Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001019-TA|BGIBMGA001019-PA|IPR008555|Protein of unknown
function DUF837
(209 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 37 0.002
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 34 0.018
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 33 0.040
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.053
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 31 0.093
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 30 0.22
SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr 1|... 30 0.22
SPBC577.04 |||human THOC5 homolog|Schizosaccharomyces pombe|chr ... 29 0.66
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 29 0.66
SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces... 28 0.87
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 28 0.87
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 27 1.5
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 27 2.7
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 27 2.7
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 27 2.7
SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|ch... 26 3.5
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 26 4.6
SPBC13E7.06 |msd1|mug172|spindle pole body protein Msd1|Schizosa... 26 4.6
SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe... 26 4.6
SPAC6F6.10c |arc2|arc34|ARP2/3 actin-organizing complex subunit ... 26 4.6
SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 25 6.1
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 6.1
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 6.1
SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyce... 25 8.1
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 25 8.1
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 25 8.1
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 25 8.1
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 25 8.1
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 25 8.1
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 36.7 bits (81), Expect = 0.002
Identities = 39/195 (20%), Positives = 87/195 (44%), Gaps = 15/195 (7%)
Query: 11 DAKRLAGRLKERETEADALLSETQATYRQIHTMKQYKEEVDTLNE----ASRERPRGALI 66
+ + L +L+E E D + + ++ +K+ E+ +T N A E+
Sbjct: 1367 EKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRLAAAWNEKCENLKK 1426
Query: 67 ASIERESQLMRGVQRENGELRAALEDHRRALELIMSKYRQHTEKKIWESRIDFTSAINEK 126
+S+ R + L + + +N EL + ++ + I S + + ++ ES I ++
Sbjct: 1427 SSLTRFAHLKQELTNKNKELTSKNAENEAMQKEIESL--KDSNHQLQESASSDAEQITKE 1484
Query: 127 QQELIRQQAERI--------NEMTTVMYKAINMDENSEARKDEELYQRLITENKGL-REM 177
Q E ++ + ER NE+ + +A++ D +E E+ L ++ +GL +++
Sbjct: 1485 QFEQLKSEKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLVQQV 1544
Query: 178 LDLSRRYGSDRVMAP 192
+LS + R +P
Sbjct: 1545 QNLSAELAALREHSP 1559
Score = 27.5 bits (58), Expect = 1.5
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 5 IQQIILDAKRLAGRLKERETEADALLSETQATYRQIHTMKQYKEEVDTLNEASRERPR-G 63
IQ++ + ++L L +TE + L +E A ++ MK+Y SR + R
