Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001035-TA|BGIBMGA001035-PA|IPR000644|CBS, IPR001093|IMP
dehydrogenase/GMP reductase, IPR005990|IMP dehydrogenase
(512 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0175 + 32152428-32153423,32153692-32153889,32154942-321551... 237 2e-62
02_05_1232 + 35110891-35111154,35111272-35111448,35111557-351116... 40 0.006
11_04_0385 - 17022367-17022597,17022738-17022797,17022912-170229... 36 0.077
07_03_1271 + 25356087-25356232,25356419-25356543,25356650-253566... 36 0.077
07_01_0379 + 2830475-2830614,2831180-2831304,2831510-2831556,283... 35 0.13
03_06_0215 + 32416097-32416236,32416727-32416851,32417092-324171... 33 0.41
04_03_0052 + 10257109-10257337,10257580-10257668,10257708-102582... 33 0.72
08_02_1054 + 23980962-23981096,23981208-23981420,23983062-239831... 31 2.2
02_02_0188 + 7617838-7620231,7621856-7622071,7622167-7622328,762... 31 2.2
04_04_1206 + 31727931-31728048,31728492-31728538,31728782-317289... 31 2.9
04_01_0289 + 3830052-3831134,3831141-3831230,3831494-3831525,383... 31 2.9
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 31 2.9
03_06_0390 + 33574495-33575976 30 3.8
03_05_1057 - 30005946-30006088,30006183-30006243,30006493-300065... 30 5.1
03_05_0195 - 21822418-21822441,21822480-21822659,21823337-218234... 29 6.7
03_01_0240 - 1862699-1864186,1864245-1864442 29 6.7
04_04_1438 - 33609242-33609349,33609571-33609663,33609840-336098... 29 8.8
04_01_0202 - 2414640-2414746,2414866-2414937,2415041-2415110,241... 29 8.8
03_05_0936 - 28955486-28955683,28956320-28956424,28956550-289566... 29 8.8
01_07_0007 + 40378472-40378636,40378726-40378858,40378941-403791... 29 8.8
>03_06_0175 +
32152428-32153423,32153692-32153889,32154942-32155121,
32156224-32156481,32157310-32157381
Length = 567
Score = 237 bits (580), Expect = 2e-62
Identities = 132/327 (40%), Positives = 189/327 (57%), Gaps = 11/327 (3%)
Query: 11 DGLSAEDTFANSEGLTYNDFLLLPGYIDFTAEEVDLTSPLTKKILLKAPLVSTPMDTVTE 70
DG A F+ TY+D + LPGYI F A+ VDL++ L+++I L P V++PMDTV+E
Sbjct: 11 DGFPAPRLFSQGVSYTYDDVIFLPGYIGFPADAVDLSTRLSRRIPLSIPCVASPMDTVSE 70
Query: 71 ADMAISMALCGGIGIIHHNCTPEYQANEVHKVKKYKHGFIRDPVCMGPENTVADVLEAKK 130
A MA +MA G ++H N P QA+ V K + F+ P +T + A
Sbjct: 71 AAMAAAMASLGAAAVVHCNTEPHLQASIVRAAKSRRLPFVSSVPLFSPASTPSLSDFAGH 130
Query: 131 KNGFTGYPITQNGKLGGRLIGIVTSRDIDFREGDPHLSLKEVMTPINDMITAQLGVTLQD 190
G +T+ G +L+G+ + + R+ L + E M P ++A +
Sbjct: 131 DYGL----VTERGDSLSKLVGVAVAAETSSRQAP--LPVSEYMRPAPRSVSASFD--FEQ 182
Query: 191 ANYILEKSKKGKLPIINNDGELVALIARTDLKKARSYPNASKDS---NKQLLVGAAIGTR 247
A L P++++D E++ LI D+++ RSYP K S + + +V A+IGTR
Sbjct: 183 AAAFLADEGLDYAPLVSDDSEVIDLITVNDVERIRSYPKLGKPSLGADGKFVVAASIGTR 242
Query: 248 DTDRERLKLLVNNGVDVIVLDSSQGNSTYQIKMIKYIKETYPEIQVVGGNVVTRMQAKNL 307
+ D+ RL+ LV G + IV+DSSQGNS YQI MIKY K+ YPE+ ++GGNVVT QA+NL
Sbjct: 243 EDDKRRLEQLVKAGANAIVVDSSQGNSIYQIDMIKYAKKMYPEVDLIGGNVVTIAQAQNL 302
