Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001020-TA|BGIBMGA001020-PA|IPR009003|Peptidase,
trypsin-like serine and cysteine, IPR001254|Peptidase S1 and S6,
chymotrypsin/Hap
         (145 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    25   0.36 
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    24   0.62 
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    24   0.62 
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   1.9  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   1.9  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   1.9  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   1.9  
AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase l...    22   1.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   3.3  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 24.6 bits (51), Expect = 0.36
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 99  DSGGPAVKGNVQLGVVSFGVGCARKNNPGIYA 130
           D G P  K N+ LG    G   A   N  +YA
Sbjct: 249 DEGAPPSKINLGLGTYGRGFALADPTNTSLYA 280


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 0.62
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 99  DSGGPAVKGNVQLGVVSFGVGCARKNNPGIYA 130
           D G P  K N+ LG    G   A   N  +YA
Sbjct: 250 DEGAPPSKINLGLGSYGRGFALADPTNTSLYA 281


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 0.62
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 99  DSGGPAVKGNVQLGVVSFGVGCARKNNPGIYA 130
           D G P  K N+ LG    G   A   N  +YA
Sbjct: 250 DEGAPPSKINLGLGSYGRGFALADPTNTSLYA 281


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 75  LAKEGSSVPDKTKLLVSGWGATSGDSGGPAVKG 107
           L KEGS+      + + G G TSG SG   + G
Sbjct: 92  LPKEGSNFLKPVMVWIHGGGFTSG-SGSSEIYG 123


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 75  LAKEGSSVPDKTKLLVSGWGATSGDSGGPAVKG 107
           L KEGS+      + + G G TSG SG   + G
Sbjct: 92  LPKEGSNFLKPVMVWIHGGGFTSG-SGSSEIYG 123


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 75  LAKEGSSVPDKTKLLVSGWGATSGDSGGPAVKG 107
           L KEGS+      + + G G TSG SG   + G
Sbjct: 92  LPKEGSNFLKPVMVWIHGGGFTSG-SGSSEIYG 123


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 75  LAKEGSSVPDKTKLLVSGWGATSGDSGGPAVKG 107
           L KEGS+      + + G G TSG SG   + G
Sbjct: 91  LPKEGSNFLKPVMVWIHGGGFTSG-SGSSEIYG 122


>AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase like
           protein E4 protein.
          Length = 138

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 75  LAKEGSSVPDKTKLLVSGWGATSGDSGGPAVKG 107
           L KEGS+      + + G G TSG SG   + G
Sbjct: 64  LPKEGSNFLKPVMVWIHGGGFTSG-SGSSEIYG 95


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 22   IGSSNSNKGGTVYTAKSKVAHPKYNSKTKNND 53
            IGSS  ++  T+ TA+     P  + + + ND
Sbjct: 977  IGSSEPSETVTIITAEEVPGGPPTSIRVETND 1008


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.309    0.127    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,905
Number of Sequences: 317
Number of extensions: 1190
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 145
length of database: 114,650
effective HSP length: 51
effective length of query: 94
effective length of database: 98,483
effective search space:  9257402
effective search space used:  9257402
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.8 bits)
S2: 40 (20.2 bits)