Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001020-TA|BGIBMGA001020-PA|IPR009003|Peptidase,
trypsin-like serine and cysteine, IPR001254|Peptidase S1 and S6,
chymotrypsin/Hap
(145 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 2e-09
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 48 3e-06
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 47 5e-06
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 45 3e-05
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 44 5e-05
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 43 1e-04
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 42 2e-04
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 42 2e-04
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 42 2e-04
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 41 3e-04
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 41 3e-04
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 41 5e-04
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 41 5e-04
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.001
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.001
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 39 0.002
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.003
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 38 0.004
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.004
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.006
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.006
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.008
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.030
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.030
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.040
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.040
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 33 0.093
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.16
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.16
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.16
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.21
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 32 0.21
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 31 0.37
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.37
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.49
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_56690| Best HMM Match : NACHT (HMM E-Value=0.015) 30 0.86
SB_55465| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.86
SB_52389| Best HMM Match : NACHT (HMM E-Value=2.1e-09) 30 0.86
SB_49459| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.86
SB_46341| Best HMM Match : UPF0079 (HMM E-Value=0.18) 30 0.86
SB_15636| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.86
SB_37187| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.86
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.86
SB_27098| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.86
SB_17545| Best HMM Match : NACHT (HMM E-Value=6.7e-10) 29 1.1
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 29 1.5
SB_25361| Best HMM Match : Cadherin (HMM E-Value=0) 29 2.0
SB_19237| Best HMM Match : TP2 (HMM E-Value=5.5) 29 2.0
SB_4410| Best HMM Match : NACHT (HMM E-Value=0.014) 29 2.0
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_30948| Best HMM Match : NACHT (HMM E-Value=0.0023) 28 2.6
SB_10432| Best HMM Match : OmpH (HMM E-Value=5.2) 28 2.6
SB_3097| Best HMM Match : NACHT (HMM E-Value=2e-10) 28 2.6
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_39672| Best HMM Match : Peptidase_M20 (HMM E-Value=9.9e-09) 28 3.5
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 28 3.5
SB_31257| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 27 8.1
SB_19374| Best HMM Match : Phage_integrase (HMM E-Value=4.3) 27 8.1
SB_19734| Best HMM Match : RNA_pol_Rpb1_5 (HMM E-Value=0) 27 8.1
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 27 8.1
SB_5140| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 58.4 bits (135), Expect = 2e-09
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 40 VAHPKYNSKTKN-NDFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSGWG---- 94
