Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001028-TA|BGIBMGA001028-PA|IPR001440|Tetratricopeptide
TPR_1, IPR013026|Tetratricopeptide region
(554 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g04240.1 68416.m00448 O-linked N-acetyl glucosamine transfera... 48 2e-05
At2g20000.1 68415.m02338 cell division cycle family protein / CD... 40 0.004
At3g11540.1 68416.m01407 gibberellin signal transduction protein... 39 0.010
At1g63020.1 68414.m07117 DNA-directed RNA polymerase alpha subun... 38 0.013
At2g41520.2 68415.m05131 DNAJ heat shock N-terminal domain-conta... 37 0.030
At2g41520.1 68415.m05130 DNAJ heat shock N-terminal domain-conta... 37 0.030
At5g63200.1 68418.m07935 tetratricopeptide repeat (TPR)-containi... 35 0.12
At5g10090.1 68418.m01169 tetratricopeptide repeat (TPR)-containi... 35 0.12
At1g62740.1 68414.m07081 stress-inducible protein, putative simi... 34 0.21
At1g56080.1 68414.m06439 expressed protein 34 0.21
At3g48150.1 68416.m05251 cell division cycle family protein / CD... 33 0.49
At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containi... 33 0.49
At1g12270.1 68414.m01419 stress-inducible protein, putative simi... 33 0.49
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 32 0.86
At4g12400.1 68417.m01960 stress-inducible protein, putative simi... 32 1.1
At2g38440.1 68415.m04721 expressed protein 32 1.1
At2g32450.1 68415.m03964 calcium-binding EF hand family protein ... 32 1.1
At1g61720.1 68414.m06961 dihydroflavonol 4-reductase (dihydrokae... 32 1.1
At4g39180.1 68417.m05548 SEC14 cytosolic factor, putative / phos... 31 1.5
At3g62940.2 68416.m07071 OTU-like cysteine protease family prote... 31 1.5
At3g62940.1 68416.m07070 OTU-like cysteine protease family prote... 31 1.5
At5g56290.1 68418.m07026 peroxisomal targeting signal type 1 rec... 31 2.0
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 31 2.0
At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containi... 31 2.0
At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containi... 31 2.6
At5g41150.1 68418.m05002 repair endonuclease (RAD1) (UVH1) conta... 31 2.6
At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing ... 31 2.6
At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing ... 31 2.6
At2g31760.1 68415.m03878 zinc finger protein-related contains lo... 31 2.6
At4g14560.1 68417.m02242 auxin-responsive protein / indoleacetic... 30 3.5
At3g18420.1 68416.m02342 tetratricopeptide repeat (TPR)-containi... 30 3.5
At1g29640.1 68414.m03623 expressed protein contains Pfam profile... 30 3.5
At5g55740.1 68418.m06948 pentatricopeptide (PPR) repeat-containi... 30 4.6
At5g47820.2 68418.m05908 kinesin-like protein (FRA1) identical t... 30 4.6
At5g47820.1 68418.m05907 kinesin-like protein (FRA1) identical t... 30 4.6
At2g06210.2 68415.m00683 phosphoprotein-related low similarity t... 30 4.6
At2g06210.1 68415.m00684 phosphoprotein-related low similarity t... 30 4.6
At1g05150.1 68414.m00518 calcium-binding EF hand family protein ... 30 4.6
At4g39820.1 68417.m05641 expressed protein 29 6.1
At4g32190.1 68417.m04581 centromeric protein-related low similar... 29 6.1
At3g28190.1 68416.m03522 hypothetical protein 29 6.1
At3g16320.1 68416.m02061 cell division cycle family protein / CD... 29 6.1
At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containi... 29 6.1
At3g13460.2 68416.m01694 expressed protein contains Pfam profile... 29 6.1
At3g13460.1 68416.m01693 expressed protein contains Pfam profile... 29 6.1
At3g11680.1 68416.m01432 expressed protein contains Pfam profile... 29 6.1
At2g39090.1 68415.m04803 tetratricopeptide repeat (TPR)-containi... 29 6.1
At2g17980.1 68415.m02090 sec1 family protein similar to SWISS-PR... 29 6.1
At1g68600.1 68414.m07839 expressed protein contains Pfam profile... 29 6.1
At1g61010.2 68414.m06870 cleavage and polyadenylation specificit... 29 6.1
At1g61010.1 68414.m06869 cleavage and polyadenylation specificit... 29 6.1
At1g49960.2 68414.m05605 xanthine/uracil permease family protein... 29 6.1
At1g49960.1 68414.m05606 xanthine/uracil permease family protein... 29 6.1
At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family pr... 29 8.0
At3g21560.1 68416.m02719 UDP-glucosyltransferase, putative simil... 29 8.0
At2g47620.1 68415.m05941 SWIRM domain-containing protein / DNA-b... 29 8.0
At1g65080.1 68414.m07378 OXA1 family protein contains Pfam PF020... 29 8.0
>At3g04240.1 68416.m00448 O-linked N-acetyl glucosamine transferase,
putative similar to O-GlcNAc transferase, Homo sapiens
[SP|O15294], Rattus norvegicus [SP|P56558]; contains
Pfam profile PF00515: TPR Domain; identical to cDNA
GI:18139886
Length = 977
Score = 48.0 bits (109), Expect = 2e-05
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 8 HWLAAMLRRNNSSWLHYNMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTIL 67
