Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001036-TA|BGIBMGA001036-PA|undefined
(325 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56139| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 9e-15
SB_29191| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 5e-14
SB_52003| Best HMM Match : BTB (HMM E-Value=1e-16) 52 5e-07
SB_22259| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_41180| Best HMM Match : DUF229 (HMM E-Value=0) 34 0.18
SB_18784| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.73
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 31 1.3
SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10) 31 1.3
SB_3578| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_8086| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94) 31 1.7
SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24) 30 2.2
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 29 3.9
SB_28059| Best HMM Match : DUF149 (HMM E-Value=0.71) 29 3.9
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 29 3.9
SB_2588| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_991| Best HMM Match : UCH (HMM E-Value=1.2) 29 3.9
SB_34061| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_24946| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_13591| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_47281| Best HMM Match : Adaptin_N (HMM E-Value=0) 29 6.8
SB_38349| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 28 9.0
SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05) 28 9.0
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 9.0
SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034) 28 9.0
>SB_56139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 78.2 bits (184), Expect = 9e-15
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 117 SSDHSVLKELFLVKMPSDFYKFFD-C--LNTDDAIVKICSSVNLELIGPFELLLGKLPQL 173
SS +KE+F MP DFY F+ C LN + + ++ L+L+GP+++L GKL L
Sbjct: 29 SSAIKKIKEMFDAVMPEDFYDFWAFCEELNPKNPEDALMDTMGLQLVGPYDVLTGKLDGL 88
Query: 174 DDKELYLVHWRFFYDPPEFQAVLKIKGKSEYHIGYF 209
+ +L HWR++YDPPEF V++ +HIGY+
Sbjct: 89 SESSYHL-HWRYYYDPPEFMTVIRGNEDQGFHIGYY 123
>SB_29191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 75.8 bits (178), Expect = 5e-14
Identities = 34/90 (37%), Positives = 55/90 (61%)
Query: 220 LASNDINLKKLFDKLQAAKTQSEKDNLLSDLQPIITYASIAMDECDFGTGVEMGINLFCS 279
L D LKK+ + ++ +S KD +LQ ++T+ A DE D+G G+E+G++LFC
Sbjct: 324 LTVTDAELKKMLKTITESENKSAKDKASDELQELLTFVQFANDEGDYGMGLELGLDLFCF 383
Query: 280 GLKELESNVLGCICPAYNLLNRGEFSKIIQ 309
G K+ + +L + AY LL R +++KIIQ
Sbjct: 384 GSKQFHNTILQLLPLAYQLLGREKYAKIIQ 413
Score = 64.9 bits (151), Expect = 8e-11
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 11/95 (11%)
Query: 154 SVNLELIGPFELLLGKLPQLDDKELYLVHWRFFYDPPEFQAVLKIKGKSEYHIGYFRDDP 213
++ L+L+GP+++L GKL L + +L HWR++YDPPEF V++ +HIGY+
Sbjct: 194 TMGLQLVGPYDVLTGKLDGLSESSYHL-HWRYYYDPPEFMTVIRGNEDQGFHIGYYSTCI 252
Query: 214 NDEPVFLASNDINLKKLFDKLQAAKTQSEKDNLLS 248
+ NLKK+ DK Q + + + +L++
Sbjct: 253 TE----------NLKKIKDKSQQSSLKKMQTSLIT 277
Score = 53.2 bits (122), Expect = 3e-07
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 224 DINLKKLFDKLQAAKTQSEKDNLLSDLQPIITYASIAMDECDFGTGVEMGINLFCSGLKE 283
+ LKK+ + + +S KD +LQ ++T+ A DE D+G G+E+G++LFC G
Sbjct: 132 EAELKKMLKTITESDNKSAKDKASDELQELLTFVQFANDEGDYGMGLELGLDLFCFGNAF 191
