Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001026-TA|BGIBMGA001026-PA|IPR001320|Ionotropic
glutamate receptor
(496 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-16|AAO61447.1| 977|Caenorhabditis elegans Glutamate rece... 89 5e-18
U10438-15|AAA19090.3| 908|Caenorhabditis elegans Glutamate rece... 89 5e-18
AF318606-1|AAK01094.2| 977|Caenorhabditis elegans non-NMDA iono... 89 5e-18
U34661-1|AAA92006.1| 962|Caenorhabditis elegans ionotropic glut... 79 7e-15
L16559-2|AAA27933.3| 962|Caenorhabditis elegans Glutamate recep... 79 7e-15
AF318610-1|AAK01098.1| 396|Caenorhabditis elegans ionotropic gl... 75 1e-13
AC006637-5|AAM54176.2| 844|Caenorhabditis elegans Glutamate rec... 75 1e-13
U39849-10|AAA81054.3| 951|Caenorhabditis elegans Glutamate rece... 74 2e-13
AF318608-1|AAK01096.1| 409|Caenorhabditis elegans ionotropic gl... 74 2e-13
Z75545-5|CAA99883.3| 836|Caenorhabditis elegans Hypothetical pr... 67 3e-11
AF318607-1|AAK01095.1| 398|Caenorhabditis elegans ionotropic gl... 67 3e-11
U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate recep... 66 7e-11
AF318609-1|AAK01097.1| 425|Caenorhabditis elegans ionotropic gl... 66 7e-11
U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate recep... 64 2e-10
AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic gl... 64 2e-10
U51999-8|AAA96090.2| 465|Caenorhabditis elegans Glutamate recep... 64 3e-10
AF318611-1|AAK01099.1| 436|Caenorhabditis elegans ionotropic gl... 64 3e-10
AC006637-6|AAM54177.1| 328|Caenorhabditis elegans Glutamate rec... 55 1e-07
Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical p... 44 2e-04
AF318614-1|AAK01102.1| 433|Caenorhabditis elegans ionotropic gl... 44 2e-04
U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class glut... 42 0.001
AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type ion... 42 0.001
Z72502-3|CAA96588.1| 423|Caenorhabditis elegans Hypothetical pr... 36 0.050
Z81142-3|CAB03503.1| 583|Caenorhabditis elegans Hypothetical pr... 30 3.3
Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical p... 30 3.3
Z47812-6|CAC70105.1| 984|Caenorhabditis elegans Hypothetical pr... 30 3.3
Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical pr... 30 3.3
AF003386-7|AAB54258.2| 412|Caenorhabditis elegans Hypothetical ... 29 7.5
U53339-6|AAA96202.1| 348|Caenorhabditis elegans Serpentine rece... 29 10.0
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 29 10.0
>U10438-16|AAO61447.1| 977|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 2, isoform b protein.
Length = 977
Score = 89.4 bits (212), Expect = 5e-18
Identities = 95/419 (22%), Positives = 172/419 (41%), Gaps = 25/419 (5%)
Query: 19 ERDENGTVQAYGVAFKIIDILQQKFN-FTYEIVIPHRNFEIGGSKPE---DSLIGLTNTS 74
E + G + G ++++L + F Y++ I N + G + + D +IG
Sbjct: 509 EPELKGNDRFEGYCIDLLNLLAKNITGFEYDVFISDGN-KYGSRQADGSWDGMIGYLLNE 567
Query: 75 KVDMIAAFIPRLVRFRKLVTFSRD-LDEGVWMMMLRRPKESAAGSGLLAPFNNFVWYVTL 133
D+ A + + V FS+ + G+ +M+ + K+ + P +W TL
Sbjct: 568 TADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEFNIFSFMEPLGMTIWIFTL 627
Query: 134 ASVLCYGPCICFLT-----HVRSKLIKNE---ERPLRLSPSFWFVYSAFIKQSTNLAPEA 185
+S I ++ R + + E L S WF +AF++Q T++ P A
Sbjct: 628 SSYFGVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFTLYNSLWFTLAAFMQQGTDILPRA 687
Query: 186 NTTRVLFATWWLFIILLSAFYTANLTAFLTLSKFTLDIETPEDLYKKNYRWVSV-EGGSV 244
+ R+ + WW F +++ + YTANL AFLTL + T IE+ EDL +N V EGGS
Sbjct: 688 VSGRIASSCWWFFTLIIVSSYTANLAAFLTLERMTPPIESVEDLANQNKILYGVNEGGST 747
Query: 245 QYTVKTQDEDLY--YLNKMVTSGR----AEFRTLSPDQEYLPIVKAGAVLVKEMISLEHL 298
+ LY N MV++ + E ++++ V + A + E +
Sbjct: 748 AAFFEDSIVPLYKKMWNFMVSTTQKQIELEKQSITNSTSNRIFVSSYADGI-EKVRTSKG 806
Query: 299 MYGDYLTKTREGVEEAKR-CTYVVAPKPFMKKPRAFVYPVGSKLKSLFDPTLAYILQSGI 357
Y L +T E +R C + + +G+ L+ + + Y+ + G
Sbjct: 807 KYAFLLEETTNNYESGRRPCDTMKVGQNLNTLGYGIATKIGNPLRVSLNLAILYLSEKGE 866
Query: 358 IDYLEHKDLPSTTICPLDLQ--SKDRQLTNSHLMMTYYIMCVGLASGLAVFVVEILVKR 414
+ LE+K C L S + +YI+ G+ + +VE L ++
Sbjct: 867 LKKLENKWWYDRGQCDTGTSDGGTSSSLNLSKVAGIFYILLAGMVLSMCTALVEFLFRK 925
>U10438-15|AAA19090.3| 908|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 2, isoform a protein.