++L A+ R N + N+AS Y R KG +A +C ++A+ P A ++G ++
Sbjct: 143 YYLIAIELRPNFADAWSNLASAYMR-KGRLSEATQCCQQALSLNPLLVD--AHSNLGNLM 199
Query: 68 HRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTF 124
+A A PTF +LA + GD N +L+++ E +KL P F
Sbjct: 200 KAQGLIHEAYSCYLEAVRIQPTFAIAWSNLAGLFMESGDLNRALQYYKEAVKLKPAF 256
Score = 39.9 bits (89), Expect = 0.004
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 24 YNMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRAA 83
+N ++ ++ +GN A+ C + P AL++ G R +AI A
Sbjct: 396 FNNLAIIYKQQGNYSDAISCYNEVLRIDPLAAD--ALVNRGNTYKEIGRVTEAIQDYMHA 453
Query: 84 TDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTFELA---VRHKIAVLC 136
+ PT H +LA+AY G +++ + + L L P F A + H + +C
Sbjct: 454 INFRPTMAEAHANLASAYKDSGHVEAAITSYKQALLLRPDFPEATCNLLHTLQCVC 509
Score = 37.1 bits (82), Expect = 0.030
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 23 HYNMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRA 82
+ N+ ++Y + G +A+ C + A+ P +A ++ +I + + + AI +
Sbjct: 260 YLNLGNVY-KALGRPTEAIMCYQHALQMRPNSA--MAFGNIASIYYEQGQLDLAIRHYKQ 316
Query: 83 ATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTFELAV 128
A DP F + +L NA G + +++ + +CL L P A+
Sbjct: 317 ALSRDPRFLEAYNNLGNALKDIGRVDEAVRCYNQCLALQPNHPQAM 362
Score = 36.3 bits (80), Expect = 0.053
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 25 NMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRAAT 84
N+A L+ G+ +A++ + AV P + D A L++G + R +AI+ + A
Sbjct: 228 NLAGLFME-SGDLNRALQYYKEAVKLKPA-FPD-AYLNLGNVYKALGRPTEAIMCYQHAL 284
Query: 85 DHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTF 124
P ++A+ Y G + +++H+ + L +P F
Sbjct: 285 QMRPNSAMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRF 324
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 35 GNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRAATDHDPTFTYNH 94
G+ +A+E S P + ++ L+ G I ++ + + I A P F +
Sbjct: 67 GDFKQALEHSNMVYQRNPLRTDNLLLI--GAIYYQLQEYDMCIARNEEALRIQPQFAECY 124
Query: 95 FSLANAYAVFGDFNSSLKHFAECLKLNPTF 124
++ANA+ GD + +++++ ++L P F
Sbjct: 125 GNMANAWKEKGDTDRAIRYYLIAIELRPNF 154
>At2g20000.1 68415.m02338 cell division cycle family protein / CDC
family protein low similarity to SP|P30260|CC27_HUMAN
Protein CDC27Hs (Cell division cycle protein 27 homolog)
Homo sapiens; contains Pfam profile PF00515: TPR Domain
Length = 744
Score = 39.9 bits (89), Expect = 0.004
Identities = 51/255 (20%), Positives = 108/255 (42%), Gaps = 21/255 (8%)
Query: 18 NSSWLHYNMASLYWRVKG--NAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTED 75
N+ W+ + Y+ + A KA +R A Y + DI T+L+ K
Sbjct: 448 NTGWVLSQVGKAYFELIDYLEAEKAFRLARLASPYC-LEGMDI----YSTVLYHLKEDMK 502
Query: 76 AIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTFELAVRHKIAVL 135
+ + D + ++ N Y++ D ++LK+F ++LNP F A H L
Sbjct: 503 LSYLAQELISTDRLAPQSWCAMGNCYSLQKDHETALKNFLRAVQLNPRF--AYAH---TL 557
Query: 136 C-HLYVSDTIEELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHE-EEFDYRN---I 190
C H Y T+E+ + ++ + L R + W +LR K E E +R I
Sbjct: 558 CGHEYT--TLEDFENGMKSYQNALRVDTRHYNAWYGLGMIYLRQEKLEFSEHHFRMAFLI 615
Query: 191 DNNCKKMTNITGLKIKELKLQGDRNSLLQYFLDSPMYNDQWLKEKG--VLAIESAGNLQK 248
+ + + + G + LK + +++ + + N + +K ++ +E +
Sbjct: 616 NPSSSVIMSYLGTSLHALKRSEEALEIMEQAIVADRKNPLPMYQKANILVCLERLDEALE 675
Query: 249 LVKHIRQNSPKEATL 263
+++ +++ +P E+++
Sbjct: 676 VLEELKEYAPSESSV 690
>At3g11540.1 68416.m01407 gibberellin signal transduction protein
(SPINDLY) identical to spindly GB:AAC49446 (GI:1589778)
[Arabidopsis thaliana]; contains Pfam profile PF00515
TPR Domain
Length = 914
Score = 38.7 bits (86), Expect = 0.010
Identities = 27/122 (22%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 25 NMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRAAT 84
N+ LY + + N KA+EC + A+ P + +L ++G + + + A ++ A
Sbjct: 334 NLGVLY-KDRDNLDKAVECYQMALSIKPNFAQ--SLNNLGVVYTVQGKMDAAASMIEKAI 390
Query: 85 DHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTFELAVRHKIAVLCHLYVSDTI 144
+PT+ +L Y G+ ++ + ECLK++P A ++++ L Y+++ +
Sbjct: 391 LANPTYAEAFNNLGVLYRDAGNITMAIDAYEECLKIDPDSRNAGQNRL--LAMNYINEGL 448
Query: 145 EE 146
++
Sbjct: 449 DD 450
Score = 33.9 bits (74), Expect = 0.28
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Query: 49 HYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFN 108
HYAP Y ++G + + ++A+ A P + + ++ Y GD
Sbjct: 184 HYAPAYY------NLGVVYSEMMQYDNALSCYEKAALERPMYAEAYCNMGVIYKNRGDLE 237
Query: 109 SSLKHFAECLKLNPTFELAVRHKIAVLCHL 138
++ + CL ++P FE+A + L L
Sbjct: 238 MAITCYERCLAVSPNFEIAKNNMAIALTDL 267
>At1g63020.1 68414.m07117 DNA-directed RNA polymerase alpha subunit
family protein low similarity to RNA polymerase IIA
largest subunit [Trypanosoma brucei] GI:162215; contains
InterPro accession IPR000722: RNA polymerase, alpha
subunit
Length = 1453
Score = 38.3 bits (85), Expect = 0.013
