Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001028-TA|BGIBMGA001028-PA|IPR001440|Tetratricopeptide
TPR_1, IPR013026|Tetratricopeptide region
(554 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1788 - 39873900-39873986,39874009-39874137,39874180-398742... 46 6e-05
02_03_0272 - 17146578-17146691,17146806-17146926,17147260-171473... 46 8e-05
07_03_0925 + 22635504-22635668,22635768-22635947,22636036-226361... 38 0.016
01_01_1190 + 9463973-9465732,9466210-9466440,9467664-9467793,946... 35 0.15
09_01_0016 - 376742-376883,377973-378964 33 0.45
08_01_0418 - 3716226-3716279,3716531-3716581,3716656-3716751,371... 33 0.45
08_02_1577 + 27985066-27985434,27985520-27985594,27986159-279863... 33 0.59
08_02_1146 + 24678142-24678258,24678550-24678587,24678997-246790... 33 0.59
02_05_1269 + 35352825-35352888,35353645-35353968,35355062-353551... 32 1.0
08_01_0779 - 7553278-7553631,7553765-7553977,7554132-7554617,755... 31 3.2
02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166... 30 4.2
07_01_0748 - 5735420-5735593,5735735-5735953,5736353-5736532,573... 29 7.3
06_03_0791 - 24641350-24641418,24641684-24641965,24642318-246425... 29 7.3
03_02_0310 + 7315185-7316820,7318332-7318879 29 7.3
12_01_0611 - 5034481-5034709,5034863-5035020,5035231-5035475,503... 29 9.6
05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891,278... 29 9.6
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 29 9.6
04_03_0433 + 15878709-15878798,15879271-15879336,15880608-158807... 29 9.6
>01_06_1788 -
39873900-39873986,39874009-39874137,39874180-39874246,
39874874-39874909,39875146-39875292,39875772-39875899,
39876349-39876435,39876523-39876633,39877433-39877600,
39877665-39877749,39877826-39877942,39878051-39878127,
39879981-39880077,39880175-39880377,39880519-39880645,
39880687-39880754,39880855-39880908,39880990-39881108,
39881651-39881729,39881803-39881865,39882113-39882232,
39882718-39882774,39882872-39882988,39883122-39883172,
39883262-39883360,39883438-39883583,39883740-39883887
Length = 928
Score = 46.4 bits (105), Expect = 6e-05
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 25 NMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRAAT 84
N+A+ Y R KGN +A EC +A+ P A ++G +L +A A
Sbjct: 159 NLANAYTR-KGNLSQAAECCHQALALNPHLAD--AYCNLGDVLKAQGLYREAYSHYLDAL 215
Query: 85 DHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTF 124
+ PTF ++A +GDFN + ++ E +K NP F
Sbjct: 216 NIKPTFANAWNNIAGLLMQWGDFNKAALYYKEAIKCNPAF 255
Score = 34.3 bits (75), Expect = 0.26
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Query: 23 HYNMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALL-SMGTILHRSKRTEDAIVVLR 81
H N+ +LY +V G A+ C + A P ++G H + + AI+ R
Sbjct: 259 HLNLGNLY-KVTGMRQDAIVCFQNAARAKPENAVAYVFSGNLGNAYHEQGQLDLAILSYR 317
Query: 82 AATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTFELAV 128
A + ++ + +L NA G ++ + CL L P+ A+
Sbjct: 318 QAIHCNSSYVEAYNNLGNALKDAGRNEEAISCYQTCLALQPSHPQAL 364
Score = 32.3 bits (70), Expect = 1.0
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 35 GNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRAATDHDPTFTYNH 94
G+ A+E PR +++ LL G + ++ + + I A P
Sbjct: 66 GDYKAALEHCNAVYRANPRLLENLLLL--GAVYYQLREFDMCIAKNEEAVAIQPNCPECF 123
Query: 95 FSLANAYAVFGDFNSSLKHFAECLKLNPTF 124