Length = 908
Score = 89.4 bits (212), Expect = 5e-18
Identities = 95/419 (22%), Positives = 172/419 (41%), Gaps = 25/419 (5%)
Query: 19 ERDENGTVQAYGVAFKIIDILQQKFN-FTYEIVIPHRNFEIGGSKPE---DSLIGLTNTS 74
E + G + G ++++L + F Y++ I N + G + + D +IG
Sbjct: 440 EPELKGNDRFEGYCIDLLNLLAKNITGFEYDVFISDGN-KYGSRQADGSWDGMIGYLLNE 498
Query: 75 KVDMIAAFIPRLVRFRKLVTFSRD-LDEGVWMMMLRRPKESAAGSGLLAPFNNFVWYVTL 133
D+ A + + V FS+ + G+ +M+ + K+ + P +W TL
Sbjct: 499 TADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEFNIFSFMEPLGMTIWIFTL 558
Query: 134 ASVLCYGPCICFLT-----HVRSKLIKNE---ERPLRLSPSFWFVYSAFIKQSTNLAPEA 185
+S I ++ R + + E L S WF +AF++Q T++ P A
Sbjct: 559 SSYFGVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFTLYNSLWFTLAAFMQQGTDILPRA 618
Query: 186 NTTRVLFATWWLFIILLSAFYTANLTAFLTLSKFTLDIETPEDLYKKNYRWVSV-EGGSV 244
+ R+ + WW F +++ + YTANL AFLTL + T IE+ EDL +N V EGGS
Sbjct: 619 VSGRIASSCWWFFTLIIVSSYTANLAAFLTLERMTPPIESVEDLANQNKILYGVNEGGST 678
Query: 245 QYTVKTQDEDLY--YLNKMVTSGR----AEFRTLSPDQEYLPIVKAGAVLVKEMISLEHL 298
+ LY N MV++ + E ++++ V + A + E +
Sbjct: 679 AAFFEDSIVPLYKKMWNFMVSTTQKQIELEKQSITNSTSNRIFVSSYADGI-EKVRTSKG 737
Query: 299 MYGDYLTKTREGVEEAKR-CTYVVAPKPFMKKPRAFVYPVGSKLKSLFDPTLAYILQSGI 357
Y L +T E +R C + + +G+ L+ + + Y+ + G
Sbjct: 738 KYAFLLEETTNNYESGRRPCDTMKVGQNLNTLGYGIATKIGNPLRVSLNLAILYLSEKGE 797
Query: 358 IDYLEHKDLPSTTICPLDLQ--SKDRQLTNSHLMMTYYIMCVGLASGLAVFVVEILVKR 414
+ LE+K C L S + +YI+ G+ + +VE L ++
Sbjct: 798 LKKLENKWWYDRGQCDTGTSDGGTSSSLNLSKVAGIFYILLAGMVLSMCTALVEFLFRK 856
>AF318606-1|AAK01094.2| 977|Caenorhabditis elegans non-NMDA
ionotropic glutamate receptorsubunit GLR-2 protein.
Length = 977
Score = 89.4 bits (212), Expect = 5e-18
Identities = 95/419 (22%), Positives = 172/419 (41%), Gaps = 25/419 (5%)
Query: 19 ERDENGTVQAYGVAFKIIDILQQKFN-FTYEIVIPHRNFEIGGSKPE---DSLIGLTNTS 74
E + G + G ++++L + F Y++ I N + G + + D +IG
Sbjct: 509 EPELKGNDRFEGYCIDLLNLLAKNITGFEYDVFISDGN-KYGSRQADGSWDGMIGYLLNE 567
Query: 75 KVDMIAAFIPRLVRFRKLVTFSRD-LDEGVWMMMLRRPKESAAGSGLLAPFNNFVWYVTL 133
D+ A + + V FS+ + G+ +M+ + K+ + P +W TL
Sbjct: 568 TADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEFNIFSFMEPLGMTIWIFTL 627
Query: 134 ASVLCYGPCICFLT-----HVRSKLIKNE---ERPLRLSPSFWFVYSAFIKQSTNLAPEA 185
+S I ++ R + + E L S WF +AF++Q T++ P A
Sbjct: 628 SSYFGVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFTLYNSLWFTLAAFMQQGTDILPRA 687
Query: 186 NTTRVLFATWWLFIILLSAFYTANLTAFLTLSKFTLDIETPEDLYKKNYRWVSV-EGGSV 244
+ R+ + WW F +++ + YTANL AFLTL + T IE+ EDL +N V EGGS
Sbjct: 688 VSGRIASSCWWFFTLIIVSSYTANLAAFLTLERMTPPIESVEDLANQNKILYGVNEGGST 747
Query: 245 QYTVKTQDEDLY--YLNKMVTSGR----AEFRTLSPDQEYLPIVKAGAVLVKEMISLEHL 298
+ LY N MV++ + E ++++ V + A + E +
Sbjct: 748 AAFFEDSIVPLYKKMWNFMVSTTQKQIELEKQSITNSTSNRIFVSSYADGI-EKVRTSKG 806
Query: 299 MYGDYLTKTREGVEEAKR-CTYVVAPKPFMKKPRAFVYPVGSKLKSLFDPTLAYILQSGI 357
Y L +T E +R C + + +G+ L+ + + Y+ + G
Sbjct: 807 KYAFLLEETTNNYESGRRPCDTMKVGQNLNTLGYGIATKIGNPLRVSLNLAILYLSEKGE 866
Query: 358 IDYLEHKDLPSTTICPLDLQ--SKDRQLTNSHLMMTYYIMCVGLASGLAVFVVEILVKR 414
+ LE+K C L S + +YI+ G+ + +VE L ++
Sbjct: 867 LKKLENKWWYDRGQCDTGTSDGGTSSSLNLSKVAGIFYILLAGMVLSMCTALVEFLFRK 925
>U34661-1|AAA92006.1| 962|Caenorhabditis elegans ionotropic
glutamate receptor subunitprotein.
