Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001033-TA|BGIBMGA001033-PA|IPR000301|CD9/CD37/CD63
antigen, IPR008952|Tetraspanin
(238 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 8e-24
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 95 3e-20
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 69 3e-12
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 54 8e-08
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 54 1e-07
SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 49 4e-06
SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08) 47 1e-05
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 47 2e-05
SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08) 47 2e-05
SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13) 43 2e-04
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 43 2e-04
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 41 0.001
SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10) 40 0.002
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 39 0.003
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_38920| Best HMM Match : Tetraspannin (HMM E-Value=3.5e-07) 38 0.007
SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2) 36 0.039
SB_40980| Best HMM Match : ANF_receptor (HMM E-Value=0.00014) 31 0.84
SB_474| Best HMM Match : dsrm (HMM E-Value=3.2e-20) 31 0.84
SB_46676| Best HMM Match : UPF0259 (HMM E-Value=5.2) 29 2.6
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 29 3.4
SB_34457| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_32373| Best HMM Match : Cys_knot (HMM E-Value=8.9) 28 7.8
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 107 bits (257), Expect = 8e-24
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 3/211 (1%)
Query: 24 GVLGVGVWNVTYRHHYVSLLPTITYPAIGYLLVIAGSFGLPFAALGCCGLKTENRTSLLC 83
G++GVG++ YV L ++ Y +++ G+F + GCCG E+R L
Sbjct: 299 GLMGVGIYVQLKIGDYVEL-QSVKYITGSIIIIAVGAFIALVSFFGCCGAIKEHRCLLAT 357
Query: 84 YTYFLLITFIXXXXXXXXXXXXXXXXXXXXXXXXNSTFTT-NYALDTAVTDAVDSMQTEF 142
+ L I N T + +TDA D++Q +
Sbjct: 358 FFALLFIILAVEITGTALGYVYRNKVEEQLGKDMNDTIVSYGEKGKEGITDAYDAIQKKE 417
Query: 143 KCCGAIRYEDWRKSRWHEHDPRLLVPDSCCKTRTQRCGTRDHPSNIYYTGCIHHFTNHIR 202
KCCG ++DW++S ++ +VPDSCCKT ++ CG ++IY GC ++
Sbjct: 418 KCCGINGFKDWQRS-YYTKGNHSIVPDSCCKTVSKGCGINFKENDIYTKGCFDTVKTLLK 476
Query: 203 DQLIILAAVGVGMSVIPIFGFLFSCVLYVKI 233
D LII+ +G+G++VI I +F+ VL KI
Sbjct: 477 DNLIIIGGIGIGVAVIQILAMIFAMVLVCKI 507
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 95.5 bits (227), Expect = 3e-20
Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 13/223 (5%)
Query: 25 VLGVGVWNVTYRHH----YVSLLPTITYPAIGYLLVIAGSFGLPFAALGCCGLKTENRTS 80
+ +GVW ++ + Y L TI Y L ++ G + A L CCG E++
Sbjct: 28 IFAIGVWIISSKDEVAGDYSRLTGTINYKTAPILCIVIGIVTVIVAFLACCGALKESQCM 87
Query: 81 LLCYTYFLLITFIXXXXXXXXXXXXXXXXXXXXXXXXNSTFTTN-YALD--TAVTDAVDS 137
L TYF L+T I + T N Y L AVT A+D
Sbjct: 88 L--GTYFGLVTAIFCLEVTAIVLAYVYRERIEKNLHGDIRSTMNEYHLSGHDAVTRAIDE 145
Query: 138 MQTEFKCCGAIRYEDWRKSRWHEHDPRLLVPDSCCKTRT-QRCGTR--DHPSNIYYTGCI 194
+ +FKCCG +Y DW +++W + P +VP SCCK + +C P+ IY GC
Sbjct: 146 IHRDFKCCGNAQYRDWFETKWAKTHPD-MVPRSCCKDPSDSKCNENISKDPTKIYRRGCY 204
Query: 195 HHFTNHIRDQLIILAAVGVGMSVIPIFGFLFSCVLYVKIKHVI 237
++ + L +++ G+ ++VI + G +F+ L I+ ++
Sbjct: 205 MFVKKYLSNNLHVISGFGIWIAVIQLMGIIFATCLCCHIRTIL 247
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 86.2 bits (204), Expect = 2e-17
Identities = 60/199 (30%), Positives = 86/199 (43%), Gaps = 10/199 (5%)
Query: 25 VLGVGVWNVTYRHHYVSLLPTITYPAIGYLLVIAGSFGLPFAA-LGCCGLKTENRTSLLC 83
+ GVG+W T YV + ++ Y A G +VIA F + A LGCCG EN+ L+C
Sbjct: 28 LFGVGIWASTKLGAYVEIA-SVNY-ATGPRVVIAVGFIIALVAFLGCCGAWKENKCMLIC 85
Query: 84 YTYFLLITFIXXXXXXXXXXXXXXXXXXXXXXXXNSTFTTNYALDTAVTDAVDSMQTEFK 143
+ FLL+ I NY +++ MQT+FK
Sbjct: 86 FFAFLLLLLILEIVGGALAYNNKDKIENRLDKDILKAIE-NYPGKNE--KSINDMQTKFK 142
Query: 144 CCGAIRYEDWRKSRWHEHDPRLLVPDSCCKTRTQRCGTR--DHPSNIYYTGCIHHFTNHI 201
CCGA Y DW+ + ++ VPDSCCK+ CG P +IY GC I
Sbjct: 143 CCGADNYTDWQSNIKMKNSSS--VPDSCCKSEKAGCGVGGVKDPKDIYTKGCFTIIKGEI 200
Query: 202 RDQLIILAAVGVGMSVIPI 220
L + + + + VI +
Sbjct: 201 EKSLKPIGGLAIAVLVIQV 219
Score = 68.5 bits (160), Expect = 5e-12
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 133 DAVDSMQTEFKCCGAIRYEDWRKSRWHEHDPRLLVPDSCCKTRTQRC--GTRDHPSNIYY 190
+AVD MQ KCCG YEDW+ S VPDSCC T + C G R P+ IY
Sbjct: 240 NAVDDMQKTVKCCGITTYEDWKSS--DNLGLTDNVPDSCCTTVEKDCGMGQRKTPTRIYK 297
Query: 191 TGCIHHFTNHIRDQLIILAAVGVGMSVIPIFGFLFSCVLYVKI 233
GC I + L+ + AV + + VI + +F+ L +I
Sbjct: 298 EGCYMKIKKDIDNNLVAVGAVTITILVIQLLAMIFAMFLVCRI 340
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 133 DAVDSMQTEFKCCGAIRYEDWRKSRWHEHDPRL-LVPDSCCK-TRTQRCGTR--DHPSNI 188
DA + MQ KCCG+ Y DW W + + VP+SCCK T+ + C HP I
Sbjct: 271 DAWNDMQKNLKCCGSRNYTDWFMVAWAGPNTKNGSVPESCCKDTKVKSCNLEVLSHPETI 330
Query: 189 YYT-GCIHHFTNHIRDQLIILAAVGVGMSVIPIFGFLFSCVL 229
GC + D+L+I+ V +G++V + G FSC L
Sbjct: 331 NSEQGCYGAAVKYFEDKLVIIGGVALGLAVFQLIGIAFSCCL 372
