Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001032-TA|BGIBMGA001032-PA|IPR001452|Src homology-3,
IPR001683|Phox-like
(558 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCPJ732.01 |vps5||retromer complex subunit Vps5|Schizosaccharom... 67 5e-12
SPBC887.06c |snx3|grd19|sorting nexin Snx3|Schizosaccharomyces p... 55 2e-08
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 53 9e-08
SPBC1711.11 |||autophagy associated protein |Schizosaccharomyces... 51 5e-07
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 50 9e-07
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 50 1e-06
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 46 1e-05
SPBC14F5.11c |mug186||sorting nexin Snx41|Schizosaccharomyces po... 46 2e-05
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 45 2e-05
SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr 1|||... 45 2e-05
SPAC6F6.12 |||autophagy associated protein Atg24|Schizosaccharom... 42 3e-04
SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 41 5e-04
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 38 0.005
SPAPJ696.02 |||actin cortical patch component Lsb4 |Schizosaccha... 37 0.008
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 33 0.079
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 32 0.18
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 31 0.32
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 31 0.42
SPBC29A3.05 |||chromatin remodeling complex subunit|Schizosaccha... 30 0.97
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.7
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 29 1.7
SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces po... 28 3.0
SPAC1687.20c |mis6||inner centromere protein Mis6|Schizosaccharo... 28 3.9
SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps90... 28 3.9
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 27 5.2
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 27 5.2
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 5.2
SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 27 6.9
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 27 6.9
SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr... 27 6.9
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 27 9.1
SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subu... 27 9.1
SPAC3F10.03 |||glycine tRNA-ligase|Schizosaccharomyces pombe|chr... 27 9.1
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 27 9.1
SPCC584.14 |mug160||conserved eukaryotic protein|Schizosaccharom... 27 9.1
>SPCPJ732.01 |vps5||retromer complex subunit
Vps5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 576
Score = 67.3 bits (157), Expect = 5e-12
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 152 DTSSNYSSSVGTVRKNKFAPSSKISGESYLLATLNVEV-----PDSEKVYIIQDEDGYIW 206
DT SSS + SS+ G + L T N + P S + IQ D +
Sbjct: 153 DTLDAASSSAPNFTHTVSSASSQKQGSTSLTDTENQKAHPAAAPQSLTPFYIQVHDPHTV 212
Query: 207 SPITQPYIVTVASPKKESKFKGIKSFIAYQLTPSFNNIQVSRRYKHFDWLHERLQEKFTL 266
IT+ + V S + E + PS +N+ V RRY F +L++ L