Length = 962
Score = 79.0 bits (186), Expect = 7e-15
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 11/224 (4%)
Query: 30 GVAFKIIDILQQKFN-FTYEIVIPHRNFEIGGSKPEDSLIGLTNTSKVDMIAAFIPRLVR 88
G ++ +L K F YEI + + D +IG + + + A +
Sbjct: 494 GFCIDLLKLLADKIEEFNYEIKLGTKAGSKQADGSWDGMIGELLSGRAHAVVASLTINQE 553
Query: 89 FRKLVTFSRD-LDEGVWMMMLRRPKESAAGSGLLAPFNNFVWYVTLASVLCYGPCICFLT 147
++V FS+ + G+ +M+ + K+ + + P + +W + + + I ++
Sbjct: 554 RERVVDFSKPFMTTGISIMIKKPDKQEFSVFSFMQPLSTEIWMYIIFAYIGVSVVIFLVS 613
Query: 148 HVRSKLIKNEERP---LRLSPSF------WFVYSAFIKQSTNLAPEANTTRVLFATWWLF 198
+ EE +S F WF +AF++Q T++ P + + R+ + WW F
Sbjct: 614 RFSPYEWRVEETSRGGFTISNDFSVYNCLWFTLAAFMQQGTDILPRSISGRIASSAWWFF 673
Query: 199 IILLSAFYTANLTAFLTLSKFTLDIETPEDLYKKNYRWVSVEGG 242
+++ + YTANL AFLTL K IE+ EDL K++ ++GG
Sbjct: 674 TMIIVSSYTANLAAFLTLEKMQAPIESVEDLAKQSKIKYGIQGG 717
>L16559-2|AAA27933.3| 962|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 1 protein.
Length = 962
Score = 79.0 bits (186), Expect = 7e-15
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 11/224 (4%)
Query: 30 GVAFKIIDILQQKFN-FTYEIVIPHRNFEIGGSKPEDSLIGLTNTSKVDMIAAFIPRLVR 88
G ++ +L K F YEI + + D +IG + + + A +
Sbjct: 494 GFCIDLLKLLADKIEEFNYEIKLGTKAGSKQADGSWDGMIGELLSGRAHAVVASLTINQE 553
Query: 89 FRKLVTFSRD-LDEGVWMMMLRRPKESAAGSGLLAPFNNFVWYVTLASVLCYGPCICFLT 147
++V FS+ + G+ +M+ + K+ + + P + +W + + + I ++
Sbjct: 554 RERVVDFSKPFMTTGISIMIKKPDKQEFSVFSFMQPLSTEIWMYIIFAYIGVSVVIFLVS 613
Query: 148 HVRSKLIKNEERP---LRLSPSF------WFVYSAFIKQSTNLAPEANTTRVLFATWWLF 198
+ EE +S F WF +AF++Q T++ P + + R+ + WW F
Sbjct: 614 RFSPYEWRVEETSRGGFTISNDFSVYNCLWFTLAAFMQQGTDILPRSISGRIASSAWWFF 673
Query: 199 IILLSAFYTANLTAFLTLSKFTLDIETPEDLYKKNYRWVSVEGG 242
+++ + YTANL AFLTL K IE+ EDL K++ ++GG
Sbjct: 674 TMIIVSSYTANLAAFLTLEKMQAPIESVEDLAKQSKIKYGIQGG 717
>AF318610-1|AAK01098.1| 396|Caenorhabditis elegans ionotropic
glutamate receptor GLR-6 protein.
Length = 396
Score = 74.9 bits (176), Expect = 1e-13
Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 13/235 (5%)
Query: 23 NGTVQAYGVAFKIIDILQQK--FNFTYEIVIPHRNFEI-GGSKPEDSLIGLTNTSKVDMI 79
+G ++ G ++D L + FN+T +IV ++ E G+ D +IG DM
Sbjct: 17 DGRIKHEGFCVDLLDKLAEMLHFNYTLKIVKDNKYGERKNGTDEWDGMIGEILRGDADMA 76
Query: 80 AAFIPRLVRFRKLVTFSRD-LDEGVWMMMLR-RPKESAAGSGLLAPFNNFVW-YVTLASV 136
A I +++ F+ L G+ M+M + PK S++ + L P + VW + +A+V
Sbjct: 77 VAPITVTATRLEVIDFTDPFLQLGISMLMRQPNPKSSSSLTRFLWPLSASVWTFSAIATV 136
Query: 137 LCYGPCICFLTHVRSKLIKNEERP-LRLSPSFWFVYSAFIKQSTNLAPEANTTRVLFATW 195
+ L V + L E ++ S W++ ++ + +A TR++ A W
Sbjct: 137 IT-----ALLVTVAAVLSPKESTAEFKIQNSVWYLVCILLRAGSGYNCQAGATRLISAVW 191
Query: 196 WLFIILLSAFYTANLTAFLTLSKFTLDIETPEDL-YKKNYRWVSVEGGSVQYTVK 249
W F ++L A YTAN A LT+ + ++ + E+L + Y + S+ GGS K
Sbjct: 192 WSFTLVLIAQYTANFAALLTVDRKSMPFNSFEELGNQTEYNFGSILGGSTMQFFK 246
>AC006637-5|AAM54176.2| 844|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 6, isoform a protein.
