Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001024-TA|BGIBMGA001024-PA|IPR013026|Tetratricopeptide
region, IPR008940|Protein prenyltransferase, IPR013618|Domain of
unknown function DUF1736, IPR001440|Tetratricopeptide TPR_1,
IPR013105|Tetratricopeptide TPR_2
(744 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 48 5e-06
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 46 1e-05
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 42 2e-04
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 40 0.001
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 40 0.002
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 39 0.002
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 38 0.005
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 36 0.015
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 35 0.036
SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces ... 35 0.047
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 34 0.062
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ... 33 0.19
SPAC6F12.15c |cut9|dre1|anaphase-promoting complex subunit Cut9|... 30 1.3
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 29 1.8
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 29 1.8
SPAC13G6.08 |||Cdc20/Fizzy family WD repeat protein|Schizosaccha... 29 3.1
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 29 3.1
SPBC24C6.05 |sec28||coatomer epsilon subunit |Schizosaccharomyce... 28 4.1
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 28 5.4
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory... 27 7.1
SPBC336.04 |cdc6|pol3, pold, mis10|DNA polymerase delta catalyti... 27 7.1
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 27 7.1
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 27 7.1
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 48.0 bits (109), Expect = 5e-06
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 18/187 (9%)
Query: 332 KLYNNVGHALEAEGKYSEALDFFNTAVSVQPDDVGAHINVGRTYNHLGRYQEAEDAYVKA 391
++Y +G + + K++++L+ F + P + V Y +G E Y A
Sbjct: 476 EIYFRLGIIYKQQHKFAQSLELFRHILDNPPKP----LTVLDIYFQIGHVYEQRKEYKLA 531
Query: 392 KSLLPKAKPGESYQARIA--PNHLNVFLNLANLISKNATRLEEADMLYRQAI-SMRADYT 448
K E+Y+ +A PNH V L L + ++ D+ + S+ AD T
Sbjct: 532 K---------EAYERVLAETPNHAKVLQQLGWLCHQQSSSFTNQDLAIQYLTKSLEADDT 582
Query: 449 --QAYINRGDILIKLNRTKEAQEVYERALLYDSGNPDIYYNLGVVLLEQGKASQALAYLD 506
Q++ G + + +A E Y++A+ D NP + ++GV+ + + AL
Sbjct: 583 DAQSWYLIGRCYVAQQKYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDALDAYS 642
Query: 507 KALELEP 513
+A+ L P
Sbjct: 643 RAIRLNP 649
Score = 39.9 bits (89), Expect = 0.001
Identities = 65/346 (18%), Positives = 133/346 (38%), Gaps = 22/346 (6%)
Query: 318 SIFASGLKVNRFNAKLYNNVGHALEAEGKYSEALDFFNTAVSVQPDDVGAHINVGRTYNH 377
S + S L+ N ++ + L ++ A++++ T + P G ++
Sbjct: 355 SAYESALRQNPYSIPAMLQIATILRNREQFPLAIEYYQTILDCDPKQ-------GEIWSA 407