+ HP Y+ T+ +D A++ + K I+ K + LA + D K V+G
Sbjct: 216 ITHPSYHKPTRYAHDIALIELAKPAVIN-KAVGLACLADPSFPIDDGKKCWVTGLDEGGI 274
Query: 95 -ATSGDSGGPAV---KGNVQL-GVVSFGVGCARKNNPGIYAKVSAAAKWIKS 141
+ GDSGGP V G L GVVS+G GCA + G+YAKV +WI+S
Sbjct: 275 DSCQGDSGGPMVCENNGRFYLDGVVSWGHGCAGRGKFGVYAKVRYVKEWIES 326
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 48.8 bits (111), Expect = 2e-06
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 42 HPKYNSKTKN-NDFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSGWGATSGDS 100
HP Y+S + ND A++ +++ +D + T + LA S +PD T+ +SGWG S
Sbjct: 327 HPNYHSPVQYANDIALLLLDRPARLD-RYTNLACLAPRSSPLPDGTRCWISGWGRLSSGG 385
Query: 101 GGPAVKGNVQLGVVSFGVGCAR 122
P V Q+ +VS G C++
Sbjct: 386 ASPNVLMQAQVPLVS-GQTCSQ 406
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 48.0 bits (109), Expect = 3e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 92 GWGATSGDSGGPAV--KGNVQ--LGVVSFGVGCARKNNPGIYAKVSAAAKWIKST 142
G A GDSGGP V +G+V +G +S+GVGCAR G+YA + W++ST
Sbjct: 289 GIDACQGDSGGPLVCKEGDVWYLMGAISWGVGCARGGRYGVYADMMDLKYWVQST 343
Score = 29.9 bits (64), Expect = 0.86
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 40 VAHPKYNSKTKNN-DFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSGWGATSG 98
+ HPKY ++ D A++ + + + + + + L + + T+ +SGWG
Sbjct: 186 ILHPKYAPHNNHDYDVALIKLASPLQYNDRV-RPVCLPSLKEDLEENTQCYISGWGHLQE 244
Query: 99 DSGGPAVKGNVQLGVVSFGVGCARKNNPGIYAKVSAAAKWIKSTAG 144
GP V + +VS C + N ++ KVS+ + AG
Sbjct: 245 AGHGPWVLHQAAVPLVSRDT-CQKAYN-DLHYKVSSRMRCAGYGAG 288
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 47.6 bits (108), Expect = 4e-06
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 23 GSSNSNKG-GTV--YTAKSKVAHPKYNSKTKNNDFAIVTVNKDMAIDGKTTKIITLAKEG 79
G N +G GT +T + + HP Y +T ++D A++ ++ ++ K +I L KEG
Sbjct: 1389 GEHNLRRGDGTEQDFTVRQVIVHPNYRRQTTDSDVALLRLSHPATLN-KAVSLICLPKEG 1447
Query: 80 SSVPDKTKLLVSGWGATSGDSGGPAVKGNVQLGVVS 115
S ++GWG T + G +V + +VS
Sbjct: 1448 ESEAVGKNCYITGWGRTGYNRPGASVLQEAMMPIVS 1483
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 47.2 bits (107), Expect = 5e-06
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 90 VSGWGATSGDSGGPAVKGN----VQLGVVSFGVGCARKNNPGIYAKVSAAAKWI 139
V G GDSGGP V N +GV S+G GCA + PGIYAK++ W+
Sbjct: 393 VPGIDTCQGDSGGPLVCENNNKWTLVGVTSWGYGCAHPDYPGIYAKLTELKDWV 446
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Query: 98 GDSGGPAVKGNVQL-------GVVSFGVGCARKNNPGIYAKVSAAAKWI 139
GDSGGP V + ++ G VS+GVGCARK PGIY + WI
Sbjct: 627 GDSGGPFVCKDPRVTSRFILHGAVSWGVGCARKGQPGIYTDIKKYLNWI 675
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 44.0 bits (99), Expect = 5e-05
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 92 GWGATSGDSGGPAV---KGNVQL-GVVSFGVGCARKNNPGIYAKVSAAAKWIKSTAG 144
G A GDSGGP V KG + G S+G GCA N G+YA V W++ G
Sbjct: 472 GIDACQGDSGGPLVCEYKGRWHIEGATSWGYGCASPNQYGVYAHVRYLKAWVQGIMG 528
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 42.7 bits (96), Expect = 1e-04
Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 92 GWGATSGDSGGPAV---KGNVQL-GVVSFGVGCARKNNPGIYAK 131
G + GDSGGP V G L GVVS+G+GCAR G+YAK
Sbjct: 48 GIDSCQGDSGGPMVCEYNGKFNLEGVVSWGIGCARPGKYGVYAK 91
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 41.9 bits (94), Expect = 2e-04
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 92 GWGATSGDSGGPAV---KGNVQL-GVVSFGVGCARKNNPGIYAKVSAAAKWIKSTAG 144
G A GDSGGP V G + G S+G GCA N G+YA V W++ G
Sbjct: 128 GIDACQGDSGGPLVCEYNGRWHIEGATSWGYGCASPNQYGVYAHVRYLKAWVQGIMG 184
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/55 (47%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 94 GATSGDSGGPAV---KGNVQL-GVVSFGVGCARKNNPGIYAKVSAAAKWIKSTAG 144
GA GDSGGP V G L GVVSFG G + +Y KVS WI AG
Sbjct: 125 GACQGDSGGPLVCERNGQWTLYGVVSFGAGNCEVTSYTVYTKVSNYLDWITKRAG 179
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 16 SKVTVRIGSSNSNKGGTVYTAKSKVAHPKY-NSKTKNNDFAIVTVNKDMAIDGKTTKIIT 74
S TV +G+ GT + + H KY K K +D A++ + K A K + +
Sbjct: 364 SDYTVIVGAHKRVLDGTEHKLSAFYKHEKYVGGKDKKHDLALIRLAKPAAFSAKVSPVC- 422
Query: 75 LAKEGSSVPDKTKLLVSGWGATSG 98
L K+G + ++ +GWG SG
Sbjct: 423 LPKQGDLLGNEKNCYTTGWGRVSG 446
Score = 32.7 bits (71), Expect = 0.12
