GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001036-TA|BGIBMGA001036-PA|undefined
         (325 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    28   0.081
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    26   0.43 
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    26   0.43 
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    26   0.43 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.57 
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    25   0.57 
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    24   1.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   1.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.0  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   3.0  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 28.3 bits (60), Expect = 0.081
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 5/111 (4%)

Query: 63  SDDKPAKQHKVGDKKPDIELENGSGTSESSTVVKIDTVNPIHALKLPKNITYYDSSDHSV 122
           SD+ P +     + +P    E+   T  S    +  T       K P++    + SD   
Sbjct: 388 SDEIPPEPVPTPEPQPTQTTES-EPTQASEQPTESSTTQKPQTTKTPES---GNESDGVC 443

Query: 123 LKELFLVKMPSDFYKFFDCLNTDDAIVKICSSVNLELIGPFELLLGKLPQL 173
            KE  +V+ PSD   ++ C++    +V I    N  L+   EL +   PQ+
Sbjct: 444 TKE-GIVRDPSDCSVYYTCVSDGSKLVSIQRKCNHGLVYDLELNICNYPQV 493


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 78  PDIELENGSGTSESSTVVKIDTVNPIHALKLPKNITYYDSS 118
           PD+E+   +G  +    +K    N IH    P N+T +  S
Sbjct: 152 PDLEVPGNAGLKDMVMALKWVQENVIHFCGDPNNVTIFGES 192


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 78  PDIELENGSGTSESSTVVKIDTVNPIHALKLPKNITYYDSS 118
           PD+E+   +G  +    +K    N IH    P N+T +  S
Sbjct: 152 PDLEVPGNAGLKDMVMALKWVQENVIHFCGDPNNVTIFGES 192


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 78  PDIELENGSGTSESSTVVKIDTVNPIHALKLPKNITYYDSS 118
           PD+E+   +G  +    +K    N IH    P N+T +  S
Sbjct: 151 PDLEVPGNAGLKDMVMALKWVQENVIHFCGDPNNVTIFGES 191


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 5/83 (6%)

Query: 230 LFDKLQAAKTQSEKDNLLSDLQPIITYASIAMDECDFGTGVEMGINLFCSGLKELESNVL 289
           L +K++A KT  +  + L  L  +       ++  +   G ++ +  F SGL     NV+
Sbjct: 595 LNEKVEAIKTSPKMRHELQKLAQVYRILGETIETWNKLFGYQILLITFQSGL-----NVV 649

Query: 290 GCICPAYNLLNRGEFSKIIQGCS 312
            CI     +L+RG F   I  C+
Sbjct: 650 SCINFPLGVLDRGNFDIEIALCN 672


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 78  PDIELENGSGTSESSTVVKIDTVNPIHALKLPKNITYYDSS 118
           PD+E+   +G  +    +K    N IH    P N+T +  S
Sbjct: 152 PDLEVPGNAGLKDMVLALKWVQENIIHFCGDPNNVTIFGES 192


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 78  PDIELENGSGTSESSTVVKIDTVNPIHALKLPKNITYYDSS 118
           PD+E+   +G  +    +K    N IH    P N+T +  S
Sbjct: 152 PDLEVPGNAGLKDMVLDLKWVQENIIHFCGDPNNVTIFGES 192


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)

Query: 71  HKVGDKKPDIELENGSG 87
           H  GD KPD  L NG G
Sbjct: 236 HNDGDNKPDTILVNGFG 252


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 141 CLNTDDAIVKICSSVNLELIGPFELLLGKLPQLD 174
           C+ + D +  +C SVN  + G F +++G L Q +
Sbjct: 516 CIRSHDKLCDVCDSVN-RIFG-FIIIIGCLIQFN 547


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/52 (21%), Positives = 25/52 (48%)

Query: 76  KKPDIELENGSGTSESSTVVKIDTVNPIHALKLPKNITYYDSSDHSVLKELF 127
           K+  + LE+G  +++S    K+    PI  +       + + + + VLK ++
Sbjct: 17  KRRSVFLESGVNSADSFKASKVGPAPPIKFINKSSTDKFGNGAIYEVLKPIY 68


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.136    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,946
Number of Sequences: 317
Number of extensions: 3970
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 10
length of query: 325
length of database: 114,650
effective HSP length: 57
effective length of query: 268
effective length of database: 96,581
effective search space: 25883708
effective search space used: 25883708
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 43 (21.4 bits)