Sbjct: 1290 IQELEKEVEKLNASLNPLQTEINELKAEIGAKTASLNLMKEYN---------SRWKLRFQ 1340
Query: 64 ALIASIERESQLMRGVQRENGELRAALEDHRRALELIMSKYRQHTEKKIWESRIDFTSAI 123
+++ ER ++N E ALE ++ LE + + + T+ ++ ++ +++
Sbjct: 1341 SVLNKYERVDPTQLEELKKNCE---ALEKEKQELETKLQETAKETD--TFKQQV---NSL 1392
Query: 124 NEKQQELIRQQAERINEMTTVMYKAINMD-EN---SEARKDEELYQRLITENKGL 174
NE+ + L +++ E+ N T + A N EN S + L Q L +NK L
Sbjct: 1393 NEEVENL-KKEVEQANTKNTRLAAAWNEKCENLKKSSLTRFAHLKQELTNKNKEL 1446
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 33.9 bits (74), Expect = 0.018
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Query: 70 ERESQLMRGVQRENGELRAALEDHRRALELIMSKYRQHTEKKIWESRIDFTSAINEKQQE 129
E + +LM GV+ + L ++I+S Y + K + D + I +
Sbjct: 749 ESQKELMYGVRNDIDALVKTCTTSLNDADIILSDYISDQKSKFESKQQDLIANIGKIVSN 808
Query: 130 LIRQQAERINEMTTVMYKAINMDENSEARKDEEL 163
+++Q E + +++ +N D NS RK E+
Sbjct: 809 FLQEQNESLYTKADILHSHLN-DTNSNIRKANEI 841
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 32.7 bits (71), Expect = 0.040
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 17/153 (11%)
Query: 30 LSETQATYRQIHTMKQYKEEVDTLNEASRERPRGALIASIERESQLMRGVQRENGELRAA 89
L+ T YR+ M Q E + + ER + L ++ +L RG Q N +L+
Sbjct: 1626 LTSTVNKYREQLAMVQSLNEHAESSLSKAERSKNYLTGRLQEVEELARGFQTTNADLQNE 1685
Query: 90 LEDHRRALELIMSKYRQHTEKKIWESRIDFTSAINEKQQELIRQQAERINEMTTVMYKAI 149
L D + K +++ + +S D+ + + +K++ L++Q I+E + +
Sbjct: 1686 LAD-------AVVKQKEYEVLYVEKSN-DYNTLLLQKEK-LMKQ----IDEFHVIRVQ-- 1730
Query: 150 NMDENSEARKDEELYQRLITENKGLREMLDLSR 182
D +KD+ L+QR E G + L+ R
Sbjct: 1731 --DLEEREKKDQLLFQRYQKELNGFKVQLEEER 1761
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 32.3 bits (70), Expect = 0.053
Identities = 29/126 (23%), Positives = 61/126 (48%), Gaps = 16/126 (12%)
Query: 51 DTLNEASRERPRGALIASIERESQLMRGVQRENGELRAALEDHRRALELIMSKYRQHTEK 110
++++E+ E+P +A IE E + + +GE++ +E + S+ EK
Sbjct: 97 NSVDESVAEKPEKEDLAVIESEDK----AAKPDGEIKKNVETE------VTSRSTSSQEK 146
Query: 111 KIWESRIDFTSAINEKQQELIRQQAERINEMTTVMYKAINMDENSEARKDEELYQRLITE 170
E ++ +NE++ + I++ ERIN++T Y + N++ D E Q L+++
Sbjct: 147 DELEKQVKTLHDLNEQKDKKIKELKERINDLT---YDYETLKANAD---DSEGKQTLVSK 200
Query: 171 NKGLRE 176
+ E
Sbjct: 201 REAALE 206
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 31.5 bits (68), Expect = 0.093
Identities = 36/170 (21%), Positives = 69/170 (40%), Gaps = 8/170 (4%)
Query: 4 TIQQIILDAKRLAGRLKERETEADALLSETQATYRQIHTMKQYKEEVDTLN---EASRER 60
+I +I + L ++ + + ALL Q+ + T+K ++ + +N E +
Sbjct: 316 SINEIQTQNRDLKLETEKLQDQIKALLERNQSLQEALETVKNDEKNLREMNANYETEMKE 375
Query: 61 PRGALI---ASIERESQLMRGVQRENGELRAALEDHRRALEL--IMSKYRQHTEKKIWES 115
R L A I R + + L +L + LE +S+ R ++ +S
Sbjct: 376 ARQKLNNKEALISHYDDDFRAKELKISRLSESLREKAGLLEFQSSVSEQRDLLYQEQIQS 435
Query: 116 RIDFTSAINEKQQELIRQQAERINEMTTVMYKAINMDENSEARKDEELYQ 165
I + K + L+ + E N + K + +DE + KDE+L Q
Sbjct: 436 SIKDMENVFRKNEYLMEELNELKNNLEVESSKVLRLDEEMKCLKDEQLSQ 485
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 30.3 bits (65), Expect = 0.22