Length = 844
Score = 74.9 bits (176), Expect = 1e-13
Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 13/235 (5%)
Query: 23 NGTVQAYGVAFKIIDILQQK--FNFTYEIVIPHRNFEI-GGSKPEDSLIGLTNTSKVDMI 79
+G ++ G ++D L + FN+T +IV ++ E G+ D +IG DM
Sbjct: 429 DGRIKHEGFCVDLLDKLAEMLHFNYTLKIVKDNKYGERKNGTDEWDGMIGEILRGDADMA 488
Query: 80 AAFIPRLVRFRKLVTFSRD-LDEGVWMMMLR-RPKESAAGSGLLAPFNNFVW-YVTLASV 136
A I +++ F+ L G+ M+M + PK S++ + L P + VW + +A+V
Sbjct: 489 VAPITVTATRLEVIDFTDPFLQLGISMLMRQPNPKSSSSLTRFLWPLSASVWTFSAIATV 548
Query: 137 LCYGPCICFLTHVRSKLIKNEERP-LRLSPSFWFVYSAFIKQSTNLAPEANTTRVLFATW 195
+ L V + L E ++ S W++ ++ + +A TR++ A W
Sbjct: 549 IT-----ALLVTVAAVLSPKESTAEFKIQNSVWYLVCILLRAGSGYNCQAGATRLISAVW 603
Query: 196 WLFIILLSAFYTANLTAFLTLSKFTLDIETPEDL-YKKNYRWVSVEGGSVQYTVK 249
W F ++L A YTAN A LT+ + ++ + E+L + Y + S+ GGS K
Sbjct: 604 WSFTLVLIAQYTANFAALLTVDRKSMPFNSFEELGNQTEYNFGSILGGSTMQFFK 658
>U39849-10|AAA81054.3| 951|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 4 protein.
Length = 951
Score = 74.1 bits (174), Expect = 2e-13
Identities = 86/402 (21%), Positives = 170/402 (42%), Gaps = 38/402 (9%)
Query: 22 ENGTVQAYGVAFKIIDILQQKFNFTYEIV-IPHRNFEIGGSKPE-DSLIGLTNTSKVDMI 79
+ G Q G +++ + Q F Y I+ + + I + +IG + D+
Sbjct: 423 KTGENQYEGFCIDLLNEMTQVLKFNYTIIEVQDGTYGIEDESGRWNGIIGALQRHEADLS 482
Query: 80 AAFIPRLVRFRKLVTFSRD-LDEGVWMMMLRRPKESAAGS--GLLAPFNNFVWYVTLAS- 135
+ + ++V F+ + G+ +++ R +E+ GS L P + VW L S
Sbjct: 483 LSAVTITYSRAEVVDFTLPFMHLGISILLARTSEETDKGSLWTFLEPLSLTVWISLLISY 542
Query: 136 -VLCYGPCIC--FLTHVRSKL----------IKNEERPLRLSPSFWFVYSAFIKQSTNLA 182
++ Y I F + L IKN++ + SFWF + ++Q +++
Sbjct: 543 CIVSYSMHILAKFSPYEWYNLERIDERDFENIKNQKNQFTVLNSFWFTMGSLMQQGSDVI 602
Query: 183 PEANTTRVLFATWWLFIILLSAFYTANLTAFLTLSKFTLDIETPEDL-YKKNYRWVSVEG 241
P A TR++ WW+F ++ + YTA L AFLT+ + + IE+ +DL ++ R+ ++
Sbjct: 603 PRAAATRLIAVVWWMFTQIIISSYTAQLAAFLTVERMSTPIESTQDLANQQKIRYGVLKS 662
Query: 242 GSVQYTVKTQDEDLYYLNKMVTSGRAEFRTLSPDQEYLPIVKAGA-VLVKEMISLEHLMY 300
GS + +Y V + ++ +E + VK+G + E LE+ +
Sbjct: 663 GSTMDFFRESKIPMYERMWSVMESSSPGVFVNSSREGIARVKSGGYAYMMESSMLEYYLE 722
Query: 301 GDYLTKTREGVEEAKRCTYVVAPKPFMKKPRAFVYPVGSKLKSLFDPTLAYILQSGIIDY 360
D ++ G+ ++K Y +A P GS L+ + T+ + + I++
Sbjct: 723 RDCELQSIGGLLDSK--GYGIA------------LPKGSPLRDILSRTVLQLQERTILEA 768
Query: 361 LEHK---DLPSTTICPLDLQSKDRQLTNSHLMMTYYIMCVGL 399
L++K D C K ++ +Y++ GL
Sbjct: 769 LKNKWWRDRREGPSCGPPPSEKATNSKPQNIFGIFYVLLTGL 810
>AF318608-1|AAK01096.1| 409|Caenorhabditis elegans ionotropic
glutamate receptor GLR-4 protein.
Length = 409
Score = 74.1 bits (174), Expect = 2e-13
Identities = 86/402 (21%), Positives = 170/402 (42%), Gaps = 38/402 (9%)
Query: 22 ENGTVQAYGVAFKIIDILQQKFNFTYEIV-IPHRNFEIGGSKPE-DSLIGLTNTSKVDMI 79
+ G Q G +++ + Q F Y I+ + + I + +IG + D+
Sbjct: 12 KTGENQYEGFCIDLLNEMTQVLKFNYTIIEVQDGTYGIEDESGRWNGIIGALQRHEADLS 71
Query: 80 AAFIPRLVRFRKLVTFSRD-LDEGVWMMMLRRPKESAAGS--GLLAPFNNFVWYVTLAS- 135
+ + ++V F+ + G+ +++ R +E+ GS L P + VW L S
Sbjct: 72 LSAVTITYSRAEVVDFTLPFMHLGISILLARTSEETDKGSLWTFLEPLSLTVWISLLISY 131
Query: 136 -VLCYGPCIC--FLTHVRSKL----------IKNEERPLRLSPSFWFVYSAFIKQSTNLA 182
++ Y I F + L IKN++ + SFWF + ++Q +++
Sbjct: 132 CIVSYSMHILAKFSPYEWYNLERIDERDFENIKNQKNQFTVLNSFWFTMGSLMQQGSDVI 191
Query: 183 PEANTTRVLFATWWLFIILLSAFYTANLTAFLTLSKFTLDIETPEDL-YKKNYRWVSVEG 241
P A TR++ WW+F ++ + YTA L AFLT+ + + IE+ +DL ++ R+ ++
Sbjct: 192 PRAAATRLIAVVWWMFTQIIISSYTAQLAAFLTVERMSTPIESTQDLANQQKIRYGVLKS 251
Query: 242 GSVQYTVKTQDEDLYYLNKMVTSGRAEFRTLSPDQEYLPIVKAGA-VLVKEMISLEHLMY 300
GS + +Y V + ++ +E + VK+G + E LE+ +
Sbjct: 252 GSTMDFFRESKIPMYERMWSVMESSSPGVFVNSSREGIARVKSGGYAYMMESSMLEYYLE 311
Query: 301 GDYLTKTREGVEEAKRCTYVVAPKPFMKKPRAFVYPVGSKLKSLFDPTLAYILQSGIIDY 360
D ++ G+ ++K Y +A P GS L+ + T+ + + I++
Sbjct: 312 RDCELQSIGGLLDSK--GYGIA------------LPKGSPLRDILSRTVLQLQERTILEA 357
Query: 361 LEHK---DLPSTTICPLDLQSKDRQLTNSHLMMTYYIMCVGL 399
L++K D C K ++ +Y++ GL
Sbjct: 358 LKNKWWRDRREGPSCGPPPSEKATNSKPQNIFGIFYVLLTGL 399
>Z75545-5|CAA99883.3| 836|Caenorhabditis elegans Hypothetical
protein K10D3.1 protein.
