Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001020-TA|BGIBMGA001020-PA|IPR009003|Peptidase,
trypsin-like serine and cysteine, IPR001254|Peptidase S1 and S6,
chymotrypsin/Hap
(145 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0172 - 1383568-1384440,1385336-1385401,1385470-1385505,138... 33 0.068
08_01_0356 + 3131214-3132443,3132584-3132778,3132892-3132972,313... 32 0.21
01_02_0089 - 10997882-10997957,10998139-10998423,10998519-109985... 30 0.84
04_03_0856 + 20336390-20336906,20337276-20337397 29 1.9
02_05_0964 - 33133516-33133689,33133780-33133857,33133997-331341... 29 1.9
12_01_1069 - 11060045-11060262,11060404-11060545,11060624-110607... 27 5.9
09_02_0206 - 5783868-5783986,5784422-5784485,5784552-5784620,578... 27 5.9
09_02_0154 + 5055946-5058721,5058754-5058770 27 5.9
08_02_1628 + 28363476-28363517,28363624-28363791,28363863-283639... 27 5.9
06_03_0389 - 20273637-20274383,20274488-20274979 27 5.9
06_03_0387 - 20244279-20245025,20245130-20245621 27 5.9
01_06_0995 + 33661367-33661380,33661729-33661826,33662059-336622... 27 5.9
10_01_0341 - 3758835-3759599,3760302-3760349 27 7.8
05_01_0446 - 3551754-3551795,3551932-3552397,3552424-3552921,355... 27 7.8
>11_01_0172 -
1383568-1384440,1385336-1385401,1385470-1385505,
1385604-1385743,1386978-1387134,1387245-1387418,
1387540-1387790,1390296-1390446
Length = 615
Score = 33.5 bits (73), Expect = 0.068
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 3 VDTEDER-IMGTRISKVTVRIGSSNSNKGGTVYTAKSKVAHPKYNSKTKNNDFAIVTVNK 61
+D DER + GTRI + I +++ G + + +HP SK D TV K
Sbjct: 135 IDIWDERKVFGTRIESLKDDILGGSTHTMGNNGNSSNPSSHPSSVSKAVRKDSG--TVTK 192
Query: 62 DMAIDGKTTKIIT 74
+ I G KI+T
Sbjct: 193 KLTIGGMPEKIVT 205
>08_01_0356 +
3131214-3132443,3132584-3132778,3132892-3132972,
3133324-3133383,3133466-3133560,3133660-3133816,
3133896-3134021,3134398-3134478,3134557-3134647,
3134735-3134868,3135068-3135136,3135219-3135308,
3135405-3135508,3135594-3135762,3136066-3136134
Length = 916
Score = 31.9 bits (69), Expect = 0.21
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 4 DTEDERIMGTRISKVTVRIGSSNSNKGGTVYTAKSKVAHPKYNSKTKNND 53
D+EDE+ + R SKVT +S S+ V +A K + +SK NND
Sbjct: 213 DSEDEKPLAARFSKVTGNASASISSSKDKVLSASIKASS---SSKMSNND 259
>01_02_0089 -
10997882-10997957,10998139-10998423,10998519-10998589,
10998685-10998761,10998858-10998963,10999062-10999189,
10999291-10999423,11000005-11000133,11000220-11000375,
11000770-11000846,11000938-11000998,11001249-11001383,
11001642-11001765,11001852-11001917,11002010-11002112,
11002603-11002652,11003795-11003895
Length = 625
Score = 29.9 bits (64), Expect = 0.84
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 41 AHPKYNSKTKNNDFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSGWGATSGDS 100
AHP + F + A+ T +++ + EG D TK L+S A +
Sbjct: 92 AHPTADVFINFASFRSAAASSMSALKQPTIRVVAIIAEGVPESD-TKQLISYARANNKVI 150
Query: 101 GGPAVKGNVQLGVVSFG 117
GPA G +Q G G
Sbjct: 151 IGPATVGGIQAGAFKIG 167
>04_03_0856 + 20336390-20336906,20337276-20337397
Length = 212
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 92 GWGATSGDSGGPAVKGNVQLGVVSFGVGCARKNNPGIYAKVSAAAKWIKSTA 143
G GA SGD GPA +G G + G G + + + + V +K+TA
Sbjct: 113 GGGAGSGDGAGPAARGVTGSGNLLAGSGAPQSGS--VLSGVGGRIPSVKATA 162
>02_05_0964 -
33133516-33133689,33133780-33133857,33133997-33134152,
33134685-33134864,33135516-33135695
Length = 255
Score = 28.7 bits (61), Expect = 1.9
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 28 NKGGTVYTAKSKVAHPKYNSKTKNNDFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTK 87
++G V A + VA PKY + D +V + + + KTT I L S P +
Sbjct: 45 SRGLVVRAAAASVA-PKYTTLKPLADRVLVKIK---SAEQKTTGGILLPSAAQSKPQGGE 100
Query: 88 LLVSGWGATSGDSGGPAVKGNVQLG 112
++ G G T GD+ V+ ++Q+G
Sbjct: 101 VVAIGEGRTVGDN---KVEVSIQVG 122
>12_01_1069 -
11060045-11060262,11060404-11060545,11060624-11060776,
11060942-11061013,11062774-11063082,11063323-11063378,
11066436-11066533,11066616-11066700,11066800-11067001,
11067471-11067542,11069555-11069624,11071829-11072038,
11072337-11072609,11073912-11074183,11075354-11075557
Length = 811
Score = 27.1 bits (57), Expect = 5.9