Identities = 30/156 (19%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 15 LAGRLKERETEADALLSET---QATYRQIH-TMKQYKEEVDTLNEASRERPRGALIASIE 70
+ G LK ++ D+L +AT+ +++ T+ + + L EA+ I ++
Sbjct: 68 MKGLLKLYQSGIDSLTKRAKSAEATFFRVYETLGEVPDPYPLLIEAANNLKTQKQIEDLK 127
Query: 71 RESQLMRGVQRENGELRAALEDHRRALELIMSKYRQHTEKKIWESRIDFTSAINEKQ--- 127
+E + M G + +L +E+ R+ L+ EK+ ++ + + E+Q
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLY 187
Query: 128 QELIRQQAERINEMTTVM--YKAINMDENSEARKDE 161
+++ ++ A I ++T+ + +A +D + +A ++E
Sbjct: 188 KDMEQENASTIQKLTSKIRELQASQLDHDLQASQNE 223
>SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 809
Score = 30.3 bits (65), Expect = 0.22
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 147 KAINMDENSEARKDEELYQRLITENKGLREMLDLSRRYGSDRVMAPPMEDKDVQ 200
K +D++ EEL +++ E + ++ +++Y SD+ AP D+Q
Sbjct: 446 KKTGIDDSEVGVSIEELKDKILKEKPDYKSFVEEAQKYVSDKPKAPSFAGSDIQ 499
>SPBC577.04 |||human THOC5 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 200
Score = 28.7 bits (61), Expect = 0.66
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 13/163 (7%)
Query: 29 LLSETQATYRQIHTMKQYKEEVDTLN--EASRERPRGALIASIERESQLMRGVQRE--NG 84
+L T+ +IH +KQ+ + D N + R+ LI + VQ +
Sbjct: 12 VLDSTRTLCLRIHELKQHSRDADDQNPEQIKRQLMSKLLILREANRKSYEQLVQAKTITA 71
Query: 85 ELRAALEDHRRALELIM-SKYRQHTEKKIWESRIDFTSAIN-EKQQELIRQQAERINEMT 142
E ++ L++ R L+ + K T K +E + +A+ ++E +++ E +
Sbjct: 72 EHKSELDNARIRLQALQYKKLHLKTIIKNYEEKEHIYTALPLVSKEEFLKEHPEFKSSND 131
Query: 143 TVMYKAINMDENSEARK----DEELYQR---LITENKGLREML 178
+ AI DE E ++ +EL +R LI+ENK R L
Sbjct: 132 HDLMLAILEDELKERQRLSTLKQELLKRKAALISENKAKRNAL 174
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 28.7 bits (61), Expect = 0.66
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 12/168 (7%)
Query: 15 LAGRLKERETEADALLSETQATY-RQIHTMKQYKEEVDTLNEASRERPRGALIASIERES 73
L L + + D+ SE +A + I ++K E+ L E E A I+ +
Sbjct: 233 LESSLAKSNSLLDSSKSEMEALKAKSISDATKHKNEIFQLEEKLHEASHEAEISIKKLND 292
Query: 74 QLMRGVQRENG---ELRAALEDHRRAL-ELIMSKYRQHTEKKIWESRIDFTSAINEKQQE 129
R + EN LE + + + ELI+++ + ES ID A E+ ++
Sbjct: 293 AENRIKELENNPTLSFNPELEKNLKLMQELIVAESSKTQHIVELESCIDSLKAETERWKK 352
Query: 130 L-IRQQAERINE------MTTVMYKAINMDENSEARKDEELYQRLITE 170
+ I ++ +I+E MTTV K+I + DE+LY R E
Sbjct: 353 VAINAKSAKIDEDIRLFTMTTVPMKSIRELISPNGFLDEQLYIRYFVE 400
>SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 735
Score = 28.3 bits (60), Expect = 0.87
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 12 AKRLAGRLKERETEADALLSETQATYRQIHTMKQYKEEVDTLNEASRERPRG 63
A R+ R+K E D L AT ++ HT+ +D SR RP G
Sbjct: 346 ALRVYERIKNEEGSLDFLHRAFSATIKEYHTVWTATPRLDPKTGLSRYRPGG 397
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 28.3 bits (60), Expect = 0.87
Identities = 31/161 (19%), Positives = 61/161 (37%), Gaps = 6/161 (3%)
Query: 22 RETEADALLSETQATYRQIHTMKQYKEEVDTLNEASRERPRGALIASIERESQLMRGV-Q 80
R AD + + R +H K ++ TL + S E S
Sbjct: 759 RSAIADLEIKDLLVRKRLLHEEPMTKLDLSTLRLIRTDSEAFDTFVSDELNSLCATNAYN 818
Query: 81 RENGELRAALEDHRRALELIMSKYRQHTEKKIWESRID---FTSAINEKQQELIRQQAER 137
R + LR +++ + + S +++H + KI++ ++D F +NE +