S+ANA+ GD +++++ + ++L PTF
Sbjct: 124 NSIANAWREKGDVDNAIQFYVHAVQLRPTF 153
Score = 31.1 bits (67), Expect = 2.4
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Query: 24 YNMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRAA 83
+N + WR KG+ A++ AV P + D A ++ R A A
Sbjct: 123 FNSIANAWREKGDVDNAIQFYVHAVQLRP-TFAD-AWTNLANAYTRKGNLSQAAECCHQA 180
Query: 84 TDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTF 124
+P + +L + G + + H+ + L + PTF
Sbjct: 181 LALNPHLADAYCNLGDVLKAQGLYREAYSHYLDALNIKPTF 221
>02_03_0272 -
17146578-17146691,17146806-17146926,17147260-17147365,
17147469-17147551,17147688-17147815,17147897-17147983,
17148064-17148174,17148502-17148669,17148753-17148837,
17148921-17149037,17149127-17149203,17149299-17149370,
17150538-17150634,17150750-17150952,17151115-17151217,
17151324-17151391,17151461-17151514,17151595-17151704,
17151982-17152060,17152171-17152233,17153410-17153529,
17153913-17153969,17154071-17154187,17156426-17156476,
17156591-17156689,17156787-17156935,17158090-17158312
Length = 953
Score = 46.0 bits (104), Expect = 8e-05
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 8 HWLAAMLRRNNSSWLHYNMASLY-WRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTI 66
++L A+ R N N+AS Y W KG +A +C R+A+ PR A ++G +
Sbjct: 168 YYLTAIQLRPNFCDAWSNLASAYTW--KGRLNEAAQCCRQALAINPRLVD--AHSNLGNL 223
Query: 67 LHRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTF 124
+ ++A A DP F +LA + GD + +L ++ E +KL P+F
Sbjct: 224 MKAQGFIQEAYNCYIEALRIDPQFAIAWSNLAGLFMEAGDLDKALLYYKEAVKLKPSF 281
Score = 39.1 bits (87), Expect = 0.009
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 25 NMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRAAT 84
N+A +Y + +GN A+ C + P AL++ G R +AI A
Sbjct: 423 NLAVIY-KQQGNYADAITCYTEVLRVDPTAAD--ALVNRGNTFKEIGRVNEAIQDYIQAA 479
Query: 85 DHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTFELA---VRHKIAVLC 136
PT H +LA+AY G +++ + + L+L P F A + H + +C
Sbjct: 480 TIRPTMAEAHANLASAYKDSGHVETAIVSYKQALRLRPDFPEATCNLLHTLQCVC 534
Score = 37.5 bits (83), Expect = 0.028
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 23 HYNMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRA 82
H +A +R G +A+E PR+ ++ LL G I ++ + + I
Sbjct: 81 HLALAHQNYR-SGKYKEALEHGNIVYEKNPRRTDNLLLL--GAIYYQIRNYDMCIAKNEE 137
Query: 83 ATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTF 124
A DP F + ++ANA+ GD + +++++ ++L P F
Sbjct: 138 ALAIDPNFAECYGNMANAWKEKGDVDLAIRYYLTAIQLRPNF 179
>07_03_0925 +
22635504-22635668,22635768-22635947,22636036-22636125,
22636271-22636366,22636485-22636592,22636635-22636744,
22637956-22638058,22638244-22638297,22638542-22638697,
22638915-22639037,22639263-22639312,22639414-22639537
Length = 452
Score = 38.3 bits (85), Expect = 0.016
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 232 LKEKG----VLAIESAGNLQKLVKHIRQNSPKEATLKIRPEKLKVAEVEVLKEIGPTP 285
LKEKG +E G LQ L+K+I++N P ++ + VAE+E+L+E TP
Sbjct: 162 LKEKGSKLYTSLLEEKGGLQTLLKYIKENDPDRLSVALASSLDTVAELELLQEDDYTP 219
>01_01_1190 +
9463973-9465732,9466210-9466440,9467664-9467793,
9468723-9468888,9469528-9469859,9470284-9470513,
9471535-9471613,9471689-9471865
Length = 1034
Score = 35.1 bits (77), Expect = 0.15
Identities = 29/103 (28%), Positives = 39/103 (37%), Gaps = 12/103 (11%)
