Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001031-TA|BGIBMGA001031-PA|IPR001978|Troponin
(332 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 38 0.012
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 33 0.27
At4g09950.1 68417.m01628 avirulence-responsive family protein / ... 32 0.47
At3g23100.1 68416.m02912 double strand break repair protein, put... 32 0.47
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 32 0.62
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 31 1.4
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 31 1.4
At4g31570.1 68417.m04483 expressed protein 30 1.9
At4g09940.1 68417.m01627 avirulence-responsive family protein / ... 30 1.9
At4g03620.1 68417.m00497 myosin heavy chain-related contains wea... 30 1.9
At1g68790.1 68414.m07863 expressed protein 30 1.9
At3g29075.1 68416.m03637 glycine-rich protein 30 2.5
At4g26110.1 68417.m03759 nucleosome assembly protein (NAP), puta... 29 3.3
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 29 3.3
At4g19550.1 68417.m02875 expressed protein 29 4.4
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 29 5.8
At4g32190.1 68417.m04581 centromeric protein-related low similar... 29 5.8
At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family pr... 29 5.8
At3g17670.1 68416.m02256 ferredoxin-related contains Pfam PF0051... 29 5.8
At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50... 29 5.8
At2g28620.1 68415.m03479 kinesin motor protein-related 29 5.8
At1g68060.1 68414.m07775 expressed protein 29 5.8
At1g56660.1 68414.m06516 expressed protein 29 5.8
At5g52550.1 68418.m06525 expressed protein 28 7.6
At2g19480.1 68415.m02277 nucleosome assembly protein (NAP), puta... 28 7.6
At1g56040.1 68414.m06434 U-box domain-containing protein contain... 28 7.6
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 37.5 bits (83), Expect = 0.012
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 24 EHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVK 83
E+E + EI SQ N++ K K + + K E + + ++K + N + +
Sbjct: 1158 ENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEED-----R 1212
Query: 84 KKEFTLEEEDKEKKPDWSKGKPGDQKR 110
KK+ ++EE K+K+ K KP D K+
Sbjct: 1213 KKQTSVEENKKQKETKKEKNKPKDDKK 1239
Score = 30.3 bits (65), Expect = 1.9
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 26 EVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLK--VVK 83
E K++Y ++L Q D + + K K+ K ENK K +K++ + +N+ K +
Sbjct: 960 EEDKKEYVNNELKKQ-EDNKKETTKSENSKL-KEENKDNKEKKESEDSASKNREKKEYEE 1017
Query: 84 KKEFTLEEEDKEKKPDWSK 102
KK T EE KEKK K
Sbjct: 1018 KKSKTKEEAKKEKKKSQDK 1036
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/84 (25%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 17 EGQKWDLEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFR 76
+ Q+ +LE ++ K+ EIS+ SQ+ +L+ + + KV +E+ ++ + + R
Sbjct: 885 DSQRAELEIQLEKKSEEISEYLSQITNLKEEII----NKVKVHESILEEINGLSEKIKGR 940
Query: 77 N-QLKVVKKKEFTLEEEDKEKKPD 99
+L+ + K+ L+EE + KK +
Sbjct: 941 ELELETLGKQRSELDEELRTKKEE 964
>At4g09950.1 68417.m01628 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains
Pfam PF04548: AIG1 family;
Length = 336
Score = 32.3 bits (70), Expect = 0.47
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 22 DLEHEVRKRDYEISDLNSQVNDLRGKFVKPTL----KKVSKYENKFAKLQKKAAEFNFRN 77
DL HE+R+ + I + Q+ +++G K + K++ K N+ + K+ +
Sbjct: 215 DLSHELRENEATIKEKQKQIEEMKGWSSKQEISQMKKELEKSHNEMLEGIKEKISNQLKE 274
Query: 78 QLKVVKKK--EFTLEEEDKEKK 97
L+ VK++ + E E+ EKK
Sbjct: 275 SLEDVKEQLAKAQAEREETEKK 296
>At3g23100.1 68416.m02912 double strand break repair protein,
putative (XRCC4) identical to cDNA putative double