Sbjct: 213 KEITKSHTVYSVSTRLEEHNQ-----------PSVSNVTVQRRYNDFAFLYQLLSNNHPG 261
Query: 267 IPIPPLPDKQISGRYDEQLIERRRVQLQEFVDWMCKHPVLSRSEVWQHFL 316
IPP+P+KQ+ GR+D++ IE+RR L+ + + HPVL ++ FL
Sbjct: 262 CIIPPIPEKQVVGRFDDEFIEQRRAALEVMLRKISAHPVLRDDYSFKLFL 311
>SPBC887.06c |snx3|grd19|sorting nexin Snx3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 55.2 bits (127), Expect = 2e-08
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 242 NNIQVSRRYKHFDWLHERLQEKFTLIPIPPLPDKQISGRYDEQLIERRRVQLQEFVDWMC 301
+N V RRY F+ H+ L+ + + IPPLP K + R+ + +IE RR L+ F+ +
Sbjct: 59 HNSSVRRRYSEFEKFHDMLERESGRVSIPPLPGKIFTQRFRDDVIEERRQGLENFLRLVA 118
Query: 302 KHPVL-SRSEVWQHFLTCTDEK 322
HP++ + S V FL + K
Sbjct: 119 GHPLIQTHSRVLSSFLQSPEFK 140
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 53.2 bits (122), Expect = 9e-08
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 4 QVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKLTPE 63
+V A+YDF G P ++ GEV+ +L + WW G+ NG+ G+FP+ YVR L +
Sbjct: 144 RVLAMYDFPG-PDAGDLGFHAGEVIIVLE-HVNNDWWRGEL-NGKEGIFPSNYVR-LLED 199
Query: 64 ESIQTKAAPPAPR 76
+++ + PP P+
Sbjct: 200 SAVKAQPPPPPPQ 212
>SPBC1711.11 |||autophagy associated protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 390
Score = 50.8 bits (116), Expect = 5e-07
Identities = 44/168 (26%), Positives = 65/168 (38%), Gaps = 18/168 (10%)
Query: 231 SFIAYQLT-----PSFNN--IQVSRRYKHFDWLHERLQEKFTLIPIPPLPDKQI-----S 278
+F++Y++ P F + V RRYK F+ LH L + IPPLP K
Sbjct: 19 TFVSYEIETESDLPVFEDKKFSVRRRYKDFEMLHNILSHDYNGYAIPPLPRKYTVSSFSG 78
Query: 279 GRYDEQLIERRRVQLQEFVDWMCKHPVLSRSEVWQHFLTCTDEKRWKAGKRQA--EKDNL 336
G I RR LQ F+D HPV+S S H + WK+ A + +N
Sbjct: 79 GSLSPIFIARRMQSLQTFLDRCSTHPVISNS---MHMYQFLENNSWKSYYHNAWMQSENT 135
Query: 337 LGLNYCVSLVVPEKAL-LQSQVDHITEQCHTFINSVDTAIKSVSSMCI 383
VS + L + E + + DT + + C+
Sbjct: 136 KSKGNNVSGGIESSIQNLDPYAQSLYETAKQLLQNADTDLSKLEKTCV 183
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 50.0 bits (114), Expect = 9e-07
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 235 YQLTPSFNNIQVSRRYKHFDWLHERLQEKFTLIPIPPLPDKQISGR--YDEQLIERRRVQ 292
Y ++ S N +V RRY F WLH L +K+ +P +P K+ + +Q
Sbjct: 306 YIISDSSNTREVLRRYSDFFWLHSYLMKKYPFRRVPLIPLKKFHSKCFNSKQFFRTPPPG 365
Query: 293 LQEFVDWMCKHPVLSRSEVWQHFLTCTDE-KRWK 325
L +FV+ + HP+ S EV + F T + K W+
Sbjct: 366 LSDFVNDLSHHPIFSNDEVVRVFFTEPNVFKNWR 399
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 1 MATQ--VQALYDFTGEPGTTEMSITCGE--VLTLLNTEIGEGWWEGKKSNGETGLFPAAY 56
MA+Q V AL+ F G+ + E+ + G +L ++ E G+GWWEG+ G G+FPA++
Sbjct: 1 MASQRFVIALHSFPGK-SSDELPLVEGRKYLLIKMDEEFGDGWWEGEDEQGNRGIFPASH 59
Query: 57 VRKLTPEES 65
V ++ E S
Sbjct: 60 VELISDERS 68
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 3 TQVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKLTP 62
T +YD++ E E+ + E + +L + +GWW G+ S G+ GLFP+ YV P
Sbjct: 728 TPAIVIYDYSPEE-ENEIELVENEQIQILEF-VDDGWWLGENSKGQQGLFPSNYVEITGP 785
Query: 63 EESIQTKAAPP 73
E+ A P
Sbjct: 786 NETANNPPAEP 796
Score = 36.7 bits (81), Expect = 0.008
