Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001034-TA|BGIBMGA001034-PA|undefined
(336 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033536-5|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 33 0.22
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 33 0.38
AL110487-17|CAH10818.1| 304|Caenorhabditis elegans Hypothetical... 33 0.38
AL110487-16|CAH10817.1| 307|Caenorhabditis elegans Hypothetical... 33 0.38
AL110487-15|CAB54432.1| 395|Caenorhabditis elegans Hypothetical... 33 0.38
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 33 0.38
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 32 0.50
U29614-6|AAA68809.2| 378|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical ... 30 2.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.7
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z82273-1|CAB54978.2| 565|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z82263-7|CAJ76937.1| 565|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical pr... 29 4.7
U29244-15|AAC71096.2| 471|Caenorhabditis elegans Hypothetical p... 29 4.7
J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein. 29 4.7
AF025464-2|AAN84804.1| 496|Caenorhabditis elegans Prion-like-(q... 29 4.7
AF025464-1|AAN84805.1| 529|Caenorhabditis elegans Prion-like-(q... 29 4.7
AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical ... 29 4.7
Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical pr... 29 6.2
U88177-2|AAB42291.1| 358|Caenorhabditis elegans Hypothetical pr... 29 6.2
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 29 6.2
AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocar... 29 6.2
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 29 6.2
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 28 8.2
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 28 8.2
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin ... 28 8.2
AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans Prion-like-(q... 28 8.2
>AL033536-5|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 61 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 101
+P PN PS+PN+ PN G + PN G PNG NG
Sbjct: 1237 KPGPNGPNGPSDPNKPGPN-GPNEPSDPNRPG---PNGPNG 1273
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 61 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 101
+P PN PS+PN+ PN G + PN G PNG NG
Sbjct: 1055 KPGPNGPNGPSDPNKPGPN-GPNEPSDPNKPG---PNGPNG 1091
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 61 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 101
+P PN PS+PN+ PN G PN G PNG NG
Sbjct: 1251 KPGPNGPNEPSDPNRPGPN-GPNGPLDPNKPG---PNGPNG 1287
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 61 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQN 100
+P PN PS+PN+ PN G + PN G PNG +
Sbjct: 1335 KPGPNGPNGPSDPNKPGPN-GPNEPSDPNKPGPNGPNGSS 1373
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 61 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 101
+P PN PS+PN+ PN G PN G PNG NG
Sbjct: 1209 KPGPNGPNEPSDPNKPGPN-GSNGPSDPNKPG---PNGPNG 1245
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 61 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 101
+P PN PS+PN+ PN G PN G PNG NG
Sbjct: 1125 KPGPNGPNEPSDPNKPGPN-GPNGPSDPNKPG---PNGPNG 1161
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 61 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 101
+P PN PS+PN+ PN G PN G PNG NG
Sbjct: 1307 KPGPNGPNEPSDPNKPGPN-GPNGPSDPNKPG---PNGPNG 1343
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 61 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQN 100
+P PN PS+PN+ PN G + PN G PNG N
Sbjct: 1153 KPGPNGPNGPSDPNKPGPN-GPNESSDPNKPG---PNGPN 1188
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 61 RPPPNHEQIPSEPNQEPPN--YGEQDRFPPNHNGYRPPNGQN 100
+P PN PS+PN+ PN G D P NG P+ N
Sbjct: 1069 KPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPN 1110
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 61 RPPPNHEQIPSEPNQEPPN--YGEQDRFPPNHNGYRPPNGQN 100