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 25 VLGVGVWNVTYRHHYVSLLPTITYPAIGYLLVIAGSFGLPFAALGCCGLKTENRTSLL 82
VL VG+W Y+ L + Y Y+L+ G +GCCG E+ T LL
Sbjct: 191 VLAVGIWARIQFSDYMKL-SSHDYATAAYILIGIGFLIAIIGFIGCCGALKEH-TCLL 246
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 56.8 bits (131), Expect = 1e-08
Identities = 56/229 (24%), Positives = 89/229 (38%), Gaps = 21/229 (9%)
Query: 10 TALLAKKKKVKPRAGVL--GVGVWNVTYRHHYVSLLPTI-TYPAIGYLLVIAGSFGLPFA 66
TA + + ++ G L VG++ + Y I T PA ++V F L F+
Sbjct: 4 TATVTHTRVIRTLVGCLLVSVGLYARFEKTAYQEFFSDILTDPAFALIIVGGIMFILGFS 63
Query: 67 ALGCCGLKTENRTSLLCYTYFLLITFIXXXXXXXXXXXXXXXXXXXXXXXXNSTFTTNYA 126
GC G EN L ++ L I F T T Y
Sbjct: 64 --GCIGALRENICLLKFFSVVLAIIFFLQLALGVFVFVFQDKVEAVIVEKLQ-TAVTKYR 120
Query: 127 LDTAVTDAVDSMQTEFKCCGAIRYEDWRKSRWHE----HDPRLLVPDSCC--KTRTQRCG 180
+ + + +D +Q EFKCCGA DW K+ + VP SCC T ++CG
Sbjct: 121 DNADLQNLIDGVQQEFKCCGAKGINDWDKNIYFNCSSPGSEACGVPYSCCIKDTINRQCG 180
Query: 181 ---------TRDHPSNIYYTGCIHHFTNHIRDQLIILAAVGVGMSVIPI 220
T D I+ GC++ + + +II+ VG++++ +
Sbjct: 181 YGIRKSGTPTSDQSKIIFIGGCVNAVKDWFKSNMIIIGGAAVGIALLQV 229
>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 138 MQTEFKCCGAIRYEDWRKSRW-HEHDPRLLVPDSCCKTRTQR--CGTRDHPSNIYYTGCI 194
M KCCG R DW S+W + + +VP SCC + C D +Y +GC+
Sbjct: 342 MLATLKCCGGERPGDWLGSKWKRDLNKDKIVPLSCCTENANKTTCYKDDTYKEVYSSGCV 401
Query: 195 HHFTNHIRDQLIILAAVGVGMSVI 218
+ + +I++ A+ VG+S++
Sbjct: 402 NELKTFVDKHMILIGAIAVGISIV 425
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 25 VLGVGVWNVTYRHHYVSLLPTITYPAIGYLLVIAGSFGLPFAALGCCGLKTENRTSL 81
VLG+G+W + S L + Y + ++ AG+F GCCG E+R L
Sbjct: 287 VLGIGIWTKVDAGQFDSFLGSSGYSIPAWTMIGAGAFVTFVGFFGCCGAVKESRCML 343
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 132 TDAVDSMQTEFKCCGAIRY-EDWRKSRWHEHDPRLLVPDSCCKTRTQRCGTRDHPSNIYY 190
T AVD Q+ FKCCGA + +DW + W + + VP+SCCK + C S+ YY
Sbjct: 534 TKAVDRAQSIFKCCGATQGPKDWANTAWAKSNTNQTVPESCCKKKAAGCNGAPADSDTYY 593
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 25 VLGVGVWNVTYRHHYVSLLPTITYPAIGYLLVIAGSFGLPFAALGCCGLKTENRTSLL 82
V+ VG+W + Y SL+ + A +++ AG+ + +GCCG EN+ LL
Sbjct: 172 VMSVGIWTRVSANEYASLMGQSGFTAAANIMIAAGALVMFIGFVGCCGAVKENKCFLL 229
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/117 (27%), Positives = 46/117 (39%), Gaps = 1/117 (0%)
Query: 25 VLGVGVWNVTYRHHYVSLLPTITYPAIGYLLVIAGSFGLPFAALGCCGLKTENRTSLLCY 84
+L VG+W +T R Y SLL Y + L++ AG + +GC + ENR L+ Y
Sbjct: 33 ILAVGIWVITSRSQYNSLLSNDNYVTVPGLMIAAGCLVIIVCVVGCVAVIKENRFILVSY 92
Query: 85 TYFLLITFIXXXXXXXXXXXXXXXXXXXXXXXXNSTFTTNYALDTAVTDAVDSMQTE 141