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 84 DKTKLLV---SGWGATSGDSGGPAV--KGN--VQLGVVSFGVGCARKNNPGI-YAKVSAA 135
DKT ++ SG A SGDSGGP V +G V G VS+G + + YA++S+
Sbjct: 479 DKTTMICAGGSGSSACSGDSGGPLVCHEGGTWVLRGAVSWGTSHSCPGRMFVAYARISSH 538
Query: 136 AKWIK 140
WI+
Sbjct: 539 IDWIE 543
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 41.1 bits (92), Expect = 3e-04
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 92 GWGATSGDSGGPAVKGN-----VQLGVVSFGVGCARKNNPGIYAKVSAAAKWIKST 142
G + GDSGGP V N V GVVS+G GCAR G+Y V +I+ T
Sbjct: 172 GRDSCGGDSGGPLVCSNADGQYVLRGVVSWGEGCARPKKYGVYLDVRRTLPFIEGT 227
Score = 34.7 bits (76), Expect = 0.030
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 42 HPKYN----SKTKNNDFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSGWGATS 97
HPKY T + D A+V + + A+ K + L ++ S PD V+GWG T+
Sbjct: 333 HPKYKLGGLDYTGDYDIALVKLKRP-AVFYKRVHSVCLPEKSWSPPDGAGCYVTGWGRTA 391
Query: 98 GDSGGPAVKGNVQLGVVS 115
+ G V Q+ +VS
Sbjct: 392 ENEGYSDVLREAQVRLVS 409
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 53 DFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSGWGATSGDSGGPAVKGNVQLG 112
D A++ + + A+ K + L +++ TK V+GWG T+ S V +++
Sbjct: 84 DVALIKLKRP-AVFHKRVHSVCLPSVTANLTTGTKCFVTGWGKTAEGSPYSPVLNELEVD 142
Query: 113 VVS 115
+VS
Sbjct: 143 IVS 145
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 41.1 bits (92), Expect = 3e-04
Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 92 GWGATSGDSGGPAV---KGNVQL-GVVSFGVGCARKNNPGIYAKVSAAAKWIK 140
G A GDSGGP V G + G S+G GCA G+YAKV WIK
Sbjct: 78 GIDACQGDSGGPMVCENGGRFYIHGATSWGYGCAAPGLYGVYAKVKYLLPWIK 130
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 40.7 bits (91), Expect = 5e-04
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 92 GWGATSGDSGGPAV--KGNV--QLGVVSFGVGCARKNNPGIYAKVSAAAKWIKST 142
G G DSGGP +G + G+VS+GVGC N G+Y+ + W++ T
Sbjct: 220 GCGPCQFDSGGPLACSEGGLWYMYGIVSYGVGCGVANKFGVYSNMYELTDWVRDT 274
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 40.7 bits (91), Expect = 5e-04
Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 92 GWGATSGDSGGPAVKGNVQ-------LGVVSFGVGCARKNNPGIYAKVSAAAKWIKSTAG 144
G + GDSGGP V N + +GV S+G GCAR GIYA V WI G
Sbjct: 402 GVDSCQGDSGGPFVCTNPENPRQWTLVGVTSWGKGCARALKYGIYANVRRYLHWINLITG 461
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 39.1 bits (87), Expect = 0.001
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 95 ATSGDSGGPAVKGNVQ-----LGVVSFGVGCARKNNPGIYAKVSAAA--KWIKSTAGL 145
A GDSG P V +G+ S+G GCA+K G+YA + +A WI TAGL
Sbjct: 912 ACKGDSGSPIVVKRTDGSWSAVGLSSWGEGCAQKGKFGVYADLLSAEYDLWITRTAGL 969
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 40 VAHPKYNSKTKNNDFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSGWGATSGD 99
+ HP+Y+ + ND A++ +++ + D + K+ T + ++GWG+T G
Sbjct: 158 IEHPEYDDRKIKNDIALLELSRPVKFD-REGKVGTACLTNQQPTPGKRCYITGWGSTIGT 216
Query: 100 SGGPAVKGNVQLGVVS 115
P + L + S
Sbjct: 217 GNSPRILQQAMLPIAS 232
Score = 31.9 bits (69), Expect = 0.21
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 94 GATSGDSGGPAV---KGNVQL-GVVSFGVGCARKNNPGIYAKVSAAAKWIKSTAG 144
G +GDSGGP V G L G VS+G ++A+V++ WIK G
Sbjct: 260 GGCNGDSGGPLVCEDNGRWYLHGAVSYGKLHCPTTYYTVFARVASYTDWIKQVTG 314
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 94 GATSGDSGGPAV---KGN-VQLGVVSFGV-GCARKNNPGIYAKVSAAAKWIKST 142
G GDSGGP V KG V +GV S+ GCA G+YA V WI+ T
Sbjct: 1968 GTCKGDSGGPLVCESKGRWVLMGVTSWSYNGCADSGYAGVYADVVYFKDWIRQT 2021
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 37.9 bits (84), Expect = 0.003
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 92 GWGATSGDSGGPAV----KGNVQL-GVVSFGVGCARKNNPGIYAKVSAAAKWI 139
G + GDSGGP V G L GV S+G GCA G+YA V WI
Sbjct: 209 GVDSCQGDSGGPLVCEDTNGRWHLEGVTSWGYGCAAPRMYGVYASVRYLRDWI 261
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 37.9 bits (84), Expect = 0.003
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 40 VAHPKYNSKTKNNDFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSGWGATSGD 99
+ HPKYN + ND A++ + + D K+ T+ + ++GWGA +GD
Sbjct: 512 IEHPKYNDRRIVNDIALLELATPVQFD-SAGKVGTVCLTDQRPAPGKRCYITGWGAINGD 570
Query: 100 S-GGPAVKGNVQLGVVSFGVGCARK 123
+ P + L + S C RK
Sbjct: 571 TQQSPDILQQAMLPIASH-ENCRRK 594