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 5 VQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKL 60
V+A+YD+ + E+S E++ ++ + WWEG+ +G GLFP+ YV ++
Sbjct: 805 VKAIYDYQAQEDN-ELSFFEDEIIANVDC-VDPNWWEGE-CHGHRGLFPSNYVEEI 857
>SPBC14F5.11c |mug186||sorting nexin Snx41|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 586
Score = 45.6 bits (103), Expect = 2e-05
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 18/175 (10%)
Query: 154 SSNYSSSVGTVRKNKFAPSSKISGESYLLATLNV--EVPDSEKVYIIQDEDGYIWSPITQ 211
S N S+S + K PS S ++ E S ++ +D D + S +
Sbjct: 13 SDNRSASSAVNVEPKVEPSQHQGSSSVKENAISQPNESFQSRNMFFQKDVDSVVDSALDP 72
Query: 212 PYIVTVASPKKESKFKGIKSFIAYQLTPSFNNIQVSRRYKHFDWLHERLQEKFTLIPIPP 271
IV + K ES S I Y + + ++ RY F L +L + +PP
Sbjct: 73 NGIVITGAMKAESG-----SHIVYII--KLQDSEIHHRYSEFASLRVQLSRLYPTCLVPP 125
Query: 272 LPDKQ---------ISGRYDEQLIERRRVQLQEFVDWMCKHPVLSRSEVWQHFLT 317
LPDK + +++E R+ LQ F+ + +HP+L SEV++ FL+
Sbjct: 126 LPDKHKIMDYLINVTKNQRMSRMLEERKRLLQLFLRRVAQHPILGLSEVFRKFLS 180
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 45.2 bits (102), Expect = 2e-05
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 2 ATQVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYV 57
++ V+ALY +T + E+SI G+++ + N G GW EG NG TG FPA YV
Sbjct: 586 SSYVKALYAYTAQ-SDMELSIQEGDIIQVTNRNAGNGWSEG-ILNGVTGQFPANYV 639
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 8 LYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVR 58
LYDFTGE ++ + G+ TLL + G GW K +G GL PA+YV+
Sbjct: 523 LYDFTGEHEGV-ITASEGQEFTLLEPDDGSGWVR-VKIDGTDGLIPASYVK 571
>SPAC3C7.10 |pex13||peroxin-13|Schizosaccharomyces pombe|chr
1|||Manual
Length = 288
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 6 QALYDFTGEPGTTEMSITCGEVLTLLNTEIGEG----WWEGKKSNGETGLFPAAY 56
+A Y+F EMS+ G+++ +L+ +G WW+G+K +GETG FP+ Y
Sbjct: 228 KADYEFMSRDPGVEMSLKKGDIIAILSKTDTQGNPCEWWQGRKRSGETGWFPSNY 282
>SPAC6F6.12 |||autophagy associated protein
Atg24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 41.5 bits (93), Expect = 3e-04
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 16/202 (7%)
Query: 245 QVSRRYKHFDWLHERLQEKFTLIPIPPLPDKQI-----SGRYDEQLIERRRVQLQEFVDW 299
+V RR+ F L E L +PPLP K GR+ + I RR L ++
Sbjct: 56 KVRRRFSDFVKLQEILSRMNEDCVVPPLPAKHKLEYIKGGRFSDNFINRRAKLLNRYITR 115
Query: 300 MCKHPVLSRSEVWQHFLTCTDEKRWKAGKR---QAEKDNLLGLNYCVSLVVPEKALLQSQ 356
HPVL +S HF+ + W R Q + +N L+ ++ + L+ +
Sbjct: 116 CALHPVLHQS---PHFIAFLENPNWNNYVRFFIQPKLNNTSKLDEISDSLLNAFSKLKEE 172
Query: 357 VDHITEQCHTFINSVDTAIKSVSSMCIVQTKRFQGPYKSDCQKIGEAFYSLGNALSLDEG 416
Q + I ++ I + R + +SD + + F L SLD+
Sbjct: 173 PTEFDIQ-RDHVQQFMFGISNLEG-SIQKLLRLEKALESDYEDVSIQFDRLA---SLDQA 227
Query: 417 TIVSTSKLTSAIKMTGGVYIDI 438
V + +A++ TG Y ++
Sbjct: 228 LDVPIESIQNALQQTGTEYANL 249
>SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1010
Score = 40.7 bits (91), Expect = 5e-04
Identities = 20/72 (27%), Positives = 42/72 (58%)
Query: 246 VSRRYKHFDWLHERLQEKFTLIPIPPLPDKQISGRYDEQLIERRRVQLQEFVDWMCKHPV 305
V+RRY+ F LH++L++ + + P K I ++ ++E RR L+E++ + + P
Sbjct: 738 VARRYREFAELHKQLKQTYPGVRSLKFPQKSIITSLNKNVLEYRRGALEEYLQSLFRMPE 797