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 135 LCHLYVSDTIEELKE-TLQKLRQELIEYARRESEWLKSQAAFL--RTMKHEEEFDYRNID 191
+CH ++S+ + + K+ + + + L E + + LK L + H D D
Sbjct: 981 VCHFHISEKVLKRKQLSAESVVSSLNEQYKSRNRELKLDIVDLDIQNTNHCSSDDQAMKD 1040
Query: 192 NN-CKKMTNITGLKIKELKLQGDRNSLLQYFLDSPMYNDQWLKEKGVL 238
+N C +T + K L+L R L+ + LDSP+ DQ +K+ +L
Sbjct: 1041 DNVCITVTVVEASKHSVLELDAIRLVLIPFLLDSPVKGDQGIKKVNIL 1088
>At2g41520.2 68415.m05131 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1077
Score = 37.1 bits (82), Expect = 0.030
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 31 WRVKGNAP-------KAMECSRRAVHYAPRK------YKDIALLSMGTILHRSK--RTED 75
WR++GN KA EC ++ +P K K +AL R R +
Sbjct: 556 WRLRGNQAYKNGYMSKAEECYTHGINSSPSKDNSEYSVKPLALCYGNRAAARISLGRLRE 615
Query: 76 AIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLK 119
AI A DP++ + AN + V G+ S++++F +C+K
Sbjct: 616 AISDCEMAASLDPSYIKAYMRAANCHLVLGELGSAVQYFNKCMK 659
>At2g41520.1 68415.m05130 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1108
Score = 37.1 bits (82), Expect = 0.030
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 31 WRVKGNAP-------KAMECSRRAVHYAPRK------YKDIALLSMGTILHRSK--RTED 75
WR++GN KA EC ++ +P K K +AL R R +
Sbjct: 556 WRLRGNQAYKNGYMSKAEECYTHGINSSPSKDNSEYSVKPLALCYGNRAAARISLGRLRE 615
Query: 76 AIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLK 119
AI A DP++ + AN + V G+ S++++F +C+K
Sbjct: 616 AISDCEMAASLDPSYIKAYMRAANCHLVLGELGSAVQYFNKCMK 659
>At5g63200.1 68418.m07935 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|P28290 Sperm-specific
antigen 2 (Cleavage signal-1 protein) (CS-1) Homo
sapiens; contains Pfam profile PF00515: TPR Domain
Length = 649
Score = 35.1 bits (77), Expect = 0.12
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 80 LRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTFELAVRHKIAV 134
L AA DP + +LAN+Y + GD SS K + KL+P +A R +AV
Sbjct: 343 LLAALRSDPKSAHAWVNLANSYYMMGDHRSSSKCLEKAAKLDPNC-MATRFAVAV 396
>At5g10090.1 68418.m01169 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 594
Score = 35.1 bits (77), Expect = 0.12
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 18/161 (11%)
Query: 35 GNAPKAMECSRRAVHYAPRKY-----KDIALLSMGTILHRSKRTEDAIVVLRAATDHDPT 89
GN +A+ A+ P+K K AL ++G IL +A+ R A DP
Sbjct: 251 GNFAEALALYEAAISIDPKKASYRSNKSAALTALGRIL-------EAVFECREAIRIDPH 303
Query: 90 FTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTFELAVRHKIAVLCHLYVSDTIEELKE 149
+ H LAN Y G+ +S+ HF +++ + K+ V HL + L++
Sbjct: 304 YHRAHHRLANLYLRLGEVENSIYHFKHAGPEADQEDIS-KAKM-VQTHLNKCTEAKRLRD 361
Query: 150 --TLQKLRQELIEY-ARRESEWLKSQA-AFLRTMKHEEEFD 186
TL K + I A + QA AFL+T +H+E D
Sbjct: 362 WNTLIKETENTITTGADAAPQVYALQAEAFLKTYRHQEADD 402
>At1g62740.1 68414.m07081 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 571
Score = 34.3 bits (75), Expect = 0.21
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 99 NAYAVFGDFNSSLKHFAECLKLNPTFELAVRHKIAVLCHL-YVSDTIEELKETLQ 152
NA GDFNS++ HF + + L PT + ++ A L + + + + K+T++
Sbjct: 10 NAAFSSGDFNSAVNHFTDAINLTPTNHVLFSNRSAAHASLNHYDEALSDAKKTVE 64
>At1g56080.1 68414.m06439 expressed protein
Length = 310
Score = 34.3 bits (75), Expect = 0.21
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 105 GDFNSSLKHFAECLKLNPTFELAVRHKIAVLCHLYVSDTIEELKETLQKLRQELIEYARR 164
GDFN S + A + +P +L + KI + ++ + L+ + LRQ+L+E R
Sbjct: 6 GDFNLSDEILA-VIPTDPYDQLDLARKITSMA---IASRVSNLESQVSGLRQKLLEKDRL 61
Query: 165 ESEWLKSQAAFLRTMKHEEEFDYRN-IDNNCKKMTNITGLKIKELKLQGD 213
E L+ + + + HE + +N +D N K L I KL D
Sbjct: 62 VHE-LEDRVSSFERLYHEADSSLKNVVDENMKLTQERDSLAITAKKLGRD 110
>At3g48150.1 68416.m05251 cell division cycle family protein / CDC
family protein similar to cell division cycle protein 23
[Homo sapiens] GI:3283051, anaphase-promoting complex
subunit 8 [Homo sapiens] GI:6180017; contains Pfam
profile PF00515: TPR Domain
Length = 579
Score = 33.1 bits (72), Expect = 0.49
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 30 YWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRAATDHDPT 89
Y+ +KG KA+ RRA+ +KY L MG K T AI R A D +PT
Sbjct: 348 YYSLKGQHEKAVMYFRRALKLN-KKYLSAWTL-MGHEYVEMKNTPAAIDAYRRAVDINPT 405
Query: 90 FTYNHFSLANAYAVFGDFNSSLKHFAECLKLNP 122
+ L AY + G +L +F + + P
Sbjct: 406 DYRAWYGLGQAYEMMGMPFYALHYFRKSIFFLP 438
>At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 530
Score = 33.1 bits (72), Expect = 0.49
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 56 KDIALLSMGTILHRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFA 115
K AL+S+G +L S E+A+ + +PT+ H LA+ G+ +L H+
Sbjct: 199 KSAALISLGRLLEASDACEEALRL-------NPTYERAHQRLASLQLRLGEVEKALCHYN 251
Query: 116 ECLKLNPTFELAVRHKIAVLCHLYVSDTIEELKETLQKLRQEL--IEYARRESE--WLKS 171
E K T + + V C L D KE L++ L I Y S +
Sbjct: 252 EAGKYTETKHIEQVEDV-VKC-LRRCDEARRSKEWNVALKETLFAISYGADSSPRVYALQ 309
Query: 172 QAAFLRTMKHEEEF 185