Score = 32.3 bits (70), Expect = 0.16
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 94 GATSGDSGGPAV---KGNVQL-GVVSFGVGCARKNNPGIYAKVSAAAKWIK 140
G +GDSGGP V G+ L G VS+G+ + ++A+V++ WIK
Sbjct: 281 GGCNGDSGGPLVCEDNGSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWIK 331
Score = 32.3 bits (70), Expect = 0.16
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 94 GATSGDSGGPAV---KGNVQL-GVVSFGVGCARKNNPGIYAKVSAAAKWIK 140
G +GDSGGP V G+ L G VS+G+ + ++A+V++ WIK
Sbjct: 615 GGCNGDSGGPLVCEDNGSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWIK 665
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 92 GWGATSGDSGGPAV--KGNVQL--GVVSFGVGCARKNNPGIYAKVSAAAKWI 139
G GDSGGP V GN GV S+G GCA G+YA V +W+
Sbjct: 808 GVDTCQGDSGGPLVCQHGNQWFLTGVTSWGHGCAFAGKYGVYAGVQQLKQWV 859
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 37.5 bits (83), Expect = 0.004
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Query: 98 GDSGGPAVK-----GN---VQLGVVSFGVGCARKNNPGIYAKVSAAAKWIKSTA 143
GDSGG V+ G V G+VS+G GC +K+ G Y +V WI TA
Sbjct: 289 GDSGGSFVREFRREGKYRWVSAGIVSWGEGCGQKDKYGFYTRVEPYVHWIIKTA 342
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 37.5 bits (83), Expect = 0.004
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 92 GWGATSGDSGGPAVKGNVQL----GVVSFGVGCARKNNPGIYAKVSAAAKWIKS 141
G A DSGGP V + G S+G GCAR G+YA V W+ S
Sbjct: 291 GIDACQRDSGGPLVSKTGERFYIHGATSWGYGCARSGKFGVYAHVKNLIGWVTS 344
Score = 29.9 bits (64), Expect = 0.86
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 40 VAHPKYNSK-TKNNDFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSGWGATSG 98
+ HP Y T +D A++ + K ++ + L G + D T ++GWG +
Sbjct: 191 ILHPSYGKPVTLAHDIALLKLEKSATVNNNV-HTVCLPFNGPAPSDCTHCWITGWGHLAS 249
Query: 99 DSGGPAVKGNVQLGVVS 115
P + + +VS
Sbjct: 250 GGDTPDLLQQASVPIVS 266
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 37.5 bits (83), Expect = 0.004
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 36 AKSKVAHPKYNS-KTKNNDFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKL-LVSGW 93
AK + HP + S +T ND A+V + + + G + + I L +G ++ K V+GW
Sbjct: 81 AKDIILHPNFKSLQTFYNDIALVKLRTRVKL-GPSVRTICLPHKGEALLSPGKYGFVAGW 139
Query: 94 GATSGDSGGPAVKGNVQL--GVVSF--GVGCARKNNPG 127
G+T G G L G F G G K +PG
Sbjct: 140 GSTEKLRSGTTYHGEALLSPGKYGFVAGWGSTEKLDPG 177
Score = 37.5 bits (83), Expect = 0.004
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
Query: 98 GDSGGPAVK-----GN---VQLGVVSFGVGCARKNNPGIYAKVSAAAKWIKST 142
GDSGG V+ G V G+VS+G GC K G Y +V + WI ST
Sbjct: 231 GDSGGSFVREVRREGKYRWVSAGIVSWGEGCGIKGKYGFYTRVESYLSWINST 283
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 92 GWGATSGDSGGPAV---KGNVQL-GVVSFGVGCARKNNPGIYAKVSAAAKW 138
G GDSGGP V +G + G S+G GCA+ G+YA V W
Sbjct: 877 GIDTCQGDSGGPMVCESRGRFYIHGATSWGYGCAQPGKFGVYAHVKNLVAW 927
Score = 31.1 bits (67), Expect = 0.37
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 11/70 (15%)
Query: 26 NSNKGGT-VYTAKSKVAHPKYNSKTKNNDFAIVTVNKDMAIDGKTTKIITLAKEGSSVPD 84
NS +G + K + HP YNS +ND A++ ++ + L+ G V
Sbjct: 129 NSPEGTEQTHDVKRIITHPTYNSPQLSNDIALIELSSP----------VPLSDRGHQVSV 178
Query: 85 KTKLLVSGWG 94
+K ++GWG
Sbjct: 179 GSKCFITGWG 188
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 37.1 bits (82), Expect = 0.006
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 92 GWGATSGDSGGP---AVKGNVQL-GVVSFGVGCARKNNPGIYAKVSAAAKWIKST 142
G A DSGGP ++ L GVVS+G CAR G+YA + W++ T
Sbjct: 228 GVDACQFDSGGPLSCSIGSRFYLTGVVSWGHECARPKKYGVYANMMRMTSWVRDT 282
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 36.7 bits (81), Expect = 0.008
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 19 TVRIGSSNSNKG---GTVYTAKSKVAHPKYNSKTKNNDFAIVTVNKDMAIDGKTTKIITL 75
TV++G S+ + G + K+ HP+YNS + +D A++ + + + + + I +
Sbjct: 1293 TVQVGVSDMRRRDGKGQSLSIKAIFVHPQYNSSSHEHDLAVLQLQQPAEFNSRVSPICIV 1352
Query: 76 AKEGSSVPDKTKLLVSGWG 94
A E V V+GWG
Sbjct: 1353 ANE--EVQAGRACAVAGWG 1369
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 34.7 bits (76), Expect = 0.030
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 91 SGWGATSGDSGGPAVKGN-----VQLGVVSFG-VGCARKNNPGIYAKVSAAAKWI 139
+G +GDSGGP V N V GVVS+G C+ N+ ++A+VS WI
