Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001035-TA|BGIBMGA001035-PA|IPR000644|CBS, IPR001093|IMP
dehydrogenase/GMP reductase, IPR005990|IMP dehydrogenase
(512 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces ... 603 e-173
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 40 0.001
SPBC800.07c |tsf1||mitochondrial translation elongation factor E... 31 0.29
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 31 0.29
SPAPB1A11.03 |||FMN dependent dehydrogenase|Schizosaccharomyces ... 29 1.2
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 28 2.7
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 28 3.6
SPBC31F10.17c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 28 3.6
SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces po... 27 4.7
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 27 4.7
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 27 6.2
SPAC23G3.09 |taf4||transcription factor TFIID complex subunit Ta... 27 8.2
SPCC330.05c |ura4||orotidine 5'-phosphate decarboxylase Ura4 |Sc... 27 8.2
SPAC977.14c |||aldo/keto reductase, unknown biological role|Schi... 27 8.2
>SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 524
Score = 603 bits (1490), Expect = e-173
Identities = 297/507 (58%), Positives = 380/507 (74%), Gaps = 6/507 (1%)
Query: 10 RDGLSAEDTFANS--EGLTYNDFLLLPGYIDFTAEEVDLTSPLTKKILLKAPLVSTPMDT 67
+DGLS +D ++ GLT+NDFL+LPGYIDF V L + +++ I+LK P +S+PMDT
Sbjct: 20 KDGLSIDDLIRHNFQGGLTFNDFLILPGYIDFVPNNVSLETRISRNIVLKTPFMSSPMDT 79
Query: 68 VTEADMAISMALCGGIGIIHHNCTPEYQANEVHKVKKYKHGFIRDPVCMGPENTVADVLE 127
VTE MAI MAL GGIG+IHHNCTPE QA V KVKKY++GFI DPV P++TV DVL+
Sbjct: 80 VTEDQMAIYMALLGGIGVIHHNCTPEEQAAMVRKVKKYENGFILDPVVFSPQHTVGDVLK 139
Query: 128 AKKKNGFTGYPITQNGKLGGRLIGIVTSRDIDFREGDPHLSLKEVMTPINDMITAQLGVT 187
K+ GF+G PIT+NGKL G+L+GIVTSRD+ F + D + + EVMTP ++IT G++
Sbjct: 140 IKETKGFSGIPITENGKLRGKLVGIVTSRDVQFHK-DTNTPVTEVMTPREELITTAEGIS 198
Query: 188 LQDANYILEKSKKGKLPIINNDGELVALIARTDLKKARSYPNASKDSN-KQLLVGAAIGT 246
L+ AN +L KSKKGKLP+++ D LVAL++ TDL K +P ASK S+ KQL+V AAIGT
Sbjct: 199 LERANEMLRKSKKGKLPVVDKDDNLVALLSLTDLMKNLHFPLASKTSDTKQLMVAAAIGT 258
Query: 247 RDTDRERLKLLVNNGVDVIVLDSSQGNSTYQIKMIKYIKETYPEIQVVGGNVVTRMQAKN 306
RD DR RL LL G+D +V+DSSQGNS +QI+MIK+IK+TYP+I V+ GNVVTR Q +
Sbjct: 259 RDDDRTRLALLAEAGLDAVVIDSSQGNSCFQIEMIKWIKKTYPKIDVIAGNVVTREQTAS 318
Query: 307 LIDAGVDALRVGMGSGSICITQEVMACGCPQATAVYQVASYARHFNVPVIADGGIQSVGH 366
LI AG D LRVGMGSGS CITQEVMACG PQATA+ QVA +A F + VIADGGIQ+VGH
Sbjct: 319 LIAAGADGLRVGMGSGSACITQEVMACGRPQATAIAQVAEFASQFGIGVIADGGIQNVGH 378
Query: 367 IIKSLALGASTVMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMESKD-GKGSAMS 425
++KSL+LGA+ VMMG LLAGT+E+PGEY+ +G R K YRGMGS+ AME K ++
Sbjct: 379 MVKSLSLGATAVMMGGLLAGTTESPGEYYVREGQRYKSYRGMGSIAAMEGTGVNKNASTG 438
Query: 426 RYFHKESDKHRVAQGVSGSIVDKGSVLRFLPYLQAGMQHSCQDLGARSVSVLREMSHSGD 485
RYF E+D RVAQGVSG +VDKGS+LRFLPYL G+QH+ QD+G +S+ L E +
Sbjct: 439 RYF-SENDAVRVAQGVSGLVVDKGSLLRFLPYLYTGLQHALQDIGTKSLDELHEAVDKHE 497
Query: 486 LRFMKRTYSAQLEGNVHGLFSYEKRLF 512
+RF R+ +A EG++ G +YEKRL+
Sbjct: 498 VRFELRSSAAIREGDIQGFATYEKRLY 524
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 730
Score = 39.5 bits (88), Expect = 0.001
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 12/160 (7%)
Query: 112 DPVCMGPENTVADVLEAKKKNGFTGYPITQNGKLGGRLIGIVTSRDIDFR---EG-DPH- 166
+P +G TVA+ E+ ++G + + NG + G+ T+ D+ R G DP+
Sbjct: 266 EPFLVGTRTTVAEATESMARSGVSAVLVMDNGAVS----GVFTAHDVVLRVLAAGLDPYR 321
Query: 167 LSLKEVMTPINDMITAQLGVTLQDANYILEKSKKGKLPIINNDGELVALIARTDLKKA-R 225
S+ VMTP D A L V+ I + K LP+++ ++ +++ L A
Sbjct: 322 SSVIRVMTPHPDCALASLRVSTALERMI--EGKFSNLPVVDESDAIIGMLSLFHLATAIE 379
Query: 226 SYPNASKDSNKQLLVGAAIGTRDTDRERLKLLVNNGVDVI 265
P ++ Q A I + ++ + L+ N +V+
Sbjct: 380 QTPEEEEEVFDQAENDAGIEPSNGFEDQQQQLLGNSNEVV 419
>SPBC800.07c |tsf1||mitochondrial translation elongation factor
EF-Ts Tsf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 299
Score = 31.5 bits (68), Expect = 0.29
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 220 DLKKARSYPNASKDSNKQLLVGAAIGTRDTDRERLK 255
D+KK RS NAS D KQ + A +G + RE LK
