Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001037-TA|BGIBMGA001037-PA|IPR001412|Aminoacyl-tRNA
synthetase, class I, IPR002300|Aminoacyl-tRNA synthetase, class Ia,
IPR002308|Cysteinyl-tRNA synthetase, class Ia, IPR013155|tRNA
synthetase, valyl/leucyl, anticodon-binding, IPR004493|Leucyl-tRNA
synthetase archae/euk cytosolic, class Ia, IPR009080|Aminoacyl-tRNA
synthetase, class 1a, anticodon-binding
(1198 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0644 + 19181335-19184424 1007 0.0
05_03_0109 + 8490841-8490940,8492098-8493057,8494055-8495520 786 0.0
01_01_0124 - 1145105-1145320,1145480-1145611,1146485-1146562,114... 49 3e-05
07_01_0453 + 3420727-3420800,3421666-3421792,3422348-3422431,342... 48 3e-05
02_01_0623 - 4676847-4676879,4676953-4677115,4677467-4677620,467... 44 0.001
06_03_0921 + 25949453-25949986,25950150-25950188,25950380-259504... 40 0.009
03_05_0776 + 27625122-27625415,27627226-27627273,27627455-276275... 40 0.009
10_08_0568 + 18837195-18837203,18837694-18837741,18837853-188379... 40 0.016
03_02_0919 - 12392471-12392636,12392740-12392931,12393366-123934... 40 0.016
03_01_0304 - 2378657-2378704,2378790-2378795,2378860-2379039,237... 38 0.049
09_06_0243 - 21813223-21813456,21814266-21814367,21814501-218147... 34 0.60
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 31 4.2
02_04_0632 + 24614659-24615528,24615636-24616133 31 5.6
03_01_0081 + 645214-645228,645791-645856,645973-646142,646265-64... 30 9.8
>09_04_0644 + 19181335-19184424
Length = 1029
Score = 1007 bits (2494), Expect = 0.0
Identities = 498/1011 (49%), Positives = 659/1011 (65%), Gaps = 30/1011 (2%)
Query: 24 EYLQEIEKKVQERWESQKIFEVEAPDDGKSH-EKFLCTFPYPYMNGRLHLGHTFSLSKCE 82
+ L +I+ Q+ WE K+FE E + EKF FPYPYMNG LHLGH FSLSK E
Sbjct: 15 DILLKIQSDAQKWWEESKVFEAEPGNKPPGPGEKFFGNFPYPYMNGLLHLGHAFSLSKLE 74
Query: 83 FACRYYRLKGRMVLFPFGFHCTGMPIKACADKLKREMAVYGCPPVFPE---DEELIVKDE 139
F Y RL+G VL PF FHCTGMPIKA ADKL RE YG PP FPE D V D
Sbjct: 75 FGAAYQRLRGSNVLLPFAFHCTGMPIKASADKLSREAQQYGYPPAFPEVEDDSSAEVADS 134
Query: 140 D-------IIPXXXXXXXXXXXXXXXXXXXYQWQIMKSIGVPEEEIKEFANESYWLEYFP 192
++P +QW+IM+ G+ +EEI +F + +WL YFP
Sbjct: 135 SQADNAASVVPDKFKSKKSKAASKVGMQK-FQWEIMRGFGLSDEEIAKFQDPYHWLTYFP 193
Query: 193 PRAVTDLKRMGIHVDWRRKFITTDANPFYDSFIKWQFNHLKDRNKIMYGKRYTIFSPLDK 252
P A DLK G+ DWRR FITTD NPFYD+F++WQ LK K++ RYTI+SPLD
Sbjct: 194 PLAKEDLKAFGLGCDWRRSFITTDMNPFYDAFVRWQMRKLKKMGKVVKDMRYTIYSPLDG 253
Query: 253 QPCMDHDRSTGEGAGPQEYTLIKMVVLEPLPNCLISLKGKKISLVAATLRPETMYGQTNC 312
QPC DHDR++GEG PQEY LIKM V+ P P L +++G+ + L AATLRPETMYGQTNC