A L +HEE +
Sbjct: 310 TEALLHLQRHEEAY 323
>At1g12270.1 68414.m01419 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 572
Score = 33.1 bits (72), Expect = 0.49
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 99 NAYAVFGDFNSSLKHFAECLKLNPTFELAVRHKIAVLCHLY-VSDTIEELKETLQ 152
NA GDF +++ HF E + L PT + ++ A L+ ++ + + KET++
Sbjct: 10 NAAFSSGDFTTAINHFTEAIALAPTNHVLFSNRSAAHASLHQYAEALSDAKETIK 64
Score = 31.1 bits (67), Expect = 2.0
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Query: 64 GTILHRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPT 123
G + ++ +AI A +P + + A +Y G LK +C++L+PT
Sbjct: 390 GNDFFKEQKYPEAIKHYTEAIKRNPNDHKAYSNRAASYTKLGAMPEGLKDAEKCIELDPT 449
Query: 124 FELAVRHKIAVLCHLYVSD-TIEELKETLQ--KLRQELIEYARR 164
F K AV L D +E + L+ QEL++ +R
Sbjct: 450 FSKGYSRKAAVQFFLKEYDNAMETYQAGLEHDPSNQELLDGVKR 493
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 32.3 bits (70), Expect = 0.86
Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 9/177 (5%)
Query: 139 YVSDTIEELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCKKMT 198
Y+ +T+ E K KL++ L++ + E LK+ A + +++ E I+ K
Sbjct: 572 YLQETLGEAKAESMKLKESLLD----KEEDLKNVTAEISSLREWEGSVLEKIEELSKVKE 627
Query: 199 NITGLKIKELKLQGDRNSL--LQYFLDSPMYNDQWLKEKGVLAIESAGNLQKLVKHIRQN 256
++ KE KLQ L+ + M + L ++ A LQ +V+
Sbjct: 628 SLVD---KETKLQSITQEAEELKGREAAHMKQIEELSTANASLVDEATKLQSIVQESEDL 684
Query: 257 SPKEATLKIRPEKLKVAEVEVLKEIGPTPIFPDIYTDMKEKTLIEVLAAAEFRKNNE 313
KEA + E+L VA + + D+KE+ + + E NE
Sbjct: 685 KEKEAGYLKKIEELSVANESLADNVTDLQSIVQESKDLKEREVAYLKKIEELSVANE 741
>At4g12400.1 68417.m01960 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 530
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 96 SLANAYAVFGDFNSSLKHFAECLKLNPTFELAVRHKIAVLCHLY-VSDTIEELKETLQ 152
S NA GD+ +++ HF E + L+PT + ++ A L+ + + + K+T++
Sbjct: 7 SKGNAAFSSGDYATAITHFTEAINLSPTNHILYSNRSASYASLHRYEEALSDAKKTIE 64
>At2g38440.1 68415.m04721 expressed protein
Length = 1399
Score = 31.9 bits (69), Expect = 1.1
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 324 ETSPFETGVMMYPPT--IKINRNHQDFDVDADWPSTDFCKENSPNFPENLEAIYP 376
E P G+ P + I++NR Q+ ++D +PS F E P PE++ + P
Sbjct: 1010 EFEPQSAGLEFAPQSAGIELNRPKQELNLDPTFPSFGFIPETIPPNPEDMPPLPP 1064
>At2g32450.1 68415.m03964 calcium-binding EF hand family protein low
similarity to O-linked GlcNAc transferase [Homo sapiens]
GI:2266994; contains Pfam profiles PF00036: EF hand,
PF00515: TPR Domain
Length = 802
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 61 LSMGTILHRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLK 119
+++G +L+ + ++A+V + A + PT HF N V G + S F L+
Sbjct: 233 MAIGKVLYEHQLFKEALVSFKRACELQPTDVRPHFKAGNCLYVLGKYKESKDEFLLALE 291
>At1g61720.1 68414.m06961 dihydroflavonol 4-reductase
(dihydrokaempferol 4-reductase) family (BAN) similar to
dihydroflavonol 4-reductase GI:1332411 from [Rosa
hybrida]
Length = 340
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 235 KGVLAIESAGNLQK-LVKHIRQNSPKEATLKIRPE-KLKVAEVEVLKEIGPTPIFPDIYT 292
K I GNL L+KH+ Q+ K T PE + K+A + L+E+G IF T
Sbjct: 11 KKACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGDLKIFKADLT 70
Query: 293 D 293
D
Sbjct: 71 D 71
>At4g39180.1 68417.m05548 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative
phosphatidylinositol-phosphatidylcholine transfer
protein SEC14, Yarrowia lipolytica, PIR2:S43745;
contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam
PF03765 : CRAL/TRIO, N-terminus
Length = 554
Score = 31.5 bits (68), Expect = 1.5
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 308 FRKNNERKPGQNKKESETSPFETGVMMYPPTIKINRNHQDFDVDADWPSTDFCKENSPNF 367
F NNE K K E E + ++ M I N D ADWP+ E +P
Sbjct: 354 FEYNNETK---KKCEPEETHKQSAAEMEKKFIDTN---VDAAAAADWPTKLNKAEKNPT- 406
Query: 368 PENLEAIYPTFMPFENKGI---RLMALLTDMIGV 398
+L+ +Y P E KG +MALL ++GV
Sbjct: 407 --DLKDVYSAVNPLERKGYLYGSVMALLMGIVGV 438
>At3g62940.2 68416.m07071 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 332
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 145 EELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCKKM-TNITGL 203
E ++E L + RQE+ + +E+E K+ A + K E++ + ++++ K+ T +
Sbjct: 26 ETVEEMLARHRQEIKQLQNKETEMKKAAA---KGSKAEQKAKKKQVEDDISKLSTKLKDK 82
Query: 204 KIKELKLQGDRNS 216
++KEL QG +S
Sbjct: 83 QLKELASQGFSSS 95
>At3g62940.1 68416.m07070 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 316
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 145 EELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCKKM-TNITGL 203
E ++E L + RQE+ + +E+E K+ A + K E++ + ++++ K+ T +
Sbjct: 10 ETVEEMLARHRQEIKQLQNKETEMKKAAA---KGSKAEQKAKKKQVEDDISKLSTKLKDK 66
Query: 204 KIKELKLQGDRNS 216
++KEL QG +S
Sbjct: 67 QLKELASQGFSSS 79
>At5g56290.1 68418.m07026 peroxisomal targeting signal type 1
receptor (PEX5) identical to GI:3603353; contains Pfam
profile PF00515 TPR Domain
Length = 728