Sbjct: 819 RISTFLRMQIDEECKPCQFKKSNFKEHFQNKIYQEQLDKLNFQKYLNESKCSHSPIYGSN 878
Query: 138 INEMTTVMYKAINMDENSEARKDEELYQRLITENKGLREML 178
+ + + K + + KD+ LY L+ K LR +
Sbjct: 879 LIRLAEKLPKHSTSIDYTLYAKDDPLY--LLNTTKALRSCI 917
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 27.5 bits (58), Expect = 1.5
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 72 ESQLMRGVQRENGELRAALEDHRRALELIMSKYRQHTEKKIWESRIDFTSAINEKQQELI 131
+++++ Q ++GEL+ LE+ AL ++ + RQ + R++ T K ++I
Sbjct: 976 QTRVLISDQSQDGELKELLEEKENALIMMEEEMRQVNDANTELLRVNATLKSQLKNYDMI 1035
Query: 132 -------RQQAERINEMTTVMYKAINMDENSE-ARKDEELYQR--LITENKGLREMLDL 180
++ RI T K +N + E +R EE +R + E + +EML L
Sbjct: 1036 IVEQTSQLKEKNRIIASLTKATKILNSASSIEQSRNSEEKSRRDSSLMEMRTQKEMLVL 1094
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 26.6 bits (56), Expect = 2.7
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 18 RLKERETEADALLSETQATYRQIHTMKQYKEEVDTLNEASRERPRGALIASIERESQLMR 77
+LK+ E ET +++R + +QYK++V L + E R I + Q ++
Sbjct: 721 QLKQHELTLLIEQRETDSSFRLLSDYQQYKDDVKDLKQRLPELDR-----LILQSDQAIK 775
Query: 78 GVQRENGELRAALEDHRRALELIMSKYRQHTEK---KIWESRIDFTSAINEKQQ---ELI 131
++R+ E + LE ++Y+ ++ + +S D+ E +Q EL
Sbjct: 776 KIERDMQEWKHNKGSKMAELEKEFNQYKHKLDEFTPILEKSENDYNGVKLECEQLEGELQ 835
Query: 132 RQQAERI-NEMTTVMYKAINMDENSEARKDEELYQRLITE 170
Q + E TT + K + E + +EE ++ +TE
Sbjct: 836 NHQQSLVQGESTTSLIKT-EIAELELSLVNEEHNRKKLTE 874
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 26.6 bits (56), Expect = 2.7
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Query: 68 SIERESQLMRGVQRENGELRAALEDHRRALELIMSKYRQHTEKKIWESRIDFTS--AINE 125
S E + +++ ++ G + LE+ ++RQ I + +I A NE
Sbjct: 139 SEEEKCDVLKAYEKGKGSMDVILEEVMCCEISDEDRFRQVINNAIKDGKISKYKRFAPNE 198
Query: 126 KQQELIRQQAERINEMTTVMYKAINMDENSEARK-----DEELYQRLITENKGLR 175
K+++ + AER + + + +DEN + R+ DEE LI + R
Sbjct: 199 KKRKRRAKAAEREAQEAEELSMELGLDENLKKRRKAGASDEEALSALIRSRQKSR 253
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 26.6 bits (56), Expect = 2.7
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 110 KKIWESRIDFTSAINE--KQQELIRQQAERINEMTTVM----YKAINMDENSEARKDEEL 163
KK +E +FT + ++E +R+ E I+E+TTV+ +AI A+ E+
Sbjct: 972 KKAYEQFNNFTKQRDSLLARREELRRSQESISELTTVLDQRKDEAIERTFKQVAKSFSEI 1031
Query: 164 YQRLITENKG 173
+ +L+ +G
Sbjct: 1032 FVKLVPAGRG 1041
>SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 3.5
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 9/177 (5%)
Query: 11 DAKRLAGRLKERETEADALLSETQATYRQIHTMKQYKEEVDTLNEASRERPRGALIASIE 70
D K L+E ++ L+ E Q T + + K ++++ + +R AL +
Sbjct: 582 DMKIQLDLLEELQSRVQKLVPERQTTLQALQ-QKCLQDDISESLMQNSKRKDSALDTN-- 638
Query: 71 RESQLMRGVQRENGELRAALEDHRRALELIMSKYRQHTEKKIWESRIDFTSAINEKQQEL 130
QL ++ LR L R +L++++ R T+K + +F + +
Sbjct: 639 ---QLFELELKKFDPLRNRLHASYRQQQLLLNEMRNVTQKL--KQNPEFLRKMEVYNNQF 693
Query: 131 IRQQAERINEMTTVMY-KAINMDENSEARKDEELYQRLITENKGLREMLDLSRRYGS 186
+ + N +++ + KAI+ + + + QRL NK L E L L R+ G+
Sbjct: 694 SKNKELCSNLLSSSLTAKAISEGVSKGLEYYKTVEQRLAEINKTLGEQLLLRRKQGA 750
