Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001034-TA|BGIBMGA001034-PA|undefined
(336 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1682 - 39130696-39131705,39132355-39132583 33 0.25
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 31 0.99
07_01_0231 - 1698244-1700154 31 1.7
02_05_0218 + 26860319-26862448 31 1.7
11_06_0610 - 25449085-25453284 30 2.3
02_04_0122 - 19959137-19960043,19960150-19960714,19960932-19961202 30 2.3
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 30 3.0
09_02_0223 + 5977138-5977459,5979842-5980842 30 3.0
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 29 4.0
11_01_0620 - 4964263-4965052,4965578-4965663,4966332-4966413,496... 29 5.3
07_03_1160 - 24430240-24431268 29 5.3
03_02_0985 - 12961787-12961984,12963177-12963337,12965332-129654... 29 5.3
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 7.0
05_03_0088 - 8308587-8308649,8308682-8308738,8310403-8310501,831... 29 7.0
02_05_0591 - 30183105-30183869 29 7.0
02_04_0381 - 22497519-22497769,22498157-22498247 29 7.0
11_04_0292 - 15870910-15871095,15871173-15871265,15871881-158719... 28 9.3
11_01_0727 - 6010537-6010548,6011029-6011606,6011709-6011774,601... 28 9.3
07_03_1485 - 26896220-26896314,26896380-26896791 28 9.3
02_01_0302 - 2021221-2023305 28 9.3
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 33.5 bits (73), Expect = 0.25
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 59 QQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPP 96
Q PP +++ P+ N PP YG PP N Y PP
Sbjct: 242 QYTPPNSYQAPPTSYNHPPPPYGYNSPIPPT-NKYLPP 278
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Query: 54 QFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNGY 102
Q+G + Q PPP P P+ PP ++ P G PP Q Y
Sbjct: 12 QYGFHPQAPPPP----PQYPHHPPPYAAPLPQYAPYARGMPPPQAQQLY 56
>07_01_0231 - 1698244-1700154
Length = 636
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 42 GLSQAFNFNVHGQFGVNQQRPPPNHEQIPSEPNQEPPNY 80
GLS A ++ + FG+N P + ++P P EPPNY
Sbjct: 250 GLSTAHHYVLGWSFGMNSPAPTIDSTKLPKLP--EPPNY 286
>02_05_0218 + 26860319-26862448
Length = 709
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 41 GGLSQAFNFNVHGQFGVNQQRPPPN---HEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPN 97
GG + F + + ++PPP+ HE I ++P P G Q +F NH +PPN
Sbjct: 205 GGGKASLGFGLFSPEATSLEQPPPSMLFHEGIDTKP----PLLGAQPQFLLNHYQPQPPN 260
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 59 QQRPPPNHEQIPSEP---NQEPPNYGEQDRFPPNHNGYRPPN 97
+++ PP+H S P EPP PP+H Y PP+
Sbjct: 944 EEKSPPSHTPESSSPPSEESEPPPSPTPKSSPPSHEEYVPPS 985
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 61 RPPPNHEQIPSEP---NQEPPNYGEQDRFPPNHNGYRPPN 97
+ PP+H S P EPP PP+H Y PP+
Sbjct: 896 KSPPSHTPESSSPPSKESEPPPTPTPKSSPPSHEEYVPPS 935
>02_04_0122 - 19959137-19960043,19960150-19960714,19960932-19961202
Length = 580
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 62 PPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPP 96
PPPN +P+ PN P N Q PP + PP
Sbjct: 101 PPPNQNNLPNIPNYNPYNVNHQ-YIPPFYYPPYPP 134
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Query: 53 GQFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRP-PNGQNGYE 103
GQ V + PP H + P PPN G PPN+ + P P G Y+
Sbjct: 252 GQGPVPPRDAPPMHHAQGNVPPPPPPNAG-----PPNYQPHAPNPQGYTNYQ 298
>09_02_0223 + 5977138-5977459,5979842-5980842
Length = 440
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 62 PPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPP-NGQNG 101
PPP +PS P+ PP+ E D PP+ +G P +G G
Sbjct: 382 PPPTMLMLPSPPSP-PPSDAEGDAPPPSGDGDEAPGSGAKG 421
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 65 NHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPP 96
+H + PS P EPP PP H+ +PP
Sbjct: 188 HHAKPPSLPPAEPPVPSPSPEHPPRHSPSKPP 219
>11_01_0620 -
4964263-4965052,4965578-4965663,4966332-4966413,
4967052-4967156,4967600-4967772,4967988-4968101,
4973939-4974037,4974320-4974398,4975424-4975492,
4975955-4976061
Length = 567
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 35 VQGAVLGGLSQAFNFNVHGQFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYR 94
+ + G S + N N +G G + + P Q P P YG++ ++ +G