strand break repair protein (XRCC4) GI:9800642
Length = 264
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 58 KYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKRLIEAFLE 117
K ++ Q+ + ++F + L+ K+ +T E+E + + W K KP D + I +
Sbjct: 85 KLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRW-KCKPSDDSKKITVGIL 143
Query: 118 DFLMIA 123
DFLM A
Sbjct: 144 DFLMEA 149
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 31.9 bits (69), Expect = 0.62
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 29 KRDYEISDLNSQVNDLRGKFVKPTLKKVSKY----ENKFAKLQKKAAEFNFRNQLKVVKK 84
K D + L Q K + KKV K+ +K + +KK E + + + KK
Sbjct: 144 KTDTKAQTLTVQGTIESAKLLAYIKKKVHKHAEIISSKTEEEKKKEEEDKKKKEEEDKKK 203
Query: 85 KEFTLEEEDKEKKPDWSKGKPGDQKR 110
KE ++E+++KK + +K K G++K+
Sbjct: 204 KEDEKKKEEEKKKEEENKKKEGEKKK 229
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 28 RKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKF 63
R++ + SDL +QVNDL+G+ LK++S +K+
Sbjct: 240 RRKQEQTSDLETQVNDLKGEH-SSLLKQLSNMNHKY 274
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 28 RKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKF 63
R++ + SDL +QVNDL+G+ LK++S +K+
Sbjct: 234 RRKQEQTSDLETQVNDLKGEH-SSLLKQLSNMNHKY 268
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 6 IQEYYDRMYVCEGQKWDLEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAK 65
+ E ++Y +LE+++ + ++ D +++N+L+ K +L +S+ + KF
Sbjct: 490 LSECQSKLYAATSSNTNLENQLLATEAQVEDFTAKMNELQLSLEK-SLLDLSETKEKFIN 548
Query: 66 LQKKAAEFNFRNQLKVVKKKEFTLEEEDK 94
LQ + +KKE E+E K
Sbjct: 549 LQVENDTLVAVISSMNDEKKELIEEKESK 577
>At4g09940.1 68417.m01627 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 (Arabidopsis thaliana); contains
Pfam PF04548: AIG1 family;
Length = 394
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 22 DLEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSK-YENKFAKLQKKAAEFNFRNQLK 80
DL HE+R+ + ++ +++G + + + ++ K E F Q + +L+
Sbjct: 245 DLSHEIRENETAFQIKQQEILEMKGLYTRQEMLQMKKDMEKSFENQQLRQMMERVETELR 304
Query: 81 VVKKKEFTLEEEDKEKK 97
K++ LE++ KE+K
Sbjct: 305 ETKER---LEQQLKEEK 318
>At4g03620.1 68417.m00497 myosin heavy chain-related contains weak
similarity to Swiss-Prot:P24733 myosin heavy chain,
striated muscle [Aequipecten irradians]
Length = 342
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 55 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGD 107
++S+ ++ ++++ ++F +N+ K++KK + E +KEKK D PGD
Sbjct: 193 ELSRKAHELNEMEELVSDFRAQNE-KLLKKVQNCAVEHNKEKKEDIDGPGPGD 244
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 17 EGQKWDLEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFR 76
E + L+ E+ + EI L +++ K K + + E K ++KK + + R
Sbjct: 372 EQMRRSLDEELEGKKAEIEQLQVEISHKEEKLAK----REAALEKKEEGVKKKEKDLDAR 427
Query: 77 NQLKVVKKKEFTLEEEDKE 95
LK VK+KE L+ E+K+
Sbjct: 428 --LKTVKEKEKALKAEEKK 444
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/100 (21%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 19 QKWDLEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQ 78
+K + + +K+D + NS+ ++ + K K K+ ++ + + +KK ++N ++
Sbjct: 159 EKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYKEHHD-DDDYDEKKKKKKDYNDDDE 217
Query: 79 LKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKRLIEAFLED 118
K KKK + ++++K+KK +++ D+K+ + + +D
Sbjct: 218 KK--KKKHYNDDDDEKKKKHNYN--DDDDEKKKKKEYHDD 253
>At4g26110.1 68417.m03759 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 372
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 22 DLEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEF-NFRNQLK 80
+L VRKR + D+ SQ ++L KF + +KY+ + L K E N +++
Sbjct: 46 NLTPNVRKRVDALRDIQSQHDELEAKFREERAILEAKYQTLYQPLYVKRYEIVNGTTEVE 105