Score = 31.1 bits (67), Expect = 2.0
Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
Query: 22 LHYNMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLR 81
+H + LY + +A+ + A+ P Y +G S ++ DAI +
Sbjct: 592 VHIVLGVLY-NLSREFDRAITSFQTALQLKPNDYS--LWNKLGATQANSVQSADAISAYQ 648
Query: 82 AATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTFELAVRH-KIAVLC 136
A D P + ++ +YA G + S+ ++ L +NP + A ++ ++++ C
Sbjct: 649 QALDLKPNYVRAWANMGISYANQGMYKESIPYYVRALAMNPKADNAWQYLRLSLSC 704
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 31.1 bits (67), Expect = 2.0
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 130 HKIAVLCHLYVSDTIEELKETLQKLRQELIEYARRESEWLKSQA 173
HK+ V+ H SD+ E KE+L + + E++E +RE E L+ +
Sbjct: 773 HKLKVISHARSSDS--EKKESLMRDKDEMLESLQREVELLEQDS 814
>At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 682
Score = 31.1 bits (67), Expect = 2.0
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 34 KGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRAATDHDPTFTYN 93
KGN +A+ RA+ +P + L S R E+A+ A DP++
Sbjct: 224 KGNYAEALALYDRAISLSPEN--PAYRSNRAAALAASGRLEEAVKECLEAVRCDPSYARA 281
Query: 94 HFSLANAYAVFGDFNSSLKH 113
H LA+ Y G+ ++ +H
Sbjct: 282 HQRLASLYLRLGEAENARRH 301
>At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 593
Score = 30.7 bits (66), Expect = 2.6
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 51 APRKYKDIALLSMGTILHRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSS 110
A R K AL ++G IL DA+ R A +P + H L N Y G+ S
Sbjct: 271 AYRSNKSAALTALGRIL-------DAVFECREAIRIEPHYHRAHHRLGNLYLRLGEVEKS 323
Query: 111 LKHF 114
+ HF
Sbjct: 324 IYHF 327
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 32 RVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRAATDHDPTFT 91
++ GN + + SRRA ++K G L +S R ++A DHDP +
Sbjct: 452 KLDGNNREVIMISRRAQAVTEARFK-------GNELFKSGRFQEACAAYGEGLDHDPRNS 504
Query: 92 YNHFSLANAYAVFGDFNSSLKHFAECLKLNPTF 124
+ A + G F+ S++ L + P +
Sbjct: 505 VLLCNRAACRSKLGQFDKSIEDCTAALSVRPGY 537
>At5g41150.1 68418.m05002 repair endonuclease (RAD1) (UVH1) contains
Pfam PF02732 : ERCC4 domain; contains TIGRFAM TIGR00596:
DNA repair protein (rad1); almost identical to 5' repair
endonuclease (GI:8926611) [Arabidopsis thaliana]
Length = 956
Score = 30.7 bits (66), Expect = 2.6
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 158 LIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCKKMTNITGLKIKEL-KLQGDRN- 215
+IE R + S FLR + + +YR+I CK + + L ++ L +L G
Sbjct: 881 IIENDIRAENYNTSAVEFLRRLPGVSDANYRSIMEKCKSLAELASLPVETLAELMGGHKV 940
Query: 216 -SLLQYFLDS 224
L+ FLD+
Sbjct: 941 AKSLREFLDA 950
>At3g27700.2 68416.m03459 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Query: 141 SDTIEELKETLQKLRQELIEYARRE 165
+DT+E LKETL+K +QE++E R E
Sbjct: 592 ADTLERLKETLRK-KQEMLEQKRNE 615
>At3g27700.1 68416.m03458 RNA recognition motif (RRM)-containing
protein contains Pfam profile: PF00076 RNA recognition
motif
Length = 908
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Query: 141 SDTIEELKETLQKLRQELIEYARRE 165
+DT+E LKETL+K +QE++E R E
Sbjct: 592 ADTLERLKETLRK-KQEMLEQKRNE 615
>At2g31760.1 68415.m03878 zinc finger protein-related contains low
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 514
Score = 30.7 bits (66), Expect = 2.6
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 136 CHLYVSDTIEELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNI----D 191
C+ YV D + K TL L+ E+ Y W+++Q++ L+ M E+F + D
Sbjct: 318 CNNYVEDADHD-KRTL--LQSEIKRYTHYYVRWVENQSSRLKAMSDLEKFQSVQLKQLSD 374
Query: 192 NNCK 195
N CK
Sbjct: 375 NQCK 378
>At4g14560.1 68417.m02242 auxin-responsive protein / indoleacetic
acid-induced protein 1 (IAA1) identical to SP|P49677
Auxin-responsive protein IAA1 (Indoleacetic acid-induced
protein 1) {Arabidopsis thaliana}
Length = 168
Score = 30.3 bits (65), Expect = 3.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 309 RKNNERKPGQNKKESETSPFETGVMMYPPTIKINRNHQDFDV 350
R NN+RK + +ES P +T ++ +PP +N+ + +V
Sbjct: 33 RSNNKRKNNDSTEESAPPPAKTQIVGWPPVRSNRKNNNNKNV 74
>At3g18420.1 68416.m02342 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile: PF00515 tetratricopeptide
repeat domain (TPR domain)
Length = 316
Score = 30.3 bits (65), Expect = 3.5
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Query: 74 EDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNP-TFELAVRHKI 132
E+A+ +L P T F +A G ++ + F E L+ NP +FE
Sbjct: 135 EEALKLLERLVAAQPEETEWKFLMARLLGEMGRPENARQMFEEILQRNPLSFE------- 187
Query: 133 AVLCHLYVSDTIEELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDN 192
A+ + + D E LQ+L L A E+E+L +A +R + + F +N+D
Sbjct: 188 ALFENALLMDRSGEGNAVLQRLEDAL---AVAEAEYLVKEARDVRLIIAQIHFLQKNVDE 244
Query: 193 NCKKMTNIT 201
K +T
Sbjct: 245 ALKSYEQLT 253
>At1g29640.1 68414.m03623 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 140
Score = 30.3 bits (65), Expect = 3.5