+P PN PS+PN+ PN G D P NG P+ N
Sbjct: 1097 KPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPN 1138
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 61 RPPPNHEQIPSEPNQEPPN--YGEQDRFPPNHNGYRPPNGQN 100
+P PN PS+PN+ PN G D P NG P+ N
Sbjct: 1181 KPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPN 1222
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 57 VNQQRPPPNHEQIPSEPNQEPPN--YGEQDRFPPNHNGYRPPNGQN 100
++ +P PN PS+PN+ PN G D P NG P+ N
Sbjct: 1275 LDPNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPN 1320
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 62 PPPNHEQIPSEPNQEPPN--YGEQDRFPPNHNGYRPPNGQN 100
P PN PS+PN+ PN G D P NG P+ N
Sbjct: 1042 PSPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPN 1082
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 61 RPPPNHEQIPSEPNQEPPN--YGEQDRFPPNHNGYRPPN 97
+P PN PS+PN+ PN G D P NG P+
Sbjct: 1349 KPGPNGPNEPSDPNKPGPNGPNGSSDPNKPGPNGPSNPS 1387
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 61 RPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNG 98
+P P+ PS+PN+ PN G D P+ +G PNG
Sbjct: 976 KPGPSGPNGPSDPNKPSPN-GPSDPVKPSPSG-PSPNG 1011
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 54 QFGVNQQRPPPNHEQIPSEPNQEPPN 79
Q V QQ PPP +Q ++P Q+PPN
Sbjct: 254 QAPVVQQAPPPKQQQAQAQPVQQPPN 279
>AL110487-17|CAH10818.1| 304|Caenorhabditis elegans Hypothetical
protein Y39E4B.3c protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 53 GQFGVNQQRPPPNHEQIPSEPNQEPPNYG----EQDRFPPNHNGYRPPNG 98
G G NQ RP N P PN G Q F PN+ G+RP G
Sbjct: 75 GSGGFNQPRPNNNFNNNPQGGFHPNPNQGGFHPNQGGFHPNNGGFRPGTG 124
>AL110487-16|CAH10817.1| 307|Caenorhabditis elegans Hypothetical
protein Y39E4B.3b protein.
Length = 307
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 53 GQFGVNQQRPPPNHEQIPSEPNQEPPNYG----EQDRFPPNHNGYRPPNG 98
G G NQ RP N P PN G Q F PN+ G+RP G
Sbjct: 75 GSGGFNQPRPNNNFNNNPQGGFHPNPNQGGFHPNQGGFHPNNGGFRPGTG 124
>AL110487-15|CAB54432.1| 395|Caenorhabditis elegans Hypothetical
protein Y39E4B.3a protein.
Length = 395
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 53 GQFGVNQQRPPPNHEQIPSEPNQEPPNYG----EQDRFPPNHNGYRPPNG 98
G G NQ RP N P PN G Q F PN+ G+RP G
Sbjct: 75 GSGGFNQPRPNNNFNNNPQGGFHPNPNQGGFHPNQGGFHPNNGGFRPGTG 124
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 32 HKQVQGAVLGGLSQAFNFNVHGQFGVNQQR----PPPNHEQIPSEPNQEPPNYGEQDRFP 87
H+Q G QA +G +G Q PPP +Q P P PP + ++P
Sbjct: 177 HQQRAQQQQAGQQQAQGPPGYGPYGYAPQASTGYPPPPSQQSPYAPQAGPPPQ-MRHQYP 235
Query: 88 PNHNGYRPPNGQNGYE 103
P+ PP +GY+
Sbjct: 236 PHSQQQAPPGYWDGYQ 251
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 54 QFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNGYE 103
Q G Q+PPP+++Q S PN P G+Q PPN+ + Q G++
Sbjct: 2734 QQGQYSQQPPPSYQQ-SSYPNNYQP--GQQGNQPPNYQQPSHQSMQQGHQ 2780
>U29614-6|AAA68809.2| 378|Caenorhabditis elegans Hypothetical
protein F18E9.3 protein.
Length = 378
Score = 32.3 bits (70), Expect = 0.50
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 255 TTENPKQPDKTPNYEQNGNQNSNIEKTTKNPDQPLFIPLNPNEYTYGGDKIEVTAPKRDT 314
TTE K TP + I TT +P +PL P ++T G +I VT P T
Sbjct: 169 TTEKTKLLSTTPTSTTTRRKGGVIIDTTTSP-RPL---TTPRQWTIRGIRIRVTRPPAST 224
Query: 315 NDKPKP 320
P P
Sbjct: 225 TTTPTP 230
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 31.5 bits (68), Expect = 0.88
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 255 TTENPKQPD--KTPNYEQNGNQNSNIEKTTKNPDQPLFIPLNPNEYTYG 301
+T NP QP+ KT N + N + K K PL PL N++ G
Sbjct: 726 STTNPSQPETTKTKNNTKKSNSSKKHRKPKKKDVDPLSDPLLQNDFPIG 774
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 39 VLGGLSQAFNFNVHGQFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNG 98
V+ G+ + N G G N ++ P+ +Q EP+ G ++ P++ GY P
Sbjct: 7 VMSGIQDVLD-NKLGGLGGNNKQQQPSSQQSSQEPSNMNSGGGYPNQ-QPSYGGYGQPPQ 64
Query: 99 QNGY 102
Q GY
Sbjct: 65 QPGY 68
>AL117202-4|CAB55095.3| 222|Caenorhabditis elegans Hypothetical
protein Y47D3A.5 protein.
