Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001028-TA|BGIBMGA001028-PA|IPR001440|Tetratricopeptide
TPR_1, IPR013026|Tetratricopeptide region
(554 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 35 0.026
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 33 0.14
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 32 0.24
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 31 0.55
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 30 0.97
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 29 1.7
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 29 1.7
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 29 1.7
SPCC24B10.22 ||SPCPB16A4.01|mitochondrial DNA polymerase gamma c... 28 3.0
SPBC660.08 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 3.0
SPBC1773.07c |sbp1|yrb1|Ran GTPase binding protein Sbp1|Schizosa... 28 3.0
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 28 3.0
SPBC336.09c |rrn7||RNA polymerase I transcription factor subunit... 28 3.9
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 28 3.9
SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces ... 27 5.2
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ... 27 5.2
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 6.8
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 27 6.8
SPAC1002.19 |urg1||GTP cyclohydrolase II |Schizosaccharomyces po... 27 6.8
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 6.8
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 27 6.8
SPBC19F8.02 |||nuclear distribution protein NUDC |Schizosaccharo... 27 6.8
SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces pomb... 27 6.8
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 35.1 bits (77), Expect = 0.026
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 34 KGNAPKAMECSRRAVHYAPRKYKDIALLSMGTI-LHRSKRTEDAIVVLRAATDHDPTFTY 92
KG K+++ + + P+ +ALL + LH S+ A++ A+ DP +
Sbjct: 21 KGQYSKSLKTIQSVLKKKPKHPDSVALLGLNLCKLHDSR---SALLKCGYASSIDPKSQF 77
Query: 93 NHFSLANAYAVFGDFNSSLKHFAECLKLNPTFE 125
+LA Y D+N+SLK + L ++P E
Sbjct: 78 CWHALAIVYRETKDYNNSLKCYQNALAISPNNE 110
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 32.7 bits (71), Expect = 0.14
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 60 LLSMGTILHRSKRTEDAI-VVLRAAT-DHDPTFTYNHFSLANAYAVFGDFNSSLKHFAEC 117
L ++G + K +AI +A T HDP F N A YA GDF +K +E
Sbjct: 154 LKTLGNKAYGQKEYANAIDYYTQAITCSHDPIFFSNR---AACYAAIGDFEQVIKDTSEA 210
Query: 118 LKLNPTFELAVRHKIA 133
L L+ ++ A+ + A
Sbjct: 211 LSLDSSYVKALNRRSA 226
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 31.9 bits (69), Expect = 0.24
Identities = 28/145 (19%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 39 KAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTEDAIVVLRAATDHDPTFTYNHFSLA 98
K+ E ++ +P + KD+ + S T L +++ + + +P + LA
Sbjct: 381 KSEEVFQKLRDLSPSRVKDMEVFS--TALWHLQKSVPLSYLAHETLETNPYSPESWCILA 438
Query: 99 NAYAVFGDFNSSLKHFAECLKLNPTFELAVRHKIAVLCHLYVSDTIEELKETLQKLRQEL 158
N +++ + + +LK ++L+PTFE A + H + ++ EE +++ R+ +
Sbjct: 439 NCFSLQREHSQALKCINRAIQLDPTFEYA----YTLQGHEHSAN--EEYEKSKTSFRKAI 492
Query: 159 IEYARRESEWLKSQAAFLRTMKHEE 183
R + W +L+T ++++
Sbjct: 493 RVNVRHYNAWYGLGMVYLKTGRNDQ 517
