Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001027-TA|BGIBMGA001027-PA|IPR000223|Peptidase S26A,
signal peptidase I, IPR011056|Peptidase S24 and S26, C-terminal
region, IPR006198|Peptidase S24, S26A and S26B
(153 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g53530.1 68414.m06072 signal peptidase I family protein conta... 113 4e-26
At1g23465.1 68414.m02941 signal peptidase-related 113 7e-26
At1g29960.1 68414.m03663 signal peptidase I family protein / MAD... 111 2e-25
At3g08980.1 68416.m01049 signal peptidase I family protein simil... 84 5e-17
At3g24590.1 68416.m03089 signal peptidase I family protein conta... 45 2e-05
At2g30440.1 68415.m03709 chloroplast thylakoidal processing pept... 45 2e-05
At1g06870.1 68414.m00731 signal peptidase, putative similar to c... 45 2e-05
At2g31140.1 68415.m03802 expressed protein 45 3e-05
At1g06200.1 68414.m00652 expressed protein 39 0.002
At2g26330.1 68415.m03159 leucine-rich repeat protein kinase, put... 35 0.021
At5g59680.1 68418.m07482 leucine-rich repeat protein kinase, put... 30 0.79
At3g16857.2 68416.m02153 two-component responsive regulator fami... 29 1.8
At3g16857.1 68416.m02152 two-component responsive regulator fami... 29 1.8
At3g13065.1 68416.m01632 leucine-rich repeat transmembrane prote... 29 1.8
At4g12410.1 68417.m01962 auxin-responsive family protein similar... 28 2.4
At1g48760.2 68414.m05457 delta-adaptin, putative similar to SP|O... 28 2.4
At1g48760.1 68414.m05456 delta-adaptin, putative similar to SP|O... 28 2.4
At4g19450.1 68417.m02861 nodulin-related weak similarity to nodu... 28 3.2
At1g11330.1 68414.m01301 S-locus lectin protein kinase family pr... 28 3.2
At5g12940.1 68418.m01484 leucine-rich repeat family protein cont... 27 4.2
At2g29000.1 68415.m03527 leucine-rich repeat family protein / pr... 27 7.3
At2g28990.1 68415.m03526 leucine-rich repeat protein kinase, put... 27 7.3
At5g49770.1 68418.m06164 leucine-rich repeat transmembrane prote... 26 9.7
At5g44320.1 68418.m05427 eukaryotic translation initiation facto... 26 9.7
At4g02390.1 68417.m00323 poly (ADP-ribose) polymerase / NAD(+) A... 26 9.7
At4g01690.2 68417.m00220 protoporphyrinogen oxidase (PPOX) ident... 26 9.7
At4g01690.1 68417.m00219 protoporphyrinogen oxidase (PPOX) ident... 26 9.7
At2g16750.1 68415.m01921 protein kinase family protein contains ... 26 9.7
At2g04790.2 68415.m00491 expressed protein 26 9.7
At2g04790.1 68415.m00490 expressed protein 26 9.7
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 26 9.7
At1g63430.1 68414.m07173 leucine-rich repeat transmembrane prote... 26 9.7
>At1g53530.1 68414.m06072 signal peptidase I family protein contains
similarity to SP|P28627 Mitochondrial inner membrane
protease subunit 1 (EC 3.4.99.-) {Saccharomyces