Query: 306 LSRSEVWQHFLT 317
+ S++ + FL+
Sbjct: 798 VCDSKMLRMFLS 809
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 37.5 bits (83), Expect = 0.005
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 10/59 (16%)
Query: 5 VQALYDFTGEPGT-TEMSITCGEVLTLLNTEIGEGWWEGKK------SNGETGLFPAAY 56
V+ Y F EP T E+ + G++L +L EI EGWW G+K G TG+FP+ Y
Sbjct: 426 VRMKYSF--EPETENELKLKKGDLLLVLK-EIDEGWWVGEKLGEDGVFTGNTGMFPSNY 481
>SPAPJ696.02 |||actin cortical patch component Lsb4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 36.7 bits (81), Expect = 0.008
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 4 QVQALYDFTGE-PGTTEMSITCGEVLTLLNTEIG-EGWWEGKKSNGETGLFPAAYVR 58
Q +A+Y F GE PG ++S G+++ ++ + WW G+ E G+FPA YV+
Sbjct: 375 QARAMYSFAGEQPG--DLSFQKGDIIDIVERSGSHDDWWTGRIGYRE-GIFPANYVK 428
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 33.5 bits (73), Expect = 0.079
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 2 ATQVQALYDFTGEPGTTEMSITCGEVLTLLN-TEIGEGWWEGKKSNGETGLFPAAYVR 58
A V ALYD+ + ++S G+ + +++ T+ WW G+ NG G FP YV+
Sbjct: 409 AEHVVALYDYAAQ-AAGDLSFHAGDRIEVVSRTDNQNEWWIGRL-NGAQGQFPGNYVQ 464
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 32.3 bits (70), Expect = 0.18
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 5 VQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEG---KKSNGETGLFPAAYVRKL 60
V ALYD+ E+S G+ + +L +GWWEG + + G FP+ +VR++
Sbjct: 612 VSALYDYDAAI-PEEISFRKGDTIAVLKL-YEDGWWEGFVVGEDDHNRGQFPSNFVREI 668
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 31.5 bits (68), Expect = 0.32
Identities = 20/98 (20%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 231 SFIAYQLTPSFNNIQVSRRYKHFDWLHERLQEKFTLIPIPPLPDKQI---------SGRY 281
S++ Y++ ++ RRY F+ L + ++ ++ +PP+P KQ +
Sbjct: 39 SYVEYEIVHQKRSVW--RRYSDFESLVKLMRRQYPAAIVPPIPGKQSLLSYAKHPRKAKS 96
Query: 282 DEQLIERRRVQLQEFVDWMCKHPVLSRSEVWQHFLTCT 319
D + + R L+ F+ HP + + ++ F+ T
Sbjct: 97 DAEFLNFRSRMLELFLRQCLLHPCIRSNPIFDKFIHST 134
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 31.1 bits (67), Expect = 0.42
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 139 PGMPINDYNQHIDDTSSNYSSSVGTVRKNKFAPSSKISGESYLLATLN--VEVPDSEKVY 196
P +PIN + + S+ G V KF +SY +++N V++ +++ Y
Sbjct: 167 PHLPINHQGNTWKHANESLQSNQGPVPNTKFVGLETTQTDSYQQSSVNSVVKIEEADATY 226
Query: 197 IIQDEDG 203
+++E G
Sbjct: 227 ALREESG 233
>SPBC29A3.05 |||chromatin remodeling complex
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 139
Score = 29.9 bits (64), Expect = 0.97
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 302 KHPVLSRSEVWQHFLT--CTDEKRWKAGKRQAEKDNLLGLNYCVSLVVPEKALLQSQVDH 359
+H V R + Q + T E++ K EKDN + + + + ++ +L V
Sbjct: 7 EHAVQKRKKQKQRSVVDPVTRERQLKRNLADLEKDNFSDIRFEIPKDLLQRRVLPISVRR 66
Query: 360 ITEQCHTFINSVDTAIKSVSSMCIVQ 385
I TF+N +D S + C+ +
Sbjct: 67 ILSSRKTFVNYLDETPNSRYNTCVAK 92
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 29.1 bits (62), Expect = 1.7
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Query: 185 LNVEVPDSEKVYIIQDEDGYIWSP-ITQPYIVTVASPKKESKFKGIKSFIAYQLTPSF-- 241