Sbjct: 254 QPCADHDRASGEGVQPQEYVLIKMEVVPPFPPKLKTMEGRNVYLAAATLRPETMYGQTNC 313
Query: 313 WVHPDIKYIAFETVKDGVFICTKRAARNMSYQDFTEKDGEFKILLEIVGQDLLGLSVQSP 372
WV PD KY AFE VFI T RAA N++YQ+ + + L+E+ G DL+GL ++SP
Sbjct: 314 WVLPDGKYGAFEINDTDVFIVTSRAALNLAYQNLSRVPEKPTCLMELSGCDLIGLPLKSP 373
Query: 373 FTCYPKIYALPMLTIKEDKGTGIVTSVPSDSPDDYAALVDLQKKPAFREKYGIADDMILP 432
IYALPMLTI DKGTGIVTSVPSDSPDD+ AL DL KPA R+KYG+ D+ +LP
Sbjct: 374 LAFNEIIYALPMLTILTDKGTGIVTSVPSDSPDDFMALQDLVAKPALRQKYGVKDEWVLP 433
Query: 433 FKPVPILETPDFGNLSAVYLYDELKIQSQNDREKLTQAKEMVYLKGFYDGVLLVGEHKGS 492
FK VPI+ P+FG+ SA + +LKI+SQND+EKL +AK M YLKGF DG ++VGE G
Sbjct: 434 FKVVPIINIPEFGDKSAEKVCLDLKIKSQNDKEKLAEAKRMTYLKGFTDGTMIVGEFNGR 493
Query: 493 KIQDVKKNLQTKLIQEGKAVIYYEPEKTIISRSGDECVVALCNQWYLDYGNEEWKGQAEK 552
K+Q+ K ++ KL++EG AV+Y EPEK ++SRSGDECVVAL +QWY+ YG EWK +A +
Sbjct: 494 KVQEAKPLIKNKLLEEGTAVLYSEPEKKVMSRSGDECVVALTDQWYITYGETEWKQKAVQ 553
Query: 553 ALEAMNTYHDEVRKNFQATLKWLHEYACSRTYGLGTKLPWDQQWVIESLSDSTIYNAYYT 612
LE MNT+ E R F+ TL WL+++ACSR++GLGT++PWD+Q+++ESLSDST+Y AYYT
Sbjct: 554 CLEKMNTFSAETRNGFEHTLGWLNQWACSRSFGLGTRIPWDEQFLVESLSDSTLYMAYYT 613
Query: 613 ISHFLQGDTFRGNKENTLKIKPEQMTSEVWDYIFFKEAPLPKNTVIDRKSLDLMRKSFQF 672
I+H LQ G + ++ I+PEQMT EVWDY+F + P P N+ I L M+ F++
Sbjct: 614 IAHLLQNGNMYGKEISS--IRPEQMTDEVWDYVFC-DGPAP-NSDIPPALLSKMKLEFEY 669
Query: 673 WYPVDLRVSGKDLIQNHLTFYIYNHCAMWPNEEEKWPKGIRANGHLMLNSAKMSKSEGNF 732
WYP D+RVSGKDLIQNHLTF IYNH A+ P E WP+G R NGHLMLNS KMSKS GNF
Sbjct: 670 WYPFDIRVSGKDLIQNHLTFSIYNHTALLP--EHHWPRGFRCNGHLMLNSEKMSKSTGNF 727
Query: 733 LTLSESIEKFSADGMRLTLADAGDSVEDANFVESTADAAILRLYTFIEWVKEVLASKSTL 792
TL ++IE+FS+D R LADAGD ++DANFV TA+AAILRL I W++EV+A++S+L
Sbjct: 728 RTLRQAIEEFSSDATRFALADAGDGMDDANFVFETANAAILRLTKEIAWMEEVIAAESSL 787
Query: 793 RSG-DYNFHDKVFVSEMNIKILQTDDNYNRMLFKEALKSGFFELQAARDKYRELCSEGGM 851
R+G + D VF +E+NI +++T+ +YN +F++ALK GF++LQ ARD+YR C GM
Sbjct: 788 RAGPPSTYADHVFANEINIAVIETEKSYNAFMFRDALKLGFYDLQLARDEYRLSCGAAGM 847
Query: 852 HVELVTKYIEVQAKLMSPICPHVAEYVW-ELLGNKTSILHSRWPVAGDVDEVAVKASNYL 910
+ EL+ +++EVQ +L++PICPH AE+VW +L + + + WP+AG D A+ YL
Sbjct: 848 NRELLWRFMEVQTRLITPICPHYAEHVWRNILRKEGFAIKAGWPIAGTPDPTLRIANKYL 907
Query: 911 MDAAHSFRVYLKNHCALXXXXXXXXX---XXXXXXXXAVIWVAKEFPKWQRIILTTLK-- 965
D+ FR L+ + +++V + + W+ L L+
Sbjct: 908 QDSIVKFRKLLQKQESGSKKPKKGTAPPPSEQNKLTVGLVYVNENYYGWKEQCLRVLQSK 967
Query: 966 -----ELNGPDGLPDNKTISSRLSQLDELRKYSKRVMPFVQATRECVRRDG 1011
L PD + + + Q ++ K MPF+++ ++ R G
Sbjct: 968 FDSQARLFAPDEEINEALKNCSIGQETNFKQVQKLCMPFIKSKKDEARSVG 1018
>05_03_0109 + 8490841-8490940,8492098-8493057,8494055-8495520