Query: 378 LGRYQEAEDAYVKAKSLLPKAKPGESYQARIAPNHLNVFLNLANLISKNATRLEEADMLY 437
LG +D +A S +A Y + P ++ + L + + E A+ +
Sbjct: 408 LGHCYLMQDDLSRAYSAYRQAL----YHLK-DPKDPKLWYGIGILYDRYGSH-EHAEEAF 461
Query: 438 RQAISMRADY---TQAYINRGDILIKLNRTKEAQEVYERALLYDSGNP----DIYYNLGV 490
Q + M ++ + Y G I + ++ ++ E++ R +L + P DIY+ +G
Sbjct: 462 MQCLRMDPNFEKVNEIYFRLGIIYKQQHKFAQSLELF-RHILDNPPKPLTVLDIYFQIGH 520
Query: 491 VLLEQGKASQALAYLDKALELEPEHEQALLNSAILL-QELGAADLRHLARQRLLKLLDKD 549
V ++ + A ++ L P H + L L Q+ + + LA Q L K L+ D
Sbjct: 521 VYEQRKEYKLAKEAYERVLAETPNHAKVLQQLGWLCHQQSSSFTNQDLAIQYLTKSLEAD 580
Query: 550 ATNERVHFNLGMVCMDEGDAECAERWFRAAVHLKPDFXXXXXXXXXXXXXXXXXXXXXPF 609
T+ + + +G + + A ++ AV+
Sbjct: 581 DTDAQSWYLIGRCYVAQQKYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDALDA 640
Query: 610 LKQLVRHHPDHVKALVLLGDIYINSVKDLDAAESCYRRILELEPDN 655
+ +R +P + LG +Y + + A Y+R EL+P N
Sbjct: 641 YSRAIRLNPYISEVWYDLGTLYESCHNQISDALDAYQRAAELDPTN 686
Score = 28.3 bits (60), Expect = 4.1
Identities = 47/246 (19%), Positives = 97/246 (39%), Gaps = 22/246 (8%)
Query: 330 NAKLYNNVGHALEAEGKYSEALDFFNTAVSVQPDDVGAHINVGRTYNHLGRYQEAEDAYV 389
N + + +G E +AL + +A+ P + A + + + ++ A + Y
Sbjct: 333 NEETWIQIGRLAELFDDQDKALSAYESALRQNPYSIPAMLQIATILRNREQFPLAIEYYQ 392
Query: 390 KAKSLLPKAKPGESYQARIAPNHLNVFLNLANLISKNATRLEEADMLYRQAISMRADYT- 448
PK GE + A L L+ + +R A YRQA+ D
Sbjct: 393 TILDCDPKQ--GEIWSA----------LGHCYLMQDDLSRAYSA---YRQALYHLKDPKD 437
Query: 449 -QAYINRGDILIKLNRTKEAQEVYERALLYDSGNP---DIYYNLGVVLLEQGKASQALAY 504
+ + G + + + A+E + + L D +IY+ LG++ +Q K +Q+L
Sbjct: 438 PKLWYGIGILYDRYGSHEHAEEAFMQCLRMDPNFEKVNEIYFRLGIIYKQQHKFAQSLEL 497
Query: 505 LDKALELEPEHEQALLNSAILLQELGAADLRH-LARQRLLKLLDKDATNERVHFNLGMVC 563
L+ P +L+ + + + LA++ ++L + + +V LG +C
Sbjct: 498 FRHILD-NPPKPLTVLDIYFQIGHVYEQRKEYKLAKEAYERVLAETPNHAKVLQQLGWLC 556
Query: 564 MDEGDA 569
+ +
Sbjct: 557 HQQSSS 562
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 46.4 bits (105), Expect = 1e-05
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 7/183 (3%)
Query: 337 VGHALEAEGKYSEALDFFNTAVSVQPDDVGA--HINVGRTYNHLGRYQEAEDAYVKAKSL 394
+G+A E KY+EA+ + A+ + D A + N TY +G ++ A ++ +
Sbjct: 29 IGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYMQIGEFELALCDAKQSDRI 88
Query: 395 LPKAKPGESYQARIAPNHLNVFLNLANLISKN---ATRLEEADMLYRQAISMRADYTQAY 451
P P + R A L++ LN A + KN L D L R+ S
Sbjct: 89 KPDV-PKTQSRIRQAYEGLSI-LNEAEVYLKNKQAGLALNALDRLQRRIDSTTQPPMSWM 146
Query: 452 INRGDILIKLNRTKEAQEVYERALLYDSGNPDIYYNLGVVLLEQGKASQALAYLDKALEL 511
+ + I N AQ++ L + N + G V+ G+ ++A+ + +AL+L
Sbjct: 147 YLKAQVYIFQNDMDRAQKIAHDVLRLNPKNVEALVLRGKVMYYSGENAKAITHFQEALKL 206
Query: 512 EPE 514
+P+
Sbjct: 207 DPD 209
Score = 34.3 bits (75), Expect = 0.062
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 453 NRGDILIKLNRTKEAQEVYERALLYDSGNPD----IYYNLGVVLLEQGKASQALAYLDKA 508
N+G+ L + ++A E Y AL D N + +Y N VLL + +AL+ D A
Sbjct: 228 NQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEALSDSDNA 287