Query: 308 IDAGVDALRVGMGSGSICITQEVMACG 334
+ +GVD LRVGMGSGSIC TQEV A G
Sbjct: 303 VASGVDGLRVGMGSGSICTTQEVCAVG 329
Score = 196 bits (477), Expect = 5e-50
Identities = 102/176 (57%), Positives = 129/176 (73%), Gaps = 6/176 (3%)
Query: 337 QATAVYQVASYARHFNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGEYFF 396
+ATAVY+VASYA+ NVPVIADGGI + GHI+K+L+LGASTVMMGS LAG+ EAPG Y +
Sbjct: 398 KATAVYKVASYAKDHNVPVIADGGISNSGHIVKALSLGASTVMMGSFLAGSHEAPGTYEY 457
Query: 397 SDGVRLKKYRGMGSLEAMESKDGKGSAMSRYFHKESDKHRVAQGVSGSIVDKGSVLRFLP 456
DG R+KKYRGMGSLEAM KGS +RY ++ K +VAQGV G++ DKGSVLRF+P
Sbjct: 458 KDGHRVKKYRGMGSLEAMT----KGSD-ARYL-GDTLKLKVAQGVVGAVADKGSVLRFIP 511
Query: 457 YLQAGMQHSCQDLGARSVSVLREMSHSGDLRFMKRTYSAQLEGNVHGLFSYEKRLF 512
Y ++ QDLGA S+ E+ S ++ RT +AQ+EG +HGL SYEK+ F
Sbjct: 512 YTMQAVKQGFQDLGASSLQSAHELLRSETIKLEVRTGAAQVEGGIHGLVSYEKKAF 567
>02_05_1232 +
35110891-35111154,35111272-35111448,35111557-35111626,
35111717-35111788,35111921-35111976
Length = 212
Score = 39.5 bits (88), Expect = 0.006
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 148 RLIGIVTSRDIDFREGDPHLSLKEVMTPINDMITAQLGVTLQDANYILEKSKKGKLPIIN 207
R +G++ D + EVMT + IT T+ DA ++ K K +LPI+N
Sbjct: 131 RCVGVIVKSDRARASHGSKTKIAEVMT--SPAITLPSDKTVMDAAALMLKKKIHRLPIVN 188
Query: 208 NDGELVALIARTDL 221
D +++ ++ R D+
Sbjct: 189 QDRQVIGIVTRADV 202
>11_04_0385 -
17022367-17022597,17022738-17022797,17022912-17022997,
17023056-17023218,17023540-17023598,17023693-17023798,
17023927-17023993,17024109-17024222,17024664-17025077,
17025799-17025887
Length = 462
Score = 35.9 bits (79), Expect = 0.077
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 145 LGGRLIGIVTSRDIDFREGDPHLSLKEVMTPINDMIT-----AQLGVTLQDANYILEKSK 199
+G + GI+TSRDI R +L TP+ ++T A + + + DA I+++ K
Sbjct: 197 VGNKAQGILTSRDILMRMIAKNLPADS--TPVEKVMTLDPECATVDMPILDALRIMQERK 254
Query: 200 KGKLPIINNDGELVALIARTDLKKA 224
LP+++ DG +V+++ D+ A
Sbjct: 255 FLHLPVMDRDGSIVSILDVIDITHA 279
>07_03_1271 +
25356087-25356232,25356419-25356543,25356650-25356696,
25356792-25356869,25356949-25357073,25357312-25357372,
25357723-25357785,25358262-25358331,25358740-25358945,
25359074-25359253
Length = 366
Score = 35.9 bits (79), Expect = 0.077
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 353 VPVIADGGIQSVGHIIKSLALGASTVMMG 381
VPV+ DGGI+ + K+LALGA VM+G
Sbjct: 281 VPVLVDGGIRRGTDVFKALALGARAVMVG 309
>07_01_0379 +
2830475-2830614,2831180-2831304,2831510-2831556,
2831838-2831962,2832116-2832182,2832266-2832328,
2832488-2832557,2832642-2832742,2832837-2832941,
2833023-2833211
Length = 343
Score = 35.1 bits (77), Expect = 0.13
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 339 TAVYQVASYARHFNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGE 393
+A+ +V AR +PV DGG++ + K+LALGA+ V +G + + A GE
Sbjct: 242 SALEEVVKAARG-QLPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAAGE 295
>03_06_0215 +
32416097-32416236,32416727-32416851,32417092-32417138,