Length = 841
Score = 786 bits (1943), Expect = 0.0
Identities = 390/804 (48%), Positives = 526/804 (65%), Gaps = 36/804 (4%)
Query: 24 EYLQEIEKKVQERWESQKIFEVEAPDDGKSH-EKFLCTFPYPYMNGRLHLGHTFSLSKCE 82
+ L +I+ +VQ+ WE K+FE +A D S EKF F YPYMNG LHLGH F+LSK E
Sbjct: 52 DLLLKIQSEVQKCWEENKVFEAKAGDTPPSPGEKFFGNFTYPYMNGMLHLGHAFTLSKLE 111
Query: 83 FACRYYRLKGRMVLFPFGFHCTGMPIKACADKLKREMAVYGCPPVFP---EDEELIVKDE 139
FA Y+RL G VL PF FHCTGMPIK ADKL +E+ YG PPV P ++ + + ++
Sbjct: 112 FAAAYHRLHGSNVLLPFAFHCTGMPIKPSADKLGKEIQQYGNPPVLPPANKNSKFELTND 171
Query: 140 DIIPXXXXXXX----XXXXXXXXXXXXY--QWQIMKSIGVPEEEIKEFANESYWLEYFPP 193
I Y QW+IM+S G+ + EI EF N +WL YFPP
Sbjct: 172 RIYGQTTASAQDKYRSKRSKSVAKSGSYKSQWEIMRSFGIADGEIVEFQNLHHWLSYFPP 231
Query: 194 RAVTDLKRMGIHVDWRRKFITTDANPFYDSFIKWQFNHLKDRNKIMYGKRYTIFSPLDKQ 253
A+ DL+ G+ DWRR FITTD NPFYD+F++WQ LK ++I+ GK+Y I+SPLD+Q
Sbjct: 232 LAMEDLEDFGLSCDWRRSFITTDMNPFYDAFVQWQMRKLKKMHRIVKGKQYMIYSPLDRQ 291
Query: 254 PCMDHDRSTGEGAGPQEYTLIKMVVLEPLPNCLISLKGKKISLVAATLRPETMYGQTNCW 313
PC+ HDR++GE PQEY LIKM V+ P P L+ L+G+ + L AATLRPET+YGQT
Sbjct: 292 PCLGHDRASGEEVEPQEYVLIKMKVIPPFPPKLMVLEGRNVYLAAATLRPETIYGQTG-- 349
Query: 314 VHPDIKYIAFETVKDGVFICTKRAARNMSYQDFTEKDGEFKILLEIVGQDLLGLSVQSPF 373
G T RAARN++YQ + + L+E++G DL+GL ++SP
Sbjct: 350 ---------------GE--ATARAARNLAYQMLSRVPEKPTCLVELLGTDLIGLPLKSPL 392
Query: 374 TCYPKIYALPMLTIKEDKGTGIVTSVPSDSPDDYAALVDLQKKPAFREKYGIADDMILPF 433
IY LPM I DKGTGIVTSVPSD+PDD+ AL +L K FR G+ D+ + PF
Sbjct: 393 ASNEVIYVLPMQNILVDKGTGIVTSVPSDTPDDFIALQELVKNQDFRVACGVKDEWVFPF 452
Query: 434 KPVPILETPDFGNLSAVYLYDELKIQSQNDREKLTQAKEMVYLKGFYDGVLLVGEHKGSK 493
+ +PI++ P FGN SA + +LK+ S +++EKL +AKE+ YLKGF DG+++VGE K
Sbjct: 453 EVIPIIDVPSFGNKSAEKVCFDLKMDSPDEKEKLAKAKEITYLKGFDDGIMIVGEFSNRK 512
Query: 494 IQDVKKNLQTKLIQEGKAVIYYEPEKTIISRSGDECVVALCNQWYLDYGNEEWKGQAEKA 553
+Q+VK ++ KL++ AV+YYEP++ +ISRSGD+CVVAL +QW + YG EWK +A +
Sbjct: 513 VQEVKPLIKEKLLKADMAVLYYEPQEKVISRSGDDCVVALTDQWLITYGEAEWKQKAIEC 572
Query: 554 LEAMNTYHDEVRKNFQATLKWLHEYACSRTYGLGTKLPWDQQWVIESLSDSTIYNAYYTI 613
L+ MNT+ E R +F+ TL WL A S ++GLGT++PWD++++++SLSDST+Y AYYTI
Sbjct: 573 LDKMNTFSVEARNSFEHTLNWLTSRARSCSFGLGTRIPWDEKFLVDSLSDSTLYMAYYTI 632
Query: 614 SHFLQGDTFRGNKENTLKIKPEQMTSEVWDYIFFKEAPLPKNTVIDRKSLDLMRKSFQFW 673
+H LQ G+ +N+ I+PEQMT EVWDY+F P PK T I L M++ F++W
Sbjct: 633 AHILQNGNIYGS-DNSY-IRPEQMTDEVWDYVFC-NGPAPK-TSIPSTVLTKMKQEFEYW 688
Query: 674 YPVDLRVSGKDLIQNHLTFYIYNHCAMWPNEEEKWPKGIRANGHLMLNSAKMSKSEGNFL 733
YP DLR+SGKDL+QNHL F I+NH + P + WP+G R N HL+LNS KMSKS GNF
Sbjct: 689 YPFDLRISGKDLMQNHLAFCIFNHTTLLP--KHHWPRGFRCNRHLLLNSEKMSKSTGNFR 746
