Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001017-TA|BGIBMGA001017-PA|undefined
(134 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45619| Best HMM Match : M (HMM E-Value=0.01) 33 0.11
SB_6162| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.74
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_11988| Best HMM Match : Ank (HMM E-Value=5.1e-32) 29 1.3
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_41314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_23697| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05) 27 4.0
SB_30536| Best HMM Match : fn3 (HMM E-Value=0.079) 27 4.0
SB_2798| Best HMM Match : DNA_pol_B_2 (HMM E-Value=7.9e-10) 27 4.0
SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24) 27 5.2
SB_31407| Best HMM Match : TolA (HMM E-Value=2.5) 27 6.9
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 27 6.9
SB_43805| Best HMM Match : YscO (HMM E-Value=6) 27 6.9
SB_47522| Best HMM Match : HLH (HMM E-Value=1e-17) 26 9.1
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 26 9.1
>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
Length = 1315
Score = 32.7 bits (71), Expect = 0.11
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 25 KEQTGIEIDI-DFNERLRDV-DPLKAIERLEQIERETIQRLDHDQNGRELNNA 75
KE++G+E + D +L D +KA+ + ++ ER+TI+RL D N +NA
Sbjct: 546 KERSGLENQLADLKLQLADEKSTIKALRKQQENERDTIERLTSDVNNLTEDNA 598
>SB_6162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1808
Score = 29.9 bits (64), Expect = 0.74
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 47 KAIERLEQIERETIQRLDHDQNGRELNNATGVNLPN 82
K ++R I R + DH + RE +N+T VN P+
Sbjct: 861 KLVKRRSSISRSLVTAQDHLHSSRENSNSTSVNEPS 896
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 56 ERETIQRLDHDQNGRELNNATGVNLPNAAASFASCTMSLL 95
+R I NG ELN G ++P+ +FA TM+++
Sbjct: 1082 DRSGISDTGRSVNGNELNFCIGKDVPSGGKAFAKFTMTMV 1121
>SB_11988| Best HMM Match : Ank (HMM E-Value=5.1e-32)
Length = 639
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 57 RETIQRLDHDQNGRELNNATGVNLPNAAASFASCTMSLLEECELWRAEREPEPNNVLSFE 116
+E + D +N E N ++ ++ ++S+ E + E P F+
Sbjct: 248 QEKSPKCDETKNHEETQFCKNTARNNGTSATSTLSLSVTPSEEYTLSNYEQIPLTFKKFK 307
Query: 117 EFSPRNMTSRNHYESEFE 134
+PRN T + YE++ +
Sbjct: 308 HHNPRNSTHKGDYEADHD 325
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 28.3 bits (60), Expect = 2.3
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 2 EEASRAIAAEIPRAPCLEDWMKFKEQTGIEID--IDFNERLRDVDPLKAIERLEQIERET 59
EE + E+ R LE +E+ E ++ R R+V + +ER E+ ERE
Sbjct: 642 EEERARLQRELERRRELERLRVLRERREREERERLERERREREVLERERLER-ERAERER 700
Query: 60 IQRLDHDQNGRELNNAT 76
+QR++ ++ RE +N T
Sbjct: 701 LQRVERERIEREPSNTT 717
>SB_41314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1388
Score = 28.3 bits (60), Expect = 2.3
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 23 KFKEQTGIEIDIDFNERLRDVDPLKAIERLEQIERETIQRLDHDQNGRELNNATGVNLPN 82
KF E+ I + R DV LKA++ L+ +ER + H NG E+ A + +
Sbjct: 795 KFLEKGAIGLVPLRGYRGHDVQSLKALQWLKYLERRDGVCIQHAGNGGEVRLAGRIKVDG 854
Query: 83 AAA 85
AA
Sbjct: 855 YAA 857
>SB_23697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 27.5 bits (58), Expect = 4.0
Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 26 EQTGIEIDIDFNERLRDVDPLKAIERLEQIERETIQRLDHDQNGRELNNATGVNLPN 82
E+ + + + +E L++ L+ +E ++IE++ + R + ++ GRE G P+
Sbjct: 41 ERAAVTLRMRSDEILQEARKLRYLEN-QKIEKQRLARREEEEEGRENTEEDGEERPS 96
>SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05)
Length = 668
Score = 27.5 bits (58), Expect = 4.0