Query: 31 WRVKGNAP-------KAMECSRRAVHYAP---RKYKDIALLSMGTILHRSK--RTEDAIV 78
WR++GN KA EC ++ +K + L R R +A+
Sbjct: 584 WRIRGNQAYAEGQLAKAEECYTHGINSVSLNEASWKSLMLCYSNRAATRMSLGRMREALS 643
Query: 79 VLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLN 121
R ATD D +F AN GD + K F CLK N
Sbjct: 644 DCRKATDIDSSFLKAQIRAANCLLALGDVEEAQKGFEICLKSN 686
>09_01_0016 - 376742-376883,377973-378964
Length = 377
Score = 33.5 bits (73), Expect = 0.45
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Query: 316 PGQNKKE---SETSPFETGVMM--YPPTIKINRNHQDFDVDADWPSTDFCKENSPNFPEN 370
P QN KE S + P + +++ PP ++ N+NHQD D ++D S D + P P N
Sbjct: 70 PQQNGKEVSDSPSLPTNSAIVLSPLPPPLQANKNHQDQDSESDSDSDD----DEPPLPTN 125
>08_01_0418 -
3716226-3716279,3716531-3716581,3716656-3716751,
3717037-3717194,3717303-3717417,3717511-3717564,
3717843-3717950,3718494-3718583,3718818-3718856,
3718993-3719172,3719264-3719576,3719659-3719834
Length = 477
Score = 33.5 bits (73), Expect = 0.45
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 144 IEELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCKKMTNITGL 203
+++++ + L+Q+L+EY +++ L++ A + K E + + + I
Sbjct: 182 VQQIEAEVNSLKQKLVEYNKKQLA-LRANATAINDKKEETHRKFYIVLVRNVRSVQIAKN 240
Query: 204 KIKELKLQGDRNSLLQYFLDSPMYNDQWLKEKGVLAIESAGNLQKLVKHIRQNSPKEATL 263
+ +KL + + LL ++SP + L+EK E N +K+ Q K ATL
Sbjct: 241 DFELVKLAQENSKLLPKIVESPEKLQRALEEKKTARAE-LKNAEKIATQSVQE--KTATL 297
Query: 264 KI 265
+I
Sbjct: 298 EI 299
>08_02_1577 +
27985066-27985434,27985520-27985594,27986159-27986320,
27986415-27986590,27986681-27986756,27987154-27987282,
27987363-27987482,27987734-27987815,27988016-27988110,
27988427-27988491,27988604-27988802,27989426-27989620,
27989866-27989960,27990059-27990194,27990265-27990482,
27990729-27990856,27991148-27991617
Length = 929
Score = 33.1 bits (72), Expect = 0.59
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 49 HYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFN 108
HYAP Y ++G + + + A+ A P + + ++ Y G+
Sbjct: 200 HYAPAYY------NLGVVYSEMMQFDLALTCYEKAALERPLYAEAYCNMGVIYKNRGELE 253
Query: 109 SSLKHFAECLKLNPTFELAVRHKIAVLCHLYVSDTIE 145
+++ + CL ++P FE+A + L L IE
Sbjct: 254 AAIACYERCLTISPNFEIAKNNMAIALTDLGTKVKIE 290
>08_02_1146 +
24678142-24678258,24678550-24678587,24678997-24679012,
24679874-24680002,24680073-24680229,24680337-24680530,
24680668-24680916,24681196-24681309,24681949-24681990,
24682402-24682572,24682932-24683104,24683378-24683624,
24684046-24684130,24684401-24684510,24684714-24684977,
24685885-24685950,24686431-24686525,24686780-24686858
Length = 781
Score = 33.1 bits (72), Expect = 0.59
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Query: 22 LHYNMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLR 81
+H + LY + KA+ + A+ P+ Y +G S ++ DAI+ +
Sbjct: 645 VHIVLGVLY-NLSREYDKAIAAFKTALQLKPQDYS--LWNKLGATQANSIQSADAILAYQ 701
Query: 82 AATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNP 122
A D P + ++ +YA G + S++++ + +NP
Sbjct: 702 QALDLKPNYVRAWANMGISYANQGLYEDSIRYYVRAVAMNP 742
>02_05_1269 +
35352825-35352888,35353645-35353968,35355062-35355183,
35355361-35355482,35355651-35355755,35356402-35356765,
35357181-35357321,35357619-35359109
Length = 910
Score = 32.3 bits (70), Expect = 1.0
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 417 KDITLFTQKKVKPQFSSEVAGVG-PLRRKLHEYVADGDLAAAQRMQDAEIGQRIYAAMQK 475
