GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001023-TA|BGIBMGA001023-PA|undefined
         (128 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   3.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   3.6  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 62  LYCGFVFDDISAIKENRDLRPQT 84
           +Y  F+ D   A+   RD  P+T
Sbjct: 254 MYDAFLIDQSLALNRGRDENPRT 276


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 7/27 (25%), Positives = 16/27 (59%)

Query: 37  DMPDPPRRGLGAVIILACVLVYHNCLY 63
           D+ D   R  G +II+ C++ ++  ++
Sbjct: 525 DVCDSVNRIFGFIIIIGCLIQFNTIVF 551


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.144    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,846
Number of Sequences: 317
Number of extensions: 1045
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 128
length of database: 114,650
effective HSP length: 50
effective length of query: 78
effective length of database: 98,800
effective search space:  7706400
effective search space used:  7706400
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.1 bits)
S2: 39 (19.8 bits)