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 307 EFRKNNERKPGQNKKESETSPFETGVMMYPPTIKINRNHQDFDVDADWPSTD 358
+FR+N+ER ++ + S+T+P + V + ++ +N + + + ++ D
Sbjct: 35 DFRENSERVWNKSSRRSKTTPLPSAVTAFSSSLPVNIPMRRYSTEEEYSDDD 86
>At5g55740.1 68418.m06948 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 830
Score = 29.9 bits (64), Expect = 4.6
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 23 HYNMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRA 82
HY + G KA+ R + P K + S+ ++ ++TE + R
Sbjct: 686 HYGLMVDLLASAGETEKAL----RLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRK 741
Query: 83 ATDHDPTFTYNHFSLANAYAVFGDFNSSLK 112
+ +P + N+ +++NAYAV G ++ +K
Sbjct: 742 LLESEPENSGNYVTISNAYAVEGSWDEVVK 771
>At5g47820.2 68418.m05908 kinesin-like protein (FRA1) identical to
kinesin-like protein [Arabidopsis thaliana] GI:27260890;
contains Pfam profile PF00225: Kinesin motor domain
Length = 1035
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 207 ELKLQGDRNSLLQYFLDSPMYNDQWLKEKGVLAIESAGNLQKLVKHIRQNSPKEATLKIR 266
+L+ G+ +LLQY +S L EK V E +++V +RQ+ E K
Sbjct: 841 QLRSMGEAKNLLQYMFNSLAETRCQLWEKDVEIKEMKDQFKEIVGLLRQS---ELRRKEA 897
Query: 267 PEKLKVAEVEVLKEIGPTP 285
++LK+ E + +G P
Sbjct: 898 EKELKLREQAIATSLGTPP 916
>At5g47820.1 68418.m05907 kinesin-like protein (FRA1) identical to
kinesin-like protein [Arabidopsis thaliana] GI:27260890;
contains Pfam profile PF00225: Kinesin motor domain
Length = 1035
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 207 ELKLQGDRNSLLQYFLDSPMYNDQWLKEKGVLAIESAGNLQKLVKHIRQNSPKEATLKIR 266
+L+ G+ +LLQY +S L EK V E +++V +RQ+ E K
Sbjct: 841 QLRSMGEAKNLLQYMFNSLAETRCQLWEKDVEIKEMKDQFKEIVGLLRQS---ELRRKEA 897
Query: 267 PEKLKVAEVEVLKEIGPTP 285
++LK+ E + +G P
Sbjct: 898 EKELKLREQAIATSLGTPP 916
>At2g06210.2 68415.m00683 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 852
Score = 29.9 bits (64), Expect = 4.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 82 AATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLK 119
A T H PT +++ ++LA +Y GDF + ++ +K
Sbjct: 57 AVTTHGPTKSHSFYNLARSYHSKGDFEKAGMYYMAAIK 94
>At2g06210.1 68415.m00684 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 1064
Score = 29.9 bits (64), Expect = 4.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 82 AATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLK 119
A T H PT +++ ++LA +Y GDF + ++ +K
Sbjct: 269 AVTTHGPTKSHSFYNLARSYHSKGDFEKAGMYYMAAIK 306
>At1g05150.1 68414.m00518 calcium-binding EF hand family protein low
similarity to O-linked GlcNAc transferase [Homo sapiens]
GI:2266994; contains Pfam profiles PF00036: EF hand,
PF00515: TPR Domain
Length = 808
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 61 LSMGTILHRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLK 119
+++G +L+ + ++A+V + A + PT HF N V G S F L+
Sbjct: 238 MAIGRVLYEHQLFKEALVSFKRACELQPTDVRPHFKAGNCLYVLGKCKESKDEFLLALE 296
>At4g39820.1 68417.m05641 expressed protein
Length = 408
Score = 29.5 bits (63), Expect = 6.1
Identities = 15/58 (25%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 98 ANAYAVFGDFNSSLKHFAECLKLNPTFELAVRHKIAVLCHLY-VSDTIEELKETLQKL 154
A Y V D+ S+++ + +C++ + + +AV +K L +L +SD I+ ++ L+++
Sbjct: 301 ALVYVVAKDYVSAVREYDKCIERDNSDIIAVNNKALCLMYLRDLSDAIKVMESALERV 358
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 29.5 bits (63), Expect = 6.1
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 94 HFSLANAYAVFGDFNSSLKHFAECLKLNPTFELAVRHKIAVL-CHLYVSDTIEELKETLQ 152
+F+L +V + L+ E K P ELA+ H I+V+ LY ++ + L
Sbjct: 401 NFALEREISVQKELLEDLRE--ELQKEKPLLELAM-HDISVIQDELYKKANAFQVSQNLL 457
Query: 153 KLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCKKMT-NITGLK 204
+ ++ + A+ E + LKS+ A L + E++ + N ++ +T LK
Sbjct: 458 QEKESSLVEAKLEIQHLKSEQASLELLLQEKDEELAEARNKLGEVNQEVTELK 510
Score = 29.1 bits (62), Expect = 8.0
Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 16/165 (9%)
Query: 143 TIEELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCKKMTNITG 202
TI E + L++EL +R + L SQA + +KH+ R D + +
Sbjct: 155 TISEASLKHESLQEEL----KRANVELASQAREIEELKHK----LRERDEERAALQSSLT 206
Query: 203 LKIKELKLQ----GDRNSLLQYFLDSPMYNDQWLKEKGVLAIESAGNLQKLVKHIRQNSP 258
LK +EL+ +R+ + + Q L + + G + L + + +
Sbjct: 207 LKEEELEKMRQEIANRSKEVSMAISEFESKSQLLSKANEVVKRQEGEIYALQRALEEKEE 266
Query: 259 K----EATLKIRPEKLKVAEVEVLKEIGPTPIFPDIYTDMKEKTL 299
+ +AT K+ EKL+ E + K+ I D +KE+T+
Sbjct: 267 ELEISKATKKLEQEKLRETEANLKKQTEEWLIAQDEVNKLKEETV 311
>At3g28190.1 68416.m03522 hypothetical protein
Length = 112
Score = 29.5 bits (63), Expect = 6.1
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 144 IEELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCKKMTNITGL 203
+E KET+ K++ E +E K+Q A R M+ + E YR ++N + ++
Sbjct: 38 LESFKETV-KVQMESF------TEPSKAQMAKYREMEQKMEAKYREMENKLDNLVKLSMT 90
Query: 204 KIKELKLQGDR 214
+I ELK+ ++