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1115
Score = 30.7 bits (66), Expect = 0.55
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 225 PMYNDQWLKEKGVLAIESAG-NLQKLVKHIRQNSPKEATLKIRPEKLKVAEVEVLKEIGP 283
P+ D+ L K ++ I+S LQ+ +R + K I+P KL +A V VL+ GP
Sbjct: 874 PLTTDEMLYPKMLVGIDSEFVALQQEETEVRSDGTKST---IKPSKLSLARVSVLRGEGP 930
Query: 284 TPIFPDI 290
P I
Sbjct: 931 NKGLPFI 937
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 29.9 bits (64), Expect = 0.97
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 62 SMGTILHRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLN 121
S+G + +K AIV ++A P T L AYA G + S+LK F L+
Sbjct: 655 SLGVLELNAKNFHKAIVHFQSALRISPKDTNAWSGLGEAYARSGRYVSALKAFNRASILD 714
Query: 122 PTFELAVRHKIAVL 135
P + V++ IA L
Sbjct: 715 PD-DWYVKYFIATL 727
Score = 29.5 bits (63), Expect = 1.3
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 15 RRNNSSWLHYNMASLYWRVKGNAPKAMECSRRAVHYAPRKYKDIALLSMGTILHRSKRTE 74
R+ +W H ++ L K N KA+ + A+ +P+ A +G RS R
Sbjct: 645 RKKKFNWHHTSLGVLELNAK-NFHKAIVHFQSALRISPKDTN--AWSGLGEAYARSGRYV 701
Query: 75 DAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNPTFELAVRHKIA 133
A+ A+ DP Y + +A G++ ++ +E L + + EL V+ +A
Sbjct: 702 SALKAFNRASILDPDDWYVKYFIATLEKDMGEYEVAVSTLSEILAVR-SKELCVQVSLA 759
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 29.1 bits (62), Expect = 1.7
Identities = 27/126 (21%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Query: 94 HFSLANAYAVFGDFNSSLKHFAECLKLNPTFELAVRHKIAVLCHLYVSDTIEELKETLQK 153
H L + + GD N+ LK ECL E A + + + + D IE K+ L+
Sbjct: 275 HTKLNSLQLIEGDLNACLKVLEECLVELDKLEHAT---VLLSTNQELCDQIEINKKKLEF 331
Query: 154 LRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCKKMTNITGLKIKELKLQGD 213
+++L++ E L+ + + + E + +DN ++ IT + K+++
Sbjct: 332 RKEQLLKQLSNAQEKLEHEQ---HSRNQKLEAAKQRMDNIREEYKVITQERNKKIQETEK 388
Query: 214 RNSLLQ 219
+N++++
Sbjct: 389 KNAMIE 394
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 29.1 bits (62), Expect = 1.7
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 240 IESAGNLQKLVKHIRQNSPKEATLKIRPEKLKVAEVEVLKEIGPTPIFPDIYTDMKEKTL 299
+ES+ L+ +K ++ S LK++ EK K+ E P+ + ++
Sbjct: 286 LESSPALRSTLKSLQSKSSPVKLLKLKEEKAKIKNQLFKSEEEKDPVGKQ---KLPLESS 342
Query: 300 IEVLAAAEFRKNNERKPGQNKKESETSPFETGVMMYP 336
+ L + K ++ P +NK+ T ETG +YP
Sbjct: 343 LSPLDHSSAEKEMQKAPAKNKRR-RTGSLETG--LYP 376
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 70 SKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSSLKHFAECLKLNP 122
+K + A+ + A + DPT + + A AY G F ++++ CL L+P
Sbjct: 96 AKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTCLSLDP 148
>SPCC24B10.22 ||SPCPB16A4.01|mitochondrial DNA polymerase gamma
catalytic subunit|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1018
Score = 28.3 bits (60), Expect = 3.0
Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 13/137 (9%)
Query: 49 HYAPRKYKDIALLSMGTILHRSKRTEDAIV----VLRAATDHDPTFTYNHFSLANAYA-V 103
H + KD+A L +SKR + A + +L+ + ++ +S + V
Sbjct: 307 HSSVNSLKDVAKFHCNITLDKSKRDDFASLEKEPILQKLNELITYCAHDTYSTHQVFKKV 366
Query: 104 FGDFNSSLKH---FAECLKLNPTFELAVRHKIAVLCHLYVSDTIEELKETLQKLRQELIE 160
F F H F+ L L F L V H Y++ E+ ++ +Q + Q+L +