Query: 509 LELEPEHEQAL 519
L ++ + + L
Sbjct: 288 LAIDSSYLKGL 298
Score = 27.1 bits (57), Expect = 9.4
Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 23/189 (12%)
Query: 324 LKVNRFNAKLYNNVGHALEAEGKYSEALDFFNTAVSVQPDDVGAHI------------NV 371
L++N N + G + G+ ++A+ F A+ + PD A N
Sbjct: 170 LRLNPKNVEALVLRGKVMYYSGENAKAITHFQEALKLDPDCTTAKTLFKQVRKLENTKNQ 229
Query: 372 GRTYNHLGRYQEAEDAYVKAKSLLPKAKPGESYQARIAPNHLNVFLNLANLISKNATRLE 431
G G YQ+A + Y +A + P K A++ N V L L R E
Sbjct: 230 GNDLFRQGNYQDAYEKYSEALQIDPDNK---ETVAKLYMNRATVLLRL--------KRPE 278
Query: 432 EADMLYRQAISMRADYTQAYINRGDILIKLNRTKEAQEVYERALLYDSGNPDIYYNLGVV 491
EA A+++ + Y + R L + +EA + A+ D+ + ++ L +
Sbjct: 279 EALSDSDNALAIDSSYLKGLKVRAKAHEALEKWEEAVRDVQSAIELDASDANLRQELRRL 338
Query: 492 LLEQGKASQ 500
LE K+ +
Sbjct: 339 QLELKKSKR 347
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 42.3 bits (95), Expect = 2e-04
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 431 EEADMLYRQAISMRADYTQAYINRGDILIKLNRTKEAQEVYERALLYDSGNPDIYYNLGV 490
E++ +R+AI + + A+ G + +K R +A ++RA + N + +G+
Sbjct: 482 EKSKTSFRKAIRVNVRHYNAWYGLGMVYLKTGRNDQADFHFQRAAEINPNNSVLITCIGM 541
Query: 491 VLLEQGKASQALAYLDKALELEPEHEQALLNSAILLQELGAADLRHLARQRLLKLLDKDA 550
+ +AL + D+A +L+ + A A +L L D + L LK + D
Sbjct: 542 IYERCKDYKKALDFYDRACKLDEKSSLARFKKAKVLILLHDHD-KALVELEQLKAIAPDE 600
Query: 551 TNERVHFNLGMVCMDEGDAECAERWFRAAVHL 582
N VHF LG + A + F A +L
Sbjct: 601 AN--VHFLLGKIFKQMRKKNLALKHFTIAWNL 630
Score = 39.1 bits (87), Expect = 0.002
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 26/206 (12%)
Query: 332 KLYNNVGHALEAEGKYSEALDFFNTAVSVQPDDVGAHINVGRTYNHLGRYQEAEDAYVKA 391
KL+ G L A+ K EAL+ F + Q + +G TY L Y+++E+ + K
Sbjct: 331 KLFGK-GVYLLAQYKLREALNCFQSLPIEQQNTPFVLAKLGITYFELVDYEKSEEVFQKL 389
Query: 392 KSLLP-KAKPGESYQARIAPNHLNVFLN-LANLISKNATRLEEADMLYRQAISMRADYTQ 449
+ L P + K E + + +V L+ LA+ + E+ + S++ +++Q
Sbjct: 390 RDLSPSRVKDMEVFSTALWHLQKSVPLSYLAHETLETNPYSPESWCILANCFSLQREHSQ 449
Query: 450 AY--INRGDILIKLNRTKE-----------AQEVYER-------ALLYDSGNPDIYYNLG 489
A INR I+L+ T E A E YE+ A+ + + + +Y LG
Sbjct: 450 ALKCINRA---IQLDPTFEYAYTLQGHEHSANEEYEKSKTSFRKAIRVNVRHYNAWYGLG 506
Query: 490 VVLLEQGKASQALAYLDKALELEPEH 515
+V L+ G+ QA + +A E+ P +
Sbjct: 507 MVYLKTGRNDQADFHFQRAAEINPNN 532
Score = 37.5 bits (83), Expect = 0.007
Identities = 40/191 (20%), Positives = 79/191 (41%), Gaps = 15/191 (7%)
Query: 324 LKVNRFNAKLYNNVGHALEAEGKYSEALDFFNTAVSVQPDDVGAHINVGRTYNHLGRYQE 383
L+ N ++ + + + + + ++S+AL N A+ + P A Y G
Sbjct: 424 LETNPYSPESWCILANCFSLQREHSQALKCINRAIQLDPTFEYA-------YTLQGHEHS 476
Query: 384 AEDAYVKAKSLLPKAKPGESYQARIAPNHLNVFLNLANLISKNATRLEEADMLYRQAISM 443
A + Y K+K+ KA R+ H N + L + K R ++AD +++A +
Sbjct: 477 ANEEYEKSKTSFRKA-------IRVNVRHYNAWYGLGMVYLKTG-RNDQADFHFQRAAEI 528
Query: 444 RADYTQAYINRGDILIKLNRTKEAQEVYERALLYDSGNPDIYYNLGVVLLEQGKASQALA 503
+ + G I + K+A + Y+RA D + + VL+ +AL