Query: 284 LESNVLGCICPAYNLL 299
+++ L + P Y++L
Sbjct: 192 MDTMGLQLVGP-YDVL 206
>SB_52003| Best HMM Match : BTB (HMM E-Value=1e-16)
Length = 501
Score = 52.4 bits (120), Expect = 5e-07
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 1 MSEACNSNAEDSRTVCKYGEKCYQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNP 60
MSE ++D + +CKYG KCY+KNP H ++Y+H FE K GK K NP
Sbjct: 28 MSEGKRKRSKDEKPLCKYGSKCYRKNPVHMEEYRHLSDT-FFE--TIKKQGKYMWK--NP 82
Query: 61 YSSD 64
Y SD
Sbjct: 83 YLSD 86
>SB_22259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 41.9 bits (94), Expect = 7e-04
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 9 AEDSRTVCKYGEKCYQKNPEHHKKYKHP 36
++ + VC YG KCYQ NP+H K + HP
Sbjct: 295 SDRKKKVCMYGSKCYQTNPDHMKNFLHP 322
>SB_41180| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 721
Score = 33.9 bits (74), Expect = 0.18
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 43 EKKNEKNPG-KLREKRFNPYSSDDKPAKQHKVGDKKPDIELENGSG 87
+ K +K PG +++KR + +DD+P H V DK+P ++ GSG
Sbjct: 58 QTKEDKRPGLPVKDKRPDKQVTDDRPG--HLVEDKRPGQPIDEGSG 101
>SB_18784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 31.9 bits (69), Expect = 0.73
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 251 QPIITYASIAMDECDFGTGVEMGINLFCSGLKELESNVLGCICPAYNLLNRGEFSKIIQG 310
+P + S+ DE D+ G+ L+ +++ G + LLN E IIQ
Sbjct: 223 KPFLEKISVPKDEIDYICS-NSGLYLWEKVMEQFSRKTNGQVATLVKLLNELEREDIIQE 281
Query: 311 CSASWDSGKALRR 323
C W GK +R
Sbjct: 282 CIYKWLDGKIEKR 294
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 43 EKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPDIELENGSGTSESS 92
EKK++K K+ EK+ + DDK + K DKK D + SG SE S
Sbjct: 159 EKKDDKK--KVDEKKEDEKKDDDKKVDEKKEDDKKND---SSASGESEDS 203
>SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10)
Length = 260
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 19 GEKCYQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKP 78
G K + K E HK +K A EKK EK K + F+P++ DD P K KP
Sbjct: 189 GSKEFPK--ESHKPFKVKKDKKA-EKKAEKKEEKPADDDFDPFAEDDTPKAAPK---PKP 242
Query: 79 DIELENGSGTSESSTV 94
+ + + ++S V
Sbjct: 243 EPKAKKAKPAAKSIVV 258
>SB_3578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 20 EKCYQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNP 60
+K Y K + KK K+P +KKN KN K+ E NP
Sbjct: 246 KKDYGKKKNYSKKKKNPKNNKYNKKKNRKNSKKINECASNP 286
>SB_8086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 50 PGKLREKRFNPYSSDDKPAKQHKVGDKKPDIELENGSGTSESSTVVKIDTVNPIHALKLP 109
PG ++ +P+S +K D K D+E++ S T VK+ T P LK+P
Sbjct: 17 PGNIQPTSIHPFSFP-----LYKSPDIKDDLEVDALGTLSVQPTAVKVKTHIPYLTLKVP 71
Query: 110 KNITYYDSSDHSVLK 124
+ HSV +
Sbjct: 72 QQYHLLGYKPHSVAR 86
>SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1181
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 50 PGKLREKRFNPYSSDDKPAKQHKVGDKKPDIELENGSGTSESSTVVKIDTVNPIHALKLP 109
PG ++ +P+S +K D K D+E++ S T VK+ T P LK+P
Sbjct: 14 PGNIQPTSIHPFSFP-----LYKSPDIKDDLEVDALGTLSVQPTAVKVKTHIPYLTLKVP 68
Query: 110 KNITYYDSSDHSVLK 124
+ HSV +
Sbjct: 69 QQYHLLGYKPHSVAR 83
>SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94)
Length = 1058
Score = 30.7 bits (66), Expect = 1.7
Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 4/122 (3%)
Query: 7 SNAEDSRTVCKYGEKCYQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDK 66
SN+E + V + +K P + K +KK+ N +K N SD K