Sbjct: 438 INPTAIPGFSSSSNANKYGDSGEDLPKAPWE-AQAPGSLPPPPARYGQRQQYFEQQHGL- 495
Query: 95 PPNGQNG 101
P+G NG
Sbjct: 496 -PSGNNG 501
>07_03_1160 - 24430240-24431268
Length = 342
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 61 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPP 96
+P PN IP++P Q PN + PP N PP
Sbjct: 217 QPNPNGPSIPNQPPQPIPNGPIKPDQPPQPNPDMPP 252
>03_02_0985 -
12961787-12961984,12963177-12963337,12965332-12965489,
12966015-12966105,12966715-12966752,12966994-12967154,
12967249-12968687,12968815-12969227,12969630-12970987,
12971089-12971454,12971533-12971696,12971748-12971820,
12972967-12973113
Length = 1588
Score = 29.1 bits (62), Expect = 5.3
Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Query: 256 TENPKQPDKTPNYEQNGNQNSNIEKTTKNPDQPLFIPLNPNEYTYGGDKIEVTAPKRDTN 315
TE K+ K+ N K TK D+ F NEY G+K+
Sbjct: 844 TEKSKKHSKSKNRRGIDRDEHKTSKKTKKEDRHYFNKDWKNEYDLAGNKVRDETKALSAK 903
Query: 316 DK-PKPADEDDEYAI 329
K K + E DE+++
Sbjct: 904 AKMSKDSCEQDEFSL 918
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 55 FGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPP 96
+GVN +PPP PS P PP PP P
Sbjct: 99 YGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAP 140
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 56 GVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPP 88
G QQ+ PP Q+ +P PP YG PP
Sbjct: 75 GPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPP 107
>05_03_0088 -
8308587-8308649,8308682-8308738,8310403-8310501,
8311501-8311620,8311715-8311837,8312416-8312471,
8315404-8315451,8315555-8315615
Length = 208
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 53 GQFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNH---NGYRPPNGQNGYE 103
GQ G ++R PPNH P E + G + F P H N + G+N Y+
Sbjct: 6 GQLG-GRERRPPNHIYAAGAPTPELVSGGVRAVFLPQHVQVNHFIQSEGKNVYD 58
>02_05_0591 - 30183105-30183869
Length = 254
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 69 IPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNGYE 103
+P P+ P ++ PP+H Y PP G E
Sbjct: 175 VPPPPHPPPHHHAFHQLMPPHHGQYAPPYDMYGGE 209
>02_04_0381 - 22497519-22497769,22498157-22498247
Length = 113
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 65 NHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNGYE 103
+H+ +P+ PP++ + PP+H PP G E
Sbjct: 33 DHDGGDHDPSPSPPDHEDPSPSPPDHEDEPPPPSSPGKE 71
>11_04_0292 -
15870910-15871095,15871173-15871265,15871881-15871958,
15872065-15872352,15872854-15872967
Length = 252
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 22 TGILSGAHDVHKQVQGAVLGGLSQAFNFNVHGQFGVNQQRPP 63
T I H HKQ +G VL G V+G++ VN + P
Sbjct: 152 TRICQTQHTCHKQPRGTVLYGYYACEFLRVNGRYRVNAKNLP 193
>11_01_0727 -
6010537-6010548,6011029-6011606,6011709-6011774,
6011867-6011964,6013238-6013608
Length = 374
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 56 GVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPP--NHNGYRPPNG 98
GV RPPP H PS ++ G PP N+ PP G
Sbjct: 185 GVITPRPPPVHYSKPSRTDRNRNYRGNYQNGPPQGNYQNSPPPYG 229
>07_03_1485 - 26896220-26896314,26896380-26896791
Length = 168
Score = 28.3 bits (60), Expect = 9.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 311 KRDTNDKPKPADEDDEYAIDIRF 333
+RD ND K +D++Y++DI F
Sbjct: 85 QRDANDDDKEVTDDEDYSMDILF 107
>02_01_0302 - 2021221-2023305
Length = 694
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 7/40 (17%)
Query: 62 PPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 101
PP ++ IPS P P+ G P +GY+PP+GQ G
Sbjct: 568 PPGSYGPIPSTP----PSSGSP---PSPSSGYQPPSGQPG 600
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.310 0.136 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,765,166
Number of Sequences: 37544
Number of extensions: 405690
Number of successful extensions: 996
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 942
Number of HSP's gapped (non-prelim): 69
length of query: 336
length of database: 14,793,348
effective HSP length: 82
effective length of query: 254
effective length of database: 11,714,740
effective search space: 2975543960
effective search space used: 2975543960
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 60 (28.3 bits)
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