Sbjct: 367 FPQFLEVCPHPATFSAMLSLGSVF-LPVNHSWT----RYINGVEEQYQQMIQLVDQKLSQ 421
Query: 161 YARRESEWLKSQAAFLR 177
YA + + + ++ L+
Sbjct: 422 YAEKAKDLINTKDTVLK 438
>SPBC660.08 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 350 VDADWPSTDFCKENSPNFPENLEAIYPTFMPFE 382
V+ W + DF KE + NFP+ E PT E
Sbjct: 284 VNGSWENNDFTKEINNNFPDRSET--PTLQTIE 314
>SPBC1773.07c |sbp1|yrb1|Ran GTPase binding protein
Sbp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 215
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 140 VSDTIEELKETLQ-KLRQELIEYARRESEWLKSQAAFLRTMKHEE 183
V E +ET++ K+R +L + + SEW + R +KH+E
Sbjct: 84 VETKTNEEEETVEFKMRAKLFRFDKAASEWKERGTGDARLLKHKE 128
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.3 bits (60), Expect = 3.0
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 5/119 (4%)
Query: 144 IEELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCKKMTNITGL 203
+E+L E Q +E +E + LKSQ FL E + + + I
Sbjct: 322 LEKLLEAAQSSFEEQLESHKEAEASLKSQINFLEKEVSSLESQLKLANERLRHYDEIEIS 381
Query: 204 KIKELKLQGDRNSLLQYFLD----SPMYNDQ-WLKEKGVLAIESAGNLQKLVKHIRQNS 257
+ ELK N+ ++ F S +Y+++ + K+K + LQ+ H+ + +
Sbjct: 382 DMSELKYSNLLNNSMKGFKGQSSVSDLYSERLYYKQKYEQTCQEVERLQRSYNHVMEEA 440
>SPBC336.09c |rrn7||RNA polymerase I transcription factor subunit
Rrn7 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 344 NHQDFDVDADWPSTDFCKENSP-NFPENLEAIYP 376
N+ + D W +F +EN+P N PE + ++P
Sbjct: 400 NNSEMDKYFQWYEKEFVEENNPNNIPEGILNVFP 433
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 27.9 bits (59), Expect = 3.9
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 19/111 (17%)
Query: 239 AIESAGNLQKLVKHIRQNSPKEATLKIRPEKLKVAEVEVLKEIGPTPIFPDIYTDMKEKT 298
++ SA LQ L+ H KE T K + L + + +LK PTP D++ K+
Sbjct: 553 SVHSAQLLQALL-HPSATETKEETPKKTSDSLSL--LTLLKSGLPTPA-----NDLQNKS 604
Query: 299 LIEVLAAAEFRKNNERKPGQNKKESETSPFETGVMMYPPTIKINRNHQDFD 349
+NNERK KE E + + T++I RN + +
Sbjct: 605 -----------QNNERKASSQVKELEVKNYSKSTDLLKKTLRIPRNDEPLE 644
>SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 278
Score = 27.5 bits (58), Expect = 5.2
Identities = 30/152 (19%), Positives = 64/152 (42%), Gaps = 10/152 (6%)
Query: 177 RTMKHEEEFDYRNIDNNCKKMTNITGLKIKELKLQGDRNSLLQYFLDSPMYNDQWLKEKG 236
R +HEE +RN+ ++++ +T L+ + D+ L D + + +
Sbjct: 29 RAKRHEERLSHRNMSQMERQLSELTQLESSQALNAHDKQLLQNLQRDMAIMKKKNIHGHR 88
Query: 237 VLAIESAGNLQKLVKHIRQNSPKEATLKIRPEKLKVAEVEVLKEIG-PTPIFP----DIY 291
V +ES K + RQ+ P++ + P K + + G P P P +
Sbjct: 89 VGRVES----DKTKEAERQHKPRKPFIPKNP-KRSIYYDPIFNPYGVPPPGMPYREKEEL 143
Query: 292 TDMKEKTLIEVLAAAEFRKNNERKPGQNKKES 323
+ ++++I++ +E + KP + K +S
Sbjct: 144 SSETDESVIDIPLPSEEYPFEDPKPREKKNKS 175
>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 565
Score = 27.5 bits (58), Expect = 5.2
Identities = 18/73 (24%), Positives = 29/73 (39%)
Query: 51 APRKYKDIALLSMGTILHRSKRTEDAIVVLRAATDHDPTFTYNHFSLANAYAVFGDFNSS 110
A R Y ++G + R ++AI + A T + L N Y D NS+
Sbjct: 434 ALRPYDQRMWQALGNCYEKIDRPQEAIKSYKRALLGSQTNSSILVRLGNLYEELQDLNSA 493
Query: 111 LKHFAECLKLNPT 123
+ +C+K T
Sbjct: 494 ASMYKQCIKTEET 506
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 97 LANAYAVFGDFNSSLKHFAECLKLNPTFELAVRHKIAVLCHLYVSDTIEELKETLQKLRQ 156
L N Y F F S + K + E +++ +I ++ + + LKE+ +K