cerevisiae}; contains Pfam profile PF00461: Signal
peptidase I
Length = 168
Score = 113 bits (273), Expect = 4e-26
Identities = 56/145 (38%), Positives = 85/145 (58%), Gaps = 7/145 (4%)
Query: 14 IGYALQYACITHCTFEYIGDFVMCSGPSMEPTLE-SNNILLTEHISPRLQKLRRGDIIIA 72
+ ++ C+ H T YI GPSM PTL + +++L EH+S R K+ GD+++
Sbjct: 23 VSIVAKFLCLLHVTDRYIISTTHVHGPSMLPTLNLTGDVILAEHLSHRFGKIGLGDVVLV 82
Query: 73 KSPSNPRQNICKRIKGLPGDKVRGNFPKR------SQVVPRGHVWLEGDNSSNSADSRIY 126
+SP +P++ + KRI GL GD++ + S +VP+GHVW++GDN S DSR +
Sbjct: 83 RSPRDPKRMVTKRILGLEGDRLTFSADPLVGDASVSVLVPKGHVWIQGDNLYASTDSRHF 142
Query: 127 GPVPAGLIRSRVVCRVWPLDKITSL 151
GPVP LI + + RVWP + SL
Sbjct: 143 GPVPYSLIEGKALLRVWPPEYFGSL 167
>At1g23465.1 68414.m02941 signal peptidase-related
Length = 155
Score = 113 bits (271), Expect = 7e-26
Identities = 61/128 (47%), Positives = 79/128 (61%), Gaps = 7/128 (5%)
Query: 22 CITHCTFEYIGDFVMCSGPSMEPTLE-SNNILLTEHISPRLQKLRRGDIIIAKSPSNPRQ 80
C H T Y+G GPSM PTL S N+LL E IS R QK RGDI++ +SP NP +
Sbjct: 28 CFLHVTTNYLGFMAYAYGPSMIPTLHPSGNMLLAERISKRYQKPSRGDIVVIRSPENPNK 87
Query: 81 NICKRIKGLPGDKVRGNF-PKRSQ-----VVPRGHVWLEGDNSSNSADSRIYGPVPAGLI 134
KR+ G+ GD + P +S VVP+GHV+++GD + NS DSR +GPVP GLI
Sbjct: 88 TPIKRVVGVEGDCISFVIDPVKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGPVPYGLI 147
Query: 135 RSRVVCRV 142
+ RV+ RV
Sbjct: 148 QGRVLWRV 155
>At1g29960.1 68414.m03663 signal peptidase I family protein /
MADS-box protein-related similar to inner mitochondrial
membrane peptidase 2 [Homo sapiens] GI:14030456;
contains Pfam profiles PF00461: Signal peptidase I,
contains Pfam profile PF00319: SRF-type transcription
factor (DNA-binding and dimerisation domain); MADS-box
protein AGL64
Length = 310
Score = 111 bits (267), Expect = 2e-25
Identities = 58/127 (45%), Positives = 78/127 (61%), Gaps = 7/127 (5%)
Query: 22 CITHCTFEYIGDFVMCSGPSMEPTLE-SNNILLTEHISPRLQKLRRGDIIIAKSPSNPRQ 80
C H T Y+G GPSM PTL S N+LL E IS R QK RGDI++ +SP NP +
Sbjct: 28 CFLHVTTNYLGFMAYAYGPSMTPTLHPSGNVLLAERISKRYQKPSRGDIVVIRSPENPNK 87
Query: 81 NICKRIKGLPGDKV------RGNFPKRSQVVPRGHVWLEGDNSSNSADSRIYGPVPAGLI 134
KR+ G+ GD + R + ++ VVP+GHV+++GD + NS DSR +G VP GLI
Sbjct: 88 TPIKRVIGIEGDCISFVIDSRKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGTVPYGLI 147
Query: 135 RSRVVCR 141
+ RV+ R
Sbjct: 148 QGRVLWR 154
>At3g08980.1 68416.m01049 signal peptidase I family protein similar
to SP|P46972 Mitochondrial inner membrane protease
subunit 2 (EC 3.4.99.-) {Saccharomyces cerevisiae};
contains Pfam profile PF00461: Signal peptidase I
Length = 154
Score = 83.8 bits (198), Expect = 5e-17
Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 10/120 (8%)
Query: 39 GPSMEPTL--ESNNIL----LTEHISPRLQKLRRGDIIIAKSPSNPRQNICKRIKGLPGD 92
G SM PT + N+ L L + + K RGD+++ SP++ KRI G+PG+