Length = 222
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 254 PTTENP-KQPDKTPNYEQNGNQNSNIEKTTKNPDQPLFIPLNPNEYTYGGDKIEVTAPKR 312
P+ +P P KTP + + + P + + + E + + PK+
Sbjct: 79 PSRNSPLTPPTKTPPHTPTRTPTTESPVAPRTPGKVVISSVEKQESSAPDESTIAATPKK 138
Query: 313 DTNDKPKPADEDDEYAI-DIRFKD 335
+ PK + DDE ++ D F+D
Sbjct: 139 SSKKSPKEQNYDDEVSVRDSLFED 162
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 26 SGAHDVHKQVQGAVLGGLSQAFNFNVHGQFGVN--QQRPPPNHEQIPSEPNQEPPNYGEQ 83
+G ++ V + GG Q F Q G +Q PP P P PP G
Sbjct: 194 NGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSG 253
Query: 84 DRFPPNHNGYRPP 96
PP G PP
Sbjct: 254 SPPPPPAAGSPPP 266
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 26 SGAHDVHKQVQGAVLGGLSQAFNFNVHGQFGVN--QQRPPPNHEQIPSEPNQEPPNYGEQ 83
+G ++ V + GG Q F Q G +Q PP P P PP G
Sbjct: 215 NGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSG 274
Query: 84 DRFPPNHNGYRPP 96
PP G PP
Sbjct: 275 SPPPPPAAGSPPP 287
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 26 SGAHDVHKQVQGAVLGGLSQAFNFNVHGQFGVN--QQRPPPNHEQIPSEPNQEPPNYGEQ 83
+G ++ V + GG Q F Q G +Q PP P P PP G
Sbjct: 200 NGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSG 259
Query: 84 DRFPPNHNGYRPP 96
PP G PP
Sbjct: 260 SPPPPPAAGSPPP 272
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 29.5 bits (63), Expect = 3.5
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 5/97 (5%)
Query: 7 IFVLLVVSECNGGLITGILSGAHDVHKQVQGAVLGG--LSQAFNFNVHGQFGVNQQRPPP 64
IFVL+ G + GA+ GG Q N+N + Q NQQ
Sbjct: 6 IFVLIASFSIAHGFVVRTRRGAYMSSSSYSRPSYGGDQWGQNNNYNPY-QNNWNQQNQ-- 62
Query: 65 NHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 101
N +Q + +Q +YG + P Y PP G
Sbjct: 63 NWDQYGNRGSQYGSSYGRPSSYGPPQPSYSPPKSSYG 99
>Z82273-1|CAB54978.2| 565|Caenorhabditis elegans Hypothetical
protein F56F12.1 protein.
Length = 565
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 254 PTTENPKQPDKTPNYEQNGNQNSNIEKTTKNPDQPLFIPLNPNEYTYGGDKIEVTAPKRD 313
P P YE NG + ++ K N + L P+NPN+Y G + K +
Sbjct: 80 PVDSTPSWAKNVKVYEPNGYVDPHLNK--HNMGRVLDGPVNPNKYFQGVPPASYSQVKHN 137
Query: 314 TNDKPKP 320
+ P P
Sbjct: 138 ESKPPVP 144
>Z82263-7|CAJ76937.1| 565|Caenorhabditis elegans Hypothetical
protein F56F12.1 protein.
Length = 565
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 254 PTTENPKQPDKTPNYEQNGNQNSNIEKTTKNPDQPLFIPLNPNEYTYGGDKIEVTAPKRD 313
P P YE NG + ++ K N + L P+NPN+Y G + K +
Sbjct: 80 PVDSTPSWAKNVKVYEPNGYVDPHLNK--HNMGRVLDGPVNPNKYFQGVPPASYSQVKHN 137
Query: 314 TNDKPKP 320
+ P P
Sbjct: 138 ESKPPVP 144
>Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical
protein F48F7.4 protein.