32417445-32417569,32417673-32417739,32417808-32417900,
32418024-32418093,32418193-32418398,32418489-32418677
Length = 353
Score = 33.5 bits (73), Expect = 0.41
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 353 VPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGE 393
+PV DGG++ + K+LALGA+ V +G + A GE
Sbjct: 265 IPVYLDGGVRRGTDVFKALALGAAGVFIGRPVVFALAAEGE 305
>04_03_0052 +
10257109-10257337,10257580-10257668,10257708-10258289,
10258477-10258668,10259392-10259563,10260190-10260461,
10260682-10260801,10260912-10260968,10261631-10261831,
10262451-10262511,10262712-10263013
Length = 758
Score = 32.7 bits (71), Expect = 0.72
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 64 PMDTVTEADMAISMALCGGIGIIHHNCTPEYQANEVHKVKKYKHGFIRDPVCMGPEN 120
P TV D ++ +CGG+G ++C PE + ++ +GF +GP N
Sbjct: 28 PQGTVKALDSHVTCEVCGGMGHSGNDC-PETREEAMYMGNNNNNGFRPQGAALGPAN 83
>08_02_1054 +
23980962-23981096,23981208-23981420,23983062-23983157,
23983420-23983565,23983679-23983898,23984502-23984561
Length = 289
Score = 31.1 bits (67), Expect = 2.2
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 11/119 (9%)
Query: 277 QIKMIKYIKETYPEIQVVGGNVVTRM----QAKNLIDAGVDALRV-GMGSGSICITQEVM 331
Q+ ++ +E E + G V+ ++ +A +AGVD + V G +G I QE +
Sbjct: 92 QVYWGEFPRERVDEAHLAGVKVLHQVGSFEEAAKAKEAGVDGIIVQGCEAGGHVIGQEGL 151
Query: 332 ACGCPQATAVYQVASYARHFNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEA 390
P+ V ++ VIA GGI +LALGA V +G+ T E+
Sbjct: 152 LPLLPR------VVDLVSDTDISVIAAGGIVDGRGYAAALALGAQGVCLGTRFLTTEES 204
>02_02_0188 + 7617838-7620231,7621856-7622071,7622167-7622328,
7622466-7622516,7622936-7623070,7623161-7623184,
7623341-7623452,7623776-7623901,7624004-7624053,
7624339-7624497,7624582-7624677,7624751-7624866,
7624907-7624984,7624985-7625108,7625193-7625306,
7625423-7625503,7625616-7625756,7625834-7625848
Length = 1397
Score = 31.1 bits (67), Expect = 2.2
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 205 IINNDGELVALIARTDLKKARSYPNASKDSNKQLLVGAAIGTRDTDRERLKLL--VNNGV 262
I+ N G V ++AR + +KARS D L++G D + K + V N V
Sbjct: 913 ILRNKGIPVRVLARNE-EKARSMLGPDVD----LIIGDVTKENSLDPKYFKGIKKVVNAV 967
Query: 263 DVIVLDSSQGNSTYQIKMIKYIKETYPEIQVVGGNVVTRMQAKNLIDAGVDALRVGMGSG 322
VIV +G++ + K + IK PEI+ +V + +NLI+A ++ VG+ G
Sbjct: 968 SVIV-GPKEGDTPDRQKYKQGIKFFEPEIKGPSPEMVEYLGMQNLINAVKNS--VGLTEG 1024
Query: 323 SI 324
+
Sbjct: 1025 KL 1026
>04_04_1206 +
31727931-31728048,31728492-31728538,31728782-31728906,
31729067-31729133,31729221-31729283,31729429-31729498,
31729751-31729770,31729840-31729956,31730046-31730227,
31730586-31730640,31731604-31731697,31731791-31731900,
31733167-31733193,31733510-31733701
Length = 428
Score = 30.7 bits (66), Expect = 2.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 353 VPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGEYFFSDGVRL 402
VPV D G + + K+LALGAS V +G + + GE + +R+
Sbjct: 183 VPVFIDSGFRRGTDVFKALALGASGVFIGRPVLFSLAIDGEAGVRNALRM 232