K + K +PQ AG G + E A+ + Q +++ + +Y A+ K
Sbjct: 30 KGSVILCTTKNQPQHMEAAAGAGGAIGGSGREAAAEEEDGGEQWLEEEAEAEAVYCAVGK 89
Query: 476 KLAPKW---ILYTLSSLYWRVRSNNINALH 502
+ +W +++ L++ WR R + I +H
Sbjct: 90 EAVKEWKANLMWVLAAFPWRRRRSRIVLIH 119
>08_01_0779 -
7553278-7553631,7553765-7553977,7554132-7554617,
7554729-7554796,7554918-7555215,7555288-7555364,
7555703-7555874,7555951-7556021,7557371-7557392
Length = 586
Score = 30.7 bits (66), Expect = 3.2
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 310 KNNERKPGQNKKESETSPFETGVMMYPPTIKINRNHQ-DFDVDADWPSTDFCKENSPNFP 368
+NN+ KP N ++++ E G+ M + I +NH+ + ++ D+ DF ++
Sbjct: 454 ENNDNKPVTNSRDTQEVKLEHGLQM----LTIFKNHESETNILEDF---DFYEQREKALQ 506
Query: 369 ENLEAIYPTF----MPFENKGI-RLMALLTDMIG 397
EN P P ENK + LMA ++D G
Sbjct: 507 ENRRQQQPASPELQKPAENKALGELMAHISDTFG 540
>02_05_0110 +
25914110-25915006,25915726-25915797,25916411-25916699,
25916864-25916949,25917267-25917490,25917674-25917740,
25917830-25917889,25917995-25918078,25918475-25918555
Length = 619
Score = 30.3 bits (65), Expect = 4.2
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 64 GTILHRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPT 123
G L + ++ DA+ A +P + + A Y G LK +C++L+PT
Sbjct: 420 GNQLFKEQKYPDAVKHYTEAIRRNPKDPKVYSNRAACYTKLGAMPEGLKDAEKCIELDPT 479
Query: 124 FELAVRHKIAV 134
F K A+
Sbjct: 480 FSKGYTRKGAI 490
>07_01_0748 -
5735420-5735593,5735735-5735953,5736353-5736532,
5736602-5736739,5736852-5737052,5737859-5737986,
5738114-5738189,5738354-5738503,5738594-5739115,
5739208-5739357,5739559-5739807,5740249-5740440,
5740890-5740937,5741589-5741717,5741821-5741935,
5742044-5742159,5742341-5742415,5742562-5742696
Length = 998
Score = 29.5 bits (63), Expect = 7.3
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 356 STDFCKENSP-NFPENLEAI---YPTFMPFENKGIRLMALLTDMIGVPASVEHELPWHPP 411
S+ + + SP N P N EAI Y + F + LT V S+ P
Sbjct: 594 SSIWAQATSPENTPANYEAIAHTYSLLLLFSGAKASVFEALTQSFQVAFSLRGYSLTEPD 653
Query: 412 TCPPDKDITLFTQKKVKPQFSSEVAGVGPL 441
+ PP + +LFT FSS V PL
Sbjct: 654 SLPPCRRRSLFTLATAMIIFSSRTFNVLPL 683
>06_03_0791 -
24641350-24641418,24641684-24641965,24642318-24642537,
24642657-24642776,24643056-24643132,24643220-24643339,
24644121-24644186,24644265-24644479,24645450-24645582,
24646562-24646708,24647301-24647596,24648222-24648319,
24648425-24648471,24649340-24649449,24649663-24649735,
24650795-24650899
Length = 725
Score = 29.5 bits (63), Expect = 7.3
Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Query: 71 KRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTFELAVRH 130
+ E+A+ + P+ H+ L Y G ++ + F + L L+P A
Sbjct: 81 REAEEALCPVNEPNIEVPSGATGHYLLGVIYRYTGRVEAAAEQFVQALTLDPLLWAAYEE 140
Query: 131 KIAVLCHLYVSDTIEEL--KETLQKLRQELIEYARRESEWLKSQAAFL 176
LC L V++ E + T +L+QEL + E ++ FL
Sbjct: 141 ----LCILGVAEDANECFSEATALRLQQELTSTSNVEKSNFVNENRFL 184
>03_02_0310 + 7315185-7316820,7318332-7318879
Length = 727
Score = 29.5 bits (63), Expect = 7.3
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 110 SLKHFAECLKLNPTFELAVRHKIAVLCHLYVSDTIEELKETLQKLRQELIEYARRESEWL 169
+LK + L + P F A + + L +TI + KE KL Q+L + AR+E +
Sbjct: 600 ALKPSPKPLSIEPHFSTASKEDDSSL------ETIVKCKEAEAKLFQKLADDARKEVDSY 653
Query: 170 KSQAAFLRTMKHEEEFDYRNIDNNCKKMTNITGLKIKELKL 210