Sbjct: 219 TGKNGCNGDSGGPFVCRNTAGQWVLQGVVSWGDPECSSANHFSVFARVSVLRHWI 273
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 34.7 bits (76), Expect = 0.030
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 42 HPKYN----SKTKNNDFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSGWGATS 97
HPKY T + D A+V + + A+ K + L ++ S PD V+GWG T+
Sbjct: 618 HPKYKLGGLDYTGDYDIALVKLKRP-AVFYKRVHSVCLPEKSWSPPDGAGCYVTGWGRTA 676
Query: 98 GDSGGPAVKGNVQLGVVS 115
+ G V Q+ +VS
Sbjct: 677 ENEGYSDVLREAQVRLVS 694
Score = 30.3 bits (65), Expect = 0.65
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 98 GDSGGP----AVKGN-VQLGVVSFGVGCARKNNPGIYAKVSAAAKWIKST 142
GDSGGP G+ V G++S+G CA + G+Y V +I+ST
Sbjct: 175 GDSGGPLSCQTESGDWVLTGLMSWGEKCALPDKYGVYTDVRRMLPFIEST 224
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 53 DFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSGWGATSGDSGGPAVKGNVQLG 112
D A++ + + A+ K + L +++ TK V+GWG T+ S V V++
Sbjct: 344 DVALIKLKRP-AVFHKCVYSVCLPSVTANLTTGTKCYVTGWGKTAEGSPYSLVLNEVEVD 402
Query: 113 VVS 115
+VS
Sbjct: 403 IVS 405
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 53 DFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSGWGATSGDSGGPAVKGNVQLG 112
D A++ + + A+ K + L +++ TK V+GWG T+ S V +++
Sbjct: 461 DVALIKLKRP-AVFHKRVHSVCLPSVTANLTTGTKCFVTGWGKTAEGSPYSPVLNELEVD 519
Query: 113 VVS 115
+VS
Sbjct: 520 IVS 522
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 34.3 bits (75), Expect = 0.040
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 84 DKTKLLVSGWG--ATSGDSGGPAV--KGN--VQLGVVSF-GVGCARKNNPGIYAKVSAAA 136
++T + V G G A +GDSGGP V +G V GV S+ NN +YA+VS+
Sbjct: 106 EETMMCVGGAGSSACNGDSGGPLVCEEGGKWVLRGVASWVATSQCPVNNYSVYARVSSDV 165
Query: 137 KWIK 140
WI+
Sbjct: 166 DWIQ 169
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 34.3 bits (75), Expect = 0.040
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 99 DSGGPAV--KGN--VQLGVVSFGVGCARKNNPGIYAKVSAAAKWIKS 141
DSGGP KG +G+VS+G CAR + G+Y++++ W+ S
Sbjct: 223 DSGGPLACQKGGRYYAVGLVSWGDECARAHKFGVYSRMAKLTPWMVS 269
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 33.1 bits (72), Expect = 0.093
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 92 GWGATSGDSGGPAV---KGNVQL-GVVSFGVGCARKNNPGIYAKVSAAAKWIKS 141
G A DSGGP +G L GVVS+G C + G+YA ++ W+++
Sbjct: 167 GVDACQYDSGGPLACEERGRWYLTGVVSYGHECGNPHKYGLYADMATLNTWVEN 220
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 32.7 bits (71), Expect = 0.12
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 94 GATSGDSGGPAV---KGNVQL-GVVSFGVGCARKNNPGIYAKVSAAAKWIK 140
G +GDSGGP V G+ L G VS+G+ + ++A+V++ WIK
Sbjct: 945 GGCNGDSGGPLVCEDNGSWFLHGAVSYGMKYCPTTHYTVFARVASYTDWIK 995
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 90 VSGWGATSGDSGGPAV--KGNVQL--GVVSFGVGCARKNNPGIYAKVSAAAKWI 139
V G +GDSGGP V + V + G VS+G + ++ +VS+ WI
Sbjct: 668 VGAAGGCNGDSGGPLVCEQSGVWVLHGAVSYGARWCPTDYYTVFTRVSSYVAWI 721
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 32.3 bits (70), Expect = 0.16
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 18 VTVRIGSSN---SNKGGTVYTAKSKVAHPKYNSKTKNNDFAIVTVNKDMAIDGKTTKIIT 74
+TVRIG+ + S G + +P +N KT + D A + + + + ++ +++
Sbjct: 93 LTVRIGNHHVDISTPGEDTIPVLEVLTYPHFNGKTLDGDLAAIFLARSPMLSIESERVLL 152
Query: 75 LAK----EGSSVPDK-TKLLVSGWGATSG 98
K + + + T L V+GWG SG
Sbjct: 153 ARKLWLPRDNLISSRITTLTVTGWGHRSG 181
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 32.3 bits (70), Expect = 0.16
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 12/57 (21%)
Query: 95 ATSGDSGGP---------AVKG---NVQLGVVSFGVGCARKNNPGIYAKVSAAAKWI 139
A GDSGGP KG +V LGV+S+G GC + G+Y ++ WI
Sbjct: 305 ACQGDSGGPFSVDNPLPATPKGQHRHVLLGVISWGDGCGKFGKYGVYTRLFNFIDWI 361
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 32.3 bits (70), Expect = 0.16
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 92 GWGATSGDSGGPAV--KGN--VQLGVVSFGVGCARKNNPGIYAKVSAAAKWI 139
G G GDSGGP V +G V G VS+G ++ ++A+VS+ WI
Sbjct: 250 GMGGCQGDSGGPFVCNEGGRWVLRGAVSWGQPMCGTDHYTVFARVSSFIDWI 301
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 31.9 bits (69), Expect = 0.21
Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 37 KSKVAHPKYNSKTKNNDFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSG 92