Sbjct: 529 NPNNSVLITCIGMIYERCKDYKKALDFYDRACKLDEKSSLARFKKAKVLILLHDHDKALV 588
Query: 504 YLDKALELEPE 514
L++ + P+
Sbjct: 589 ELEQLKAIAPD 599
Score = 31.1 bits (67), Expect = 0.58
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 495 QGKASQALAYLDKALELEPEHEQALLNSAILLQELGAADLRHLARQRLLKLLDKDATNER 554
Q + SQAL +++A++L+P E A + E A + ++ K + + +
Sbjct: 444 QREHSQALKCINRAIQLDPTFEYAY---TLQGHEHSANEEYEKSKTSFRKAIRVNVRHYN 500
Query: 555 VHFNLGMVCMDEGDAECAERWFRAAVHLKPD 585
+ LGMV + G + A+ F+ A + P+
Sbjct: 501 AWYGLGMVYLKTGRNDQADFHFQRAAEINPN 531
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 40.3 bits (90), Expect = 0.001
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 15/179 (8%)
Query: 363 DDVGAHINVGRTYNHLGRYQEAEDAYVKAKSLLPKAKPGESYQARIA--PNHLNVFLNLA 420
DD+ + + +G Y R + K K K +SY I P + + +A
Sbjct: 616 DDIYSLVQLGNAYMRQAREFRVHNDREKLKRQKLYIKAIQSYDQAIKFDPKNAHAAQGIA 675
Query: 421 NLISKNATRLEEADMLYRQAISMRADYTQAYINRGDILIKLNRTKEAQEVYERALLYDSG 480
++++N + +A ++ + D T IN G+ L +L + A EV+E + +G
Sbjct: 676 IILAQNR-QFSKALLILSKVREAIKDAT-TLINIGNCLAELKQFSRAIEVFE-TVYSSTG 732
Query: 481 NPDIY---YNLGVVLLEQGKASQALAYLDK-------ALELEPEHEQALLNSAILLQEL 529
D Y LG V L++G+ S+ + YL + ALE PE+ L N A + +L
Sbjct: 733 ESDTYGVLSCLGRVWLQRGRESKNVDYLKESVRYATLALEKNPENPSLLFNVAFVQFQL 791
Score = 35.9 bits (79), Expect = 0.020
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 345 GKYSEALDFFNTA-VSVQPDDVGAHINVGRTYNHLGRYQEAEDAYVKAKSLLPKAKP 400
G + ALDF +A +SV P+ + N+ HLG EA +KAKS+LP A P
Sbjct: 457 GFLTRALDFLESAHMSVGPELLN---NIAVLQYHLGLIPEAHGNIIKAKSVLPDANP 510
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/97 (22%), Positives = 47/97 (48%)
Query: 432 EADMLYRQAISMRADYTQAYINRGDILIKLNRTKEAQEVYERALLYDSGNPDIYYNLGVV 491
EA Y+++I++ + ++I G K + E+ + +E + ++Y G +
Sbjct: 433 EAISDYQKSIALDDSFIYSHIQLGVAQYKTHAIAESMKTFEDCKKRFPNSSEVYNYFGEI 492
Query: 492 LLEQGKASQALAYLDKALELEPEHEQALLNSAILLQE 528
LL+Q K A+ D A+ELE ++++ L+ +
Sbjct: 493 LLDQQKFDDAVKNFDHAIELEKREHLTIMSAMPLINK 529
Score = 37.5 bits (83), Expect = 0.007
Identities = 38/206 (18%), Positives = 87/206 (42%), Gaps = 10/206 (4%)
Query: 307 YMRNWDWKTEYSIFASGLKVNRFNAKLYNNVGHALEAEGKYSEALDFFNTAVSVQPDDVG 366
Y+ D + + + V++ ++ LY + G+++EA+ + ++++ +
Sbjct: 391 YLDENDNEKMWKVLNDAESVDKTDSDLYYHRAQVRFVSGEFAEAISDYQKSIALDDSFIY 450
Query: 367 AHINVGRTYNHLGRYQEAEDAYVKAKSLLPKAKPGESYQARIAPNHLNVFLNLANLISKN 426
+HI +G E+ + K P + +Y I + + N +
Sbjct: 451 SHIQLGVAQYKTHAIAESMKTFEDCKKRFPNSSEVYNYFGEILLDQQKFDDAVKNF--DH 508
Query: 427 ATRLEEADMLYRQAISMRADYTQAYINRGDILIKLNRT-KEAQEVYERALLYDSGNPDIY 485
A LE+ R+ +++ + IN+ + + + +A+ + +AL D
Sbjct: 509 AIELEK-----REHLTIMS--AMPLINKALAVFQWKKDISQAENLCRQALSADPECDIAI 561
Query: 486 YNLGVVLLEQGKASQALAYLDKALEL 511
++ LL+QGKA +AL Y +K+ +L
Sbjct: 562 ASMAQFLLQQGKAREALEYFEKSAQL 587
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/76 (22%), Positives = 35/76 (46%)
Query: 437 YRQAISMRADYTQAYINRGDILIKLNRTKEAQEVYERALLYDSGNPDIYYNLGVVLLEQG 496
+ AI + + Q YI + N ++ +V A D + D+YY+ V G
Sbjct: 370 FNAAIKLDRKFIQPYIRLSAAYLDENDNEKMWKVLNDAESVDKTDSDLYYHRAQVRFVSG 429
Query: 497 KASQALAYLDKALELE 512
+ ++A++ K++ L+
Sbjct: 430 EFAEAISDYQKSIALD 445
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 636 KDLDAAESCYRRILELEPDNVQALHNLCVVAVERGKLAVAEECLTRAAALAPHEHYIQRH 695
KD+ AE+ R+ L +P+ A+ ++ +++GK A E ++A LA E +
Sbjct: 538 KDISQAENLCRQALSADPECDIAIASMAQFLLQQGKAREALEYFEKSAQLARTESEMVNA 597
Query: 696 LAVVKARR 703
+ +A R
Sbjct: 598 FSYAEATR 605
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 312 DWKTEYSIFASGLKVNRFNAKLYNNVGHALEAEGKYSEALDFFNTAVSVQPDDVGAHINV 371
+++ F L+ N L+N +G AL K +EA+ +N AVS+QP V N+
Sbjct: 453 EYERSADCFRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSLQPQYVRVRSNM 512
Query: 372 GRTYNHLGRYQEA 384
+ +LG +++A
Sbjct: 513 AVSNINLGYFEDA 525
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 630 IYINSVKDLDAAESCYRRILELEPDNVQALHNLCVVAVERGKLAVAEECLTRAAALAPHE 689
I + +K+ + + C+R+ L+ EP N + L K A RA +L P
Sbjct: 446 IIMYMLKEYERSADCFRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSLQPQY 505
Query: 690 HYIQRHLAV 698
++ ++AV
Sbjct: 506 VRVRSNMAV 514
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 611 KQLVRHHPDHVKALVLLGDIYINSVKDLDAAESCYRRILELEPDNVQALHNLCVVAVERG 670
+Q ++ P + LG N+ K+ +A S Y R + L+P V+ N+ V + G
Sbjct: 462 RQALQDEPSNEILWNKLGAALTNAEKNTEAVSS-YNRAVSLQPQYVRVRSNMAVSNINLG 520
Query: 671 KLAVAEECLTRA 682
A + L A
Sbjct: 521 YFEDAAKHLLAA 532
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 320 FASGLKVNRFNAKLYNNVGHALEAEGKYSEALDFFNTAVSVQPDDVGAHINVGRTYNHLG 379
F S L+++ + ++ +G A G+Y AL FN A + PDD + +G
Sbjct: 673 FQSALRISPKDTNAWSGLGEAYARSGRYVSALKAFNRASILDPDDWYVKYFIATLEKDMG 732
Query: 380 RYQEA-----EDAYVKAKSLLPKAKPGESY 404
Y+ A E V++K L + E+Y
Sbjct: 733 EYEVAVSTLSEILAVRSKELCVQVSLAETY 762
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 424 SKNATRLEEADMLYRQAISMRADYTQAYINRGDILIKLNRTKEAQEVYERALLYDSGNPD 483
+K+AT L+ A +QAI + A + G + + + AQ Y ++LL + +
Sbjct: 907 TKDAT-LQVAINCIKQAIKLEAKNYVFWNMLGVLFSQTKAVRSAQHCYIQSLLLNERSSG 965
Query: 484 IYYNLGVVLLEQGKASQALAYLDKALELEPEHEQALLNSA 523
++ N G + ++ A A +++ ++P++ QA L A
Sbjct: 966 VWANYGALCIQNHDVECANAAFTRSISIDPDNSQAWLGKA 1005
Score = 33.9 bits (74), Expect = 0.082
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 341 LEAEGK-YSEALDFFNTAVSVQPDDVGAHINVGRTYNHLGRYQEAEDAYVKAKSLLP 396
LE K + +A+ F +A+ + P D A +G Y GRY A A+ +A L P
Sbjct: 659 LELNAKNFHKAIVHFQSALRISPKDTNAWSGLGEAYARSGRYVSALKAFNRASILDP 715
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 614 VRHHPDHVKALVLLGDIYINSVKDLDAAESCYRRILELEPDNVQALHNLCVVAVERGKLA 673
+R P++ A LG +Y + D+ A C+++ EL+ V+A L E +
Sbjct: 568 LRKDPNYAPAYTSLG-LYYRDIHDMVRATKCFQKAFELDASQVEAAEALAKTFAEANEWE 626
Query: 674 VAE 676
+ E
Sbjct: 627 LVE 629
Score = 31.5 bits (68), Expect = 0.44
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 461 LNRTKEAQEVYERALLYDSGNPDIYYNLGVVL----LEQGKASQALAYLDKALELEPEHE 516
