Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001036-TA|BGIBMGA001036-PA|undefined
(325 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 30 0.39
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 29 0.90
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 29 0.90
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 28 1.6
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 28 1.6
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 28 1.6
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 27 2.7
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 27 3.6
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 27 3.6
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 27 3.6
SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 4.8
SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 27 4.8
SPAC12G12.02 ||SPAC630.01c|rRNA processing protein, unnamed|Schi... 26 6.3
SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.4
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 26 8.4
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 8.4
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 30.3 bits (65), Expect = 0.39
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 2 SEACNSNAEDSRTVCKYGEKCYQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPY 61
++A +AE+S+ + +K + K + G++ EKK +K+ + KR +
Sbjct: 431 TDAVTKDAEESQEDVEMDIVIEKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEE 490
Query: 62 SSDDKPAKQHKVGDKKPD 79
S D + K+ K K D
Sbjct: 491 SEDGESPKKKKKSKKSKD 508
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 29.1 bits (62), Expect = 0.90
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 189 PPEFQAVLKIKGKSEYHIGYFRDDPNDEPVFLASND 224
P FQ L+IKG + YH G+ + P +++D
Sbjct: 32 PRSFQIQLRIKGYAVYHHGFLSSPSHKHPTTASASD 67
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 29.1 bits (62), Expect = 0.90
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 37 GQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPDIELENGSGTSESSTVVK 96
G+ +KK + +L+EK+F P S KP K H V D+E+EN E S V
Sbjct: 1090 GELVVSKKKKKDLIVELKEKKFQPIS---KPKKGHLV-----DLEVENALAEEEQSGDVS 1141
Query: 97 ID 98
D
Sbjct: 1142 QD 1143
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 6 NSNAEDSRTVCKYGEKCYQKNPE---HHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYS 62
NSN + R+ + ++ Y + + Y+ + E+ + + R +RF+ Y
Sbjct: 331 NSNRDRKRSSSRSDDREYHRRSDGRYDRSNYRDDYRHRRKERDHRDDQSSFRNERFSNYY 390
Query: 63 SDDKP-AKQHKVGDKKPDIELENGS 86
DD+ K+ G+K D L + S
Sbjct: 391 GDDRSYHKRRNTGNKNCDDHLRDKS 415
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 44 KKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPDIELEN---GSGTSESSTVVKIDTV 100
KK++ +++EKR P +D K A++ + + E EN TS S ++D
Sbjct: 9 KKHQSGNEEVKEKRQKPLKNDKKIAEELPQDEDDYEQEEENEDADQNTSVESESEELDNE 68
Query: 101 NPIHALKLPKNITYYDSSDHSVLKELFL 128
N ++ N+ +SD +L L
Sbjct: 69 NEDERVQKSVNLNASSTSDIEKFSDLQL 96
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 43 EKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPDIELENGSGTSESSTVVKIDTV-N 101
+ ++K+PGKL K S P + K + P ++E + S+ S ++ +DT+ N
Sbjct: 514 DNSSQKSPGKLSSKGLLNSFSPISPFSKSKSHNHHPSSQVEKSTSNSKGS-MLPLDTLYN 572
Query: 102 PIHALKLPKNITYY 115
+ +L +++ Y
Sbjct: 573 NKLSFRLDESLVRY 586
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 27.5 bits (58), Expect = 2.7
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 110 KNITYYDSSDHSVLKELFLVKMPSDFYKFFDCLNTDDAIVKICSSVNLELIGPFELLLGK 169