Query: 734 TLSESIEKFSADGMRLTLADAGDSVEDANFVESTADAAILRLYTFIEWVKEVLASKSTLR 793
TL ++IE+FS+D R LAD GD ++D NFV TA++A LRL I W+KEV KS+ R
Sbjct: 747 TLRQAIEEFSSDATRFALADVGDGMDDENFVSETANSAALRLTKEISWMKEVFDDKSSFR 806
Query: 794 SG-DYNFHDKVFVSEMNIKILQTD 816
G + D+VF +E+N I T+
Sbjct: 807 LGPPSTYADRVFANEINFAIKDTE 830
>01_01_0124 -
1145105-1145320,1145480-1145611,1146485-1146562,
1147022-1147199,1147269-1147441,1147531-1147632,
1147717-1147794,1148178-1148259,1148343-1148405,
1150196-1150275,1150529-1150723,1150812-1151073,
1151566-1151720,1151799-1151865,1151956-1152179,
1152322-1152451,1153228-1153284,1153396-1153527,
1153758-1154086
Length = 910
Score = 48.8 bits (111), Expect = 3e-05
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 28 EIEKKVQERWESQKIFEVEAPDDGKSHEKFLC----TFPYPYMNGRLHLGHTFSLSKCEF 83
EIE + Q WE + F G K C FPYP G LH+GH + +
Sbjct: 69 EIEPRWQRHWEEHRTFRTPDIGHGLDTSKPKCYILDMFPYPSGAG-LHVGHPLGYTATDI 127
Query: 84 ACRYYRLKGRMVLFPFGFHCTGMP 107
R+ R++G VL P G+ G+P
Sbjct: 128 LSRFKRMQGFNVLHPMGWDAFGLP 151
Score = 46.8 bits (106), Expect = 1e-04
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 8/181 (4%)
Query: 714 ANGHLMLNSAKMSKSEGNFLTLSESIEKFSADGMRLTLADAGDSVEDANFVESTADAAIL 773
AN L + KMSKS GN + + + ++ AD +RL G + D+ ++ + I
Sbjct: 666 ANIRLNARAYKMSKSRGNVINPDDVVSEYGADSLRLYEMFMGP-LRDS---KTWSTGGIE 721
Query: 774 RLYTFIEWVKEVLASKSTLRSGDYNFHDKVFVSEMNIKILQTDDNYNRMLFKEALKSGFF 833
++ F+ ++ + L G Y V E + L+ + +E ++ F
Sbjct: 722 GVHRFLGRTWRLVVG-TPLPDGSYGVGTTVTDEEPTLDQLRVLHKCIARVTEEIQETRFN 780
Query: 834 ELQAARDKYRELCSEGGMHVELVTKYIEVQAKLMSPICPHVAEYVWELLGNKTSILHSRW 893
+A ++ + + V IE L+SP PH+AE +W LGN S+ H ++
Sbjct: 781 TAISAMMEFVNAAYKWDTQPKSV---IESFILLLSPFAPHMAEELWFRLGNSRSLAHEQF 837
Query: 894 P 894
P
Sbjct: 838 P 838
>07_01_0453 +
3420727-3420800,3421666-3421792,3422348-3422431,
3422550-3422644,3423063-3423154,3423326-3423379,
3424221-3424273,3424472-3424539,3424777-3424852,
3425159-3425242,3425793-3425941,3426375-3426492,
3426583-3426699,3426950-3427170,3427503-3427536,
3427585-3427685,3427832-3427943,3428379-3428504,
3428579-3428716,3428808-3428858,3428938-3429050,
3430253-3430318,3430582-3430729,3430826-3430930,
3431017-3431118,3431495-3431567,3431647-3431813,
3431906-3432028
Length = 956
Score = 48.4 bits (110), Expect = 3e-05
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 36 RWESQKIFEVEAPDDGKSHEKFLCTFPYPYMNGRLHLGHTFSLSKCEFACRYYRLKGRMV 95
+WESQ F+ P+ + + F+ P P + G LH+GH ++ + RY+R+KGR
Sbjct: 25 QWESQGFFK---PNFDRGGDPFVIPMPPPNVTGSLHMGHAMFVTLEDIMVRYFRMKGRPA 81
Query: 96 LFPFGFHCTGMPIKACADKL 115