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 25.8 bits (54), Expect = 4.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 44 KQYKEEVDTLNEASRERPRGALIASIERESQLMRGV 79
K Y EE+ +N ASR + + I+S E+ S+ + V
Sbjct: 107 KGYDEEMYKVNPASRNKSQSNNISSHEKSSKTTKNV 142
>SPBC13E7.06 |msd1|mug172|spindle pole body protein
Msd1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 4.6
Identities = 20/99 (20%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Query: 79 VQRENGELRAALEDHRRALELIMSKYRQHTEKKIWESRIDFTSAINEKQQELIRQQAERI 138
+Q E L + D+ + +I R E+++ + + NE +++ +R+
Sbjct: 30 IQAEKLRLSHDIRDNCNIVNIIYRLLRATDEERLEKESLLDAIKNNEYEKQRDNNTIKRL 89
Query: 139 NEMTTVMYKAINMDENSEARKDEELYQRLITENKGLREM 177
+ + N + R E LIT+NKGL+++
Sbjct: 90 KNELELYQNECQLQLN-KVRTLERDQAELITQNKGLKDV 127
>SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 520
Score = 25.8 bits (54), Expect = 4.6
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 114 ESRIDFTSAINEKQQELIRQQAERINEMTTVMYKAINMDENSEARKDEELYQRLITENKG 173
E +ID++S + + LIRQ ++++ ++ E S ++EL+ I E++
Sbjct: 27 EDQIDYSSNLEQNYNSLIRQGSDQVIPLSRF------ASEKSALELEKELFSERIPESQS 80
Query: 174 LRE 176
E
Sbjct: 81 AAE 83
>SPAC6F6.10c |arc2|arc34|ARP2/3 actin-organizing complex subunit
Arc34|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 4.6
Identities = 19/103 (18%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 8 IILDAKRLAGRLKERETEADALLSETQATYRQIHTMKQYKEEVDTLNEASRERPRGALIA 67
I++D ++L +E+E A ++ S + + + ++ + L + +R+ P A +
Sbjct: 90 ILIDLQQLPATDEEKEQLAMSI-SMLKRNVLAAPFHRAFTKQAE-LADLARKDPENAPML 147
Query: 68 SIERESQLMRGVQRENGELRAALEDHRRALELIMSKYRQHTEK 110
+ SQ + + + E +H R + +K+R+ T++
Sbjct: 148 DKQATSQELMAIHYRDEETIVLWPEHDRVTVVFSTKFREETDR 190
>SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 25.4 bits (53), Expect = 6.1
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 12 AKRLAGRLKERETEADALLSETQATYRQIHTMKQYKEEVDTLNEASRERPRGALIASIER 71
A+ ++ +K R A A SE + I ++ + + D++N S+ I
Sbjct: 349 AQEISTIIKARLKTA-ATTSEKNNPFTPIKSISEVSD--DSINVVSQHADETPFIHPAAI 405
Query: 72 ESQLMRGVQRENGELRAALEDHRRALELIMSKYR-QH 107
E R V +G+LR AL+ R A+EL +++ QH
Sbjct: 406 EL-CARKVAASSGDLRKALDICRHAIELAEREWKAQH 441
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 6.1
Identities = 12/52 (23%), Positives = 26/52 (50%)
Query: 151 MDENSEARKDEELYQRLITENKGLREMLDLSRRYGSDRVMAPPMEDKDVQTD 202
+DE E + EE +++++ E+ DL GSD+ M +++ ++
Sbjct: 197 IDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEESSE 248
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.4 bits (53), Expect = 6.1
Identities = 32/154 (20%), Positives = 63/154 (40%), Gaps = 5/154 (3%)
Query: 12 AKRLAGRLKERETEADALLSETQATYRQIHTMKQYKEEVDTLNEASRERPRGA-LIASIE 70
AKR A +RE E A + R+ + + E + EA + R A A E
Sbjct: 625 AKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEENAKRE 684
Query: 71 RESQLMRGVQRENGELRAALEDHRRALELIMSKYRQHTEKKIWESRIDFTSAINEKQQEL 130
E ++ R + EN + +A E R A + + + E+ +D + N + E+
Sbjct: 685 AEEKVKRETE-ENAKRKAEEEGKREADK--NPEIKSSAPLASSEANVDTSKQTNATEPEV 741
Query: 131 I-RQQAERINEMTTVMYKAINMDENSEARKDEEL 163
+ + + E++ +++ +S + K + L
Sbjct: 742 VDKTKVEKLKASEGKSTSSLSSPSHSTSSKRDLL 775
>SPCC330.02 |rhp7|SPCC613.14|Rad7 homolog Rhp7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 563
Score = 25.0 bits (52), Expect = 8.1
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 92 DHRRALELIMSKYRQHTEKKIWESRIDFTSAINEKQQELIRQQAERINEMTTV-MYKAIN 150
+ R EL K + T KK+ + +D ++ + Q IR AE IN++ +N
Sbjct: 157 EDRSVPELRTRKRKALTRKKVAAATMDEEISVPKLQDLCIRVIAEYINDIEAFGDIGQVN 216
Query: 151 MDENSE 156
MD+ S+
Sbjct: 217 MDKISQ 222
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 25.0 bits (52), Expect = 8.1
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 19/109 (17%)
Query: 79 VQRENGELRAALEDHRRALELIMSKYRQHTEKKIWESRIDFTSAINEKQQELIRQQAERI 138
+Q +N ELRA L++ R A I S +Q K+ + Q EL++++ + +
Sbjct: 48 LQEKNAELRAELDNIRNAQAAIRSS-KQTLINKV------------KAQDELLKKKVKEL 94
Query: 139 NEM-TTVMYKA-INMDEN---SEARKDEELYQRLITENKGLREMLDLSR 182
M TV +K+ + +D++ +A D +++ E K LRE+ +R
Sbjct: 95 TAMKKTVPFKSEVELDKHVKQLQAAVDSGTL-KIVDEKKYLREISQCNR 142
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 25.0 bits (52), Expect = 8.1
Identities = 15/71 (21%), Positives = 29/71 (40%)
Query: 6 QQIILDAKRLAGRLKERETEADALLSETQATYRQIHTMKQYKEEVDTLNEASRERPRGAL 65
Q++ + L ++K E + L A Y + ++ Y+EE NE + E
Sbjct: 117 QKLQTSQQVLTNQIKSYEKKYYTLKKTKSAYYNKCRNLEDYEEESKESNETTSEAITDLT 176
Query: 66 IASIERESQLM 76
S ++ L+
Sbjct: 177 TVSSPQQQSLL 187
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 25.0 bits (52), Expect = 8.1
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 51 DTLNEASRERPRGALIASIERESQLMRGVQRENGELRAALEDHRRALELIMSKYRQHTEK 110
D+ N S E A + E +L+ QR++ E + +++ALE + K R+ ++
Sbjct: 335 DSSNVESSEDVDPASLLQNEEFHKLIEERQRQHEERLKRINANKKALEELNQKKRELAQQ 394
Query: 111 KIWESRI 117
++ E +
Sbjct: 395 QLKEQEL 401
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 25.0 bits (52), Expect = 8.1
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 122 AINEKQQELIRQQAERINEMTTVMYKAINMDENSEARKDEEL 163
A+ +++QE+I + +RI E+T + K ++ D ++A +E L
Sbjct: 161 ALAKREQEMIEDRRQRIKEVTENLEKRLD-DWIAKATTEEGL 201
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.0 bits (52), Expect = 8.1
Identities = 15/68 (22%), Positives = 27/68 (39%)
Query: 131 IRQQAERINEMTTVMYKAINMDENSEARKDEELYQRLITENKGLREMLDLSRRYGSDRVM 190
I Q E + + ++ ++ + DE + + E Y + NK E+ L +YG
Sbjct: 32 IDQLQENVTSKSHLLEESSSEDEEINSFQINEEYAKRFEHNKKREELQKLEAKYGEQMAN 91
Query: 191 APPMEDKD 198
E D
Sbjct: 92 GVDGEGSD 99
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.128 0.339
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,667
Number of Sequences: 5004
Number of extensions: 31383
Number of successful extensions: 151
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 134
Number of HSP's gapped (non-prelim): 33
length of query: 209
length of database: 2,362,478
effective HSP length: 70
effective length of query: 139
effective length of database: 2,012,198
effective search space: 279695522
effective search space used: 279695522
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 52 (25.0 bits)
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