++I+ SS++++ L PSD F D L + K SS ++ L K
Sbjct: 94 EDISIGTSSENAIPFVLRTFIQPSD--SFLDLLAKVCDLEKEGSSDAVDFSDLINFLNAK 151
Query: 170 LPQLDDKELYLVHWRFFYDP 189
L + DD LVH RF+ P
Sbjct: 152 LSKKDDPRKTLVHLRFYNAP 171
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 66 KPAKQHKVGDKKPDIELENGSGTSESSTVVKIDT--VNPIHALKLPKNITYYDSSD 119
KP + K D+E+E +G E++ ++ DT V I K DSSD
Sbjct: 41 KPVAKETTVLTKKDVEVEEANGVEEAAETIESDTKEVQNIKPKSKKKKKKLNDSSD 96
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 229 KLFDKLQAAKTQSEKDNLLSDLQPIITYASIAMDECDF 266
KL +LQ K+++ DN L++L+ ++ A +D+ +F
Sbjct: 581 KLERRLQIDKSKAAHDNALNELETLLYRAQAMVDDDEF 618
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 119 DHSVLKELFLVKMPSDFYKFFDCLNTDDAIVKICSSVNLELIGPFELLLGKLPQLDD 175
D + + EL + K ++F K N DD +++ N++++ P +L L LD+
Sbjct: 57 DENKVNELDVHKQSTEFSKQESASNDDDTNIQLIPENNMKIVVPALILTLFLAALDN 113
>SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 416
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 87 GTSESSTVVKIDTVNPIHALKLPKNITYYDSSDHSVLKELF 127
G S SST V+ DT N + ++ PK T Y S K ++
Sbjct: 24 GCSASSTSVQSDTTNQV-SVSCPKYTTIYTSGTSPDTKTIY 63
>SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 416
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 87 GTSESSTVVKIDTVNPIHALKLPKNITYYDSSDHSVLKELF 127
G S SST V+ DT N + ++ PK T Y S K ++
Sbjct: 24 GCSASSTSVQSDTTNQV-SVSCPKYTTIYTSGTSPDTKTIY 63
>SPAC12G12.02 ||SPAC630.01c|rRNA processing protein,
unnamed|Schizosaccharomyces pombe|chr 1|||Manual
Length = 183
Score = 26.2 bits (55), Expect = 6.3
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 6 NSNAEDSRTVCKYGEKCYQKNPEHHKK--YKHPGQAGAFEKKNEKNPGKLREKRFNPYSS 63
N E R + E+ EH K+ ++ + FE+K + K EK +
Sbjct: 31 NIRVEHERALLGLQEQLSMAQLEHKKQKIFERYKKVRFFERKKAERRIKQLEKSLKDETM 90
Query: 64 DDKPAKQHKVGDKKPDIEL 82
DD+ KQ + +K I+L
Sbjct: 91 DDEKRKQCEKSMRKCQIDL 109
>SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 455
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 43 EKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPDIELENGSGTSESSTVVKIDTVN 101
E+KNEKNP + + ++ +QH ++ + +ES+T ++ +N
Sbjct: 62 EEKNEKNPIEEANEENESVAATSNERQQHDASNQPSQAAQTTINKNTESATPKTVNEIN 120
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 118 SDHSVLKELFLVKMPSDFYKFFDCLNTDDAIVKI 151
+D +L + + S +Y+F++C T DA +++
Sbjct: 881 ADDKLLLPVSWYNLGSSYYRFYECDTTKDATLQV 914
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 25.8 bits (54), Expect = 8.4
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 37 GQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPDIELENGSGTSESSTVVK 96
G +G +++ L + R +P S +P +Q + K + E +N T + T
Sbjct: 66 GMSGDAKEQESATLVHLTKGRAHPRSR--RPPRQISIDSAKKE-ETKNTGSTKAADTKSS 122
Query: 97 ID-TVNPIHALKLPKNITYY 115
++ T++P+ K P N + +
Sbjct: 123 VEATISPLKDTKSPSNASVF 142
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.136 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,713,127
Number of Sequences: 5004
Number of extensions: 81732
Number of successful extensions: 232
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 223
Number of HSP's gapped (non-prelim): 18
length of query: 325
length of database: 2,362,478
effective HSP length: 73
effective length of query: 252
effective length of database: 1,997,186
effective search space: 503290872
effective search space used: 503290872
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)
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