GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001023-TA|BGIBMGA001023-PA|undefined
         (128 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052013-1|AAK93437.1|  926|Drosophila melanogaster LD47309p pro...    87   9e-18
AE013599-3135|AAM70854.1|  926|Drosophila melanogaster CG4050-PB...    87   9e-18
AE013599-3134|AAF46676.2|  926|Drosophila melanogaster CG4050-PA...    87   9e-18
AY089484-1|AAL90222.1|  849|Drosophila melanogaster AT30101p pro...    54   8e-08
AE014134-447|AAF51225.2|  849|Drosophila melanogaster CG31690-PB...    54   8e-08
AE014134-445|AAS64621.1|  881|Drosophila melanogaster CG31690-PA...    54   8e-08
AF181645-1|AAD55431.1|  938|Drosophila melanogaster BcDNA.GH1214...    49   2e-06
AE014134-185|AAF51432.1|  938|Drosophila melanogaster CG4341-PA ...    49   2e-06
BT022723-1|AAY55139.1|  705|Drosophila melanogaster RH18934p pro...    40   8e-04
AE014297-2021|AAF55179.1|  705|Drosophila melanogaster CG5038-PA...    40   8e-04

>AY052013-1|AAK93437.1|  926|Drosophila melanogaster LD47309p
           protein.
          Length = 926

 Score = 86.6 bits (205), Expect = 9e-18
 Identities = 37/69 (53%), Positives = 50/69 (72%), Gaps = 2/69 (2%)

Query: 36  EDMPDPPRRGL--GAVIILACVLVYHNCLYCGFVFDDISAIKENRDLRPQTPISNIFLND 93
           E   + P+R L     I +AC++ Y+N   CG VFDDISAI++N+DLRP TP+ N+FLND
Sbjct: 24  EGATNSPQRNLLEFLCICVACIVCYYNSTQCGLVFDDISAIRDNKDLRPHTPLINVFLND 83

Query: 94  FWGTPIHKK 102
           FWGTP+ K+
Sbjct: 84  FWGTPMRKE 92


>AE013599-3135|AAM70854.1|  926|Drosophila melanogaster CG4050-PB,
           isoform B protein.
          Length = 926

 Score = 86.6 bits (205), Expect = 9e-18
 Identities = 37/69 (53%), Positives = 50/69 (72%), Gaps = 2/69 (2%)

Query: 36  EDMPDPPRRGL--GAVIILACVLVYHNCLYCGFVFDDISAIKENRDLRPQTPISNIFLND 93
           E   + P+R L     I +AC++ Y+N   CG VFDDISAI++N+DLRP TP+ N+FLND
Sbjct: 24  EGATNSPQRNLLEFLCICVACIVCYYNSTQCGLVFDDISAIRDNKDLRPHTPLINVFLND 83

Query: 94  FWGTPIHKK 102
           FWGTP+ K+
Sbjct: 84  FWGTPMRKE 92


>AE013599-3134|AAF46676.2|  926|Drosophila melanogaster CG4050-PA,
           isoform A protein.
          Length = 926

 Score = 86.6 bits (205), Expect = 9e-18
 Identities = 37/69 (53%), Positives = 50/69 (72%), Gaps = 2/69 (2%)

Query: 36  EDMPDPPRRGL--GAVIILACVLVYHNCLYCGFVFDDISAIKENRDLRPQTPISNIFLND 93
           E   + P+R L     I +AC++ Y+N   CG VFDDISAI++N+DLRP TP+ N+FLND
Sbjct: 24  EGATNSPQRNLLEFLCICVACIVCYYNSTQCGLVFDDISAIRDNKDLRPHTPLINVFLND 83

Query: 94  FWGTPIHKK 102
           FWGTP+ K+
Sbjct: 84  FWGTPMRKE 92


>AY089484-1|AAL90222.1|  849|Drosophila melanogaster AT30101p
          protein.
          Length = 849

