTYPSNHSQ 818
L + + + Q + +QQ H Q Q +Q P N Q
Sbjct: 733 QL--SQLQHHQQQQQQQQQQQQQHQLTQLQHHHQQQQQASPLNQMQ 776
Score = 30.3 bits (65), Expect = 6.4
Identities = 21/141 (14%), Positives = 55/141 (39%), Gaps = 5/141 (3%)
Query: 683 NRNRSDRRHYSNDNLYSSYREDRKYQSQNEKPPRFQKIQEEMNKHHQNMNMPYNNTYQQN 742
N+ + ++ + ++ Q Q+ + + ++Q++ +H Q + + Q+
Sbjct: 680 NQQQQQQQQLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQLSQLQH 739
Query: 743 QYKDRHMRNDRNPNDRGPQQNYNH----NSSTMDGLVDATSKLNLLSNQ-SRIDEQQVHN 797
+ + + + + Q ++H +S ++ + TS LN + Q S +++ Q
Sbjct: 740 HQQQQQQQQQQQQQHQLTQLQHHHQQQQQASPLNQMQQQTSPLNQMQQQTSPLNQMQQQQ 799
Query: 798 YQQHTDQSYQSKQTYPSNHSQ 818
Q Q+ P Q
Sbjct: 800 QPQQMVMGGQAFAQAPGRSQQ 820
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 35.9 bits (79), Expect = 0.13
Identities = 32/153 (20%), Positives = 63/153 (41%), Gaps = 7/153 (4%)
Query: 197 WHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKDGKMK 256
W+P +A+ T + L+ L + + VT + P G I +DG +
Sbjct: 32 WNPEKDLLAMVTEDSKILLHRFNWQRL--WTISPGKPVTSLCWRPDGKAIAVGLEDGTIS 89
Query: 257 ILDLLEGHPIFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN-FTDLSSESKENE 315
+ D+ G + L H+ V +N+ G + + + V+ +T+ F + +
Sbjct: 90 LHDVENGKLLRNLKPHDVAVVCLNWEEDGQSNTDESGNFSVYEDRTSRFFPPAPRPPKMP 149
Query: 316 GQNMITGQRHLTEEGIDTITE--NGQIQDVNIL 346
G ++ G ++G D++ E N + NIL
Sbjct: 150 G--LVAGDSSFMDDGEDSLAELSNTSFRKFNIL 180
Score = 31.9 bits (69), Expect = 2.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 195 LAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAV 234
L W P G +AV G + L+D+ L++ H+ AV
Sbjct: 70 LCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAV 109
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 35.9 bits (79), Expect = 0.13
Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 66 VMDVTFSSSGKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASD 125
V ++ FS +G+Y+ + S D+T+RI+ + + + K+ +++ DG + +
Sbjct: 219 VKNIVFSRNGQYLLTNSHDRTIRIY-ENLLPAKNVLKSLEDLGKNID-GLDGIEKMKTVG 276
Query: 126 DKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSII---ASCSDDKSTKLWNLDSGECI 182
K + L+ +F S V +W + S DG + ++C + +W+ +G +
Sbjct: 277 SKCLTLF----REFQDS-VTKMHW-KAPCFSGDGEWVVGGSACKGEHKIYIWD-RAGHLV 329
Query: 183 HTYKDLKGHGLHLAWHP 199
+ K + LAWHP
Sbjct: 330 KILEGPKEALIDLAWHP 346
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 24 ITALYYNPNDQQIATSSLDNSVLLWDL--RGTMRSYRFQGHDEAVMDVTFSSSGKYMASA 81
I + +N +A D ++WD RG + R A+ V++S G + +
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVS 85
Query: 82 SRDKTVRIW 90
+ DK++ +W
Sbjct: 86 AADKSLTLW 94
>At1g73180.1 68414.m08469 eukaryotic translation initiation
factor-related similar to eukaryotic translation
initiation factor 2A (GI:21956484) [Homo sapiens];
similar to Eukaryotic translation initiation factor 3
subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b)
(Swiss-Prot:P55884) [Homo sapiens]
Length = 513
Score = 35.9 bits (79), Expect = 0.13
Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 92 PTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWSTHKHKFISSFVGHTNWVR 151
P T K + + +FS DGSK++ D V+ ++ + SF V
Sbjct: 23 PPFTNGQPTLKLERVSCSNTKFSVDGSKLMAMKSDGVISIYDATSLTEVRSFTIAN--VT 80
Query: 152 CARMSNDGSII-----ASCSDDKSTKLWNLDSGECIHTY 185
A +S G+ + + +K+ +WN ++G+ H++
Sbjct: 81 AAELSPCGTYLQTFQKPTTPQEKNVSIWNTETGDLAHSH 119
>At2g44200.1 68415.m05500 expressed protein
Length = 493
Score = 35.5 bits (78), Expect = 0.17
Identities = 45/228 (19%), Positives = 86/228 (37%), Gaps = 28/228 (12%)
Query: 586 QKRDNSENRNKEKPQKEQDPVKRKGRH-KESGDEDGVPVKPSGKVSLFDFLEDKLPNVPE 644
QK+ +S R+ + ++ RK H K SG D +P LED+
Sbjct: 192 QKQSSSRQRSDSEEDSGEENNGRKSHHQKTSGTHDRHYERPRSD------LEDESKGRES 245
Query: 645 KDKNTRQNNSSMEDRYDXXXXXXXXXXXXXXXXXHEGANRNRSDRRHYSNDNLYSSYRED 704
+D++ + S ++D + E +R S DN Y R D
Sbjct: 246 RDRHYEKRRSELDDGHKRRERHDTHYERRRSEMDDES-------KRRESRDNHYERRRSD 298
Query: 705 RKYQSQNEKPPRFQKIQEEMNKHHQNMNMPYNNTYQQNQYKDRHMRN--DRNPNDRGPQQ 762
+S K +E +KH + ++ Y++ + +D+ R+ D P R +
Sbjct: 299 LDDES---------KRRESHDKHFERQRSDLDDEYKRRESQDKRRRSDIDDEPKRRDARP 349
Query: 763 NYNHNSSTMDGLVDATSKLNLLSNQSRIDEQQVHNYQQHTDQSYQSKQ 810
N + + + G V+ + NL S +++ + YQ+++
Sbjct: 350 NEKYRNRSPKGGVE---RENLKSYGQEDKKRKAEDLDSGKPNEYQNRR 394
Score = 33.1 bits (72), Expect = 0.91
Identities = 30/161 (18%), Positives = 71/161 (44%), Gaps = 13/161 (8%)
Query: 679 HEGANRNRSDRRHYSNDNLYSSYREDRKYQSQNEKPPRFQKIQEEMNKHHQNMNMPYNNT 738
H+ ++ +S + + + S E+ + N + QK ++H++ +
Sbjct: 180 HKKKHKRKSGKHQKQSSSRQRSDSEEDSGEENNGRKSHHQKTSGTHDRHYERPRSDLEDE 239
Query: 739 YQQNQYKDRHMRNDRNPNDRGPQQNYNHNSSTMDGLVDATSKLNLLSNQSRIDEQQVHNY 798
+ + +DRH R+ D G ++ H++ + + + ++S+ E + ++Y
Sbjct: 240 SKGRESRDRHYEKRRSELDDGHKRRERHDT-------HYERRRSEMDDESKRRESRDNHY 292
Query: 799 Q-QHTDQSYQSKQTYPSNHSQDIPPFRRSNDLHQDGYQRRQ 838
+ + +D +SK+ S D R+ +DL D Y+RR+
Sbjct: 293 ERRRSDLDDESKR----RESHDKHFERQRSDL-DDEYKRRE 328
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 35.1 bits (77), Expect = 0.23
Identities = 36/171 (21%), Positives = 71/171 (41%), Gaps = 10/171 (5%)
Query: 1 MMEDKVTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQ 60
++ED + K+LK ++ L +N + +AT + D ++ +++
Sbjct: 123 IIEDDNEEESEKVVKELKDVGQQLS-LSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNES 181
Query: 61 GHDEAVMDVTFSSSGKYMASASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSSD--G 117
+V +TFS SGK++ S R+W V + K + S +FS D G
Sbjct: 182 KTHASVKSLTFSESGKFLVSLGA-PLCRVWDVNASAAIASLSKEKDEMFASCRFSVDNSG 240
Query: 118 SKII-----TASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIA 163
S+++ T ++ +T + S + N + +S DG ++A
Sbjct: 241 SEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLA 291
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 35.1 bits (77), Expect = 0.23
Identities = 36/171 (21%), Positives = 71/171 (41%), Gaps = 10/171 (5%)
Query: 1 MMEDKVTTPEPCLKKQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQ 60
++ED + K+LK ++ L +N + +AT + D ++ +++