Sbjct: 91 QISELKVTREK 101
>At3g16320.1 68416.m02061 cell division cycle family protein / CDC
family protein similar to SP|P30260|CC27_HUMAN Protein
CDC27Hs (Cell division cycle protein 27 homolog) Homo
sapiens, C-terminus similar to C-term of cell division
control protein 27 SP:P38042 (Saccharomyces cerevisiae);
contains Pfam profile PF00515 TPR Domain
Length = 727
Score = 29.5 bits (63), Expect = 6.1
Identities = 35/175 (20%), Positives = 79/175 (45%), Gaps = 14/175 (8%)
Query: 96 SLANAYAVFGDFNSSLKHFAECLKLNPTFELAVRHKIAVLC-HLYVSDTIEELKETLQKL 154
++ N Y++ D +++LK F ++LN F A H LC H + + +EE ++ +
Sbjct: 504 AVGNCYSLRKDHDTALKMFQRAIQLNERFTYA--H---TLCGHEFAA--LEEFEDAERCY 556
Query: 155 RQELIEYARRESEWLKSQAAFLRTMKHE---EEFDYR-NIDNNCKKMTNITGLKIKELKL 210
R+ L R + W +LR K E +F I+ + G+ + E K
Sbjct: 557 RKALGIDTRHYNAWYGLGMTYLRQEKFEFAQHQFQLALQINPRSSVIMCYYGIALHESKR 616
Query: 211 QGDRNSLLQ--YFLDSPMYNDQWLKEKGVLAIESAGNLQKLVKHIRQNSPKEATL 263
+ +++ D+ ++ K + ++ QK+++ +++ +P+E+++
Sbjct: 617 NDEALMMMEKAVLTDAKNPLPKYYKAHILTSLGDYHKAQKVLEELKECAPQESSV 671
Score = 29.1 bits (62), Expect = 8.0
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Query: 16 RNNSSWLHYNMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTED 75
R+ ++W Y + Y R + A + A+ PR + + G LH SKR ++
Sbjct: 565 RHYNAW--YGLGMTYLRQE-KFEFAQHQFQLALQINPRS--SVIMCYYGIALHESKRNDE 619
Query: 76 AIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNP 122
A++++ A D + A+ GD++ + K E + P
Sbjct: 620 ALMMMEKAVLTDAKNPLPKYYKAHILTSLGDYHKAQKVLEELKECAP 666
>At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 721
Score = 29.5 bits (63), Expect = 6.1
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Query: 64 GTILHRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPT 123
G + R +A+ + A + P+ H + A A + G ++ +KL+P
Sbjct: 265 GNEMFRKGCFAEALKLYDRAIELSPSNATYHSNRAAALSSLGQIGEAVNECEIAIKLDPN 324
Query: 124 FELAVRHKIAVLCHL-YVSD------TIEE-LKETLQKLRQEL------IEYARRESEW 168
F A ++L L YV + ++EE L T+ K+ Q++ YARR EW
Sbjct: 325 FARAHHRLASLLLRLGYVDNAGIHLYSVEEPLDPTVVKMLQQVDKHLNKCTYARRRGEW 383
>At3g13460.2 68416.m01694 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 664
Score = 29.5 bits (63), Expect = 6.1
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 249 LVKHI--RQNSPKEATLKIRPEKLKVAE----VEVLKE-IGPTPIFPDI-YTDMKEKTLI 300
L+KHI N K T +++K+ + V++ KE T I D + ++++KT++
Sbjct: 541 LLKHITLENNENKPVTNSRDTQEVKLEQGLKIVKIFKEHSSKTCILDDFSFYEVRQKTIL 600
Query: 301 EVLAAAEFRKNNERKPGQNKKESETS 326
E A ++ +E K KKES T+
Sbjct: 601 EKKAKQTQKQVSEEKVTDEKKESATA 626
>At3g13460.1 68416.m01693 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 667
Score = 29.5 bits (63), Expect = 6.1
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 249 LVKHI--RQNSPKEATLKIRPEKLKVAE----VEVLKE-IGPTPIFPDI-YTDMKEKTLI 300
L+KHI N K T +++K+ + V++ KE T I D + ++++KT++
Sbjct: 544 LLKHITLENNENKPVTNSRDTQEVKLEQGLKIVKIFKEHSSKTCILDDFSFYEVRQKTIL 603
Query: 301 EVLAAAEFRKNNERKPGQNKKESETS 326
E A ++ +E K KKES T+
Sbjct: 604 EKKAKQTQKQVSEEKVTDEKKESATA 629
>At3g11680.1 68416.m01432 expressed protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 488
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 139 YVSDTIEELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCKKMT 198
YV + +E K+++ + +R E LK+ A ++TM+++ +IDN+ K +
Sbjct: 306 YVLSNDKAPQEFESKIQEPITTMSREVGEALKAIAKSIKTMRNDSACVNAHIDNSKKAIK 365
Query: 199 NI 200
N+
Sbjct: 366 NL 367
>At2g39090.1 68415.m04803 tetratricopeptide repeat (TPR)-containing
protein low similarity to prediabetic NOD sera-reactive
autoantigen [Mus musculus] GI:6670773,
anaphase-promoting complex subunit 7 [Homo sapiens]
GI:6180015; contains Pfam profile PF00515: TPR Domain
Length = 558
Score = 29.5 bits (63), Expect = 6.1
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 59 ALLSMGTILHRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECL 118
A+L++ + R DA+ +L D H LA +A SL HF L
Sbjct: 451 AVLALAELHLMEGRNGDAVSLLERYLK-DYADDSLHVKLAQVFAATNMLQDSLSHFQAAL 509
Query: 119 KLNPTFELA 127
++NP E A
Sbjct: 510 RINPQNEAA 518
>At2g17980.1 68415.m02090 sec1 family protein similar to
SWISS-PROT:P22213 SLY1 protein [Saccharomyces
cerevisiae]; contains Pfam domain, PF00995: Sec1 family
Length = 627
Score = 29.5 bits (63), Expect = 6.1
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 199 NITGLKIKELKLQGDRNSLLQYFLDS--PMYNDQWLKEKGVLAIESAGNLQKLVKHIRQN 256
++ GLK+ +LK+QG++ + LDS P ++ E +A+E L K + + +
Sbjct: 267 DVLGLKLNQLKVQGEKGPPKSFELDSSDPFWSANSTLEFPDVAVEIETQLNKYKRDVEEV 326
Query: 257 SPK 259
+ K
Sbjct: 327 NKK 329
>At1g68600.1 68414.m07839 expressed protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 537
Score = 29.5 bits (63), Expect = 6.1
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Query: 268 EKLKVAEVEVLKEIGPTPIFPDIYTDMKEKTLIEVLAAAEFRKNNE----RKPGQNKKES 323
EKL ++ E+LK++ + D K L+ + A ++ E R+ Q K+