LN+ +++ + +E+ALL N D+ + VL E GK + A L +ALE P H
Sbjct: 1180 LNKLEKSLDCFEKALLVSDSNADVVVLVSKVLWALGSENGKQA-AREQLFEALEQSPSHI 1238
Query: 517 QALL 520
+LL
Sbjct: 1239 GSLL 1242
Score = 31.1 bits (67), Expect = 0.58
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 497 KASQALAYLDKALELEPEHEQALLNSAILLQELGAADLRHLARQRLLKLLDKDATNERVH 556
K ++L +KAL + + ++ + +L LG+ + + AR++L + L++ ++
Sbjct: 1182 KLEKSLDCFEKALLVSDSNADVVVLVSKVLWALGSENGKQAAREQLFEALEQSPSHIGSL 1241
Query: 557 FNLGMVCM-DEGDAECAERWFRAAVHLKPD 585
LG + + DE DA C+ A HLK D
Sbjct: 1242 LCLGAIAIYDEDDAVCSAIEDSIA-HLKKD 1270
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 552 NER---VHFNLGMVCMDEGDAECAERWFRAAVHLKPD 585
NER V N G +C+ D ECA F ++ + PD
Sbjct: 960 NERSSGVWANYGALCIQNHDVECANAAFTRSISIDPD 996
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 326 VNRFNAKLYNNVGHALEAEGKYSEALDFFNTAVSVQPDDVGAHINVGRTYNHLGRYQEAE 385
VN+ A+ G+ A Y +ALD + A+ + P + N YN LG+++ A
Sbjct: 78 VNKEEAEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAV 137
Query: 386 DAYVKAKSLLP 396
+ + SL P
Sbjct: 138 EDALTCLSLDP 148
Score = 34.3 bits (75), Expect = 0.062
Identities = 20/85 (23%), Positives = 37/85 (43%)
Query: 312 DWKTEYSIFASGLKVNRFNAKLYNNVGHALEAEGKYSEALDFFNTAVSVQPDDVGAHINV 371
D++ ++ ++++ + Y+N A G++ A++ T +S+ P A +
Sbjct: 98 DYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTCLSLDPHHARAFGRL 157
Query: 372 GRTYNHLGRYQEAEDAYVKAKSLLP 396
GR LG A DAY K P
Sbjct: 158 GRAKLSLGDAAAAADAYKKGLDFDP 182
Score = 29.1 bits (62), Expect = 2.3
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
Query: 455 GDILIKLNRTKEAQEVYERALLYDSGNPDIYYNLGVVLLEQGKASQALAYLDKALELEPE 514
G+ I ++A ++Y +A+ D +P Y N + G+ A+ L L+P
Sbjct: 90 GNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTCLSLDPH 149
Query: 515 HEQALLNSAILLQELGAADLRHLARQRLLKLLDKDATNE 553
H +A LG A A K LD D NE
Sbjct: 150 HARAFGRLGRAKLSLGDA---AAAADAYKKGLDFDPNNE 185
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 35.1 bits (77), Expect = 0.036
Identities = 42/166 (25%), Positives = 63/166 (37%), Gaps = 17/166 (10%)
Query: 312 DWKTEYSIFASGLKVNRFNAKLYNNVGHALEAEGKYSEALDFFNTAVSVQPDDVGAHINV 371
D+KT F + ++ N LY+N +E Y++AL ++PD
Sbjct: 17 DYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDATKCTELKPDWAKGWSRK 76
Query: 372 GRTYNHLGRYQEAEDAYVKA-------KSLLPKAKPGESYQARIA--PNHLNVFLNLANL 422
G + LG A AY + LL K E+ Q + A N F L +
Sbjct: 77 GAALHGLGDLDAARSAYEEGLKHDANNAQLLNGLKSVEAAQTQAASGAGGFNPFAKLGSQ 136
Query: 423 IS------KNATRLEEADMLYRQAISMRADYTQAYINRGDILIKLN 462
+S K A+ E A +L A + Q N G I+ +LN
Sbjct: 137 LSDPKFMEKLASNPETASLLADSAFMAKLQKIQQ--NPGSIMAELN 180
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Query: 454 RGDILIKLNRTKEAQEVYERALLYDSGNPDIYYNLGVVLLEQGKASQALAYLDKALELEP 513
+G+ K A + + +A+ D N +Y N + + AL K EL+P
Sbjct: 8 KGNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDATKCTELKP 67
Query: 514 EHEQALLNSAILLQELGAADLRHLARQRLLKLLDKDATNERV 555