Sbjct: 123 IIEDDNEEESEKVVKELKDVGQQLS-LSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNES 181
Query: 61 GHDEAVMDVTFSSSGKYMASASRDKTVRIW-VPTVTGSTGMFKAHSQTVRSVQFSSD--G 117
+V +TFS SGK++ S R+W V + K + S +FS D G
Sbjct: 182 KTHASVKSLTFSESGKFLVSLGA-PLCRVWDVNASAAIASLSKEKDEMFASCRFSVDNSG 240
Query: 118 SKII-----TASDDKVVKLWSTHKHKFISSFVGHTNWVRCARMSNDGSIIA 163
S+++ T ++ +T + S + N + +S DG ++A
Sbjct: 241 SEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLA 291
>At5g07940.1 68418.m00920 expressed protein
Length = 1526
Score = 35.1 bits (77), Expect = 0.23
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 759 GPQQNYNHNSSTMDGLVDATSKLNLLSNQSRIDEQQVHNYQQH-TDQSYQSKQTYPSNHS 817
G Q+ H S +D + + L+ NQ +ID + N + + T QS ++ + S++S
Sbjct: 18 GLSQDQQHQSQVVDRSWSSFNN-GLVGNQRQIDPSLIANLKSYNTQQSVDHERGHQSSNS 76
Query: 818 QDIPPFRRS---NDLHQDGYQRRQQVPNGYI 845
Q + + ++ + Q QQ+PNGY+
Sbjct: 77 QHGLNYTQQPIRSEFSRSLLQEHQQLPNGYM 107
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 35.1 bits (77), Expect = 0.23
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 559 DAGFTEEQAEATLKYTKNNVDRALKILQKRDNSENRN---KEKPQ-KEQDPVKRKGRHKE 614
+AG + E+ + + + D+ ++Q++D + + KEK Q KE+DP K K + K+
Sbjct: 631 EAGDSREKDQEEDVVQEKDGDQEEDVVQEKDGDQEEDGVSKEKEQEKEKDP-KEKEKEKD 689
Query: 615 SGDEDGVPVKP 625
++DG P KP
Sbjct: 690 PKEKDGGPSKP 700
>At3g58120.1 68416.m06481 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
;supported by cDNA gi|15100054|gb|AF401300.1|AF401300
Length = 329
Score = 35.1 bits (77), Expect = 0.23
Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 7/135 (5%)
Query: 679 HEGANRNRSDRRHYSNDNLYSSYREDRKYQSQNEKPPRFQKIQEEMNKHHQNMNMPYNNT 738
H N N R SN + S + + E PP M+ + N N N
Sbjct: 110 HHSINGNVGPTRSSSNTSTPSDHNSLSDDDNNKEAPPSDH--DHHMDNNVANQNNAAGNN 167
Query: 739 YQQNQYKDRHMRNDRNPNDRGPQQNYNHNSSTMDGLVDATSKLNLLSNQSRIDEQQVH-- 796
Y ++ + + P D GP N N S+ + + D +L+N+ +V
Sbjct: 168 YNESDEVQSQCKTE--PQD-GPSANQNSGGSSGNRIHDPKRVKRILANRQSAQRSRVRKL 224
Query: 797 NYQQHTDQSYQSKQT 811
Y ++S S QT
Sbjct: 225 QYISELERSVTSLQT 239
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 35.1 bits (77), Expect = 0.23
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 33 DQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSSGKYMASASRDKTVRIWVP 92
++Q++ SS +V + L+ ++++ F G D V + +A + TV+++ P
Sbjct: 14 NRQLSDSSPAQNVKKFGLKNSIQT-NF-GSDY-VFQIVPKIDWTAIAVSLSTNTVKLYSP 70
Query: 93 TVTGSTGMFKAHSQTVRSVQFSSDGSK----IITASDDKVVKLWSTHKHKFIS 141
G K HS TV + FSSD + + + S D ++ W T + +S
Sbjct: 71 VTGQYYGECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVS 123
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 35.1 bits (77), Expect = 0.23
Identities = 41/248 (16%), Positives = 106/248 (42%), Gaps = 25/248 (10%)
Query: 15 KQLKGHKNAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSSS 74
+ ++ HK+ ++ + + +AT S D +V++WD+ R + ++ V +
Sbjct: 1040 QSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDI------LRMRTPEKRVRN------ 1087
Query: 75 GKYMASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGSKIITASDDKVVKLWST 134
+ + +R + + + H + + S+D +I+ S D +
Sbjct: 1088 -------THAEVLRKDIVIADAPSHILCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTL 1140
Query: 135 HKHKFISSFVGHTNWVRCARM--SNDGSIIASCSDDKSTKLWNLDSGECIHTYKDLKGHG 192
+ ++I S + H + +++ S+ G I+ DD S L++++ + + + +
Sbjct: 1141 REGRYIRS-LKHPSGSAVSKLAASHHGRIVLYGDDDLSLHLYSINGKHLASSESNGRINC 1199
Query: 193 LHLAWHPSGCYVAVATSHGNVKLYDIRTHNLVQYYSIHNEAVTQVAIHPSGSYILTASKD 252
L L+ G ++ A G + + + T +V+ Y+ + +T + + + L +KD
Sbjct: 1200 LELS--KCGEFLVSAGDQGQIIVRSMNTLEVVKRYNGAGKIITSLTVTQEECF-LAGTKD 1256
Query: 253 GKMKILDL 260
G + + +
Sbjct: 1257 GALLVYSI 1264
Score = 30.3 bits (65), Expect = 6.4
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 240 HPSGSYI--LTASKDGKMKIL--DLLEGHPIFTLSGH-------NGPVNAVNFSPTGDTF 288
HPSGS + L AS G++ + D L H +++++G NG +N + S G+
Sbjct: 1151 HPSGSAVSKLAASHHGRIVLYGDDDLSLH-LYSINGKHLASSESNGRINCLELSKCGEFL 1209
Query: 289 SSAGDDKLVFIWKTNFTDLSSESKENEGQNMITGQRHLTEEGIDTITENGQI 340
SAGD + + N L + N +IT EE T++G +
Sbjct: 1210 VSAGDQGQIIVRSMN--TLEVVKRYNGAGKIITSLTVTQEECFLAGTKDGAL 1259
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 34.7 bits (76), Expect = 0.30
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 561 GFTEEQAEATLKYTKNNVDRALKILQKRDNSENRNKEKPQKEQDPVKRKGRHKESGDEDG 620
GF + K+ K+ R K +K+ +++K+K +KE+ + + KE G E G
Sbjct: 8 GFEFQDKYKEKKHKKDKEKREGK--EKKSKDRSKDKQKERKEKKDKHKDQKDKEKGKEKG 65
Query: 621 VPVKPSGKVSLFDFLEDKLPNVPEKDKNTRQNNSSMEDRY 660
P++ K L + V + T QNNS+ E +Y
Sbjct: 66 KPLEEK-KAELLTNAGHRENRVTD----TVQNNSNGESKY 100
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 34.7 bits (76), Expect = 0.30
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 511 KSLQEAAKQDNPEFEAQRKG--AIAEAQRMSGVFGGGTKPLLDANVQKIVDAGFTEEQAE 568
K E K +N E + K ++ + Q + ++GG +K K V+A +++++
Sbjct: 703 KDSMEDKKLENKESQTDSKDDKSVDDKQEEAQIYGGESKD------DKSVEAKGKKKESK 756
Query: 569 ATLKYTKNNVDRALKILQKRDNSENRNKEKPQKEQDPVKRKGRHKESGDEDGVPVKPSGK 628
K TK N +R + K +N + KE + E KG KES D V K + K
Sbjct: 757 ENKK-TKTNENR---VRNKEENVQGNKKESEKVE------KGEKKESKDAKSVETKDNKK 806
Query: 629 VSLFDFLEDKLPNVPEKDKNTRQNNSSME 657
+S + ++ E +K ++ + +
Sbjct: 807 LSSTENRDEAKERSGEDNKEDKEESKDYQ 835
Score = 34.3 bits (75), Expect = 0.39
Identities = 39/232 (16%), Positives = 87/232 (37%), Gaps = 10/232 (4%)
Query: 583 KILQKRDNSENRNKEKPQKEQDPVKRKGRHKESGDEDGVPVKPSGKVSLFDFLEDKLPNV 642
K +K D E+ + + +KE+D K K +H+ES K K + + LED+ N
Sbjct: 1077 KSKKKEDKKEHEDNKSMKKEEDK-KEKKKHEESKSRK----KEEDKKDM-EKLEDQNSNK 1130
Query: 643 PEKDKNTR---QNNSSMEDRYDXXXXXXXXXXXXXXXXXHEGANRNRSDRRHYSNDNLYS 699
++DKN + Q+ ++ D + +N D++ +
Sbjct: 1131 KKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQ 1190
Query: 700 SYREDRKYQSQNEKPPRFQKIQEEMNKHHQNMNMPYNNTYQQNQYKDRHMRNDRNPNDRG 759
+E +S+ +K + ++ +++ +N ++N+ KD + +
Sbjct: 1191 KKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQK-ETKKEKNKPKDDKKNTTKQSGGKK 1249
Query: 760 PQQNYNHNSSTMDGLVDATSKLNLLSNQSRIDEQQVHNYQQHTDQSYQSKQT 811
+ AT++ + +++ I Q H+D S ++
Sbjct: 1250 ESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDES 1301
Score = 31.5 bits (68), Expect = 2.8
Identities = 39/191 (20%), Positives = 62/191 (32%), Gaps = 17/191 (8%)
Query: 564 EEQAEATLKYTKNNVDRALKILQKRDNSENR-NKEKPQKEQDPVKRKGRHKESGDEDGVP 622
+E LK ++N K + EN+ NKEK KE + K R K+ +E
Sbjct: 964 KEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEK--KESEDSASKNREKKEYEEKKSK 1021
Query: 623 VKPSGKVSLFDFLEDKLPNVPEKDKNTRQNNSSMEDRYDXXXXXXXXXXXXXXXXXHEGA 682
K K + K EKD R++ E+ D E
Sbjct: 1022 TKEEAKKEKKKSQDKKRE---EKDSEERKSKKEKEESRDLKAKKK-----------EEET 1067
Query: 683 NRNRSDRRHYSNDNLYSSYREDRKYQSQNEKPPRFQKIQEEMNKHHQNMNMPYNNTYQQN 742
+ H S ED K + E +K +E ++ + QN
Sbjct: 1068 KEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQN 1127
Query: 743 QYKDRHMRNDR 753
K + +N++
Sbjct: 1128 SNKKKEDKNEK 1138
Score = 31.1 bits (67), Expect = 3.7
Identities = 41/247 (16%), Positives = 103/247 (41%), Gaps = 18/247 (7%)
Query: 590 NSENRNKEKPQKEQDPVKRKGRHKESGDEDGVPVKPSGKVSLFDFLEDKLPNVPEKDKNT 649
N N ++ K + VK+ E G+E GK + D +EDK + K+ T
Sbjct: 669 NDNNMESKEDTKSEVEVKKNDGSSEKGEE--------GKENNKDSMEDK--KLENKESQT 718
Query: 650 -RQNNSSMEDRYDXXXXXXXXXXXXXXXXXHEGANRNRSDRRHYSNDNLYSSYRED-RKY 707
+++ S++D+ + ++ +++ +N+N + E+ +
Sbjct: 719 DSKDDKSVDDKQEEAQIYGGESKDDKSVEAKGKKKESKENKKTKTNENRVRNKEENVQGN 778
Query: 708 QSQNEKPPRFQKIQEEMNKHHQNM-NMPYNNTYQQNQYKDRHMRNDRNPNDRGPQ-QNYN 765
+ ++EK + +K + + K + N ++T +++ K+R +++ + Q+
Sbjct: 779 KKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKERSGEDNKEDKEESKDYQSVE 838
Query: 766 HNSSTMDGLVDATSKLNLLSNQSRIDEQQVH---NYQQHTDQSYQSKQTYPSNHSQDIPP 822
+G VD T+ N ++ D++ V N ++ + + Q + ++++
Sbjct: 839 AKEKNENGGVD-TNVGNKEDSKDLKDDRSVEVKANKEESMKKKREEVQRNDKSSTKEVRD 897
Query: 823 FRRSNDL 829
F + D+
Sbjct: 898 FANNMDI 904
Score = 29.9 bits (64), Expect = 8.5
Identities = 36/193 (18%), Positives = 66/193 (34%), Gaps = 7/193 (3%)
Query: 563 TEEQAEATLKYTKNNVDRALKILQKRDNSENRNKEKPQKEQDPVKRKGRHK---ESGDED 619
T+E+ E+ +K D+ K E KEK + E+ ++K K E ++
Sbjct: 1067 TKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQ 1126
Query: 620 GVPVKPSGKVSLFDFLEDKLPNVPEKDKNTRQNNSSMEDRYDXXXXXXXXXXXXXXXXXH 679
K K KL K ++N E +
Sbjct: 1127 NSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSS 1186
Query: 680 EGANRNRSDRRHYSNDNLYSSYREDRKYQSQNEKPPRFQKIQEEMNKHHQNMNMPYNNTY 739
+ + + S + EDRK Q+ E+ + ++ ++E NK + NT
Sbjct: 1187 KDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNKPKDDK----KNTT 1242
Query: 740 QQNQYKDRHMRND 752
+Q+ K M ++
Sbjct: 1243 KQSGGKKESMESE 1255
Score = 29.9 bits (64), Expect = 8.5
Identities = 37/188 (19%), Positives = 72/188 (38%), Gaps = 12/188 (6%)
Query: 572 KYTKNNVDRALKILQKRDNSENRNKEKPQKEQDPVKRKGRHKESGDEDGVP-------VK 624
K +K+ + K +++ + + + E+ +K+Q V+ + KE+ E P K
Sbjct: 1184 KSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNKPKDDKKNTTK 1243
Query: 625 PSGKVSLFDFLEDKLPNVPEKDKNTRQNNSSMEDRYDXXXXXXXXXXXXXXXXXHEGANR 684
SG E K +K + T Q +S E + + ++
Sbjct: 1244 QSGGKKESMESESKEAENQQKSQATTQADSD-ESKNEILMQADSQADSHSDSQADSDESK 1302
Query: 685 NRSDRRHYSNDNLYSSYREDRKYQSQNEKPPRFQKIQEEMNKHHQNMNMPYNNTYQQNQY 744
N + S + EDRK Q+ + + ++ +EE NK + NT +Q+
Sbjct: 1303 NEILMQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNKPKDDK----KNTTKQSGG 1358
Query: 745 KDRHMRND 752
K M ++
Sbjct: 1359 KKESMESE 1366
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 34.7 bits (76), Expect = 0.30
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 266 IFTLSGHNGPVNAVNFSPTGDTFSSAGDDKLVFIWKTN 303
+ +LSGH G V + + +G T +S G D +V +W++N
Sbjct: 273 VSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSN 310
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 34.7 bits (76), Expect = 0.30
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 105 SQTVRSVQFSSDGSKIITASDDKVVKLWS-THKHKFISS----FVGHTNWVRCARMSNDG 159
+ ++ S+ FS ++ S D V+ W T I+S + H V C+ +DG
Sbjct: 26 TDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDG 85
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHP 199
+ + + DK K+W L SG T +AW P
Sbjct: 86 TTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIP 125
Score = 33.9 bits (74), Expect = 0.52
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 64 EAVMDVTFSSSGKYMASASRDKTVRIWVPT-----VTGSTGMFKAHSQTVRSVQFSSDGS 118
+++ ++FS + + S D VR W T + + +H Q V + DG+
Sbjct: 27 DSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGT 86
Query: 119 KIITASDDKVVKLW 132
+ T DK K+W
Sbjct: 87 TVFTGGCDKQAKMW 100
Score = 33.5 bits (73), Expect = 0.69
Identities = 24/115 (20%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Query: 22 NAITALYYNPNDQQIATSSLDNSVLLWDLRGTMRSYRFQ-----GHDEAVMDVTFSSSGK 76
++I++L ++P + +S D V W++ + S + HD+ V+ + G
Sbjct: 27 DSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGT 86
Query: 77 YMASASRDKTVRIWVPTVTGSTGMFKA-HSQTVRSVQFSSDGSKIITASDDKVVK 130
+ + DK ++W P ++G+ A H + + + ++T S DK +K
Sbjct: 87 TVFTGGCDKQAKMW-PLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDKTLK 140
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 34.3 bits (75), Expect = 0.39
Identities = 45/215 (20%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 20 HKNAITALYYNPNDQQI-ATSSLDNSVLLWDLRGTMRSYRFQGHDEAVMDVTFSS-SGKY 77
H ++ L +N + I A++S D V +WD+ + H + V V ++ + +
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 323
Query: 78 MASASRDKTVRIWVPTVTGSTGMFKAHSQTVRSVQFSSDGS-KIITASDDKVVKLWSTHK 136
+ S S D+TV + +G + V S+ + + + +D VK +
Sbjct: 324 LLSGSFDQTVVMKDGRQPSHSGFKWSVMSDVESLAWDPHCEHSFVVSLEDGTVKGFDIRA 383
Query: 137 HKFISSFVGHTNWVRCARMSNDG-----------SIIASCSDDKSTKLWNLDSGE--CIH 183
+ S + + A + G +++A+ S DKS KLW+L + E CI
Sbjct: 384 AQSGSDSDLNPTYTIQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSCIA 443
Query: 184 TYKDLKGHGLHLAWHPSGCY-VAVATSHGNVKLYD 217
T++ G +++ + +A+ S G + ++D
Sbjct: 444 THQPNAGAVFSISFAVDNPFLLAIGGSKGELHVWD 478
Score = 31.5 bits (68), Expect = 2.8
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 160 SIIASCSDDKSTKLWNLDSGECIHTYKDLKGHGLHLAWHPSGCYVAVATSHG-NVKLYDI 218