L++ FI Y AVT A+D +Q E
Sbjct: 93 LIMLVLIFILEIATGVVAVIYRSEISYELEVGIRGKM-NRYGFTDAVTKAIDDLQKE 148
>SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 121 FTTNYALDTAVTDAVDSMQTEFKCCGAIRYEDWRKSRWHEHDPRLL----VPDSCC---K 173
F +Y D + +A+D +Q+ KCCG Y DW +++ + + VP SCC +
Sbjct: 56 FVVHYQDDLDLQNAIDGIQSNLKCCGGYSYHDWNHNKYFNCSAQAVEACGVPHSCCVEDQ 115
Query: 174 TRTQRCG--------TRDHPSNIYYTGCIHHFTNHIRDQLIILAAVGVGMSVI 218
TQ CG + S IY GC+ ++ + + L I+ + G + I
Sbjct: 116 INTQ-CGFGVRREKSVLEASSVIYVRGCVDSLSDWMVENLHIIGGLAFGFAAI 167
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 131 VTDAVDSMQTEFKCCGAIRYEDWRKSRWHEHDPRLLVPDSCCKTRTQRCG 180
VT A D++Q + KCCG Y DW+ S+ +++ VPDSCC + CG
Sbjct: 146 VTKAFDALQEKQKCCGVNGYLDWKASK--KYNGTSTVPDSCCVVKADGCG 193
>SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08)
Length = 357
Score = 47.2 bits (107), Expect = 1e-05
Identities = 48/191 (25%), Positives = 69/191 (36%), Gaps = 16/191 (8%)
Query: 50 AIGYLLVIAGSFGLPFAALGCCGLKTENRTSLLCYTYFLLITFIXXXXXXXXXXXXXXXX 109
AI +VI G+ LGC + + ++ + ITF
Sbjct: 98 AISLTVVIFGAASFILCTLGCSRKPSIKQLRFYRSSFVIFITFEIIVMVFGIIQSSRVPT 157
Query: 110 XXXXXXXXNSTFTTNYALDTAVTDAVDSMQTEFKCCGAIRYEDWRKSRWHEHD----PRL 165
S F NY D ++ D +DS+Q KCCG Y DW + ++ R
Sbjct: 158 DTREIVNW-SVFILNYQ-DDSIRDDLDSIQKNLKCCGFKDYNDWELNPYYSCKSNGYSRC 215
Query: 166 LVPDSCCK--TRTQRC--GTRDHPSN------IYYTGCIHHFTNHIRDQLIILAAVGVGM 215
VP SCCK RC G RD I+ GC+ + + I+L+ M
Sbjct: 216 SVPASCCKLDISGSRCTLGVRDATKTSEIGQFIHKNGCLDTIKDWYKYTFILLSFALSFM 275
Query: 216 SVIPIFGFLFS 226
S F +S
Sbjct: 276 SAAQTFILYYS 286
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 9/119 (7%)
Query: 69 GCCGLKTENRTSLLCYTYFLLITFIXXXXXXXXXXXXXXXXXXXXXXXXNSTFTTNYALD 128
GC G EN L Y F+ I + +Y D
Sbjct: 90 GCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAFLQREKLVDPKARLEDGL--KSYQQD 147
Query: 129 TAVTDAVDSMQTEFKCCGAIRYEDWRKSRWHEHDPRLL----VPDSCCKTRTQ---RCG 180
++ + +D +QT FKCCG Y+DW+ +R+ + VP SCCK Q +CG
Sbjct: 148 SSKQEFIDFIQTRFKCCGIESYKDWQANRYFSCSSPVPTACGVPFSCCKKSIQGNRQCG 206
>SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08)
Length = 542
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 125 YALDTAVTDAVDSMQTEFKCCGAIRYEDWRKSRW-HEHDPRLLVPDSCCKTRTQRCG--- 180
Y VT+ +D+ Q CCG Y DW S W VP SCCK CG
Sbjct: 136 YGEHPGVTEMIDNTQMGSMCCGVTDYRDWFTSGWAARQGVSNRVPSSCCKVPVPTCGWDM 195
Query: 181 -TRDHPSNIYYTGC--IHHFTNHIRDQLIILAAVGVGMSVIPIFGFL 224
++ I GC +++ N D+L ++ G+G++ + + L
Sbjct: 196 DVKNPVDVINIIGCSGLNYAQN---DRLRVIGGGGLGLAFVHLLSVL 239
>SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13)
Length = 174
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 132 TDAVDSMQTEFKCCGA-IRYEDWRKSRWHEHDPRLLVPDSCCKT--RTQRCGTRDHPSN- 187
T VDS+Q +CCGA DW ++ VPDSCCK R + CG +N
Sbjct: 84 TRVVDSIQERLQCCGADSGPNDWMNNKHFLQSAS--VPDSCCKQEYREKDCGLGQIIANT 141
Query: 188 -IYYTGCIHHFTNHIRDQLIILAAVGVGMSVI 218
I+ C + N + D++ +A G+ + ++
Sbjct: 142 RIHTEPCASKYKNMLDDKVDAIAGFGLAVLIL 173
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/144 (26%), Positives = 50/144 (34%), Gaps = 16/144 (11%)
Query: 44 PTITYPAIGYLLVIAGSFGLPFAALGCCGLKTENRTSLLCYTYFLLITFIXXXXXXXXXX 103
P + + IG L+ G FG C G EN L Y + + I
Sbjct: 77 PVVIFFVIGILMFFIGFFG-------CVGALRENTCFLTVYGTSVFLCLILLIACGAVAY 129
Query: 104 XXXXXXXXXXXXXXNSTFTTNYALDTAVTDAVDSMQTEFKCCGAIRYEDWRKSRWHE-HD 162
Y D D +D MQT KCCG Y+DW+ + +
Sbjct: 130 TQKDKVQALKERLKQDL--KKYLDDPLNQDLIDFMQTLLKCCGVESYKDWQANPYFNCSS 187
Query: 163 PRLL---VPDSCCKTRTQ---RCG 180
P + VP SCCK Q +CG
Sbjct: 188 PGRMSCGVPFSCCKESIQFNRQCG 211
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 42.3 bits (95), Expect = 3e-04
Identities = 49/233 (21%), Positives = 85/233 (36%), Gaps = 21/233 (9%)
Query: 23 AGVLGVGVWNVTYRHHYVSLLPTITY-PAIGYLLVIAGSFGLPFAALGCCGLKTENRTSL 81
A +L VG++ ++ L + + PA+ +L + G GC G ENR L
Sbjct: 76 AVILAVGIFIFIEMKEEITKLADLNFQPAVIFLAL--GGLLFVITIFGCIGALRENRCLL 133
Query: 82 LCYTYFLLITFIXXXXXXXXXXXXXXXXXXXXXXXXNSTFTTNYALDTA--VTDAVDSMQ 139
Y + I Y T + +D++Q
Sbjct: 134 TAYIWMCGIILAGMIVCGGLGFYYKDVLETKVTAQLKDAIVL-YRDPTKGDLHLIIDTVQ 192
Query: 140 TEFKCCGAIRYEDWRKSRWHEHD----PRLLVPDSCCKTRTQ---RC--GTRDHPSN--- 187
TE +CCG DW + + R VP SCC+ Q +C G R P++
Sbjct: 193 TELQCCGVQGLNDWDANIYFNCSGPARERCGVPYSCCRKDLQENRQCGYGARSVPTSQAK 252
Query: 188 ---IYYTGCIHHFTNHIRDQLIILAAVGVGMSVIPIFGFLFSCVLYVKIKHVI 237
I+ GC+ I L ++ +GVG+ ++ + + L ++ ++
Sbjct: 253 ENGIFTEGCVKTGIAWINTNLYLIGGIGVGILILQLATICLAQTLKAQVNALV 305
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/133 (25%), Positives = 49/133 (36%), Gaps = 9/133 (6%)
Query: 54 LLVIAGSFGLPFAALGCCGLKTENRTSLLCYTYFLLITFIXXXXXXXXXXXXXXXXXXXX 113
LL+ G A GCCG EN+ L+ + + LL+ +
Sbjct: 409 LLIAVGCIITIIAFFGCCGAWKENKCMLILF-FILLLIVLGLEIAAAVLGYINKDKIQSD 467
Query: 114 XXXXNSTFTTNYALDTAVTDAVDSMQTEFKCCGAIRYEDWRKSRWHEHDPRLLVPDSCC- 172
Y + A+D+MQ +F+CCGA DW ++ P SCC
Sbjct: 468 LTDDIIRNIKEYPKNNKA--AIDAMQMDFECCGAKGPSDW---TFYGQMKYKAGPGSCCG 522
Query: 173 KTRTQRC--GTRD 183
K C GTR+
Sbjct: 523 KPNNDACLPGTRN 535
>SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10)
Length = 691