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Query: 12 GTRISKVTVRIGSSNSNKGGTVYTAKSKVA--------HPKYNSKTKNNDFAIVT---VN 60
GT K + G NSNK + + ++ H NSKT +NDF + + V
Sbjct: 521 GTTSKKKGQKWGMDNSNKKSSDISYHGRITGTDTEVNHHVAGNSKTSDNDFGLASNQKVG 580
Query: 61 KDMAIDGKTTKIITLAKEGSSVP 83
+ + + KI+ + SS P
Sbjct: 581 ESSHVGSASEKIVAEKGKSSSEP 603
>09_02_0206 -
5783868-5783986,5784422-5784485,5784552-5784620,
5784698-5784940,5786844-5786912,5786988-5787212,
5787289-5787532,5787607-5787716,5787948-5788016,
5788988-5789042,5789063-5789097,5789422-5789514,
5789545-5789595
Length = 481
Score = 27.1 bits (57), Expect = 5.9
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 77 KEGSSVPDKTKLLVSGWGATSGDSG-GPAVKGNVQLGVVSFGVGCARKNNPGIYAKV 132
K G VP V +++G SG GP + N +G+VSF A NP I KV
Sbjct: 218 KPGQKVPGGPS--VKAMTSSAGPSGRGPHMNRNFPVGLVSFEPSEALHINPLINRKV 272
>09_02_0154 + 5055946-5058721,5058754-5058770
Length = 930
Score = 27.1 bits (57), Expect = 5.9
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 1 MGVDTEDERIMGTRISKVTVRIGSSNSNKGGTVYTAKSKVAHPKYNSKTKNND-FAIVTV 59
+G E E++M I R S GG T ++ + K N KN D F+ +T+
Sbjct: 177 VGNKEESEKVMKLLIHGEETRTVISICGMGGLGKTTLARAIYKK-NEIRKNFDCFSWITI 235
Query: 60 NKDMAIDGKTTKII-TLAKEGSSVPDKTKLL 89
+++ ++ +I+ ++PD+T ++
Sbjct: 236 SQNYKVEDLFRRILKQFLDMNENIPDQTDIM 266
>08_02_1628 +
28363476-28363517,28363624-28363791,28363863-28363937,
28364018-28364070,28364559-28364709,28365079-28365261,
28366110-28366236,28366731-28366831,28367156-28367294,
28367359-28367420,28367702-28367754,28368266-28368290
Length = 392
Score = 27.1 bits (57), Expect = 5.9
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 14 RISKVTVRIGSSNSNKGGTVYTAKSKVAHPKYNSKTKNNDFAIVTVNKDMAIDGKTTKII 73
+I +T+++ N G + A P+ SK +ND + K++ DG T I
Sbjct: 37 KIRSLTLKV-QGGGNTGNALTAAARLGLRPRIISKV-SNDPQGRNILKELQDDGVDTSHI 94
Query: 74 TLAKEGSS 81
+A+EG+S
Sbjct: 95 LVAEEGNS 102
>06_03_0389 - 20273637-20274383,20274488-20274979
Length = 412
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 67 GKTTKIITLAKEGSSVPDKTKLLVSGWGATSGDSGGPAV---KGNVQLGVVSFGVGC 120
G T ++ L +G D TK + W A +G + KG+ G ++F C
Sbjct: 42 GSTHDVVKLGGKGDGKTDSTKAVNEAWTAACAGTGKQTIVVPKGDFLTGPLNFTGPC 98
>06_03_0387 - 20244279-20245025,20245130-20245621
Length = 412
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 67 GKTTKIITLAKEGSSVPDKTKLLVSGWGATSGDSGGPAV---KGNVQLGVVSFGVGC 120
G T ++ L +G D TK + W A +G + KG+ G ++F C
Sbjct: 42 GSTHDVVKLGGKGDGKTDSTKAVNEAWTAACAGTGKQTIVVPKGDFLTGPLNFTGPC 98
>01_06_0995 +
33661367-33661380,33661729-33661826,33662059-33662214,
33663307-33663926,33664020-33664090,33664176-33664427,
33664494-33664611,33664715-33664886,33664970-33665511
Length = 680
Score = 27.1 bits (57), Expect = 5.9
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 67 GKTTKII--TLAKEGSSVPDKT-KLLVSGWGATSGDSGGPAVKGNVQLGVVSFGV 118
G T+I+ ++ EG + T KLLV G T D G +KG V L S G+
Sbjct: 290 GDKTQIVGQSMYSEGKNSSGSTFKLLVDGGLCTDNDLNGTDIKGRVVL-CTSLGI 343
>10_01_0341 - 3758835-3759599,3760302-3760349
Length = 270
Score = 26.6 bits (56), Expect = 7.8
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 13 TRISKVTVRIGSSNSNKGGTVYTAKSKVAHPK-YNSKTKNND 53
T + + VRIG S V TA+ KV P NS KNN+
Sbjct: 89 TNLRRTVVRIGQQ-SQSPAAVRTAQPKVVDPPPANSPPKNNN 129
>05_01_0446 -
3551754-3551795,3551932-3552397,3552424-3552921,
3553288-3553334
Length = 350
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 75 LAKEGSSVPDKT-KLLVSGWGATSGDSGGPAVKGNVQ 110
+ E S+V T KL+ SG ++G SGGP + +VQ
Sbjct: 286 ICTEDSNVKGYTMKLMESGLVCSNGYSGGPLLNNDVQ 322
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.309 0.127 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,188,814
Number of Sequences: 37544
Number of extensions: 162320
Number of successful extensions: 366
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 363
Number of HSP's gapped (non-prelim): 15
length of query: 145
length of database: 14,793,348
effective HSP length: 76
effective length of query: 69
effective length of database: 11,940,004
effective search space: 823860276
effective search space used: 823860276
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 56 (26.6 bits)
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