Length = 836
Score = 66.9 bits (156), Expect = 3e-11
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 15/220 (6%)
Query: 23 NGTVQAYGVAF--KIIDILQQKFNFTYEIVIPHRNFEIGGSKPEDSLIGLTNTSKVDMIA 80
NG+ + Y + KI +IL KF +T + V + + ++G D+
Sbjct: 419 NGSYEGYCIDLLHKIANIL--KFTYTIQKVRDNAYGSKESNGKWSGMVGELQRGDADLAV 476
Query: 81 AFIPRLVRFRKLVTFSRDLDEGVWMMMLRRPK-ESAAGSGLLAPFNNFVWYVTLASVLCY 139
A + +++ F+ ++ ++P+ + + P + VW +T AS
Sbjct: 477 ASLTISYGRSEVIDFTVPYMHLGISILFKKPRIRDSDWFKFMDPLSTQVWIMTFASYFVV 536
Query: 140 GPCICFLTHVR--SKLIKNEE----RPL----RLSPSFWFVYSAFIKQSTNLAPEANTTR 189
I + + + ++E+ +P+ L SFWF + ++Q + L P A +TR
Sbjct: 537 SVAIWIIAKISPYEQFERDEDNGQYKPVDNQFSLRNSFWFTVCSLMQQGSELCPRAASTR 596
Query: 190 VLFATWWLFIILLSAFYTANLTAFLTLSKFTLDIETPEDL 229
+L WW F ++L + YTANL A LT + IE +DL
Sbjct: 597 LLTGIWWFFALILISSYTANLAAVLTTRRMETPIENADDL 636
>AF318607-1|AAK01095.1| 398|Caenorhabditis elegans ionotropic
glutamate receptor GLR-3 protein.
Length = 398
Score = 66.9 bits (156), Expect = 3e-11
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 15/220 (6%)
Query: 23 NGTVQAYGVAF--KIIDILQQKFNFTYEIVIPHRNFEIGGSKPEDSLIGLTNTSKVDMIA 80
NG+ + Y + KI +IL KF +T + V + + ++G D+
Sbjct: 15 NGSYEGYCIDLLHKIANIL--KFTYTIQKVRDNAYGSKESNGKWSGMVGELQRGDADLAV 72
Query: 81 AFIPRLVRFRKLVTFSRDLDEGVWMMMLRRPK-ESAAGSGLLAPFNNFVWYVTLASVLCY 139
A + +++ F+ ++ ++P+ + + P + VW +T AS
Sbjct: 73 ASLTISYGRSEVIDFTVPYMHLGISILFKKPRIRDSDWFKFMDPLSTQVWIMTFASYFVV 132
Query: 140 GPCICFLTHVR--SKLIKNEE----RPL----RLSPSFWFVYSAFIKQSTNLAPEANTTR 189
I + + + ++E+ +P+ L SFWF + ++Q + L P A +TR
Sbjct: 133 SVAIWIIAKISPYEQFERDEDNGQYKPVDNQFSLRNSFWFTVCSLMQQGSELCPRAASTR 192
Query: 190 VLFATWWLFIILLSAFYTANLTAFLTLSKFTLDIETPEDL 229
+L WW F ++L + YTANL A LT + IE +DL
Sbjct: 193 LLTGIWWFFALILISSYTANLAAVLTTRRMETPIENADDL 232
>U97007-1|AAB52291.1| 932|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 5 protein.
Length = 932
Score = 65.7 bits (153), Expect = 7e-11
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 137 LCYGPCICFLTHVRSKLIKNEERPLRLSPSF------WFVYSAFIKQSTNLAPEANTTRV 190
L + C H + N+E P+ +S ++ W+V S +K + P A +TR+
Sbjct: 597 LNFSCCTAHEPHPAAAFATNQEAPIVMSNNYSFWNTVWYVLSTMLKGGCDFGPRAVSTRL 656
Query: 191 LFATWWLFIILLSAFYTANLTAFLTLSKFTLDIETPEDLYKK-NYRWVSVEGGS 243
L TWW+F +++ + YTANL A LT+S+ + I+ +DL + + ++ GGS
Sbjct: 657 LGGTWWVFYLVIISAYTANLAAVLTVSRPYIPIKNLDDLANQTTISYGTIRGGS 710
>AF318609-1|AAK01097.1| 425|Caenorhabditis elegans ionotropic
glutamate receptor GLR-5 protein.