L+ G G+ + +K+
Sbjct: 82 LWLPGTDHAGIATQLVVEKM 101
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 664 DLMRKSFQFWYPVDLRVSGKDLI---QNHLTFYIYNHCAMWPNEEEKWPKGIRANGHLML 720
DL + F+ +YP + +G D++ + P IR + +
Sbjct: 498 DLSSEDFKHFYPATVLETGHDILFFWVARMVMMGIEFTGTVPFSYVYLHGLIRDSEQVNF 557
Query: 721 NSAKMSKSEGNFLTLSESIEKFSADGMRLTLADAGDSVEDAN 762
KMSK+ GN + ++I+++ D +R TL+ G + +D N
Sbjct: 558 QGRKMSKTLGNVIDPLDTIKEYGTDALRFTLS-MGTAGQDLN 598
>02_01_0623 -
4676847-4676879,4676953-4677115,4677467-4677620,
4678413-4678554,4678641-4678706,4679389-4679922
Length = 363
Score = 43.6 bits (98), Expect = 0.001
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Query: 30 EKKVQERWESQKIFEVEAPDDGKSHEKFLCTFPYPYMNGRLHLGHTFSLSKCEFACRYYR 89
E++V WE F + E P P+ G H GH + S + R++
Sbjct: 16 EERVLRLWEELDAFHEQLRRTAGGEEFVFYDGP-PFATGLPHYGHLLAGSIKDAVARHHA 74
Query: 90 LKGRMVLFPFGFHCTGMPIKACADKLKR 117
++GR V FG+ C G+P++ D+ R
Sbjct: 75 MRGRHVARRFGWDCHGVPVERAVDEALR 102
>06_03_0921 +
25949453-25949986,25950150-25950188,25950380-25950445,
25950526-25950669,25951416-25951612,25952281-25952443,
25952760-25952873,25953304-25953401,25953964-25954042,
25954356-25954514,25954690-25954779,25955790-25955923,
25956513-25956672,25956826-25956909,25957000-25957167,
25957321-25957446,25958088-25958225,25958311-25958414,
25958832-25958895,25959229-25959317,25959393-25959534,
25959937-25960000,25960085-25960152,25960399-25960521,
25960604-25960669,25960857-25960962,25961076-25961167,
25961243-25961344
Length = 1170
Score = 40.3 bits (90), Expect = 0.009
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 30 EKKVQERWESQKIFEVEAPDDGKSHEKFLCTFPYPYMNGRLHLGHTFSLSKCEFACRYYR 89
E++V + W F E K E+F+ P+ G H GH + + + R+
Sbjct: 16 EERVLKLWSELDAFH-EQLRRTKGGEEFIFYDGPPFATGLPHYGHILAGTIKDVVTRHQS 74
Query: 90 LKGRMVLFPFGFHCTGMPIKACADK 114
++GR V FG+ C G+P++ DK
Sbjct: 75 MRGRHVSRRFGWDCHGLPVEFEIDK 99
Score = 30.3 bits (65), Expect = 9.8
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 710 KGIRANGHLMLNSAK-MSKSEGNFLTLSESIEKFSADGMRLTLADA 754
K + NG ++ K MSKS+ N+ + E I+++ AD +RL L ++
Sbjct: 624 KNLICNGLVLAEDGKKMSKSKKNYPSPVEVIDEYGADALRLYLINS 669
>03_05_0776 +
27625122-27625415,27627226-27627273,27627455-27627514,
27627633-27627802,27627901-27627973,27628096-27628161,
27628262-27628345,27628681-27628758,27629009-27629092,
27629835-27630137,27630227-27630397,27630971-27631161,
27631284-27631686,27632246-27632497,27632577-27633077,
27633181-27633278,27633400-27633499,27633722-27633867,
27633973-27634138
Length = 1095
Score = 40.3 bits (90), Expect = 0.009