K +AHP+YN+ +ND A++ + + + + L G +P ++ ++G
Sbjct: 550 KKVIAHPQYNNPRLSNDIALIELASPAKLSSRVNP-VCLPPHGYKLPAGSRCFITG 604
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 31.9 bits (69), Expect = 0.21
Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Query: 37 KSKVAHPKYNSKTKNNDFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSGWGAT 96
K V +P +N + ND A++ + + + + + + VP ++GWG
Sbjct: 18 KKLVYNPGFNERHYRNDIALLELERPVLTNPHVSPVCLPPVNAGKVPVGKNCFITGWGRV 77
Query: 97 SGDSGGPAVKGNVQLGVVSFGVGCARKN 124
S +L VV+ C +KN
Sbjct: 78 FEGSDEAEFLQEAEL-VVASNAKCDKKN 104
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 31.1 bits (67), Expect = 0.37
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
V +N +DGK + + EG SV K TK L S W G SG S P V+
Sbjct: 289 VKMNNMFVVDGKVKEACKVLLEGDSVAGKTTLTKKLASDWAKGVLSGSSTFPEVE 343
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 31.1 bits (67), Expect = 0.37
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 79 GSSVPDKTKLLVSGWG--ATSGDSGGP--AVKGN--VQLGVVSFGVGCARKNNP-GIYAK 131
G++V + + + G G A +GDSGGP ++ V GV S+ N +YA+
Sbjct: 450 GATVDENSMICAGGAGSSACNGDSGGPLQCLENERWVLRGVASWVTAETCPGNTFSVYAR 509
Query: 132 VSAAAKWIKS 141
VS+ + WI+S
Sbjct: 510 VSSYSNWIES 519
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 30.7 bits (66), Expect = 0.49
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 97 SGDSGGPAV--KGN--VQLGVVSFGVGCARKNNPGIYAKVSAAAKWIK 140
SGDSGGP V +G +G+ S+G C + P +++ V AA WI+
Sbjct: 481 SGDSGGPLVCERGGRWFLMGLSSWGWVCPQA-RPKVFSDVLAAMDWIR 527
Score = 29.1 bits (62), Expect = 1.5
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 12 GTRISKVTVRIGSSNS-NKGGT--VYTAKSKVAHPKYNSKTKNNDFAIVTVNKDMAIDGK 68
G ++ V +G N GT V + ++H Y+ T + D+A++ + + +
Sbjct: 344 GVNVTTVLTVLGEWRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNF--- 400
Query: 69 TTKIITLAKEGSSVPDKTKLLVSGWGATS 97
T + + S P T V+GWG+T+
Sbjct: 401 TQYVQPVCLPDSDFPAGTLCYVTGWGSTN 429
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 30.7 bits (66), Expect = 0.49
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 97 SGDSGGPAV--KGN--VQLGVVSFGVGCARKNNPGIYAKVSAAAKWIK 140
SGDSGGP V +G +G+ S+G C + P +++ V AA WI+
Sbjct: 730 SGDSGGPLVCERGGRWFLMGLSSWGWVCPQA-RPKVFSDVLAAMDWIR 776
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 10 IMGTRISKVTVRIGSSNS-NKGGT--VYTAKSKVAHPKYNSKTKNNDFAIVTVNKDMAID 66
+ R S + + +G N GT V + ++H Y+ T + D+A++ + + +
Sbjct: 591 VQDERASNIKLTMGEWRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNF- 649
Query: 67 GKTTKIITLAKEGSSVPDKTKLLVSGWGATS 97
T + + S P T V+GWG+T+
Sbjct: 650 --TQYVQPVCLPDSDFPAGTLCYVTGWGSTN 678
>SB_56690| Best HMM Match : NACHT (HMM E-Value=0.015)
Length = 180
Score = 29.9 bits (64), Expect = 0.86
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
V +N +DGK K + EG S K TK L S W G SG S P V+
Sbjct: 52 VKMNSMFVVDGKVKKACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVE 106
>SB_55465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 29.9 bits (64), Expect = 0.86
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
V +N +DGK K + EG S K TK L S W G SG S P V+
Sbjct: 52 VKMNSMFVVDGKVKKACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVE 106
>SB_52389| Best HMM Match : NACHT (HMM E-Value=2.1e-09)
Length = 818
Score = 29.9 bits (64), Expect = 0.86
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
V +N +DGK K + EG S K TK L S W G SG S P V+
Sbjct: 229 VKMNSMFVVDGKVKKACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVE 283
>SB_49459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 29.9 bits (64), Expect = 0.86
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
V +N +DGK K + EG S K TK L S W G SG S P V+
Sbjct: 35 VKMNSMFVVDGKVKKACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVE 89
>SB_46341| Best HMM Match : UPF0079 (HMM E-Value=0.18)
Length = 156
Score = 29.9 bits (64), Expect = 0.86
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
V +N +DGK K + EG S K TK L S W G SG S P V+
Sbjct: 52 VKMNSMFVVDGKVKKACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVE 106
>SB_15636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1311
Score = 29.9 bits (64), Expect = 0.86