+N+E+ D+ K+ + P I + Y++ V ++K K Y + S+
Sbjct: 143 INIELLDTPKLEKDLHKSELQQKPNILEAYVLGVRQ-STQAKMLRTKRVYEYLIKVSYEE 201
Query: 242 NNIQVSRRYKHFDWLHERLQEKFTLIPIPPLPDKQISGRY 281
N ++R+Y F H L + + +P LP K Y
Sbjct: 202 NTFFIARKYSDFSHFHHLLLKSYPNAYVPRLPPKDDHDTY 241
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 231 SFIAYQLTPSFNNIQVSRRYKHFDWLHERLQEKFTLIPIPPLPDKQISGR 280
SF T +FNN + + + DW H L+ K + +PPL + +G+
Sbjct: 4 SFACTTCTVAFNNAESQKIHWKSDWHHYNLKRK--VASLPPLSAEVFAGK 51
>SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 875
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 166 KNKFAPSSKISGESYLLATLNVEVPDSEKVYIIQDED 202
+N+ A + ISGE + T+ + D E+VY+ Q+ED
Sbjct: 839 ENEHAGAEAISGE-IIPDTVEANMEDEEEVYVKQEED 874
>SPAC1687.20c |mis6||inner centromere protein
Mis6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 349 EKALLQSQVDHITEQCHTFINSVDTAIKSVSSMCIVQTKRFQGPYKSD 396
++ L+ S++D I++ H+++ S+ I I+ + P+KSD
Sbjct: 522 QERLMDSRIDAISKFTHSYLKSLSEIILLKEKRAILSFLQLWEPFKSD 569
>SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps901
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 27.9 bits (59), Expect = 3.9
Identities = 22/126 (17%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Query: 424 LTSAIKMTGGVYIDIGRMYDEQPKYDWEPLGDKFHLYKGIAASFPDVLANHKGAVQKKRE 483
L ++ Y + + +D+QP + D+ + Y+ +S + N K ++ K+
Sbjct: 34 LNDSLDEQRNAYNEHCKNHDQQPSQQVRNMEDEANQYEQTDSSSDQEVMNEKQSLDKENR 93
Query: 484 CERLTAENKMEVAQLNEVLRRTDVISYALLAEINHFKSERTVD-IKATMQKFLKQQ--IN 540
+ + EN ++NE + + L ++ +E +K+ + +F K++ +N
Sbjct: 94 NDNIPHENNPGQQEINEPI----FDFHMFLEQLRSSSAEPVAKYLKSFLSEFTKRRWTVN 149
Query: 541 FYKKIV 546
+ K++
Sbjct: 150 YQVKLI 155
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 27.5 bits (58), Expect = 5.2
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Query: 304 PVLSRSEVWQHFLTCTDEKRWKAGKRQAEKDNL---LGLNYCVSLVVP--EKALLQSQVD 358
P+LS++++W F CT K W ++ + L LG+N LVVP E A +D
Sbjct: 356 PLLSQNDLWNIFFLCT--KFWSLHSKKQDILKLYSDLGIN--DDLVVPFCEAASSLDAID 411
Query: 359 HITEQCH 365
+ + H
Sbjct: 412 DLNDYIH 418
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 27.5 bits (58), Expect = 5.2
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 480 KKRECERLTAENKMEVAQLNEVLRRTDVISYALLAEINHFKSERTVDIKATMQKFLKQQI 539
KK + T + E AQL +VLR A H K + K T + LKQQ+
Sbjct: 20 KKLKESGATEHDNTEYAQLCDVLRSAQSEIEARRDLKGHIKRCFSSVDKNTEKLILKQQV 79
Query: 540 NFYKKIVDKL 549
YKK+ L
Sbjct: 80 LAYKKLSQNL 89
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 27.5 bits (58), Expect = 5.2
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Query: 153 TSSNYSSSVGTVRKNKFAPSSKISGESYL-LATLNVEVPDSEKVYIIQDEDGYIWSPITQ 211
+SS Y+SS + N + S+ + SY+ A+ + EV + Y Q S T
Sbjct: 553 SSSVYASSTEALSSNSLSSSTSSASTSYIPSASSSYEVASNSSDYYSQTVSSITASGTTS 612
Query: 212 PYIVTVASPKKES---KFKGIKSFIAYQLTPS 240
V++P S G SF + PS
Sbjct: 613 STSEIVSTPASNSNTGSLNGTSSFNVNSVGPS 644
>SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 619
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 224 SKFKGIKSFIAYQLTP-SFNNIQVSRR--YKHFDWLHERLQEKF 264
SK K S I Y+LT F N + +H++ LH+++++KF