Length = 925
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 50 NVHGQFGVNQQRP--PPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 101
N H NQ+ P N + P++ NQ PP G + + YR G G
Sbjct: 632 NYHNNSSNNQRSPYQAQNQQNQPTQQNQHPPREGAPENY--RQQSYRGNRGGRG 683
>Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical
protein B0491.2 protein.
Length = 324
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Query: 51 VHGQFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 101
V Q+ P P+ + PS P +PP PP N + PNG NG
Sbjct: 67 VRRQYEETNATPTPHADGSPSAPPGQPP------AVPPVFNQPKTPNGANG 111
>U29244-15|AAC71096.2| 471|Caenorhabditis elegans Hypothetical
protein ZK1248.15 protein.
Length = 471
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 250 INFKPTTENPK--QPDKT-PNYEQNGNQNSNIEKTTK-NPDQP-LFIPLNPNEYTY 300
I +P++ N + +P KT P+ +QN N+ KTTK N ++P + + L+ +E T+
Sbjct: 409 ITLQPSSSNSESFKPRKTYPSSTYQSSQNGNVVKTTKPNSNRPKIPLSLSDDECTF 464
>J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein.
Length = 324
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Query: 51 VHGQFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQNG 101
V Q+ P P+ + PS P +PP PP N + PNG NG
Sbjct: 67 VRRQYEETNATPTPHADGSPSAPPGQPP------AVPPVFNQPKTPNGANG 111
>AF025464-2|AAN84804.1| 496|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform a protein.
Length = 496
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 257 ENPKQPDKTPNYEQNGNQNSNIEKTTKNPDQPLFIPLNPNE 297
+N + P + PNY+QN Q +++ +NP Q + NP +
Sbjct: 213 QNSQNPYQQPNYQQNQYQ-PQLQQFQQNPRQQQHVYSNPQQ 252
>AF025464-1|AAN84805.1| 529|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform b protein.
Length = 529
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 257 ENPKQPDKTPNYEQNGNQNSNIEKTTKNPDQPLFIPLNPNE 297
+N + P + PNY+QN Q +++ +NP Q + NP +
Sbjct: 235 QNSQNPYQQPNYQQNQYQ-PQLQQFQQNPRQQQHVYSNPQQ 274
>AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical
protein K08A2.1 protein.
Length = 411
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 36 QGAVLGGLSQAFNFNVHGQFGVNQQRPPPNHEQIPSEPNQEPPNYG 81
QG+V G S++ N +V+G ++ QR + S+ N++ P G
Sbjct: 321 QGSVSSGTSESSNGSVYGNQSLSPQRNGKKYHPSDSKGNRKEPGKG 366
>Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical
protein C41G7.5b protein.
Length = 560
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 58 NQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHN-GYRPP 96
N++R +HE +P+ P+ P + + F P+ N G PP
Sbjct: 418 NRRRKENSHEIVPTIPSIPIPTHFDMQMFDPSWNHGVHPP 457
>Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical
protein C41G7.5a protein.
Length = 602
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 58 NQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHN-GYRPP 96
N++R +HE +P+ P+ P + + F P+ N G PP
Sbjct: 460 NRRRKENSHEIVPTIPSIPIPTHFDMQMFDPSWNHGVHPP 499
>U88177-2|AAB42291.1| 358|Caenorhabditis elegans Hypothetical
protein F53E10.5 protein.
Length = 358
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 256 TENPKQPDKTPNYEQNGNQNSNIEKTTKNPD--QPLFIPLNPNEYT 299
T N + D+T NYE + N++ NP+ QP I P YT
Sbjct: 36 TNNERDADETLNYEMKDPHDHNVD-NNDNPEIRQPTEIDPRPPSYT 80
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 9/64 (14%)
Query: 45 QAFNFNVHGQFGVNQQRPPPNHEQIPSEPNQEPPNYGEQ------DRFPPNHNG---YRP 95
Q+ F + Q QQ PPP IP + P N Q + PP ++G Y P
Sbjct: 518 QSPQFPSYQQSPQQQQAPPPQRSPIPLSQSLPPLNSMTQQQRASMQQMPPPNSGPLQYSP 577
Query: 96 PNGQ 99
PN Q
Sbjct: 578 PNQQ 581
>AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocarbon
receptor orthologAHR-1 protein.