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 17/85 (20%)
Query: 134 AVDSMQTEFKCCGAIRYEDWRKSRWHEHDPRLLVPDSCCKTRTQRCGTRDHPSNIYYTGC 193
A+D +Q EFKCCG YED S H + VP SC +D ++ C
Sbjct: 454 AMDKVQGEFKCCG---YED---SNDHGYK-NSTVPKSC----------KDTNGTVFSKNC 496
Query: 194 IHHFTNHIRDQLIILAAVGVGMSVI 218
+ ++D LI++ VG+G++ +
Sbjct: 497 VKGLEKFLKDHLIVVGGVGIGIAFV 521
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 16/118 (13%)
Query: 135 VDSMQTEFKCCGAIRYEDWRKSRWHE----HDPRLLVPDSCCKTRTQ---RCG------- 180
+D +QT KCCG Y DW+ + + VP SCCK Q +CG
Sbjct: 162 IDRLQTNLKCCGINSYNDWQTNVYFNCSSPGSESCGVPFSCCKESIQLNRQCGYDAGRMK 221
Query: 181 --TRDHPSNIYYTGCIHHFTNHIRDQLIILAAVGVGMSVIPIFGFLFSCVLYVKIKHV 236
+Y GC + I D L ++ + + ++ I G + +I+ V
Sbjct: 222 TDAERLEKGVYSKGCWKTAISFIMDNLYLVIGITAAVLILIIVGSCMAFSFRAQIREV 279
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 38.7 bits (86), Expect = 0.004
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 16/118 (13%)
Query: 135 VDSMQTEFKCCGAIRYEDWRKSRWHE----HDPRLLVPDSCCKTRTQ---RCG------- 180
+D +QT KCCG Y DW+ + + VP SCCK Q +CG
Sbjct: 162 IDRLQTNLKCCGVNSYTDWQTNIYFNCSSPGSESCGVPFSCCKESIQLNRQCGYDAGRMK 221
Query: 181 --TRDHPSNIYYTGCIHHFTNHIRDQLIILAAVGVGMSVIPIFGFLFSCVLYVKIKHV 236
+Y GC + I D L ++ + + ++ I G + +I+ V
Sbjct: 222 TDAERLEKGVYSKGCWTIAISFIMDNLYLVVGITAAVLILIIVGSCMAFSFRAQIREV 279
>SB_38920| Best HMM Match : Tetraspannin (HMM E-Value=3.5e-07)
Length = 219
Score = 37.9 bits (84), Expect = 0.007
Identities = 41/209 (19%), Positives = 74/209 (35%), Gaps = 22/209 (10%)
Query: 28 VGVWNVTYRHHYVSLLPTITYPAIGYLLVIAGSFGLPFAALGCCGLKTENRTSLLCY--- 84
+G W + +R+ + LL + + I L++ G + GC G E+R L+ +
Sbjct: 4 LGTWTLIHRNEFNILLDSSWFVIIVGLMIGIGGVVVLICTCGCYGTVKEHRYLLISFLIM 63
Query: 85 ----TYFLLITFIXXXXXXXXX-------XXXXXXXXXXXXXXXNSTFTT-----NYALD 128
T FL++ I + +TT +Y +
Sbjct: 64 RSIFTQFLIMRSIFTQFLIMLTLVLIVQISVGVIAFVHRAELTHDMKYTTRRRMSDYGVR 123
Query: 129 TAVTDAVDSMQTEFKCCGAIRYEDWRKSRWHEHDPRLLVPDSCCKTRTQRCGTRDHPSNI 188
VT A+D MQ FKCCG ++W + + + R G
Sbjct: 124 QDVTKAIDQMQINFKCCGE---DNWSRGTRRPGNKAPITRSQTPAVRHHLLGVARGTIRP 180
Query: 189 YYTGCIHHFTNHIRDQLIILAAVGVGMSV 217
YT H+ + +++ +G+ M+V
Sbjct: 181 TYTARHFHYLEKLMSFMVLFQLIGLIMTV 209
>SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 192 GCIHHFTNHIRDQLIILAAVGVGMSVIPIFGFLFSCVLYVKI 233
GC+ ++D L+I+ VGVG++VI I F+ VL KI
Sbjct: 92 GCLGTIMKLLKDNLMIVGGVGVGVAVIQILAMTFAMVLICKI 133
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 26 LGVGVWNVTYRHHYVSLLPTITYPAIGYLLVIA-GSFGLPFAALGCCGLKTENRTSL 81