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
V +N +DGK K + EG S K TK L S W G SG S P V+
Sbjct: 291 VKMNNMFVVDGKVKKACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVE 345
>SB_37187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 29.9 bits (64), Expect = 0.86
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
V +N +DGK K + EG S K TK L S W G SG S P V+
Sbjct: 52 VKMNSMFVVDGKVKKACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVE 106
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 29.9 bits (64), Expect = 0.86
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
V +N +DGK K + EG S K TK L S W G SG S P V+
Sbjct: 742 VKMNSMFVVDGKVKKACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVE 796
>SB_27098| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 29.9 bits (64), Expect = 0.86
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
V +N +DGK K + EG S K TK L S W G SG S P V+
Sbjct: 16 VKMNSMFVVDGKVKKACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVE 70
>SB_17545| Best HMM Match : NACHT (HMM E-Value=6.7e-10)
Length = 321
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
V +N +DGK K + EG S K TK L S W G SG S P V+
Sbjct: 35 VKMNSMFVVDGKVKKACKVHLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVE 89
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 1 MGVDTEDERIM---GTRISKVTVRIGSSNSNKGGTVYTAKSKVAHPKYNSKTKNNDF 54
M ++ E E++ G IS +T +IGS N+ GT+ + K ++ K ++++F
Sbjct: 1017 MEIEIEKEQLKSSHGEEISDLTKKIGSVQENEEGTLESVKESNSNILQEKKKQSDEF 1073
>SB_25361| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 4833
Score = 28.7 bits (61), Expect = 2.0
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 15 ISKVTVRIGSSNSNKGGTVYTAKSKVAHPKYNSKTKNNDFAIVTVNKDMAIDGKTTKIIT 74
++ VTV + N N+ V+T S+ A ++N +V ++D+ DG T IT
Sbjct: 2079 VTNVTVVLRDVNDNQ--PVFTM-SEYAAEVSEGVVESNIVTVVAEDRDIGSDGSVTYCIT 2135
Query: 75 LAKEG 79
+EG
Sbjct: 2136 QGREG 2140
>SB_19237| Best HMM Match : TP2 (HMM E-Value=5.5)
Length = 177
Score = 28.7 bits (61), Expect = 2.0
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 6 EDERIMGTRISKVTVRIGSSNSNKGGTVYTAKSKVAHPKYNSKTKNNDFAIVTVNKDMAI 65
E ++ ++ VTVR G+ K G V +K K+ PK K + + I VN D +
Sbjct: 72 EKDKDRNSKTFAVTVRKGAGKGKKAGCVKKSKQKII-PKKKLKNQTEKW-IDNVNDDFS- 128
Query: 66 DGKTTKIITLAKE--GSSVPDKTK 87
+TL KE VP+ T+
Sbjct: 129 --SLQPELTLPKEQLDKQVPNNTQ 150
>SB_4410| Best HMM Match : NACHT (HMM E-Value=0.014)
Length = 127
Score = 28.7 bits (61), Expect = 2.0
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 59 VNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
+N +DGK K + EG S K TK L S W G SG S P V+
Sbjct: 1 MNSMFVVDGKVKKACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVE 53
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 112 GVVSFG--VGCARKNNPGIYAKVSAAAKWI 139
GVVS+G +GC N G+Y +V+ WI
Sbjct: 326 GVVSWGSSLGCGLPNKYGVYVRVTQFLGWI 355
>SB_30948| Best HMM Match : NACHT (HMM E-Value=0.0023)
Length = 180
Score = 28.3 bits (60), Expect = 2.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
V +N +DGK + + EG S K TK L S W G SG S P V+
Sbjct: 52 VKMNNMFVVDGKVKEACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVE 106
>SB_10432| Best HMM Match : OmpH (HMM E-Value=5.2)
Length = 393
Score = 28.3 bits (60), Expect = 2.6
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGP 103
V +N +DGK K + EG S K TK L S W G SG S P
Sbjct: 301 VKMNNMFVVDGKVKKACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFP 352
>SB_3097| Best HMM Match : NACHT (HMM E-Value=2e-10)
Length = 295
Score = 28.3 bits (60), Expect = 2.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
V +N +DGK + + EG S K TK L S W G SG S P V+
Sbjct: 35 VKMNNMFVVDGKVKEACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVE 89
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 28.3 bits (60), Expect = 2.6
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 57 VTVNKDMAIDGKTTKIITLAKEGSSVPDK---TKLLVSGW--GATSGDSGGPAVK 106
V +N +DGK + + EG S K TK L S W G SG S P V+
Sbjct: 601 VKMNNMFVVDGKVKEACKVLLEGDSGAGKTTLTKKLASDWAKGVLSGSSTFPEVE 655
>SB_39672| Best HMM Match : Peptidase_M20 (HMM E-Value=9.9e-09)
Length = 702
Score = 27.9 bits (59), Expect = 3.5