+ + L LG D A + LK DA N ++
Sbjct: 68 DWAKGWSRKGAALHGLGDLDAARSAYEEGLK---HDANNAQL 106
>SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 862
Score = 34.7 bits (76), Expect = 0.047
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 437 YRQAISMRADYTQAYINR------GDILIKLNRTKEAQEVYERALLYDSGNPDIYYNLGV 490
Y++ +R T +Y+N+ + +K +A+ A D +YY G+
Sbjct: 688 YKENFQLRRGKTVSYLNQKLWLTAASLFLKSGNDDQARSALLEAKKIDHECAWVYYLNGL 747
Query: 491 VLLEQGKASQALAYLDKALELEPE 514
LL+QGK + LD A L+PE
Sbjct: 748 SLLQQGKEVEGYEQLDVAHYLDPE 771
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 34.3 bits (75), Expect = 0.062
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 453 NRGDILIKLNRTKEAQEVYERALLYDSGNPDIYYNLGVVLLEQGKASQALAYLDKALELE 512
N + +K +A ++Y +A+ DS N +Y N + L+ A+ KA+E +
Sbjct: 10 NEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAIECD 69
Query: 513 PEHEQALLNSA 523
PE+ +A A
Sbjct: 70 PEYAKAYFRRA 80
>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 565
Score = 32.7 bits (71), Expect = 0.19
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 22/208 (10%)
Query: 320 FASGLKVNRFNAKLYNNVGHALEAEGKYSEALDFFNTAVSVQPDDVGAHINVGRTYNHLG 379
F L++NR + +GH A++ + AV V D A +G+TY L
Sbjct: 361 FKRALQLNRNYLSAWTLMGHEYVELKNTHAAIESYRLAVDVNRKDYRAWYGLGQTYEVLD 420
Query: 380 RYQEAEDAYVKAKSLLPKAKPGESYQARIAPNHLNVFLNLANLISKNATRLEEADMLYRQ 439
+ A + +A +L P Y R ++ L N K R +EA Y++
Sbjct: 421 MHFYALYYFQRATALRP-------YDQR-------MWQALGNCYEK-IDRPQEAIKSYKR 465
Query: 440 AISMRADYTQAYINRGDILIKLNRTKEAQEVYERALLYDSG--NPD-IYYNLGVVLLEQG 496
A+ + + G++ +L A +Y++ + + +P+ I + + E G
Sbjct: 466 ALLGSQTNSSILVRLGNLYEELQDLNSAASMYKQCIKTEETEISPETIKARIWLARWELG 525
Query: 497 KAS--QALAYLDKAL--ELEPEHEQALL 520
K + +A YL + L +LE E +ALL
Sbjct: 526 KKNYREAELYLSEVLNGDLELEEAKALL 553
>SPAC6F12.15c |cut9|dre1|anaphase-promoting complex subunit
Cut9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 331 AKLYNNVGHALEAEGKYSEALDFFNTAVSVQPDDVGAHINVGRTYNH 377
A + N+GHA Y A+D N + + +D H + Y H
Sbjct: 516 AATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLH 562
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 307 YMRNWDWKTEYSIFASGLKVNRFNAKLYNNVGHALEAEGKYSEALDFFNTAVSVQPDD 364
Y + D + F LK+N + + G A KY A++ F+ +S+ P+D
Sbjct: 531 YYKKGDLLQAMNCFNESLKINPLSYPTWFTYGCAALELQKYDAAMEAFSRCLSINPED 588
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 29.5 bits (63), Expect = 1.8
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 467 AQEVYERALLYDSGNPDIYYNLGVVLLEQGKASQALAYLDKALELEPEHEQALLNSAILL 526
A+ V++RA + + N ++ L + L G SQ A L KAL+ P +S +L
Sbjct: 731 ARVVFDRAKVKNPKNEFLWLELIKMELRAGNISQVRAALAKALQECP-------SSGLLW 783
Query: 527 QELGAADLRHLARQRLLKLLDKDATNERVHFNLGMVCMDEGDAECAERWFRAAVHLKPD 585
E + R + R L K N + + + E A+ A WF AV D
Sbjct: 784 TEAIWLEPRAQRKTRATDALRKCEGNAHLLCTIARMLWLEKKADKARSWFLKAVKADQD 842
>SPAC13G6.08 |||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 535