+ VG++ Y+ L ++ Y A GY++VIA G+ + GCCG E+R L
Sbjct: 1 MAVGIYVQLKTGDYIDL-QSVKY-ATGYIIVIAAGALIALISFFGCCGAIKESRCLL 55
>SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2)
Length = 108
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 124 NYALDTAVTDAVDSMQTEFKCCGAIRYEDWRKSRWHE----HDPRLLVPDSCC 172
NY + + + +D +Q FKCCG+ DW +R+ + VP +CC
Sbjct: 50 NYRDNLDLQNIIDGIQENFKCCGSSSINDWDANRYFKCGGPSPEECGVPHTCC 102
>SB_40980| Best HMM Match : ANF_receptor (HMM E-Value=0.00014)
Length = 735
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 120 TFTTNYALDTAVTDAVDSMQTEFKC-CGAIRYEDWRK 155
TF +A+D+ VT +V ++ +FK AI YE+W+K
Sbjct: 88 TFARTFAVDSKVTPSVIALLKQFKWEIVAIIYEEWKK 124
>SB_474| Best HMM Match : dsrm (HMM E-Value=3.2e-20)
Length = 918
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 151 EDWRKSR-WHEHD--PRLLVPDSCCKTRTQRCG 180
E+WR S WH+ D +++ D CCK + CG
Sbjct: 685 EEWRPSELWHKLDRLAEVIIIDECCKVQVVCCG 717
>SB_46676| Best HMM Match : UPF0259 (HMM E-Value=5.2)
Length = 597
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/16 (75%), Positives = 13/16 (81%)
Query: 28 VGVWNVTYRHHYVSLL 43
+GV N T RHHYVSLL
Sbjct: 335 IGVINTTRRHHYVSLL 350
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 25 VLGVGVWNVTYRHHYVSLLPTITYPAIGYLLVIAGSFGLPFAALGCCGLKTENRTSLL 82
VL VG+W Y+ L + Y Y+L+ G +GCCG E+ T LL
Sbjct: 49 VLAVGIWARIQFSDYMKL-SSHDYATAAYILIGIGFLIAIIGFIGCCGALKEH-TCLL 104
>SB_34457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 43 LPTITYPAIGYLLVIAGSFGLPFAALGCCGLKTENRTSLLCYTYFLLI 90
L ++T + ++L+ A G+ FAA G K E + CYT +L+
Sbjct: 77 LASLTVADLLFVLLAAFDAGIHFAAHGDMACKVEGVLTETCYTALILV 124
>SB_32373| Best HMM Match : Cys_knot (HMM E-Value=8.9)
Length = 349
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 151 EDWRKSRW-HEHDP--RLLVPDSCCKTRT 176
E+WR S H+ DP +L+ D CCK +T
Sbjct: 63 EEWRPSELGHKLDPLAEVLIIDECCKVQT 91
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.327 0.141 0.456
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,364,146
Number of Sequences: 59808
Number of extensions: 272546
Number of successful extensions: 808
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 744
Number of HSP's gapped (non-prelim): 49
length of query: 238
length of database: 16,821,457
effective HSP length: 80
effective length of query: 158
effective length of database: 12,036,817
effective search space: 1901817086
effective search space used: 1901817086
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 59 (27.9 bits)
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