>04_01_0289 +
3830052-3831134,3831141-3831230,3831494-3831525,
3833690-3834623
Length = 712
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 238 LLVGAAIGTRDTDRERLKLLVNNGVD--VIVLDSSQGNSTYQIKMIKYIKETYPEIQVVG 295
LL+ AA ++ R+++K +V + D + VL TYQ++ K IK+ E++V+G
Sbjct: 537 LLINAADTYQEVARKQIKTMVEDLEDARMAVLVVMNAADTYQLEAEKKIKDKMEELRVLG 596
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 30.7 bits (66), Expect = 2.9
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 171 EVMTPINDMITAQLGVTLQDANYILEKSKKGKLPIINN---DGELVALIARTDLKKARSY 227
E T +D++ A LQD + +E+ K+ KL NN E+ +L+ L+ S
Sbjct: 1587 EPSTSTDDVVEA---ADLQDETFYIEEPKEAKLADENNKMVTVEMESLVKNLSLELLESE 1643
Query: 228 PNASKDSNKQLLVGAAIGTRDTDRERLKLLVNNGVDVIVLDSSQGN 273
N + K++ VG +G +D + LLV I L+ + +
Sbjct: 1644 KNVMLEYEKEMKVG-HVG--QSDENDVGLLVEEDAKKIKLEEADSD 1686
>03_06_0390 + 33574495-33575976
Length = 493
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/39 (43%), Positives = 20/39 (51%)
Query: 131 KNGFTGYPITQNGKLGGRLIGIVTSRDIDFREGDPHLSL 169
+ G G P+T G GGR I I S DF D HLS+
Sbjct: 171 RGGADGPPVTVPGMPGGREITIPVSELPDFLVQDDHLSM 209
>03_05_1057 -
30005946-30006088,30006183-30006243,30006493-30006566,
30006939-30007020,30007097-30007355,30007633-30007682,
30008243-30008275
Length = 233
Score = 29.9 bits (64), Expect = 5.1
Identities = 24/111 (21%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 119 ENTVADVLEAKKKNGFTGYPITQNGKLGGRLIGIVTSRDIDFR---EGDPHLSLK--EVM 173
+++V D +++ ++ + + G+ + GIVT RD + +G S K ++M
Sbjct: 105 DDSVYDAVKSMTQHNVGALVVVKPGQ-DKSIAGIVTERDYLRKIIVQGRSSKSTKVGDIM 163
Query: 174 TPINDMITAQLGVTLQDANYILEKSKKGKLPIINNDGELVALIARTDLKKA 224
T N +IT + + A ++ + + +P+I+ G +V +++ D+ +A
Sbjct: 164 TEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTG-MVGMVSIGDIVRA 213
>03_05_0195 -
21822418-21822441,21822480-21822659,21823337-21823453,
21824347-21824412,21825592-21825683,21825924-21825987,
21826098-21826176,21826248-21826387,21827253-21827334,
21827565-21827572,21828005-21828103,21828208-21828285,
21828379-21828472,21828726-21828823,21830299-21830502
Length = 474
Score = 29.5 bits (63), Expect = 6.7
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 130 KKNGFTGYPITQNGKL---GGRLIGIVTSRDIDFREGDPHLS---LKEVMTPINDMITAQ 183
KKN Y KL G L G + + D E + ++EVMTP+ D++
Sbjct: 190 KKNSSEPYVTEDELKLMLRGAELSGAIAEDEQDMIENVLEIKDTHVREVMTPLVDVVAID 249
Query: 184 LGVTLQDANYILEKSKKGKLPI 205
TL D + E + ++P+
Sbjct: 250 ATATLIDFKNLWETHQYSRVPV 271
>03_01_0240 - 1862699-1864186,1864245-1864442
Length = 561
Score = 29.5 bits (63), Expect = 6.7
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 293 VVGGNVVTRMQAKNLIDAGVDAL-RVGMGSGSICITQEVMACGCPQATAVYQVASYARHF 351
V GG + + + AG AL R+G+G + T+ + G A A Y HF
Sbjct: 34 VSGGREYSWRETRERCLAGASALARLGVGRRDVLSTRHGLIAGQVAVIAANIPAMYELHF 93
Query: 352 NVPVIADGGI 361
+VP+ GG+
Sbjct: 94 SVPMA--GGV 101
>04_04_1438 -
33609242-33609349,33609571-33609663,33609840-33609884,