Sbjct: 816 SNSEKKKEVATAPTE-KKKLPTAPNEKKKDANVIITDKKDNANVAVSDKKEANFNVSDKK 874
Query: 67 PAKQHKVGDKKPDIELENGSG---TSESSTVVKIDTVNPIHALKLPKNITYYDSSDHSVL 123
DK D+++ SG TS ++T+ K NP N T + + +
Sbjct: 875 KEADTNASDKNKDVDVITTSGDVATSANATLNKTKETNPSSVETNVPNDTITEKEEQKTI 934
Query: 124 KE 125
E
Sbjct: 935 NE 936
>SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24)
Length = 324
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 45 KNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPDIELENGSGTSESSTVVKIDTVNPIH 104
K+ K K REK+ P +K K+ K+P+ + +++ +++ I
Sbjct: 74 KSAKKERKPREKKEKPKEKQEKKPKKASSEKKEPEEVTAKDQAPTPQASLEEVEPPKDIP 133
Query: 105 ALKLP----KNITYYDSSDHSVLKELFLVKMPSD 134
L P K I Y S ++L +L K P+D
Sbjct: 134 PLPPPVPKEKPIVAYLKSLRNILDKLHEYKWPAD 167
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 23 YQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPDIEL 82
++ +HH +KH G+ + + K +K+ P ++P + + G +K +
Sbjct: 1774 HEDTTQHHDHHKHRGKNAKDSESKGTSKHKDGDKKQQPKPQRERPPRFER-GKRKAPADE 1832
Query: 83 ENGSGTSESST 93
E+ G+ E++T
Sbjct: 1833 ESKKGSVENNT 1843
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 192 FQAVLKIKGKSEYHIGYFRDDPNDE---PVFLASNDINLKKLFDKLQAAKTQSEKD 244
F+ LK+KG+S+ G D+P +E P+F + K F ++ + +SE++
Sbjct: 1570 FKITLKLKGESDDDSGLHVDEPPEEMNDPLFGKKKKLTFKGKFSDKKSKEDKSEEE 1625
>SB_28059| Best HMM Match : DUF149 (HMM E-Value=0.71)
Length = 1043
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 192 FQAVLKIKGKSEYHIGYFRDDPNDE---PVFLASNDINLKKLFDKLQAAKTQSEKD 244
F+ LK+KG+S+ G D+P +E P+F + K F ++ + +SE++
Sbjct: 484 FKITLKLKGESDDDSGLHVDEPPEEMNDPLFGKKKKLTFKGKFSDKKSKEDKSEEE 539
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 20 EKCYQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQ 70
E+ Q E+ K+Y+ Q +KK + KLRE N +DD+ ++
Sbjct: 717 EEIKQMGEENEKRYEEEKQKIEDDKKRWEEERKLREDEINQMFNDDQEKRE 767
>SB_2588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 60 PYSSDDKPAKQHKVGDKKPDIELENGSGTSESSTVVKIDTVNPIHALKLPKNITY 114
PY+SD ++ + PD++ +NGS TS S ++ I + + + P ITY
Sbjct: 228 PYTSDGVARREQ--ANASPDMDSDNGSVTSSSQSLNSIHSNSSVTV--TPSEITY 278
>SB_991| Best HMM Match : UCH (HMM E-Value=1.2)
Length = 226
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 60 PYSSDDKPAKQHKVGDKKPDIELENGSGTSESSTVVKIDTVNPIHALKLPKNITY 114
PY+SD ++ + PD++ +NGS TS S ++ I + + + P ITY
Sbjct: 3 PYTSDGVARREQ--ANASPDMDSDNGSVTSSSQSLNSIHSNSSVTV--TPSEITY 53
>SB_34061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 162 PFELLLGKLPQLDDKELYLVHWRFFYDPPEFQAVLKIKGKSEYHIGYFRDDPNDEPV 218
P L+LGK+ + +D L WR F + K KS+ +GY R+ P+
Sbjct: 161 PLTLILGKMIRWEDHVLRF--WRRHLSKLSFMSFFLPKLKSDSDVGYMREPAEATPL 215
>SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 28.7 bits (61), Expect = 6.8
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Query: 10 EDSRTVCKYGEKCYQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAK 69
++ T C+ G + +++P K + EK+ E R+K S + K
Sbjct: 427 KEKETGCQVGSQSEEEDPVVAKSEDEVKEEATEEKRTESEEAPKRKKSLKRRLSFSRKNK 486
Query: 70 QHKVGDKKPDIELENGSGTSESSTV-VKIDTVNPIHA 105
K ++K D E E GT + + V K + VN A
Sbjct: 487 AKKT-EEKQDEEGEAREGTMDDNEVSQKPELVNQSEA 522
>SB_24946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 822
Score = 28.7 bits (61), Expect = 6.8
Identities = 38/133 (28%), Positives = 50/133 (37%), Gaps = 12/133 (9%)
Query: 21 KCYQKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDD-KPAKQHK-VGDKKP 78
+C K + K K + G EK+NEK K EKR D + KQ++ + P