Sbjct: 36 GDSMSPTFNPQRNSYLDDYVLVDKFCLKDYKFARGDVVVFSSPTHFGDRYIKRIVGMPGE 95
Query: 93 KVRGNFPKRSQV-VPRGHVWLEGDNSSNSADSRIYGPVPAGLIRSRVVCRVWPLDKITSL 151
+ + R + VP GH W+EGDN ++S DSR +GP+P GLI+ RV +WP +I+ +
Sbjct: 96 WISSS---RDVIRVPEGHCWVEGDNKTSSLDSRSFGPIPLGLIQGRVTRVMWPPQRISKI 152
>At3g24590.1 68416.m03089 signal peptidase I family protein contains
Pfam profile: PF00461 signal peptidase I
Length = 291
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 105 VPRGHVWLEGDNSSNSADSRIYGPVPAGLIRSRVVCRVWPLDKIT 149
VP V++ GDN +NS DS ++GP+P I R V R WP ++++
Sbjct: 234 VPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGRSVFRYWPPNRVS 278
>At2g30440.1 68415.m03709 chloroplast thylakoidal processing
peptidase identical to chloroplast thylakoidal
processing peptidase [Arabidopsis thaliana] GI:2769566;
contains Pfam profile PF00461: Signal peptidase I;
non-consensus CG acceptor site at the intron|exon 8
boundary
Length = 340
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 105 VPRGHVWLEGDNSSNSADSRIYGPVPAGLIRSRVVCRVWPLDKIT 149
VP+G+V++ GDN + S DS +GP+P I R V R WP K++
Sbjct: 279 VPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRSVFRYWPPSKVS 323
Score = 27.9 bits (59), Expect = 3.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 41 SMEPTLESNNILLTEHISPRLQKLRRGDIIIAKSP 75
SM PTL+ + ++ E +S +K DI+I K+P
Sbjct: 184 SMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAP 218
>At1g06870.1 68414.m00731 signal peptidase, putative similar to
chloroplast thylakoidal processing peptidase GB:CAA71502
GI:2769566 from [Arabidopsis thaliana]; contains Pfam
profile PF00461: Signal peptidase I
Length = 367
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 105 VPRGHVWLEGDNSSNSADSRIYGPVPAGLIRSRVVCRVWPLDKITSL 151
VP G+V++ GDN + S DS +GP+P I R V R WP K++ +
Sbjct: 306 VPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPSKVSDI 352
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 41 SMEPTLESNNILLTEHISPRLQKLRRGDIIIAKSP 75
SM PTL+ + ++ E +S +K DI+I K+P
Sbjct: 214 SMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAP 248
>At2g31140.1 68415.m03802 expressed protein
Length = 205
Score = 44.8 bits (101), Expect = 3e-05
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 39 GPSMEPTLESN-NILLTEHIS-PRLQKLRRGDIIIAKSPSNPRQNICKRIKGLPG-DKVR 95
GP M PT+ +N N LL I + + GD ++ K P++ + + +R+ + G + V
Sbjct: 57 GPEMSPTMTANENTLLIRKIPIANTRFVFIGDAVVLKDPNDSDKYLVRRLAAVEGFEMVS 116
Query: 96 GNFPKRSQVVPRGHVWLEGDNSSNSA----DSRIYGPVPAGLIRSRVV 139
G+ + V+ + W+ +N A DSR +GPV I R +
Sbjct: 117 GDEKEEPFVLEKNQCWVTAENQELKAKEAYDSRTFGPVSTADIVGRAI 164
>At1g06200.1 68414.m00652 expressed protein
Length = 206
Score = 38.7 bits (86), Expect = 0.002
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Query: 39 GPSMEPTLESNNILLTEHISPRLQK--LRRGDIIIAKSPSNPRQNICKRIKGLPGDKVRG 96