Sbjct: 3319 LLNIYHYFEQFLSKVSEAIHTQK--QSLENSIKERILLMS--WKDTNVYALKESAKKSHA 3374
Query: 157 ELIEYARRESEWLKSQAAFLRTMKHE 182
EL + R E L+ + + KH+
Sbjct: 3375 ELFKVLHRYREVLRQPVSSYLSQKHD 3400
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 27.1 bits (57), Expect = 6.8
Identities = 15/65 (23%), Positives = 27/65 (41%)
Query: 487 SSLYWRVRSNNINALHCLLNAGRTVENKYRDIVLTSVASIYLEMGYFDEAFTVAEEAFRL 546
++L+W N+ +H LL AG V + + + M Y + F V E +
Sbjct: 239 TALHWAAAMGNLEMMHALLQAGANVVAVNYLQQTSLMRCVMFTMNYDLQTFEVVSELLQS 298
Query: 547 SLFEN 551
++ N
Sbjct: 299 AICMN 303
>SPAC1002.19 |urg1||GTP cyclohydrolase II |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 439
Score = 27.1 bits (57), Expect = 6.8
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 136 CHLYVSDTIEELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCK 195
C Y++ IEE + Q L+ Y R+E L +L K + D + +N K
Sbjct: 286 CRPYLTFGIEEAAKEAQNGGAGLVVYFRKEGRALGEVVKYLVYNKRKRTGD--SAENYFK 343
Query: 196 KMTNITGLKIKELKLQGDRNSLLQYF 221
+ + G +++++ Q +L +F
Sbjct: 344 RTEELAG--VRDMRFQALMPDILHWF 367
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.1 bits (57), Expect = 6.8
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 251 KHIRQNSPKEATLKIRPEKLKVAEVEVLKEIGPTPIFPDIYTDMKEKTLIEVLAAAEFRK 310
K +++ + K+ ++ +P K K E KEI D+ +K + +K
Sbjct: 11 KSVKETASKKGAIE-KPSKSKKITKEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKK 69
Query: 311 NNERKPGQNKKESETSPFET 330
+ +++ KKE +S E+
Sbjct: 70 SVKKQKKSKKKEESSSESES 89
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 27.1 bits (57), Expect = 6.8
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 146 ELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNIDNNCKKMTNITGLKI 205
E E KL Q L++ + +++++ +Q T E+ + + CK++ I +
Sbjct: 628 EANEKNYKLTQ-LLKTQKEDADFITNQYQNASTFAAEQSKEVAKLQAECKRLQAINSKVM 686
Query: 206 KELKLQGD 213
+E+K+ D
Sbjct: 687 EEVKVYND 694
>SPBC19F8.02 |||nuclear distribution protein NUDC
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 140 VSDTIEELKETLQKLRQELIEYARRESEWLKSQAAFLRTMKHEEEFDYRNI 190
+SD EE + T++K+ ++E +++ ++ K + MK E D+ N+
Sbjct: 115 LSDLDEETRATVEKM---MLEQSQKRTDEQKRKDVLQNFMKQHPELDFSNV 162
>SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 910
Score = 27.1 bits (57), Expect = 6.8
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 108 NSSLKHFAECLKLNPTFELAVRHKIAVLCHLYVSDTIEELKETLQKLRQELIEYARRESE 167
+S+ + F L NP L+ + VLC + EL++ QK+ Q +E ++
Sbjct: 835 DSAFRGFCNILACNPQ-ALSYLLPMFVLCVAEYENPSAELRDMFQKILQGSVELFNGKAS 893
Query: 168 WLKS 171
W S
Sbjct: 894 WQAS 897
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.134 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,657,862
Number of Sequences: 5004
Number of extensions: 117266
Number of successful extensions: 364
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 347
Number of HSP's gapped (non-prelim): 32
length of query: 554
length of database: 2,362,478
effective HSP length: 76
effective length of query: 478
effective length of database: 1,982,174
effective search space: 947479172
effective search space used: 947479172
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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