GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001027-TA|BGIBMGA001027-PA|IPR000223|Peptidase S26A,
signal peptidase I, IPR011056|Peptidase S24 and S26, C-terminal
region, IPR006198|Peptidase S24, S26A and S26B
         (153 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   2.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   2.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.6  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query: 107 RGHVWLEGDNSSNSADS 123
           RG+ WL  DNS+ S  S
Sbjct: 25  RGNTWLSLDNSNMSMSS 41


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query: 107 RGHVWLEGDNSSNSADS 123
           RG+ WL  DNS+ S  S
Sbjct: 25  RGNTWLSLDNSNMSMSS 41


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 49  NNILLTEHISP 59
           N+IL+ EH+SP
Sbjct: 667 NSILMIEHLSP 677


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.140    0.444 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,699
Number of Sequences: 429
Number of extensions: 2423
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 153
length of database: 140,377
effective HSP length: 53
effective length of query: 100
effective length of database: 117,640
effective search space: 11764000
effective search space used: 11764000
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 40 (20.2 bits)