G M PT+ +N L P + + GD ++ K P+ + I +R+ L G ++
Sbjct: 57 GKEMAPTMGTNESTLLVRKLPVVDTRYIFVGDAVVLKDPNETNKYIVRRLAALEGSEMVS 116
Query: 97 NFPKRSQ-VVPRGHVWLEGDN----SSNSADSRIYGPVPAGLIRSRVV 139
+ K V+ + W+ +N S + DSR +GP+ I R +
Sbjct: 117 SDEKDEPFVLEKDQCWVVAENQEMKSKEAYDSRTFGPISMADIVGRAI 164
>At2g26330.1 68415.m03159 leucine-rich repeat protein kinase,
putative (ERECTA) identical to uncharacterized receptor
protein kinase ERECTA [Arabidopsis thaliana]
gi|1389566|dbj|BAA11869; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 976
Score = 35.1 bits (77), Expect = 0.021
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 46 LESNNILLTEHISPRLQKLRR-GDIIIAKSP-SNPRQNICKRIKGLPGDKVRGNFPKRSQ 103
LE N+ LT HI P L KL D+ +A + P + L V GN K S
Sbjct: 336 LELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGPIPDHLSSCTNLNSLNVHGN--KFSG 393
Query: 104 VVPRGHVWLEGDNSSNSADSRIYGPVPAGLIR 135
+PR LE N + + I GP+P L R
Sbjct: 394 TIPRAFQKLESMTYLNLSSNNIKGPIPVELSR 425
>At5g59680.1 68418.m07482 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 882
Score = 29.9 bits (64), Expect = 0.79
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Query: 15 GYALQYACITHCTFEYIGDFVMCSGPSMEPTLESNNILLTEHISPRLQKLRRGDIIIAKS 74
G L+ A EY+ + C+ P + +++ NILL EH +L D +++S
Sbjct: 677 GTRLRIAAEAALGLEYL--HIGCTPPMVHRDVKTTNILLDEHYKAKL-----ADFGLSRS 729
Query: 75 -PSNPRQNICKRIKGLPGDKVRGNFPKRSQVVPRGHVWLE 113
P ++ I G PG ++S V G V LE
Sbjct: 730 FPVGGESHVSTVIAGTPGYLDPDRLSEKSDVYSFGIVLLE 769
>At3g16857.2 68416.m02153 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver
domain; similar to ARR1 protein GB:BAA74528 from
[Arabidopsis thaliana] (Plant Cell Physiol. (1998) 39
(11), 1232-1239)
Length = 690
Score = 28.7 bits (61), Expect = 1.8
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 62 QKLRRGDI-IIAKSPSNPRQN-ICKRIKGLPGDKVRGNFPKRSQVVPRGHVWLEGDNSSN 119
Q L RG ++ S S+ RQ + RI G R N P+ S+V+P + L +SS+
Sbjct: 447 QSLPRGPPPMLTSSQSSIRQPMLSNRISERSGFSGRNNIPESSRVLPTSYTNLTTQHSSS 506
Query: 120 SADSRIYGP 128
S + P
Sbjct: 507 SMPYNNFQP 515
>At3g16857.1 68416.m02152 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver
domain; similar to ARR1 protein GB:BAA74528 from
[Arabidopsis thaliana] (Plant Cell Physiol. (1998) 39
(11), 1232-1239)
Length = 669
Score = 28.7 bits (61), Expect = 1.8
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 62 QKLRRGDI-IIAKSPSNPRQN-ICKRIKGLPGDKVRGNFPKRSQVVPRGHVWLEGDNSSN 119
Q L RG ++ S S+ RQ + RI G R N P+ S+V+P + L +SS+
Sbjct: 447 QSLPRGPPPMLTSSQSSIRQPMLSNRISERSGFSGRNNIPESSRVLPTSYTNLTTQHSSS 506
Query: 120 SADSRIYGP 128
S + P
Sbjct: 507 SMPYNNFQP 515
>At3g13065.1 68416.m01632 leucine-rich repeat transmembrane protein
kinase, putative leucine-rich repeat transmembrane
protein kinase 1 GB:AAC27894 from [Zea mays]