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 29 IEKKVQERWESQKIFEVEAPDDGKSHEKFLCTFPYPYMNGRLHLGHTFSLSKCEFACRYY 88
+EK WES F +A S F+ P P + G LH+GH +++ + R+
Sbjct: 188 VEKSWYSWWESSGYFGADA---ASSKPPFVIVLPPPNVTGALHIGHALTVAIEDSMIRWR 244
Query: 89 RLKGRMVLFPFGFHCTGMPIKACAD-KLKRE 118
R+ G L+ G G+ + + KL RE
Sbjct: 245 RMSGYNTLWVPGVDHAGIATQVVVEKKLMRE 275
>10_08_0568 +
18837195-18837203,18837694-18837741,18837853-18837912,
18837986-18838155,18838297-18838369,18838529-18838594,
18838685-18838768,18838950-18839027,18839122-18839205,
18839562-18839641,18839791-18839848,18839933-18840235,
18840361-18840531,18840972-18841204,18841303-18841705,
18841961-18842212,18842293-18842790,18843073-18843170,
18843314-18843413,18843653-18843798,18843912-18844068
Length = 1056
Score = 39.5 bits (88), Expect = 0.016
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 29 IEKKVQERWESQKIFEVEAPDDGKSHEKFLCTFPYPYMNGRLHLGHTFSLSKCEFACRYY 88
+EK WES + F +A S F+ P P + G LH+GH +++ + R+
Sbjct: 93 VEKSWYSWWESSQYFVADATS---SKPPFVIILPPPNVTGVLHIGHAITVAIEDAMIRWR 149
Query: 89 RLKGRMVLFPFGFHCTGMPIKACADK 114
R+ G L+ G G+ + +K
Sbjct: 150 RMSGYNALWVPGMDHAGIATQVVVEK 175
>03_02_0919 -
12392471-12392636,12392740-12392931,12393366-12393463,
12393719-12394219,12394287-12394532,12395627-12396029,
12396155-12396348,12396755-12396925,12397064-12397366,
12397463-12397520,12397678-12397757,12398910-12398987,
12399530-12399613,12399692-12399757,12399908-12399980,
12400080-12400249,12400368-12400427,12400632-12400679,
12401217-12401255,12401364-12401372
Length = 1012
Score = 39.5 bits (88), Expect = 0.016
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 29 IEKKVQERWESQKIFEVEAPDDGKSHEKFLCTFPYPYMNGRLHLGHTFSLSKCEFACRYY 88
+EK WES F D + F+ P P + G LH+GH +++ + R+
Sbjct: 106 VEKSWYAWWESSGYFRA---DSASTKPPFVIVMPPPNVTGALHIGHALTVAIEDAMIRWR 162
Query: 89 RLKGRMVLFPFGFHCTGMPIKACAD-KLKRE 118
R+ G L+ G G+ + + KL RE
Sbjct: 163 RMSGYNALWVPGVDHAGIATQVVVEKKLMRE 193
>03_01_0304 -
2378657-2378704,2378790-2378795,2378860-2379039,
2379145-2379327,2379549-2379632,2379748-2379873,
2379964-2380245,2380326-2380496,2380828-2380989,
2381501-2381564,2382040-2382221
Length = 495
Score = 37.9 bits (84), Expect = 0.049
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 8/139 (5%)
Query: 677 DLRVSGKDLIQNHLTFYIYNHCAMWPNEEEK-WPKGIRANGHLMLNSAKMSKSEGNFLTL 735
D+ GKDLI H + A +P E K W NG + + KMSKS+ NF T+
Sbjct: 230 DIHGGGKDLIFPHHENELAQSRAAYPESEVKCWMH----NGFVNKDDQKMSKSDKNFFTI 285
Query: 736 SESIEKFSADGMRLTLADAGDSVEDANFVESTADAAILRLYTFIEWVKEVLASKSTLRSG 795
+ I+ + +R L D N + + A R+Y + + + S R G
