Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001020-TA|BGIBMGA001020-PA|IPR009003|Peptidase,
trypsin-like serine and cysteine, IPR001254|Peptidase S1 and S6,
chymotrypsin/Hap
         (145 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    28   0.034
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   5.2  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 0.034
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)

Query: 92  GWGATSGDSGGPAVKGN------VQLGVVSFGVGCARKNNPGIYAKVSAAAKWIKS 141
           G  A   DSGGP +  N      V +G++S+G  C +  N     KV +   WI S
Sbjct: 341 GKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAECGKYPNGN--TKVGSYIDWIVS 394


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 80  SSVPDKTKLLVSGWGATSGDS 100
           SSVP   + L   + ++SGDS
Sbjct: 54  SSVPQPPRSLEGSYDSSSGDS 74


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.309    0.127    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,344
Number of Sequences: 429
Number of extensions: 1509
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 145
length of database: 140,377
effective HSP length: 52
effective length of query: 93
effective length of database: 118,069
effective search space: 10980417
effective search space used: 10980417
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.8 bits)
S2: 40 (20.2 bits)