+I+AS S DK K+W++ +G C T + +AW+ V ++ S V + D
Sbjct: 279 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVMKDG 338
Query: 219 RTHNLVQY-YSIHNEAVTQVAIHPSGSYILTAS-KDGKMKILDLLEG--------HPIFT 268
R + + +S+ ++ V +A P + S +DG +K D+ +P +T
Sbjct: 339 RQPSHSGFKWSVMSD-VESLAWDPHCEHSFVVSLEDGTVKGFDIRAAQSGSDSDLNPTYT 397
Query: 269 LSGH--NGPVNAVNFS-PTGDTFSSAGDDKLVFIW 300
+ H + V++++++ T + ++ DK V +W
Sbjct: 398 IQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLW 432
Score = 31.5 bits (68), Expect = 2.8
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 11 PCLKKQLKGHKNAITALYYNPNDQQI-ATSSLDNSVLLWDLRGTMRS--YRFQGHDEAVM 67
P Q ++++ YN + + AT S+D SV LWDL S Q + AV
Sbjct: 394 PTYTIQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVF 453
Query: 68 DVTFSSSGKYMASASRDK-TVRIW 90
++F+ ++ + K + +W
Sbjct: 454 SISFAVDNPFLLAIGGSKGELHVW 477
>At2g17510.1 68415.m02025 ribonuclease II family protein similar to
SP|P37202 Mitotic control protein dis3
{Schizosaccharomyces pombe}; contains Pfam profile
PF00773: RNB-like protein
Length = 933
Score = 34.3 bits (75), Expect = 0.39
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 579 DRALKILQKRDNSENRNKEKPQKEQDPVKRKG-RHKESGDEDGVPVKPSGKV 629
++AL I ++ D ++ P D + H+ SGD++ PV+PSG+V
Sbjct: 290 EKALSIAEEDDEEDDTVHLAPDNVDDAPRTSNLSHETSGDKNAAPVRPSGRV 341
>At2g02570.2 68415.m00197 expressed protein
Length = 300
Score = 34.3 bits (75), Expect = 0.39
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 906 VGDRCLALYWEDNNFYEAEITGVSANTVVVKFCAYGNHEEVLKSNCLP 953
VG + A++ +D +Y+A I +AN V + +GN EEV N P
Sbjct: 105 VGTKVQAVFSDDGEWYDATIEAHTANGYFVAYDEWGNKEEVDPDNVRP 152
>At2g02570.1 68415.m00196 expressed protein
Length = 300
Score = 34.3 bits (75), Expect = 0.39
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 906 VGDRCLALYWEDNNFYEAEITGVSANTVVVKFCAYGNHEEVLKSNCLP 953
VG + A++ +D +Y+A I +AN V + +GN EEV N P
Sbjct: 105 VGTKVQAVFSDDGEWYDATIEAHTANGYFVAYDEWGNKEEVDPDNVRP 152
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 33.9 bits (74), Expect = 0.52
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 57 YRFQGHDEAVMDVTFS---SSGKYMASASRDKTVRIW 90
Y GH+ AV V FS G+++ S DKTV+IW
Sbjct: 242 YSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIW 278
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.130 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,997,491
Number of Sequences: 28952
Number of extensions: 1064133
Number of successful extensions: 5728
Number of sequences better than 10.0: 305
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 3078
Number of HSP's gapped (non-prelim): 1589
length of query: 961
length of database: 12,070,560
effective HSP length: 88
effective length of query: 873
effective length of database: 9,522,784
effective search space: 8313390432
effective search space used: 8313390432
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 64 (29.9 bits)
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