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 400 PGESYQARIAPNHLNVFLNLANLISKNATRLEEADMLYRQAISMRADYTQAYINRGDILI 459
P A + P N+F + +N+ RL + L R I M ++ + R L
Sbjct: 49 PSNKETANVCPISKNLFQSYPKGSYRNSQRLTSRNGLDR-FIPMTSNKDTISLGRHSSLS 107
Query: 460 K--LNRTKEAQEVYERALLY 477
+ +N+TK A E Y++ L Y
Sbjct: 108 RNLVNKTKNASETYQQLLEY 127
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 365 VGAHINV--GRTYNHLGRYQEAEDAYVKAKSLLPK 397
V AH NV R Y H+G+ +EAE Y +A S+ K
Sbjct: 981 VSAHSNVCAARIYEHMGQAREAEFFYRQACSISEK 1015
>SPBC24C6.05 |sec28||coatomer epsilon subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 288
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 497 KASQALAYLDKALELEPEHEQALLNSAILLQELG 530
+ +AL+ L AL+ +P +E+AL N + +LG
Sbjct: 211 RPEEALSSLKTALDSQPNYEEALSNMTTAITDLG 244
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 27.9 bits (59), Expect = 5.4
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Query: 446 DYTQAYINRGDILIKLNRTKEAQEVYERALLYDSGNPDI----YYNLGVVLLEQGKASQA 501
+ Q + G+ R K+A+E Y +AL G+ DI Y N L Q
Sbjct: 62 EVAQNFREHGNECFASKRYKDAEEFYTKALAQKCGDKDIEIACYSNRAACNLLFENYRQV 121
Query: 502 LAYLDKALELEPEHEQALLNSAILLQELGAAD 533
L + L+ + H +A SA L L D
Sbjct: 122 LNDCAQVLQRDSTHAKAYYRSAKALVALKRYD 153
>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
factor |Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 444 RADYTQAYINRGDILIKLNRTKEAQEVYERALLYDSGNPDIYYNLGVVLLEQGKASQALA 503
+A Y AY+ + + A ++Y + + G Y LGV+L +QG +A+
Sbjct: 279 KAMYFDAYVYETGAFDVESDIQRAWDLYSSSA--NLGYTRSLYRLGVLLEDQGNLEEAVE 336
Query: 504 YLDKAL 509
Y +K +
Sbjct: 337 YFEKGV 342
>SPBC336.04 |cdc6|pol3, pold, mis10|DNA polymerase delta catalytic
subunit Cdc6 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 663 CVVAVERGKLAVAEECLTRAAAL 685
C +++GK A+ E CL R+A L
Sbjct: 996 CKAPIKKGKTALCENCLNRSAEL 1018
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 634 SVKDLDAAESCYRRILELEPDNVQALH----NLCVVAVERGKLAVAEECLTRAAALAPHE 689
S++ D A+ CY R + +P N L N V+ E G L A E +P+
Sbjct: 217 SLEFWDQADYCYNRAVSAKPPNKSELKKYIWNRSVLNKEHGSLKKAAEGFKFLLQSSPYN 276
Query: 690 HYIQRHLAVV 699
I ++LA +
Sbjct: 277 ASILKNLAEI 286
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 240 ALLVLPFLPASNLFFPVGFVVA---ERVLYMPSMGWC 273
A+LV P+L S F +GFV+A +Y+ + GWC
Sbjct: 522 AVLVAPYLYQSGAFMLIGFVLACFGSYFMYI-NHGWC 557
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.135 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,886,800
Number of Sequences: 5004
Number of extensions: 103563
Number of successful extensions: 351
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 278
Number of HSP's gapped (non-prelim): 76
length of query: 744
length of database: 2,362,478
effective HSP length: 78
effective length of query: 666
effective length of database: 1,972,166
effective search space: 1313462556
effective search space used: 1313462556
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
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