Length = 602
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 58 NQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHN-GYRPP 96
N++R +HE +P+ P+ P + + F P+ N G PP
Sbjct: 460 NRRRKENSHEIVPTIPSIPIPTHFDMQMFDPSWNHGVHPP 499
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 257 ENPKQPDKTPNYEQNGNQNSNIEKTTKNPDQPLFIPLNPNEYTYGGDKIEVTAPKRDTND 316
E+PK+ KTP ++ +++ E++ ++ D E T G T K D +D
Sbjct: 615 ESPKKKGKTPR--KSSKKSAAKEESEESSDDE---EEEQAEETNGSHTESPTKSKTDESD 669
Query: 317 KPKPADEDDE 326
+DEDDE
Sbjct: 670 NSTSSDEDDE 679
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 62 PPPNHEQIPSEP-NQEPPNYGEQDRFPPNH 90
PP N P N PPNY + PPN+
Sbjct: 103 PPQNQRSGGQAPQNGPPPNYNSHQQMPPNN 132
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 62 PPPNHEQIPSEP-NQEPPNYGEQDRFPPNH 90
PP N P N PPNY + PPN+
Sbjct: 103 PPQNQRSGGQAPQNGPPPNYNSHQQMPPNN 132
>Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical
protein F44A6.1b protein.
Length = 467
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 57 VNQQRPPPNHEQIP----SEPNQEPPNYGEQDRFPPNHN 91
VN PP + Q P +P Q+PP Q PP H+
Sbjct: 415 VNANPPPVQNAQPPVQQQQQPPQQPPQQPPQQNLPPVHH 453
>Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical
protein F44A6.1a protein.
Length = 453
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 57 VNQQRPPPNHEQIP----SEPNQEPPNYGEQDRFPPNHN 91
VN PP + Q P +P Q+PP Q PP H+
Sbjct: 401 VNANPPPVQNAQPPVQQQQQPPQQPPQQPPQQNLPPVHH 439
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 57 VNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGYRPPNGQN 100
VN PP + + P P G + P + YRPP+G N
Sbjct: 116 VNDNGPPSSRPRKPEPPTMPRTIQGFRAPPPAATSTYRPPHGSN 159
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 60 QRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGY 93
+RPPP H Q P E E Y + P N Y
Sbjct: 646 KRPPPPHRQTPHELYPEEQPYVRRPPPPQNRGNY 679
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 59 QQRPPPNHEQ--IPSEPNQEPPNYGEQDRFPP 88
Q RPPP Q IP + Q+PP +Q + PP
Sbjct: 614 QFRPPPQQSQQPIPPQQQQQPPAPPQQLQQPP 645
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 254 PTTENPKQPDKTPNYEQNGNQNSNIEKTTKNPDQPLFIPLNPNEYTYGGDKIEVTAPKRD 313
P E+P +P++ E + + + T++P PL PN+ K+ AP +
Sbjct: 436 PWEEDPDEPEEP---EADFTMPAKKKPDTEDPADPLG---GPNKKD---PKLAKKAPTKK 486
Query: 314 TNDKPKPADEDDE 326
DKPKP++E ++
Sbjct: 487 PADKPKPSEEPEK 499
>AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin
protein.
Length = 456
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 57 VNQQRPPPNHEQIP----SEPNQEPPNYGEQDRFPPNHN 91
VN PP + Q P +P Q+PP Q PP H+
Sbjct: 404 VNANPPPVQNAQPPVQQQQQPPQQPPQQPPQQNLPPVHH 442
>AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 34,
isoform a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 49 FNVHG---QFGVNQQRPPPNHEQIPSEPNQEPPNYGEQDRFPPNHNGY 93
FN+ G Q G Q P ++P + Q+PP Q PPN N +
Sbjct: 669 FNMEGSPAQMGYIQTANKPLDMEMPMQ--QQPPQQPPQQMLPPNQNAF 714
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.310 0.136 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,651,797
Number of Sequences: 27539
Number of extensions: 385144
Number of successful extensions: 1061
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 990
Number of HSP's gapped (non-prelim): 96
length of query: 336
length of database: 12,573,161
effective HSP length: 82
effective length of query: 254
effective length of database: 10,314,963
effective search space: 2620000602
effective search space used: 2620000602
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 60 (28.3 bits)
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