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 26 EQTGIEIDIDFNERLRDVDPLKAIERLEQIER-ETIQRLD 64
E GI + + +E L+D IER+++IER + I R+D
Sbjct: 615 ETLGIREENEVHESLKDGIVFTVIERIDRIERIDRIDRID 654
>SB_30536| Best HMM Match : fn3 (HMM E-Value=0.079)
Length = 754
Score = 27.5 bits (58), Expect = 4.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 64 DHDQNGRELNNATGVNLPNAAASFASCTMSLLEECELWRAEREPEPNNVLSFEEFSP 120
D + +++ +A P A S A+ ECEL R E E + + +LS + SP
Sbjct: 554 DFEDYAQQMLHAFASATPRPAQSLATPYPCPAMECELCRLESEMDVSAILSRSDDSP 610
>SB_2798| Best HMM Match : DNA_pol_B_2 (HMM E-Value=7.9e-10)
Length = 1378
Score = 27.5 bits (58), Expect = 4.0
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 39 RLRDVDPLKAIERLEQIERETIQRLDHDQNGRELNNATGVNLPNAAA 85
R DV LKA++ L+ +ER + H NG E+ A + + AA
Sbjct: 801 RGHDVQSLKALQWLKYLERRDGVCIQHAGNGGEVRLAGRIKVDGYAA 847
>SB_45111| Best HMM Match : rve (HMM E-Value=1.2e-24)
Length = 1575
Score = 27.1 bits (57), Expect = 5.2
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 23 KFKEQTGIEIDIDFNERLRDVDPLKAIERLEQIERETIQRLDHDQNGRELNNATGVNLPN 82
KF E+ I + R DV LKA++ L+ +ER + H NG E+ A + +
Sbjct: 709 KFLEEGKIGLVPLRGYRGHDVQSLKALQWLKYLERRDGVCIRHAGNGGEVRLAGRIKVDG 768
Query: 83 AAA 85
AA
Sbjct: 769 YAA 771
>SB_31407| Best HMM Match : TolA (HMM E-Value=2.5)
Length = 315
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 4 ASRAIAAEIPRAPCLEDWMKFKEQTGIEIDIDFNERLRDVDPLKAIERLEQI 55
A+ A P + + K + G+EI + R+ DV ER+EQ+
Sbjct: 32 AAEAAETSAPDRKTIREAKKMNREKGMEIQSAYKSRVNDVVSTFREERIEQM 83
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 26.6 bits (56), Expect = 6.9
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 18 LEDWMKFKEQTGIEIDIDFNERLRDVDPLKAIERLEQIERETIQRLDHD---QNGRE 71
LED ++ Q + D +R ++D K E+ +++ERE HD + GRE
Sbjct: 403 LEDALRLVSQNFDQYMQDLRKRAEELDREKEKEKEKELERERELERKHDLGPERGRE 459
>SB_43805| Best HMM Match : YscO (HMM E-Value=6)
Length = 243
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 4 ASRAIAAEIPRAPCLEDWMKFKEQTGIEIDIDFNERLRDVDPLKAIERLEQI 55
A+ A P + + K + G+EI + R+ DV ER+EQ+
Sbjct: 32 AAEAAETSAPDRKTIREAKKMNREKGMEIQSAYKSRVNDVVSTFREERIEQM 83
>SB_47522| Best HMM Match : HLH (HMM E-Value=1e-17)
Length = 213
Score = 26.2 bits (55), Expect = 9.1
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 62 RLDHDQNGRELNNATGVNLPNAAASFASCTMSLLEECELWRAEREPEPNNVLSFEE 117
RLD Q + + N+P S S + E+ + AE++ +P+++L+ EE
Sbjct: 149 RLDDTQELNSPSGDSSSNIPTDNESEGSPESFIFEQGLWYLAEQDDDPDSLLNVEE 204
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 26.2 bits (55), Expect = 9.1
Identities = 15/72 (20%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 31 EIDIDFNERLRDVDPLK-AIERLEQIERETIQRLDHDQNGRELNNATGVNLPNAAASFAS 89
E+ + + R++D + + AIE+L+ R + ++H + + +N+ L + F++
Sbjct: 1068 EVSREGSTRMKDANSQENAIEKLQNDNRYLEREIEHLKKELDSSNSVTEALEDQKQEFSN 1127
Query: 90 CTMSLLEECELW 101
+ +E+ E W
Sbjct: 1128 ELRNAMEKVEEW 1139
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.130 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,571,106
Number of Sequences: 59808
Number of extensions: 168289
Number of successful extensions: 321
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 308
Number of HSP's gapped (non-prelim): 17
length of query: 134
length of database: 16,821,457
effective HSP length: 75
effective length of query: 59
effective length of database: 12,335,857
effective search space: 727815563
effective search space used: 727815563
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 55 (26.2 bits)
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