Sbjct: 36 DIKKLRSETNASMDLVKQSVEEAGVGNLELAREILK 71
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 31.5 bits (68), Expect = 0.29
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 97 NEVHKVKKYKHGFIRDPVCMGPENTVADVLEAKKKNGFTGYPITQNGKLGGRLIGIVT 154
+E V+ H + RD +C+ E ++ E K NGF G PI + +LI +T
Sbjct: 757 DEYCMVQYTDHFYFRDHLCVATELLGKNLYELIKSNGFKGLPIVVIKSITRQLIQCLT 814
>SPAPB1A11.03 |||FMN dependent dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 407
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 355 VIADGGIQSVGHIIKSLALGASTVMMG 381
V+ D G++S I K+LALGA V++G
Sbjct: 329 VLFDSGVRSGADIAKALALGAKMVLIG 355
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 28.3 bits (60), Expect = 2.7
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 148 RLIGIVTSRDI-DFREGDPHLSLKEVMTPINDMITAQLGVTLQDANYILEKSKKGKLPII 206
R GIV S DI + D L LKE+ D+ L TL E +KK L I
Sbjct: 283 RSTGIVNSEDIKELSVEDDSLELKEITPEALDIGQTSLFTTLNQTQVKKEDNKKFLLKEI 342
Query: 207 N 207
N
Sbjct: 343 N 343
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 27.9 bits (59), Expect = 3.6
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Query: 207 NNDGELVALIARTDLKKARSYPNASKDSNKQLLVGAAIGTRDTDR-ERLKLLVNNGVDVI 265
+ D + L A + S NA N G + T ER K + NGVD I
Sbjct: 59 STDSKSPTLFAFITFENKCSADNAIASLNGSSFQGNTLKVEYTHIVERYKNKLENGVDQI 118
Query: 266 VLDSSQGNSTYQIKMIKYIKETYPEIQVV 294
+++ K+ KY KET P + V
Sbjct: 119 HHSNNEKAKIRFSKIEKYTKETRPTVSEV 147
>SPBC31F10.17c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 135
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 179 MITAQLGVTLQDANYILEKSKKG 201
M T LG +QD +++ +K+KKG
Sbjct: 1 MTTTPLGKMIQDGDFVFQKAKKG 23
>SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 942
Score = 27.5 bits (58), Expect = 4.7
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 304 AKNLIDAGVDALRVGMGSGSI 324
AKNLI AG+D++ V G GS+
Sbjct: 281 AKNLISAGIDSIIVCGGDGSL 301
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 27.5 bits (58), Expect = 4.7
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 93 EYQANEVHKVKKYKHGFIRDPVCMGPENTVADVLEAKKKNGFTGYPITQNGK-LGGRLIG 151
E + H V +Y+ ++ V +N +A +A +K+G I K GRL G
Sbjct: 286 EQEGAPAHIVSEYEQ-LLQFHVATYMDNEIAGQPQALQKSGRPLKSIRARLKGKEGRLRG 344
Query: 152 IVTSRDIDFRE-----GDPHLSLKEVMTP 175
+ + +DF GDP+LSL E+ P
Sbjct: 345 NLMGKRVDFSARTVITGDPNLSLDELGVP 373
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 24 GLTYNDFLLLPGY----IDFTAEEVDLTSPLTKKILLK 57
G TYND P + D+T++E+DL +P T + K
Sbjct: 1941 GRTYNDLTQYPVFPWVIADYTSKELDLNNPKTYRNFCK 1978
>SPAC23G3.09 |taf4||transcription factor TFIID complex subunit
Taf4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 365
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 173 MTPINDMITAQLGVTLQDANYILEKSKKGKLPIINNDGELVAL 215
MTP+ + G+ +D+N + S+ G LP+ + ++ +
Sbjct: 289 MTPMTPAVGGGFGIRKKDSNSLKPSSRDGVLPLQQEEKGIITI 331
>SPCC330.05c |ura4||orotidine 5'-phosphate decarboxylase Ura4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 26.6 bits (56), Expect = 8.2
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 338 ATAVYQVASYARHFNVPVI-ADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGEY 394
A+ VY++AS+A N + +G IQ + + L LG +++ + + S A G Y
Sbjct: 108 ASGVYKIASWAHITNCHTVPGEGIIQGLKEV--GLPLGRGLLLLAEMSSKGSLATGSY 163
>SPAC977.14c |||aldo/keto reductase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 351
Score = 26.6 bits (56), Expect = 8.2
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 164 DPHLSLKEVMTPINDMI 180
DPH+S +EVM +ND++
Sbjct: 159 DPHVSAEEVMRALNDVV 175
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.135 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,215,482
Number of Sequences: 5004
Number of extensions: 91951
Number of successful extensions: 232
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 219
Number of HSP's gapped (non-prelim): 14
length of query: 512
length of database: 2,362,478
effective HSP length: 76
effective length of query: 436
effective length of database: 1,982,174
effective search space: 864227864
effective search space used: 864227864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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