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 69 TTKIITLAKEGSSVPDKTKLLVSGWGATSGDSGGPAVKGNVQ-LGVVSFGVGCARKNNPG 127
TT +T+ + G VP + L ++ + S + VK + Q + + +G + +N G
Sbjct: 627 TTTAVTMCQAG--VPTRVTLAIT-YALPSHPTTTAVVKHDRQCIDTSRYPLGVSLSSNDG 683
Query: 128 IYAKVSAAAKWIKSTA 143
+Y + +W+ TA
Sbjct: 684 LYRVICYVCRWLNMTA 699
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 27.9 bits (59), Expect = 3.5
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 10 IMGTRISKVTVRIGSSNSNKGGTVYTAKSKVA----HPKYNSKTKNNDFAIVTVNKDMAI 65
I R ++V VR+G+ + T KV+ H YNS+T ND A++ + +
Sbjct: 434 ISSKRPAEVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNYNSRTMYNDIALL----KLPL 489
Query: 66 DGKTTKIITLAKEGSSVPDK 85
+ T L K G S DK
Sbjct: 490 QHRQTGRHRLIKSGHSRTDK 509
>SB_31257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 27.5 bits (58), Expect = 4.6
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 8 ERIMGTRISKVTVRIGSSNSNKGGTVYTAKSKVA--HPKYN---SKTKNNDFAIVTVNKD 62
ER+ G K V + K G+ KV P++ SK KNN I+ D
Sbjct: 64 ERVSGAWCEKQKVYANIGKAEKSGSPKCEWEKVLGLSPRFGFSVSKVKNNYVEIINAQSD 123
Query: 63 MAIDG 67
++DG
Sbjct: 124 ESVDG 128
>SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 10 IMGTRISKVTVRI-GSSNSNKGGTVYTAKSKVAHPKYNSKTKNNDF 54
I+G V + +++S+ TV A HP+ N K K N+F
Sbjct: 35 IIGIEYENVLQKFQNATSSSSSPTVKEASKTERHPRSNEKPKKNEF 80
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 27.1 bits (57), Expect = 6.1
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 5/113 (4%)
Query: 16 SKVTVRIGSSN--SNKGGTVYTAKSKVAHPKYNSK-TKNNDFAIVTVNKDMAIDGKTTKI 72
S +++G+ + S++G + H ++ + + D AI+ + I G T
Sbjct: 338 SNYKIKLGAHDRESSEGALTIPVTAIHMHTRFMTDGSYGYDIAIMKLANPAPI-GHTISP 396
Query: 73 ITLAKEGSSVPDKTKLLVSGWGATSGDSGGPAVKGNVQLGVVSFGVGCARKNN 125
L V T V+GWG T + G + ++ VVS C R NN
Sbjct: 397 ACLPGLYDQVTSGTMCYVTGWGMTEYGNAGARLLQQARIPVVS-SEECERVNN 448
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 26.6 bits (56), Expect = 8.1
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 53 DFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKTKLLVSGWGATSGDSGGPAVKGNVQLG 112
D A++ +++ I+ + + + L +GS + T ++GWG T+ QL
Sbjct: 138 DIALLKLSRPAVIN-EFVRTVCLPAQGSRALEGTMCFITGWGKTNITEDKSVTLREAQLP 196
Query: 113 VV 114
+V
Sbjct: 197 IV 198
>SB_19374| Best HMM Match : Phage_integrase (HMM E-Value=4.3)
Length = 275
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 14 RISKVTVRIGSSNSNKGGTVYTAKSKVAHPKYNSKTKNND 53
RIS V R + +K T +A +AH Y+ + K+N+
Sbjct: 179 RISHVLSRSSKEDRSKSVTTLSASGDMAHSIYHQQHKSNN 218
>SB_19734| Best HMM Match : RNA_pol_Rpb1_5 (HMM E-Value=0)
Length = 1452
Score = 26.6 bits (56), Expect = 8.1
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 9/82 (10%)
Query: 24 SSNSNKGGTVYTAK--SKVAHPKYNSKTKNNDFAIVTVNKDMAIDGKTTKIITLAKEGSS 81
SS+ K T + K S P ++SKT VT K A KT+K T +
Sbjct: 1184 SSSIEKKDTSFKKKVTSSAKSPSHSSKT-------VTKEKQAATSSKTSKSSTSQGKSPK 1236
Query: 82 VPDKTKLLVSGWGATSGDSGGP 103
V KTK +V S D P
Sbjct: 1237 VVSKTKKVVKTKPDVSQDKEKP 1258
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 26.6 bits (56), Expect = 8.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 37 KSKVAHPKYNSKTKNNDFA 55
K + HPK+N K N DFA
Sbjct: 131 KRIIVHPKFNGKFVNGDFA 149
>SB_5140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 26.6 bits (56), Expect = 8.1
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 37 KSKVAHPKYNSKTKNNDFAIVTVNKDMAIDGKTTKIITLAKEGSSVPDKT 86
++ + S + ++F V D+ K+T +IT KE S+ P+K+
Sbjct: 97 ETNIEQANSTSDFQESNFEQVNSTSDIQKSSKSTNVITEFKEPSTKPEKS 146
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.309 0.127 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,634,460
Number of Sequences: 59808
Number of extensions: 173981
Number of successful extensions: 414
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 339
Number of HSP's gapped (non-prelim): 95
length of query: 145
length of database: 16,821,457
effective HSP length: 76
effective length of query: 69
effective length of database: 12,276,049
effective search space: 847047381
effective search space used: 847047381
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 56 (26.6 bits)
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