Sbjct: 571 SKIKESTSDIFYELTSMKFENPNEGEKEIVEHYETLHKKIEDKF 614
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 27.1 bits (57), Expect = 6.9
Identities = 19/105 (18%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 142 PINDYNQHIDDTSSNYSSSVGTVRKNKFAPSSKISGESYLLATLNVEVPDSEKVYIIQDE 201
P+++ N +D +++ SSS +V+ A + ++ + ++ S + + +
Sbjct: 142 PVSEVNASLDLNTASRSSSAHSVKSTSSATVTNVTSKKEAISATTSLAQSSPNLASLSKQ 201
Query: 202 DGYIWSPITQ------PYIVTVASPKKESKFKGIKSFIAYQLTPS 240
+ +P T+ + ASP+ + I + YQ PS
Sbjct: 202 PSTVHAPSTRQRDLKSSILSLYASPRPQVSSSSITTNATYQNLPS 246
>SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 515
Score = 27.1 bits (57), Expect = 6.9
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 6/92 (6%)
Query: 464 AASFPDVLANHKGAVQKKRECERLTAENKMEVAQLNEVLRRTDVISYALLAEI----NHF 519
+ FP L + E LTA NKM + + R T I + + N
Sbjct: 279 SVKFPTNLDALNSCTMENHEINELTATNKMNDGPITKCARETINIKNLKTSNLERNQNSP 338
Query: 520 KSERTVDIKATMQKFLKQQINFY--KKIVDKL 549
K++RTV + F +N Y KK +KL
Sbjct: 339 KNKRTVSYERLANSFSFNALNDYNLKKGGEKL 370
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 137 VIPGMPI----NDYNQHIDDTSSNYSSSVGTVRKNKFAPSSKISG 177
V+P P+ ND N+ DD +S + + ++N+ A S SG
Sbjct: 1442 VVPSKPVVEVFNDLNEAFDDENSEDENGINDTKENR-ATESNFSG 1485
>SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1405
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 78 DQAADDWGEQHYSAGDNNYQRGVS 101
D D+W + HYS D+ ++G S
Sbjct: 72 DNGYDEWDQSHYSDEDDENEKGSS 95
>SPAC3F10.03 |||glycine tRNA-ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 652
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 293 LQEFVDWMCKHPVLSRSEVWQHFLTCTDEKRWKAGKRQAEKDN 335
+ +F DWMCK P H + E R K G ++A N
Sbjct: 86 VDKFADWMCKDPATGEIFRADHLVEEVLEARLK-GDKEARGQN 127
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 26.6 bits (56), Expect = 9.1
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 450 WEPLGDKFHLYKGIAASFPDVLAN--HKGAVQKKRECERLTAENKMEVAQLNEVLRRTD 506
W P D H S ++L N H+ +Q +C+ LT K+EV + V+ TD
Sbjct: 2038 WVPHSDTLHFLIKEFRSKRNILLNLEHRMMLQMAPDCDSLTLLQKLEVFEY--VMANTD 2094
>SPCC584.14 |mug160||conserved eukaryotic
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 431
Score = 26.6 bits (56), Expect = 9.1
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 158 SSSVGTVRKNKFAPSSKISGESYLLATLNVEVPDS---EKVY 196
SSS+G + PSS IS +LLA L+ +P EK Y
Sbjct: 268 SSSLGDMEFETSQPSSSISEIIHLLAVLDKRIPKKTLVEKTY 309
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.133 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,482,751
Number of Sequences: 5004
Number of extensions: 102968
Number of successful extensions: 329
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 302
Number of HSP's gapped (non-prelim): 41
length of query: 558
length of database: 2,362,478
effective HSP length: 76
effective length of query: 482
effective length of database: 1,982,174
effective search space: 955407868
effective search space used: 955407868
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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