Length = 425
Score = 65.7 bits (153), Expect = 7e-11
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
Query: 137 LCYGPCICFLTHVRSKLIKNEERPLRLSPSF------WFVYSAFIKQSTNLAPEANTTRV 190
L + C H + N+E P+ +S ++ W+V S +K + P A +TR+
Sbjct: 157 LNFSCCTAHEPHPAAAFATNQEAPIVMSNNYSFWNTVWYVLSTMLKGGCDFGPRAVSTRL 216
Query: 191 LFATWWLFIILLSAFYTANLTAFLTLSKFTLDIETPEDLYKK-NYRWVSVEGGS 243
L TWW+F +++ + YTANL A LT+S+ + I+ +DL + + ++ GGS
Sbjct: 217 LGGTWWVFYLVIISAYTANLAAVLTVSRPYIPIKNLDDLANQTTISYGTIRGGS 270
>U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 8 protein.
Length = 489
Score = 64.1 bits (149), Expect = 2e-10
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 106 MMLRRPKESAAGSGLLA--PFNNFVWYVTLASVLCYGPCICFLTHVRSKLIKNEERPLRL 163
+M+R P++ + L+ PF+ VW +T A +L G +T++ K+ EE +
Sbjct: 113 IMIRSPEKYEDDTLLIVTEPFSWEVWVITAAVILISGVIFLVMTNIIRKVY--EEMTVTP 170
Query: 164 SPSFWFVYSAFIKQSTNLAPEANTTRVLFATWWLFIILLSAFYTANLTAFLTLSKFTLDI 223
S W +S F++Q P + + RVL A WWL I LSA +T +L A + K +
Sbjct: 171 FESIWVFFSIFVQQGLPEQPRSWSCRVLVALWWLASITLSATFTGSLVALFAVDKTNVPF 230
Query: 224 ETPEDLYK 231
+ + L +
Sbjct: 231 QNIDQLVR 238
>AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic
glutamate receptor GLR-8 protein.
Length = 406
Score = 64.1 bits (149), Expect = 2e-10
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 106 MMLRRPKESAAGSGLLA--PFNNFVWYVTLASVLCYGPCICFLTHVRSKLIKNEERPLRL 163
+M+R P++ + L+ PF+ VW +T A +L G +T++ K+ EE +
Sbjct: 105 IMIRSPEKYEDDTLLIVTEPFSWEVWVITAAVILISGVIFLVMTNIIRKVY--EEMTVTP 162
Query: 164 SPSFWFVYSAFIKQSTNLAPEANTTRVLFATWWLFIILLSAFYTANLTAFLTLSKFTLDI 223
S W +S F++Q P + + RVL A WWL I LSA +T +L A + K +
Sbjct: 163 FESIWVFFSIFVQQGLPEQPRSWSCRVLVALWWLASITLSATFTGSLVALFAVDKTNVPF 222
Query: 224 ETPEDLYK 231
+ + L +
Sbjct: 223 QNIDQLVR 230
>U51999-8|AAA96090.2| 465|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 7 protein.
Length = 465
Score = 63.7 bits (148), Expect = 3e-10
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 157 EERPLRLSPSFWFVYSAFIKQSTNLAPEANTTRVLFATWWLFIILLSAFYTANLTAFLTL 216
E+R L WF ++ Q AP+ + R++ ATWWLF ++ A YTANL AFLT+
Sbjct: 177 EKRQFSLKECLWFCMTSLTPQGGGEAPKNISGRLVAATWWLFGFIIIASYTANLAAFLTV 236
Query: 217 SKFTLDIETPEDL---YKKNYRWVSVEGGSVQYTVKTQDEDLYY 257
S+ I + +DL YK Y + + + E+ +Y
Sbjct: 237 SRLEQPISSLDDLAKQYKIEYAPIKGSASETYFRRMAEIEETFY 280
>AF318611-1|AAK01099.1| 436|Caenorhabditis elegans ionotropic
glutamate receptor GLR-7 protein.
Length = 436
Score = 63.7 bits (148), Expect = 3e-10
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 157 EERPLRLSPSFWFVYSAFIKQSTNLAPEANTTRVLFATWWLFIILLSAFYTANLTAFLTL 216
E+R L WF ++ Q AP+ + R++ ATWWLF ++ A YTANL AFLT+
Sbjct: 161 EKRQFSLKECLWFCMTSLTPQGGGEAPKNISGRLVAATWWLFGFIIIASYTANLAAFLTV 220
Query: 217 SKFTLDIETPEDL---YKKNYRWVSVEGGSVQYTVKTQDEDLYY 257
S+ I + +DL YK Y + + + E+ +Y
Sbjct: 221 SRLEQPISSLDDLAKQYKIEYAPIKGSASETYFRRMAEIEETFY 264
>AC006637-6|AAM54177.1| 328|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 6, isoform b protein.