Length = 646
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 18 LQYACITHCTFEYIGDFVMCSGPSMEPTLESNNILLTEHISPRL 61
++ A T EY+ + CS P + ++S+NILL ++PRL
Sbjct: 477 IRIALGTAKAIEYLHE--TCSPPLVHKNIKSSNILLDNELNPRL 518
>At4g12410.1 68417.m01962 auxin-responsive family protein similar to
GP:546362 small auxin up RNA {Arabidopsis thaliana};
auxin-induced protein 10A -Glycine max,PID:g255579
Length = 157
Score = 28.3 bits (60), Expect = 2.4
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 71 IAKSPSNPRQNICKRIKGLPG-DKVR-GNFPKRS-QVVPRGHVWLEGDNSSNSADSRIYG 127
+A+ S + +C K PG +++R G PK+S +VVPRGH+ + S + R+
Sbjct: 39 LARCLSRGAKRLCGGSKKNPGQNQIRLGKDPKKSNRVVPRGHLVVHVGESDDDT-RRVVV 97
Query: 128 PV 129
PV
Sbjct: 98 PV 99
>At1g48760.2 68414.m05457 delta-adaptin, putative similar to
SP|O14617 Adapter-related protein complex 3 delta 1
subunit (Delta-adaptin 3) {Homo sapiens}; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 869
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 29 EYIGDFVMCSGPSMEPTLESNNILLTEHISPRLQKLRRGDIIIAKSPSNP 78
E +GD G ++P +ES+++ T+ IS + KLR D A S S+P
Sbjct: 644 ENLGDLEEICGEHLKP-VESDSVSYTDKISFSVSKLRIRDQQEATSSSSP 692
>At1g48760.1 68414.m05456 delta-adaptin, putative similar to
SP|O14617 Adapter-related protein complex 3 delta 1
subunit (Delta-adaptin 3) {Homo sapiens}; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 869
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 29 EYIGDFVMCSGPSMEPTLESNNILLTEHISPRLQKLRRGDIIIAKSPSNP 78
E +GD G ++P +ES+++ T+ IS + KLR D A S S+P
Sbjct: 644 ENLGDLEEICGEHLKP-VESDSVSYTDKISFSVSKLRIRDQQEATSSSSP 692
>At4g19450.1 68417.m02861 nodulin-related weak similarity to
nodule-specific protein Nlj70 [Lotus japonicus]
GI:3329366
Length = 572
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 12 GFIGYALQYACITH-CTFEYIGDFVMC 37
GF+GY +Q+ ITH + YI F+ C
Sbjct: 82 GFVGYGVQWLVITHFISLPYIMVFLCC 108
>At1g11330.1 68414.m01301 S-locus lectin protein kinase family
protein contains Pfam domains, PF00954: S-locus
glycoprotein family, PF00069: Protein kinase domain, and
PF01453: Lectin (probable mannose binding)
Length = 840
Score = 27.9 bits (59), Expect = 3.2
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 46 LESNNILLTEHISPRLQKLRRGDIIIA-KSPSNPRQNICKRIKGLPGDKVRGNFPKRSQV 104
L+++NILL E+++P++ I A + +N R+ + P + G F ++S V
Sbjct: 648 LKASNILLDENLNPKISDFGLARIFRANEDEANTRRVVGTYGYMSPEYAMEGFFSEKSDV 707
Query: 105 VPRGHVWLE 113
G ++LE
Sbjct: 708 FSLGVIFLE 716
>At5g12940.1 68418.m01484 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 371
Score = 27.5 bits (58), Expect = 4.2
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 39 GPSMEPTLES--NNILLTEHISPRLQKLRR-GDIIIA--KSPSNPRQNICKRIKGLPGDK 93
G S +P + + L+T ISP + KL R IIIA K S + + + L