Sbjct: 368 EKLSLSLGEILKDVQRAAEALQMKIDSKSYLLVNSESWAAIKEQAEAEEARENDQEAKDD 427
Query: 324 ETSPFETGVMMYPPTIKINRNHQDFDVDADWPSTD 358
ET ++ ++ N NHQ D W ST+
Sbjct: 428 ETKVIKSLSQIWDTNN--NNNHQSNDQSQHWMSTE 460
>At1g61010.2 68414.m06870 cleavage and polyadenylation specificity
factor, putative similar to cleavage and polyadenylation
specificity factor 73 kDa subunit [Homo sapiens]
SWISS-PROT:Q9UKF6
Length = 693
Score = 29.5 bits (63), Expect = 6.1
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 189 NIDNNCKKMTNITGLKIKELKLQGDRNSLLQYFLDSPMYNDQWLKEKGVLAIESAGNLQK 248
NI K+ +K + G + + Y L ++ D L E G L I GN+ +
Sbjct: 596 NISREVPKIVMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQ 655
Query: 249 LVKHIRQNSPKEATLKIRPEKLKVAEVEVLKEIGPTPI 286
L K + + + LK E+++VA + + P P+
Sbjct: 656 LDKESGEVESEHSGLK---ERVRVAFERIQSAVKPIPL 690
>At1g61010.1 68414.m06869 cleavage and polyadenylation specificity
factor, putative similar to cleavage and polyadenylation
specificity factor 73 kDa subunit [Homo sapiens]
SWISS-PROT:Q9UKF6
Length = 693
Score = 29.5 bits (63), Expect = 6.1
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 189 NIDNNCKKMTNITGLKIKELKLQGDRNSLLQYFLDSPMYNDQWLKEKGVLAIESAGNLQK 248
NI K+ +K + G + + Y L ++ D L E G L I GN+ +
Sbjct: 596 NISREVPKIVMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQ 655
Query: 249 LVKHIRQNSPKEATLKIRPEKLKVAEVEVLKEIGPTPI 286
L K + + + LK E+++VA + + P P+
Sbjct: 656 LDKESGEVESEHSGLK---ERVRVAFERIQSAVKPIPL 690
>At1g49960.2 68414.m05605 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 398
Score = 29.5 bits (63), Expect = 6.1
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 348 FDVDADWPSTDFCKENSPNFPENLEAIYPTFMPFENKGIRLMALLTDMIG 397
F V P +FC +SPN+PE + + ++ + + ++L ++G
Sbjct: 11 FPVKDQLPGVEFCVSSSPNWPEGIVLGFQHYIVMLGTTVIIPSILVPLMG 60
>At1g49960.1 68414.m05606 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 526
Score = 29.5 bits (63), Expect = 6.1
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 348 FDVDADWPSTDFCKENSPNFPENLEAIYPTFMPFENKGIRLMALLTDMIG 397
F V P +FC +SPN+PE + + ++ + + ++L ++G
Sbjct: 11 FPVKDQLPGVEFCVSSSPNWPEGIVLGFQHYIVMLGTTVIIPSILVPLMG 60
>At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family
protein bHLH protein, Arabidopsis thaliana,
PATCHX:E255557
Length = 589
Score = 29.1 bits (62), Expect = 8.0
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 310 KNNERKPGQNKKESETSPFETGVMMYPPTIKINRNHQDFD 349
+N + + NKK S S E G++ + + + NH D +
Sbjct: 341 ENGQEEDSSNKKRSPVSNNEEGMLSFTSVLPCDSNHSDLE 380
>At3g21560.1 68416.m02719 UDP-glucosyltransferase, putative similar
to UDP-glucose:sinapate glucosyltransferase GI:9794913
from [Brassica napus]
Length = 496
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 511 VENKYRDIVLTSVASIYLEMGYFDEAFTVAEEAFRLSL 548
+ NK +D VL V YL +FD+ +EA R +L
Sbjct: 55 ISNKIQDRVLKPVGKGYLRYDFFDDGLPEDDEASRTNL 92
>At2g47620.1 68415.m05941 SWIRM domain-containing protein /
DNA-binding family protein contains similarity to
SWI/SNF complex 170 KDa subunit [Homo sapiens]
gi|1549241|gb|AAC50694; contains Pfam domains PF04433:
SWIRM domain, PF00249: Myb-like DNA-binding domain
Length = 512
Score = 29.1 bits (62), Expect = 8.0
Identities = 36/160 (22%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 154 LRQELIEYARRESEWLKSQAAFLRTMKHEEEF-DY---RNIDNNCKKMTNITGLKIKELK 209
L ++ E RRE ++++ RT K +E+ D+ + ++ C+++T + K
Sbjct: 23 LWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDTCRRLTFTSVRKF---- 78
Query: 210 LQGDRNSLLQYFLDSPM-----YNDQWLKEKGVLAIESAGNLQKLVKHIRQNSPKEATLK 264
L GD N L + FL ++ K +L++++A Q IR + +
Sbjct: 79 LVGDVNLLQKVFLFLEKWGLINFSSSLKKNDHLLSVDNAKIEQGTPAGIRVTATPNSLRP 138
Query: 265 IRPEKLKVAEVEVLKEIGPTPIFPDIYTDMKEKTLIEVLA 304
I L VE ++ P + D+++D+K+ + V A
Sbjct: 139 ITAPPLVEERVETGIKVPPLTSYSDVFSDLKKPDHVLVCA 178
>At1g65080.1 68414.m07378 OXA1 family protein contains Pfam PF02096:
60Kd inner membrane protein; similar to AtOXA1
(GI:6624207) [Arabidopsis thaliana]
Length = 525
Score = 29.1 bits (62), Expect = 8.0
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 59 ALLSMGTILHRSKRTEDAIVVLRAATDHDPTF 90
ALL + + L++ ++++A +LR DH+P +
Sbjct: 469 ALLLLSSALYKEGQSDEAAKILRVVVDHNPAY 500
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.134 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,412,002
Number of Sequences: 28952
Number of extensions: 577769
Number of successful extensions: 1839
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1771
Number of HSP's gapped (non-prelim): 92
length of query: 554
length of database: 12,070,560
effective HSP length: 85
effective length of query: 469
effective length of database: 9,609,640
effective search space: 4506921160
effective search space used: 4506921160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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