Length = 328
Score = 55.2 bits (127), Expect = 1e-07
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 155 KNEERPLRLSPSFWFVYSAFIKQSTNLAPEANTTRVLFATWWLFIILLSAFYTANLTAFL 214
K ++ S W++ ++ + +A TR++ A WW F ++L A YTAN A L
Sbjct: 47 KESTAEFKIQNSVWYLVCILLRAGSGYNCQAGATRLISAVWWSFTLVLIAQYTANFAALL 106
Query: 215 TLSKFTLDIETPEDL-YKKNYRWVSVEGGSVQYTVK 249
T+ + ++ + E+L + Y + S+ GGS K
Sbjct: 107 TVDRKSMPFNSFEELGNQTEYNFGSILGGSTMQFFK 142
>Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 44.0 bits (99), Expect = 2e-04
Identities = 53/237 (22%), Positives = 91/237 (38%), Gaps = 19/237 (8%)
Query: 30 GVAFKIIDILQQKFNFTYEIV-IPHRNFEIGGSKPEDSLIGLTNTSKVDMIAAFIPRLVR 88
G +++ L FTY + + + + + LI +K DM +
Sbjct: 348 GYCVDLLNKLANDIGFTYTLYKVRDEKWGLKTENGWNGLIADLMHNKADMCVTSLKLNSE 407
Query: 89 FRKLVTFSRD-LDEGVWMMMLRRPKESAAGSGLLAPFNNFVWYVTLASVLCYGPCICFLT 147
+ + FS LD G+ +++ R + + L PF W + L + FL
Sbjct: 408 RARDIDFSLPFLDTGISIIVKIR-SGVLSPTAFLEPFEYSTWVIILFVCIHVAAISIFLF 466
Query: 148 HVRSKLIKN------EERPLRLSPSFWFVYSAFIKQSTNL-APEANTTRVLFATWWLFII 200
S N E L S+W V++ S + P++ +R++ W F +
Sbjct: 467 EWVSPYSFNMQKYPPPEHKFSLFRSYWLVWATLFSASVSTDVPKSTVSRLMALVWAAFGL 526
Query: 201 LLSAFYTANLTAFLTLSKFTLD--------IETPEDLYKKNYRWVSVEGGSVQYTVK 249
A YTANL AF+ D + P D K +R+ +V+GG+ T+K
Sbjct: 527 TFLAVYTANLAAFMITRVQYYDLSGIHDPMLNFPHD-QKPPFRFGTVDGGNTHETMK 582
>Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 44.0 bits (99), Expect = 2e-04
Identities = 53/237 (22%), Positives = 91/237 (38%), Gaps = 19/237 (8%)
Query: 30 GVAFKIIDILQQKFNFTYEIV-IPHRNFEIGGSKPEDSLIGLTNTSKVDMIAAFIPRLVR 88
G +++ L FTY + + + + + LI +K DM +
Sbjct: 348 GYCVDLLNKLANDIGFTYTLYKVRDEKWGLKTENGWNGLIADLMHNKADMCVTSLKLNSE 407
Query: 89 FRKLVTFSRD-LDEGVWMMMLRRPKESAAGSGLLAPFNNFVWYVTLASVLCYGPCICFLT 147
+ + FS LD G+ +++ R + + L PF W + L + FL
Sbjct: 408 RARDIDFSLPFLDTGISIIVKIR-SGVLSPTAFLEPFEYSTWVIILFVCIHVAAISIFLF 466
Query: 148 HVRSKLIKN------EERPLRLSPSFWFVYSAFIKQSTNL-APEANTTRVLFATWWLFII 200
S N E L S+W V++ S + P++ +R++ W F +
Sbjct: 467 EWVSPYSFNMQKYPPPEHKFSLFRSYWLVWATLFSASVSTDVPKSTVSRLMALVWAAFGL 526
Query: 201 LLSAFYTANLTAFLTLSKFTLD--------IETPEDLYKKNYRWVSVEGGSVQYTVK 249
A YTANL AF+ D + P D K +R+ +V+GG+ T+K
Sbjct: 527 TFLAVYTANLAAFMITRVQYYDLSGIHDPMLNFPHD-QKPPFRFGTVDGGNTHETMK 582
>AF318614-1|AAK01102.1| 433|Caenorhabditis elegans ionotropic
glutamate receptor NMR-2 protein.
Length = 433
Score = 44.0 bits (99), Expect = 2e-04
Identities = 53/237 (22%), Positives = 91/237 (38%), Gaps = 19/237 (8%)
Query: 30 GVAFKIIDILQQKFNFTYEIV-IPHRNFEIGGSKPEDSLIGLTNTSKVDMIAAFIPRLVR 88
G +++ L FTY + + + + + LI +K DM +
Sbjct: 55 GYCVDLLNKLANDIGFTYTLYKVRDEKWGLKTENGWNGLIADLMHNKADMCVTSLKLNSE 114
Query: 89 FRKLVTFSRD-LDEGVWMMMLRRPKESAAGSGLLAPFNNFVWYVTLASVLCYGPCICFLT 147
+ + FS LD G+ +++ R + + L PF W + L + FL
Sbjct: 115 RARDIDFSLPFLDTGISIIVKIR-SGVLSPTAFLEPFEYSTWVIILFVCIHVAAISIFLF 173
Query: 148 HVRSKLIKN------EERPLRLSPSFWFVYSAFIKQSTNL-APEANTTRVLFATWWLFII 200
S N E L S+W V++ S + P++ +R++ W F +
Sbjct: 174 EWVSPYSFNMQKYPPPEHKFSLFRSYWLVWATLFSASVSTDVPKSTVSRLMALVWAAFGL 233
Query: 201 LLSAFYTANLTAFLTLSKFTLD--------IETPEDLYKKNYRWVSVEGGSVQYTVK 249
A YTANL AF+ D + P D K +R+ +V+GG+ T+K
Sbjct: 234 TFLAVYTANLAAFMITRVQYYDLSGIHDPMLNFPHD-QKPPFRFGTVDGGNTHETMK 289
>U23486-8|AAC46779.3| 1025|Caenorhabditis elegans Nmda class
glutamate receptor protein1 protein.
Length = 1025
Score = 41.9 bits (94), Expect = 0.001
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 155 KNEERPLRLSPSFWFVYSAFIKQSTN-LAPEANTTRVLFATWWLFIILLSAFYTANLTAF 213
K+ + + + WFV+ + + P + + RVL W F +++ A YTANL AF
Sbjct: 616 KDADENVNFGEAMWFVWGVLLNSGVSEKTPRSCSARVLGIVWCGFCMIMVASYTANLAAF 675
Query: 214 LTLSK 218
L L +
Sbjct: 676 LVLDQ 680
>AF318613-1|AAK01101.2| 1025|Caenorhabditis elegans NMDA-type
ionotropic glutamatereceptor NMR-1 protein.
Length = 1025
Score = 41.9 bits (94), Expect = 0.001
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 155 KNEERPLRLSPSFWFVYSAFIKQSTN-LAPEANTTRVLFATWWLFIILLSAFYTANLTAF 213
K+ + + + WFV+ + + P + + RVL W F +++ A YTANL AF
Sbjct: 616 KDADENVNFGEAMWFVWGVLLNSGVSEKTPRSCSARVLGIVWCGFCMIMVASYTANLAAF 675
Query: 214 LTLSK 218
L L +
Sbjct: 676 LVLDQ 680
>Z72502-3|CAA96588.1| 423|Caenorhabditis elegans Hypothetical
protein C08B6.5 protein.
Length = 423
Score = 36.3 bits (80), Expect = 0.050
Identities = 23/115 (20%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 30 GVAFKIIDILQQKFNFTYEIVIPHRNFEI----GGSKPEDS---LIGLTNTSKVDMIAAF 82
G +II ++ Q ++ +E++ + F + G +P+ + ++GL K+DM
Sbjct: 10 GAEIEIISMVMQILDWQWEVIDTEKEFNVVNDFGNPQPDGNFSGIMGLLAQDKIDMSGLS 69
Query: 83 IPRLVRFRKLVTFSRDLDEGVWMMMLRRPKESAAGSGLLAPFNNFVWYVTLASVL 137
+ + F+ + + +++RP E+ + + APF +W + LA+++
Sbjct: 70 MRITPARMEFAHFTFPIRYFQQVYIIKRPAENDFRNFVFAPFTTDMWLLLLATIM 124
>Z81142-3|CAB03503.1| 583|Caenorhabditis elegans Hypothetical
protein ZK1037.4 protein.
Length = 583
Score = 30.3 bits (65), Expect = 3.3
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 58 IGGSKPEDSLIGLTNTSKVDMIAAFIPRLVRFRKLVTFSRDLDEGVWMMMLRRPKESAAG 117
I + P ++ LT++ K +++ F V + +++ DEGVW++ G
Sbjct: 478 ISWANPFEAFKNLTDSEKAAVMSEFGVAFVLIEQAFKSAKEADEGVWLLQNNTFLGLKEG 537
Query: 118 SGLLAPFNNFVWYVTLASVLC 138
+ A N+ + TL LC
Sbjct: 538 ESVQAKINS-EFVKTLLKTLC 557
>Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical
protein T05H10.5c protein.
Length = 979
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 214 LTLSKFTLDIETPEDLYKK-NYRWVSVEGGSVQYTVKTQDEDLYYLNKMVTSGR 266
+ + KF D E D Y+K N R G++QY ++ +ED++Y K + R
Sbjct: 647 MCMIKFYSDFEDNGDFYEKFNVR------GNIQYMLEKMEEDMFYKGKFMDMAR 694
>Z47812-6|CAC70105.1| 984|Caenorhabditis elegans Hypothetical
protein T05H10.5b protein.
Length = 984
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 214 LTLSKFTLDIETPEDLYKK-NYRWVSVEGGSVQYTVKTQDEDLYYLNKMVTSGR 266
+ + KF D E D Y+K N R G++QY ++ +ED++Y K + R
Sbjct: 652 MCMIKFYSDFEDNGDFYEKFNVR------GNIQYMLEKMEEDMFYKGKFMDMAR 699
>Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical
protein T05H10.5a protein.
Length = 980
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 214 LTLSKFTLDIETPEDLYKK-NYRWVSVEGGSVQYTVKTQDEDLYYLNKMVTSGR 266
+ + KF D E D Y+K N R G++QY ++ +ED++Y K + R
Sbjct: 648 MCMIKFYSDFEDNGDFYEKFNVR------GNIQYMLEKMEEDMFYKGKFMDMAR 695
>AF003386-7|AAB54258.2| 412|Caenorhabditis elegans Hypothetical
protein F59E12.8 protein.
Length = 412
Score = 29.1 bits (62), Expect = 7.5
Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 5/156 (3%)
Query: 67 LIGLTNTSKVDMIAAFIPRLVRFRKLVTFSRDLDEGV-WMMMLRRPKESAAGSGLLAPFN 125
++G ++DM ++TF+ V + ++ P++S L PF+
Sbjct: 1 MLGDIQKGRIDMACGRFRMTADRANVLTFTYPTQFEVNQVYLITDPQKSVDVVFLFHPFS 60
Query: 126 NFVWYVTLASVLCYGPCICFLTHVRSKLIKNEERPLR-LSPSFWFVYSAFIKQSTNLAPE 184
VW + +VL L V K K E + S + V + +A +
Sbjct: 61 TTVWLLLSLTVLVVAIVFFILRFVEFKSTKETESSYECIQNSIFQVLLSTFNLEIRVAKK 120
Query: 185 ANTTRV-LFATWWL--FIILLSAFYTANLTAFLTLS 217
+ LF+T WL + + FYT+ L+ + +S
Sbjct: 121 STFFAFHLFSTIWLLAWFHVFIDFYTSELSGMMVVS 156
>U53339-6|AAA96202.1| 348|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 12 protein.
Length = 348
Score = 28.7 bits (61), Expect = 10.0
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 124 FNNFVWYVTLASVLCYGPCICFLTHVRSKLIKNEERPLRLSPSFWFVYSAFIKQSTNLAP 183
FN+F+WY+ + + C L + K++ R +S S + I QS+
Sbjct: 186 FNSFLWYMLYLKITNF-ICNLILLFIH-KILHQRYRRKNVSLSVKYEMQE-ISQSSRFTL 242
Query: 184 EANTTRVLFATWWLFIILL 202
T +LF W++ ILL
Sbjct: 243 IVTFTHLLFFGWYVSTILL 261
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 438 PRYDDSGPPPYESLFVKPKFKDSEKRWK-MINGRE 471
PR+ DS +E L KPKF+ + K+ K + N R+
Sbjct: 3576 PRFTDSSSTKHELLRNKPKFETTRKKLKRLANNRQ 3610
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.138 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,255,986
Number of Sequences: 27539
Number of extensions: 508334
Number of successful extensions: 1053
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1020
Number of HSP's gapped (non-prelim): 40
length of query: 496
length of database: 12,573,161
effective HSP length: 84
effective length of query: 412
effective length of database: 10,259,885
effective search space: 4227072620
effective search space used: 4227072620
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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