 Score = 53.6 bits (123), Expect = 8e-08
 Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 45 GLGAVIILACVLVYHNCLYCGFVFDDISAIKENRDLRPQTPISNIFLNDFWGTPI 99
          GL     LA VL Y N L  GFV+DD  AI  N D+    P++N+  NDFWGTP+
Sbjct: 12 GLAGCSALAFVL-YLNTLNAGFVYDDRRAILANGDVTGARPLANLLRNDFWGTPL 65


>AE014134-447|AAF51225.2|  849|Drosophila melanogaster CG31690-PB,
          isoform B protein.
          Length = 849

 Score = 53.6 bits (123), Expect = 8e-08
 Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 45 GLGAVIILACVLVYHNCLYCGFVFDDISAIKENRDLRPQTPISNIFLNDFWGTPI 99
          GL     LA VL Y N L  GFV+DD  AI  N D+    P++N+  NDFWGTP+
Sbjct: 12 GLAGCSALAFVL-YLNTLNAGFVYDDRRAILANGDVTGARPLANLLRNDFWGTPL 65


>AE014134-445|AAS64621.1|  881|Drosophila melanogaster CG31690-PA,
          isoform A protein.
          Length = 881

 Score = 53.6 bits (123), Expect = 8e-08
 Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 45 GLGAVIILACVLVYHNCLYCGFVFDDISAIKENRDLRPQTPISNIFLNDFWGTPI 99
          GL     LA VL Y N L  GFV+DD  AI  N D+    P++N+  NDFWGTP+
Sbjct: 44 GLAGCSALAFVL-YLNTLNAGFVYDDRRAILANGDVTGARPLANLLRNDFWGTPL 97


>AF181645-1|AAD55431.1|  938|Drosophila melanogaster BcDNA.GH12144
          protein.
          Length = 938

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 26/48 (54%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 52 LACVLVYHNCLYCGFVFDDISAIKENRDLRPQTPISNIFLNDFWGTPI 99
          LA VL Y N L  GFV+DD  AI  N D+   TP    F NDFWGTP+
Sbjct: 41 LAFVL-YLNTLGAGFVYDDRRAILANADVSGGTPWQRSFSNDFWGTPL 87


>AE014134-185|AAF51432.1|  938|Drosophila melanogaster CG4341-PA
          protein.
          Length = 938

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 26/48 (54%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 52 LACVLVYHNCLYCGFVFDDISAIKENRDLRPQTPISNIFLNDFWGTPI 99
          LA VL Y N L  GFV+DD  AI  N D+   TP    F NDFWGTP+
Sbjct: 41 LAFVL-YLNTLGAGFVYDDRRAILANADVSGGTPWQRSFSNDFWGTPL 87


>BT022723-1|AAY55139.1|  705|Drosophila melanogaster RH18934p
          protein.
          Length = 705

 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 48 AVIILACVLVYHNCLYCG--FVFDDISAIKENRDLRP-QTPISNIFLNDFWGTPI 99
          A+++L C+L Y      G  FVFDD  AI +NRD+    T  + IF +DFWG  +
Sbjct: 17 AILVLICLLCYGCGGLSGAKFVFDDTVAIVKNRDVNSLPTNWTAIFTHDFWGASL 71


>AE014297-2021|AAF55179.1|  705|Drosophila melanogaster CG5038-PA
          protein.
          Length = 705

 Score = 40.3 bits (90), Expect = 8e-04
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 48 AVIILACVLVYHNCLYCG--FVFDDISAIKENRDLRP-QTPISNIFLNDFWGTPI 99
          A+++L C+L Y      G  FVFDD  AI +NRD+    T  + IF +DFWG  +
Sbjct: 17 AILVLICLLCYGCGGLSGAKFVFDDTVAIVKNRDVNSLPTNWTAIFTHDFWGASL 71


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.325    0.144    0.456 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,761,950
Number of Sequences: 52641
Number of extensions: 212378
Number of successful extensions: 547
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 537
Number of HSP's gapped (non-prelim): 10
length of query: 128
length of database: 24,830,863
effective HSP length: 77
effective length of query: 51
effective length of database: 20,777,506
effective search space: 1059652806
effective search space used: 1059652806
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 57 (27.1 bits)