Query: 81 VVKKKEFTLEEEDKEKKPDWSKGKP 105
+ + + T ++ +EK + KG P
Sbjct: 106 LAPEDD-TKVDQGEEKTAE-EKGVP 128
>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
domain-containing protein contains Pfam domains PF00226:
DnaJ domain and PF00096: Zinc finger, C2H2 type
Length = 630
Score = 29.5 bits (63), Expect = 3.3
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 3 KRIIQEYYDRMYVCEGQKWDLEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENK 62
K++ +E +R E +W HE +S+L + +D + K + SK K
Sbjct: 260 KKMEKERLERAMNYEEPEWAKAHEGEDEGAGLSELEEEDDDAKRKNEQLYCIVCSK---K 316
Query: 63 F-AKLQKKAAEFNFRNQLKVVKKKE-FT-LEEEDKEKKPDWSKGKPGDQKRLIEAFLED 118
F ++ Q K E + +++ KV + +E FT EEE++E++ D P + L E E+
Sbjct: 317 FKSEKQWKNHEQSKKHKEKVAELRESFTDYEEENEEEEIDGPLDSPESVEELHEKLQEE 375
>At4g19550.1 68417.m02875 expressed protein
Length = 212
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 53 LKKVSKYEN--KFAKLQKKAA-----EFNFRNQLKVVKKKEFTLEEEDKEKKPDWSK 102
L K+ EN K AKL K E++ +N + + K +++ EEE++ ++PDW++
Sbjct: 119 LDKLFDPENSPKRAKLDKPVVVGDQIEYSKQNSEESLLKSQYSEEEEEEAEEPDWNE 175
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 54 KKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKR 110
KK K + K +KK+ + + Q + +KK+ +++DKEK + KGKP ++K+
Sbjct: 18 KKHKKDKEKREGKEKKSKDRSKDKQKERKEKKDKHKDQKDKEKGKE--KGKPLEEKK 72
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 28.7 bits (61), Expect = 5.8
Identities = 28/103 (27%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
Query: 22 DLEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQL-- 79
+L+H++R+RD E + L S + L+ + ++ ++++ N+ ++ +EF ++QL
Sbjct: 186 ELKHKLRERDEERAALQSSLT-LKEEELEKMRQEIA---NRSKEVSMAISEFESKSQLLS 241
Query: 80 ---KVVKKKE---FTLEE--EDKEKKPDWSKG-KPGDQKRLIE 113
+VVK++E + L+ E+KE++ + SK K +Q++L E
Sbjct: 242 KANEVVKRQEGEIYALQRALEEKEEELEISKATKKLEQEKLRE 284
>At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family
protein / kinesin motor family protein kinesin,
Syncephalastrum racemosum, AJ225894
Length = 941
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 19 QKWDLEHEVRKRDYEISDLNSQV---NDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNF 75
+++D E RK + ++ L ++V N LR K++ + EN FA+ +K A
Sbjct: 449 EEFDYESLCRKLETQVDHLTAEVERQNKLRNSEKHELEKRLRECENSFAEAEKNAV---- 504
Query: 76 RNQLKVVKKKEFTLEEEDKEKKPD 99
+ K ++K+ LE KE D
Sbjct: 505 -TRSKFLEKENTRLELSMKELLKD 527
>At3g17670.1 68416.m02256 ferredoxin-related contains Pfam PF00515:
TPR Domain; similar to ferredoxin PetF2 (GI:22651984)
[Synechococcus sp. PCC 7002]
Length = 366
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 10 YDRMYVCEGQKWDLEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKK 69
Y Y+C+G + V K Y++++ S + L + P+L++ ++ + AKLQ+K
Sbjct: 309 YSEPYICQGDVY-----VAKGQYDLAE-KSYLTCLE---IDPSLRRSKPFKARIAKLQQK 359
Query: 70 AAEFN 74
E +
Sbjct: 360 VVELD 364
>At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50)
identical to DNA repair-recombination protein GI:7110148
from [Arabidopsis thaliana]
Length = 1316
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 2 LKRIIQEYYDRMYVCEGQKWDLEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYEN 61
L+ I + +R + Q +LE V+K D E+ + + DLR K K ++
Sbjct: 224 LRESIAQDQERTESSKVQMLELETSVQKVDAEVHNKEMMLKDLR-KLQDQVSIKTAERST 282
Query: 62 KFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDK 94
F + Q++ A N+ + + KE+ + E++
Sbjct: 283 LFKEQQRQYAALPEENEDTIEELKEWKSKFEER 315
>At2g28620.1 68415.m03479 kinesin motor protein-related
Length = 1076
Score = 28.7 bits (61), Expect = 5.8
Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 8/125 (6%)
Query: 1 MLKRIIQEYYDRMYVCEGQKWDLEHEVRKRDYEISDLNSQVNDLRGKFVKPTL----KKV 56