Sbjct: 286 RDIIDLYHPMALRFFLMRT-HYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQYR-G 343
Query: 796 DYNFHDKVFVSEMNIKILQ 814
+ N V V E ++K+ Q
Sbjct: 344 E-NISVPVPVEEQDMKLQQ 361
>09_06_0243 -
21813223-21813456,21814266-21814367,21814501-21814701,
21815591-21815716,21815791-21816072,21816218-21816388,
21816838-21816999,21817404-21817467,21818136-21818503
Length = 569
Score = 34.3 bits (75), Expect = 0.60
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 677 DLRVSGKDLI-QNHLTFYIYNHCAMWPNEEEKWPKGIRANGHLMLNSAKMSKSEGNFLTL 735
D+ G+DLI +H + A + W NG + +NS KMSKS GNF+T+
Sbjct: 292 DIHGGGEDLIFPHHENEIAQSRAACCDSSINYWIH----NGFVNVNSQKMSKSLGNFVTI 347
Query: 736 SESIEKFSADGMRLTL 751
+ E + +R+ L
Sbjct: 348 RKVTELYHPLALRMFL 363
>01_01_1018 -
8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 31.5 bits (68), Expect = 4.2
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 490 KGSKIQDVKKNLQTKLIQEGKAVIYYEPEKTIISRSGDECVVALCNQWYLDYGNEEWKGQ 549
K K++ +NL K ++EG V+ + +EC + W N+ W G+
Sbjct: 845 KSDKLRSWYQNLVKKAVKEG-VVVERNTLYDFFLQPTNECKTNISAAWLPYCDNDFWPGE 903
Query: 550 AEKALE 555
AE+ LE
Sbjct: 904 AERLLE 909
>02_04_0632 + 24614659-24615528,24615636-24616133
Length = 455
Score = 31.1 bits (67), Expect = 5.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 380 YALPMLTIKEDKGTGIVTSVPSDSPDDYAAL 410
YALP+L + + G+ T+V D PD YA +
Sbjct: 120 YALPVLRLGDVPPGGVTTTVSIDDPDQYAVV 150
>03_01_0081 +
645214-645228,645791-645856,645973-646142,646265-646319,
646434-646499,646604-646687,647091-647168,647425-647508,
648000-648302,648402-648572,649098-649288,649406-649808,
650368-650619,650696-651196,651306-651403,651810-651911,
652016-652178
Length = 933
Score = 30.3 bits (65), Expect = 9.8
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 62 PYPYMNGRLHLGHTFSLSKCEFACRYYRLKGRMVLFPFGFHCTGMPIKACAD-KLKRE 118
P P + G LH+GH +++ + R+ R+ G L+ G G+ + + KL RE
Sbjct: 105 PPPNVTGALHIGHALTVAIEDAIIRWRRMSGYNALWVPGVDHAGIATQVVVEKKLMRE 162
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.135 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,937,353
Number of Sequences: 37544
Number of extensions: 1409479
Number of successful extensions: 3014
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2963
Number of HSP's gapped (non-prelim): 42
length of query: 1198
length of database: 14,793,348
effective HSP length: 90
effective length of query: 1108
effective length of database: 11,414,388
effective search space: 12647141904
effective search space used: 12647141904
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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