Sbjct: 81 GESEDPLFQKAKRSGLMTGSISPSICKLTRLSGIIIADWKGISGVIPSCIENLPFLRHLD 140
Query: 94 VRGNFPKRSQVVPRGHVWLEGDNSSNSADSRIYGPVPAGLIR 135
+ GN K S V+P L N AD+ +YG +P + R
Sbjct: 141 LVGN--KFSGVIPANIGKLLRLKVLNLADNHLYGVIPPSITR 180
>At2g29000.1 68415.m03527 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 872
Score = 26.6 bits (56), Expect = 7.3
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 37 CSGPSMEPTLESNNILLTEHISPRLQKLRRGDIIIAKS-PSNPRQNICKRIKGLPG---- 91
C P + +++ NILL EH +L D +++S P ++ + G PG
Sbjct: 682 CEPPMIHRDVKTTNILLDEHFHAKL-----ADFGLSRSFPVGVESHVSTNVAGTPGYLDP 736
Query: 92 DKVRGNF-PKRSQVVPRGHVWLE 113
+ R N+ ++S V G V LE
Sbjct: 737 EYYRTNWLTEKSDVYSMGIVLLE 759
>At2g28990.1 68415.m03526 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 884
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 37 CSGPSMEPTLESNNILLTEHISPRLQKLRRGDIIIAKS-PSNPRQNICKRIKGLPG 91
C P + +++ NILL +H+ +L D +++S P +N+ + G PG
Sbjct: 694 CVPPMVHRDIKTTNILLDQHLQAKL-----ADFGLSRSFPIGNEKNVSTVVAGTPG 744
>At5g49770.1 68418.m06164 leucine-rich repeat transmembrane protein
kinase, putative
Length = 946
Score = 26.2 bits (55), Expect = 9.7
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 40 PSMEPTLESNNILLTEHISPRLQKLRRGDIIIAKSPSNP-RQNICKRIKGLPG 91
P + ++SNNILL EH++ ++ D ++K +P + ++ ++KG G
Sbjct: 753 PIIHRDVKSNNILLDEHLTAKV-----ADFGLSKLVGDPEKAHVTTQVKGTMG 800
>At5g44320.1 68418.m05427 eukaryotic translation initiation factor 3
subunit 7, putative / eIF-3 zeta, putative / eIF3d,
putative similar to initiation factor 3d [Arabidopsis
thaliana] GI:12407755, SP|O15371 Eukaryotic translation
initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3 p66)
(eIF3d) {Homo sapiens}; contains Pfam profile PF05091:
Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)
Length = 588
Score = 26.2 bits (55), Expect = 9.7
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 46 LESNNIL-LTEHISPRLQKLRRGDIIIAKSPSNPRQNICK-RIKGLPGDKVRGNFPKRSQ 103
L +NN+ + + I KL G ++ K PS P+ I + D V P+ Q
Sbjct: 496 LNTNNMWGIVKSIVDLCMKLSEGKYVLVKDPSKPQVRIYEVPADAFDNDYVEEPLPEDEQ 555
Query: 104 VVP 106
V P
Sbjct: 556 VQP 558
>At4g02390.1 68417.m00323 poly (ADP-ribose) polymerase / NAD(+)
ADP-ribosyltransferase / poly[ADP-ribose] synthetase
(APP) identical to SP|Q11207 Poly [ADP-ribose]
polymerase (EC 2.4.2.30) (PARP) (ADPRT) (NAD(+) ADP-
ribosyltransferase) (Poly[ADP-ribose] synthetase)
{Arabidopsis thaliana}
Length = 637
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 92 DKVRGNFPKRSQVVP--RGHVWLEGDNSSNSADSRIYGPVPA 131
DK + + R + +P + + WLE D DS + +P+
Sbjct: 236 DKTKNYWSDRKEFIPHPKSYTWLEMDYGKEENDSPVNNDIPS 277
>At4g01690.2 68417.m00220 protoporphyrinogen oxidase (PPOX)
identical to SP|P55826
Length = 506
Score = 26.2 bits (55), Expect = 9.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 92 DKVRGNFPKRSQVVPRGHVWLEGDNSSNSADSRIYGPVPAGL 133
D+V GN R + G +W EG NS +D + V +GL
Sbjct: 93 DRVGGNIITREE---NGFLWEEGPNSFQPSDPMLTMVVDSGL 131
>At4g01690.1 68417.m00219 protoporphyrinogen oxidase (PPOX)
identical to SP|P55826
Length = 537
Score = 26.2 bits (55), Expect = 9.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 92 DKVRGNFPKRSQVVPRGHVWLEGDNSSNSADSRIYGPVPAGL 133
D+V GN R + G +W EG NS +D + V +GL
Sbjct: 93 DRVGGNIITREE---NGFLWEEGPNSFQPSDPMLTMVVDSGL 131
>At2g16750.1 68415.m01921 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 617
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 37 CSGPSMEPTLESNNILLTEHISPRL 61
CS P + ++S+N+LL++ P+L
Sbjct: 391 CSNPVIHRDVKSSNVLLSDEFEPQL 415
>At2g04790.2 68415.m00491 expressed protein
Length = 164
Score = 26.2 bits (55), Expect = 9.7
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 64 LRRGDIIIAKSPSNPRQNICKRIKGLPGDKVRGN-FPKRSQVVPRGHVWLEGDNSSNSA 121
+R+ ++ P NP ++I I L G+ + G +R + VPR W+ G + N A
Sbjct: 61 IRQEVLVFDFQPRNP-ESIEAAISLLSGNLIPGVVLQRRLKNVPRQRCWMVGPSKGNDA 118
>At2g04790.1 68415.m00490 expressed protein
Length = 152
Score = 26.2 bits (55), Expect = 9.7
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 64 LRRGDIIIAKSPSNPRQNICKRIKGLPGDKVRGN-FPKRSQVVPRGHVWLEGDNSSNSA 121
+R+ ++ P NP ++I I L G+ + G +R + VPR W+ G + N A
Sbjct: 61 IRQEVLVFDFQPRNP-ESIEAAISLLSGNLIPGVVLQRRLKNVPRQRCWMVGPSKGNDA 118
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 26.2 bits (55), Expect = 9.7
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 51 ILLTEHISPRLQKLRRGDIIIAKSPSNPRQNICKRIKGLPGDKVRGNFPKRSQVVPRGH 109
+L H+S R +K +I++ P N G G+ GNFP + VPRG+
Sbjct: 228 LLAAHHLSRRCRK-GAAEILVNYDDLCPSGNCSYEKSG--GNDTLGNFPICGKDVPRGY 283
>At1g63430.1 68414.m07173 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profiles: PF00069
Eukaryotic protein kinase domain, PF00560 Leucine Rich
Repeat; contains 1 predicted transmembrane domain
Length = 664
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 46 LESNNILLTEHISPRLQKLRRGDIIIAKSPSNPR 79
L SN I LTE +P+L I+A+S N R
Sbjct: 491 LSSNAIYLTEDFTPKLVDFECWKTILARSEKNLR 524
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.140 0.444
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,008,768
Number of Sequences: 28952
Number of extensions: 170033
Number of successful extensions: 411
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 389
Number of HSP's gapped (non-prelim): 36
length of query: 153
length of database: 12,070,560
effective HSP length: 75
effective length of query: 78
effective length of database: 9,899,160
effective search space: 772134480
effective search space used: 772134480
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 55 (26.2 bits)
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