M K E Y + +G + E ++ + DL+S+ D K V + K +
Sbjct: 671 MFKGFTSEAYTLLEGLQGSLHNQEEKLSAFTQQQRDLHSRSMD-SAKSVSTVMLDFFKTL 729
Query: 57 SKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDK---EKKPDWSKGKPGDQKRLIE 113
+ NK KL + A N + KK E ++ E+K EK + +K L++
Sbjct: 730 DTHANKLTKLAEDAQNVNEQKLSAFTKKFEESIANEEKQMLEKVAELLASSNARKKELVQ 789
Query: 114 AFLED 118
++D
Sbjct: 790 IAVQD 794
>At1g68060.1 68414.m07775 expressed protein
Length = 622
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 23 LEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVV 82
LE+EVR +D E+S+ N+++ LR + K + ++ AKL K + ++
Sbjct: 75 LENEVRDKDRELSEANAEIKALR-LSERQREKACEELTDELAKLDGK-----LKLTESLL 128
Query: 83 KKKEFTLEEEDKEKK 97
+ K +++ ++EKK
Sbjct: 129 QSKNLEIKKINEEKK 143
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 28.7 bits (61), Expect = 5.8
Identities = 24/91 (26%), Positives = 40/91 (43%)
Query: 17 EGQKWDLEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFR 76
+G+K DLE E ++ E + + ++ + K K K S E K K K+ E +
Sbjct: 218 KGEKGDLEKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDES 277
Query: 77 NQLKVVKKKEFTLEEEDKEKKPDWSKGKPGD 107
+ + K K + E EK+ + K K D
Sbjct: 278 TEKEDKKLKGKKGKGEKPEKEDEGKKTKEHD 308
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 50 KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQK 109
K L++ +NK + + E + K K+KE + EDK+ K KG+ GD +
Sbjct: 166 KEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLE 225
Query: 110 R 110
+
Sbjct: 226 K 226
>At5g52550.1 68418.m06525 expressed protein
Length = 360
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 41 VNDLRGKFVKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVK--KKEFTLEEEDKEKK 97
V R K VK + + + E K +L+K A R +L+ K KKE LE D+E
Sbjct: 15 VRKARKKKVKGVVDPIKQAEKKNRRLEKAIATSAAIRAELEKKKQMKKEGQLEAADEEDS 74
Query: 98 PDWSKGK 104
D +K K
Sbjct: 75 ADAAKKK 81
>At2g19480.1 68415.m02277 nucleosome assembly protein (NAP),
putative similar to nucleosome assembly protein 1
[Glycine max] GI:1161252; contains Pfam profile PF00956:
Nucleosome assembly protein (NAP)
Length = 379
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 22 DLEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 81
+L VRKR + ++ +Q +++ KF + +KY+ + L K + N +
Sbjct: 46 NLTPPVRKRVEFLREIQNQYDEMEAKFFEERAALEAKYQKLYQPLYTK--RYEIVNGVVE 103
Query: 82 VKKKEFTLEEEDKEKKPDWSKGKP 105
V+ ++ E E K KG P
Sbjct: 104 VEGAAEEVKSEQGEDKSAEEKGVP 127
>At1g56040.1 68414.m06434 U-box domain-containing protein contains
Pfam profile PF04564: U-box domain
Length = 437
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/97 (20%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 1 MLKRIIQEYYDRMYVCEGQKWDLEHEVRKRDYEISDLNSQVNDLRGKFVKPTLKKVSKYE 60
M++++++ Y + + Q LEH++ + + + R + K ++ + E
Sbjct: 171 MMEQLLESYKEEQGKLQLQAKALEHKLEAELRHRKETETLLAIERDRIEKVKIQ-LETVE 229
Query: 61 NKFAKLQKKAAEF--NFRNQLKVVKKKEFTLEEEDKE 95
N+ + KA EF + ++ + ++ E LE+E KE
Sbjct: 230 NEIDNTRLKAEEFERKYEGEMILRRESEIALEKEKKE 266
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.135 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,178,955
Number of Sequences: 28952
Number of extensions: 171557
Number of successful extensions: 854
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 811
Number of HSP's gapped (non-prelim): 51
length of query: 332
length of database: 12,070,560
effective HSP length: 81
effective length of query: 251
effective length of database: 9,725,448
effective search space: 2441087448
effective search space used: 2441087448
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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