GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001017-TA|BGIBMGA001017-PA|undefined
         (134 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    25   1.1  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    23   2.6  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            23   2.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    22   8.1  

>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 4/35 (11%)

Query: 52  LEQIERETIQRLDHDQNGREL-NNATGVNLPNAAA 85
           LEQ+ER    +  HDQ GREL NN   V   N  A
Sbjct: 238 LEQVERF---KAIHDQTGRELVNNFRSVQPLNTRA 269


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 15/55 (27%), Positives = 25/55 (45%)

Query: 8   IAAEIPRAPCLEDWMKFKEQTGIEIDIDFNERLRDVDPLKAIERLEQIERETIQR 62
           +  ++PRA       +++EQ    ++    +R  + D  K  E   QIERE   R
Sbjct: 98  VELDVPRAERATLKQQYEEQHRKRLEQQSKQRAIEKDRKKKDEIHRQIERERADR 152


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 15/55 (27%), Positives = 25/55 (45%)

Query: 8   IAAEIPRAPCLEDWMKFKEQTGIEIDIDFNERLRDVDPLKAIERLEQIERETIQR 62
           +  ++PRA       +++EQ    ++    +R  + D  K  E   QIERE   R
Sbjct: 98  VELDVPRAERATLKQQYEEQHRKRLEQQSKQRAIEKDRKKKDEIHRQIERERADR 152


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 3   EASRAIAAEIPRAPCLEDWMK 23
           EASRA+     RA  LE W +
Sbjct: 862 EASRAVIRREERAVTLEVWQR 882


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.130    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,695
Number of Sequences: 2123
Number of extensions: 5255
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 4
length of query: 134
length of database: 516,269
effective HSP length: 58
effective length of query: 76
effective length of database: 393,135
effective search space: 29878260
effective search space used: 29878260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 44 (21.8 bits)