33610000-33610055,33610362-33610468,33610605-33610806,
33611068-33611122,33611129-33611167,33611664-33611725,
33611875-33611988,33612618-33612627,33612750-33612835,
33613008-33613377
Length = 448
Score = 29.1 bits (62), Expect = 8.8
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 371 LALGASTVMMGSLLAGTSEAPGEYFFSDGVRLKKYRGMGSLEAMESKDGKGSAMSRYFHK 430
L G+ +V+ S + +S P +G ++ R + + E+KD +G K
Sbjct: 37 LCPGSPSVLRASSSSPSSPQPTAGG-DEGEEEEEGRRLSKQSSWEAKDSEGDDYLYRLGK 95
Query: 431 ESDKHRVAQGVSGSIVDKGSVLRFL 455
E+D +A G IVD V FL
Sbjct: 96 EADNMNIAVGARSGIVDDLFVGNFL 120
>04_01_0202 -
2414640-2414746,2414866-2414937,2415041-2415110,
2415992-2416174,2416254-2416538
Length = 238
Score = 29.1 bits (62), Expect = 8.8
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 147 GRLIGIVTSRDIDFREGDPHLSLKEVMTPINDMITAQLGVTLQDANYILEKSKKGKLPII 206
GR IG+++ +D ++ EVM+ + IT T+ +A ++ K K ++P++
Sbjct: 139 GRCIGVISKKDKAKASNGLDSTVGEVMS--SPAITLTPEKTVLEAAALMLKEKVHRIPVV 196
Query: 207 NNDGELVALIA 217
N +++ I+
Sbjct: 197 NEQQQVIDYIS 207
>03_05_0936 -
28955486-28955683,28956320-28956424,28956550-28956693,
28957078-28957356,28957480-28957587,28958288-28958567,
28958724-28960029,28961301-28962342
Length = 1153
Score = 29.1 bits (62), Expect = 8.8
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Query: 350 HFNVPVIAD---GGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGEYFFSDGVRLKKYR 406
H + P + D G ++S+G I S A + + SL+ G+SE EYF + + R
Sbjct: 537 HPDDPFVEDDQHGSVRSIGVGISSDAADIGSEVRESLIGGSSEGDIEYFNESNLSVSGKR 596
Query: 407 GMGSLEAMESKDGKGSAMSRYFHKESDKHRVAQGVS 442
+ + KG+ + ++ K + G S
Sbjct: 597 NSQQETEKKRINAKGAKQEQLNFIDNQKGVLPPGAS 632
>01_07_0007 +
40378472-40378636,40378726-40378858,40378941-40379111,
40379295-40379373,40379477-40379590,40379664-40379730,
40379819-40379924,40380009-40380067,40380258-40380367,
40380455-40380588,40380717-40380802,40380930-40381019,
40381104-40381283
Length = 497
Score = 29.1 bits (62), Expect = 8.8
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 151 GIVTSRDIDFREGDPHL-----SLKEVMTPINDMITAQLGVTLQDANYILEKSKKGKLPI 205
GI+TSRDI R +L ++++VMT + T + DA + + K LP+
Sbjct: 218 GILTSRDILMRVIAQNLPPESTTVEKVMTQTPECATVDTPIL--DALHTMHDGKFLHLPV 275
Query: 206 INNDGELVALI 216
++ DG +V ++
Sbjct: 276 LDKDGNVVTVV 286
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.135 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,382,092
Number of Sequences: 37544
Number of extensions: 614218
Number of successful extensions: 1483
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1467
Number of HSP's gapped (non-prelim): 26
length of query: 512
length of database: 14,793,348
effective HSP length: 85
effective length of query: 427
effective length of database: 11,602,108
effective search space: 4954100116
effective search space used: 4954100116
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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