+ Q RT K EEE+ + ++ K++ELK+
Sbjct: 654 R-QIVRSRTQKLEEEYAAKLAKVCFQETEEKRRKKLEELKM 693
>12_01_0611 -
5034481-5034709,5034863-5035020,5035231-5035475,
5036686-5036983,5037644-5038482,5039763-5039823
Length = 609
Score = 29.1 bits (62), Expect = 9.6
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 145 EELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCKKMTNITGLK 204
+ L QKLR+ + E ++ + + + MK++EEF + I+ K T +K
Sbjct: 448 DTLSVVTQKLRETMEENTIVRNKAKEKHLEYEKEMKYQEEFFHDQIE-KIHKATEEKEIK 506
Query: 205 IKELKLQGDRNSLLQYFLDSPMYNDQ 230
++L LQ +R Q +DS D+
Sbjct: 507 FEKL-LQEERAKARQSDVDSGSTEDR 531
>05_01_0356 +
2785410-2785670,2785843-2785960,2786800-2786891,
2787114-2787176,2787299-2787397,2787726-2787884,
2788420-2788491,2788567-2788699,2788813-2788877,
2789016-2789091,2789236-2789337,2789524-2789716,
2790576-2790654,2792939-2793007,2793261-2793311,
2793680-2793742,2793926-2794041,2794263-2794347,
2794898-2794957,2795594-2795639,2796011-2796084,
2796350-2796400,2796474-2796674,2796747-2796791,
2797063-2797156,2797226-2797371,2797510-2797739,
2798136-2798196,2798290-2798347,2799020-2799513
Length = 1151
Score = 29.1 bits (62), Expect = 9.6
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 59 ALLSMGTILHRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECL 118
A L++ + R +DA+++L T H LA +A + +L H+ L
Sbjct: 889 AALALADLHVAEGRNKDAVLLLERYL-RQWTDDSLHIKLAQVFAATNMLSDALSHYQSAL 947
Query: 119 KLNPTFELA 127
++NP E A
Sbjct: 948 RINPHNEAA 956
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 29.1 bits (62), Expect = 9.6
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 8/130 (6%)
Query: 146 ELKETLQKLRQEL-IEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCKKMTNITGLK 204
E ++ + EL + A +S+ AA T++ E+ Y D K +T +
Sbjct: 174 EAEQASASMEDELRTKLASMQSQQEADMAALRSTVEQLEQARYELADAIDAKNAALT--Q 231
Query: 205 IKELKLQGDRNSLLQYFLDSPMYNDQWLKEKGVLAIESAGNLQKLVKHIRQNSPKEATLK 264
+ D N+ LD+ + + KG+L E + + V+HIR+ + + LK
Sbjct: 232 ADDAMRASDENAEKIKLLDAEVAH-----LKGLLDSEVGSSSKGAVEHIRKLEEENSGLK 286
Query: 265 IRPEKLKVAE 274
+ EK VAE
Sbjct: 287 LELEKANVAE 296
>04_03_0433 +
15878709-15878798,15879271-15879336,15880608-15880743,
15880813-15880900,15881674-15881826,15882214-15882376,
15882446-15882630,15882696-15882869,15883222-15883367,
15883498-15883621,15883702-15883882,15884986-15885145,
15885235-15885276,15885349-15885467,15885548-15885746,
15886263-15886394,15887546-15887649,15887750-15887929,
15888202-15888249
Length = 829
Score = 29.1 bits (62), Expect = 9.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 41 MECSRRAVHYAPRKYKDIALLSMGTILHRSKRTE 74
M + ++ P + KD ALL++GT+ R K+TE
Sbjct: 441 MRYNEASIEVKPYRQKDGALLAIGTLCDRLKQTE 474
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.134 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,098,029
Number of Sequences: 37544
Number of extensions: 679541
Number of successful extensions: 1975
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1948
Number of HSP's gapped (non-prelim): 35
length of query: 554
length of database: 14,793,348
effective HSP length: 86
effective length of query: 468
effective length of database: 11,564,564
effective search space: 5412215952
effective search space used: 5412215952
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -