GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001029-TA|BGIBMGA001029-PA|undefined
         (199 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1FVF7 Cluster: Methyltransferase type 12; n=1; Stenotr...    34   2.7  
UniRef50_Q2SL99 Cluster: Outer membrane lipoprotein LolB; n=1; H...    33   4.6  
UniRef50_A7PGE3 Cluster: Chromosome chr6 scaffold_15, whole geno...    33   4.6  

>UniRef50_A1FVF7 Cluster: Methyltransferase type 12; n=1;
           Stenotrophomonas maltophilia R551-3|Rep:
           Methyltransferase type 12 - Stenotrophomonas maltophilia
           R551-3
          Length = 746

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 4/90 (4%)

Query: 37  EIQLDNILLEEEDCSNQHLQLSYWLHVSFRQML-SEADLGLVQEITATPPAGRKVPDCRA 95
           E++     LE    +NQHLQ    L    RQ+L S  D G +  + A P  G       A
Sbjct: 353 ELEQAQARLEAAQSANQHLQWQQGLREQVRQVLSSRTDEGAMPYLDA-PVGGSASVGQPA 411

Query: 96  PTVQDFFI--DRMITVDTAGWEPVFSLMHQ 123
           P+V +F    D        G E V  +MHQ
Sbjct: 412 PSVYEFNARRDLRFAQTVVGHERVCHIMHQ 441


>UniRef50_Q2SL99 Cluster: Outer membrane lipoprotein LolB; n=1;
           Hahella chejuensis KCTC 2396|Rep: Outer membrane
           lipoprotein LolB - Hahella chejuensis (strain KCTC 2396)
          Length = 206

 Score = 33.1 bits (72), Expect = 4.6
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 67  QMLSEADLGLVQEITATPPAGRKVPDCRAPTVQDFFID-RMITVDTAGWEPVFSLMHQLA 125
           Q L E  LG    I + P   R VPD R P    F +D  +I+++  GW   +S   Q+ 
Sbjct: 121 QQLLEHALGWSIPIESLPYWVRGVPDVREPNQLTFSVDGELISIEQNGWLVEYSRFKQVG 180

Query: 126 EMFNFYDYTTLGSKIAK 142
           ++ +  +  TL S+ A+
Sbjct: 181 DL-SLPEKITLTSEDAR 196


>UniRef50_A7PGE3 Cluster: Chromosome chr6 scaffold_15, whole genome
           shotgun sequence; n=5; core eudicotyledons|Rep:
           Chromosome chr6 scaffold_15, whole genome shotgun
           sequence - Vitis vinifera (Grape)
          Length = 728

 Score = 33.1 bits (72), Expect = 4.6
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 13  KNYDAM-LRTMDKSLNVCGKDGCYSEIQLDNILLEEEDCSNQHLQLSYWLHV--SFRQML 69
           K+Y A+ L+T+ K    C KD   ++I+  +  L EEDCS   ++ S    V    RQ  
Sbjct: 330 KSYTALALQTISKQFR-CLKDAISAQIKATSSSLGEEDCSGGKVEGSRLRFVDHQLRQQR 388

Query: 70  SEADLGLVQEITATPPAG 87
           +   LG++Q     P  G
Sbjct: 389 ALQQLGMIQHNAWRPQRG 406


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.320    0.133    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,421,395
Number of Sequences: 1657284
Number of extensions: 6346767
Number of successful extensions: 13012
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 13012
Number of HSP's gapped (non-prelim): 3
length of query: 199
length of database: 575,637,011
effective HSP length: 97
effective length of query: 102
effective length of database: 414,880,463
effective search space: 42317807226
effective search space used: 42317807226
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 70 (32.3 bits)