Sbjct: 94 ECRNKQKQDQKNGKEVPEKGGEEKENEKE--KENEKRTEKAKEKDVQVTKQNESINPDSP 151
Query: 79 DIELENGSGTSESSTV-----VKIDTVNPIHALKLPKNITYYDSSDHSVLKELFLVKMPS 133
L S ST +K TV P + SS S L ELF +
Sbjct: 152 FSTLVKMSTGKNPSTFQLPPELKCTTVFPGDRKRKGSTEDKGSSSKSSKLTELFGKLVQC 211
Query: 134 DFYKF---FDCLN 143
DF DC+N
Sbjct: 212 DFCPLGFHMDCIN 224
>SB_13591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 25 KNPEHHKKYKHPGQAGAFEKKNEKNPGKLR--EKRFNPYSSDDKPAKQHKVGDKKPDIEL 82
K +H+K H G++ KK++ P +L E P + D++P + + D + D
Sbjct: 2 KQNRNHEKCVHNGKSETRSKKSDVQPMELEDMENPRRPEAKDEEPTLEKDI-DIQRDAPR 60
Query: 83 ENGSGTSESSTVVKIDTV 100
+ + S V++D V
Sbjct: 61 NDENKVSWQDVSVRVDRV 78
>SB_47281| Best HMM Match : Adaptin_N (HMM E-Value=0)
Length = 949
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 38 QAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPDIEL 82
++ K +K P ++E+ P S DKP +V + P +++
Sbjct: 635 ESSILAKLKKKKPNAVKERDEKPTDSSDKPTTNGQVSNAAPQVKV 679
>SB_38349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 25 KNPEHHKKYKHPGQAGAFEKKNEKNPGKLR--EKRFNPYSSDDKPAKQHKVGDKKPDIEL 82
K +H+K H G++ KK++ P +L E P + D++P + + D + D
Sbjct: 2 KQNRNHEKCVHNGKSETRSKKSDVQPMELEDMENPRRPEAKDEEPTLEKDI-DIQRDAPR 60
Query: 83 ENGSGTSESSTVVKIDTV 100
+ + S V++D V
Sbjct: 61 NDENKVSWQDVSVRVDRV 78
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 28.3 bits (60), Expect = 9.0
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 24 QKNPEHHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPDIELE 83
+KN + G A A +KK E+ GK R K ++ + ++ + ELE
Sbjct: 519 EKNETQSLFFFQQGSAEA-KKKREEKEGKKRRKEGVKECKGEEEQNKTDSSSEESEDELE 577
Query: 84 NGSGTSESSTVVKIDTVNPIHALKLPKNITYYDSSDH 120
+S S + D + H K K+ D+S+H
Sbjct: 578 TSDDSSSSESDTSDDESDDDH--KSEKSSIATDTSEH 612
>SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05)
Length = 720
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 29 HHKKYKHPGQAGAFEKKNEKNPGKLREKRF------------NPYSSDDKPAKQHKVGDK 76
HHK +KH G + + K+ GK R + N + +KP K HK K
Sbjct: 126 HHKHHKHMGTSHRIPSRERKSHGKKRLNKHKKASHTRRNNHKNSRRTHNKPGKNHKSATK 185
Query: 77 K 77
K
Sbjct: 186 K 186
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 28.3 bits (60), Expect = 9.0
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 43 EKKNEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKPDIELENGSGT-SESSTVVKID 98
E+K E NP +L+E + S DD+ AK V + IE+EN + ++ V +ID
Sbjct: 110 EEKAESNPAQLKEGDSDSASDDDEEAKPTGV---QALIEIENPNRVLQKTKKVTEID 163
>SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034)
Length = 605
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 46 NEKNPGKLREKRFNPYSSDDKPAKQHKVGDKKP 78
N+ N G LRE + + + DKPA Q K KP
Sbjct: 318 NKANHGTLREWQLILHGTKDKPAHQQKEHPDKP 350
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.136 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,173,891
Number of Sequences: 59808
Number of extensions: 545063
Number of successful extensions: 1342
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1315
Number of HSP's gapped (non-prelim): 42
length of query: 325
length of database: 16,821,457
effective HSP length: 82
effective length of query: 243
effective length of database: 11,917,201
effective search space: 2895879843
effective search space used: 2895879843
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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