Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001017-TA|BGIBMGA001017-PA|undefined
(134 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator... 30 2.2
D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator... 30 2.2
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 30 2.2
AC006127-2|AAC97987.1| 661|Homo sapiens SN24_HUMAN protein. 30 2.2
AC006127-1|AAC97986.1| 628|Homo sapiens BRG-1-HUMAN [AA 812-14... 30 2.2
AY185210-1|AAO22066.1| 1308|Homo sapiens EVC2 protein. 30 2.9
AY152403-1|AAN86578.1| 1166|Homo sapiens EVC2 protein variant pr... 30 2.9
AY152402-1|AAN86577.1| 1228|Homo sapiens EVC2 protein protein. 30 2.9
AC114738-1|AAY41034.1| 1072|Homo sapiens unknown protein. 30 2.9
AB083067-1|BAC06590.1| 1228|Homo sapiens limbin protein. 30 2.9
U71075-1|AAC51938.1| 1439|Homo sapiens protein tyrosine phosphat... 29 5.1
BC014987-1|AAH14987.1| 771|Homo sapiens UTP14, U3 small nucleol... 28 8.9
BC009649-1|AAH09649.1| 771|Homo sapiens UTP14, U3 small nucleol... 28 8.9
BC001149-1|AAH01149.1| 771|Homo sapiens UTP14, U3 small nucleol... 28 8.9
AL034405-6|CAI42909.1| 320|Homo sapiens UTP14, U3 small nucleol... 28 8.9
AL034405-5|CAI42908.1| 771|Homo sapiens UTP14, U3 small nucleol... 28 8.9
>U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator
protein.
Length = 1647
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 10 AEIPRAPCLEDWMK-FKEQTGIEIDIDFNERLRDVDPLKAIER--LEQIERETIQRLDHD 66
AE+ R C E+ K F + ++D+++ L + LKAIE LE+IE E Q+
Sbjct: 1352 AEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSR 1411
Query: 67 QNGRE 71
+ R+
Sbjct: 1412 KRKRD 1416
>D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator
hSNF2b protein.
Length = 1647
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 10 AEIPRAPCLEDWMK-FKEQTGIEIDIDFNERLRDVDPLKAIER--LEQIERETIQRLDHD 66
AE+ R C E+ K F + ++D+++ L + LKAIE LE+IE E Q+
Sbjct: 1352 AEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSR 1411
Query: 67 QNGRE 71
+ R+
Sbjct: 1412 KRKRD 1416
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 10 AEIPRAPCLEDWMK-FKEQTGIEIDIDFNERLRDVDPLKAIER--LEQIERETIQRLDHD 66
AE+ R C E+ K F + ++D+++ L + LKAIE LE+IE E Q+
Sbjct: 1352 AEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSR 1411
Query: 67 QNGRE 71
+ R+
Sbjct: 1412 KRKRD 1416
>AC006127-2|AAC97987.1| 661|Homo sapiens SN24_HUMAN protein.
Length = 661
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 10 AEIPRAPCLEDWMK-FKEQTGIEIDIDFNERLRDVDPLKAIER--LEQIERETIQRLDHD 66
AE+ R C E+ K F + ++D+++ L + LKAIE LE+IE E Q+
Sbjct: 539 AEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSR 598
Query: 67 QNGRE 71
+ R+
Sbjct: 599 KRKRD 603
>AC006127-1|AAC97986.1| 628|Homo sapiens BRG-1-HUMAN [AA 812-1440]
protein.
Length = 628
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 10 AEIPRAPCLEDWMK-FKEQTGIEIDIDFNERLRDVDPLKAIER--LEQIERETIQRLDHD 66
AE+ R C E+ K F + ++D+++ L + LKAIE LE+IE E Q+
Sbjct: 506 AEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSR 565
Query: 67 QNGRE 71
+ R+
Sbjct: 566 KRKRD 570
>AY185210-1|AAO22066.1| 1308|Homo sapiens EVC2 protein.
Length = 1308
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 22 MKFKEQTGIEIDIDFNERLRDV----DPLKAIERLEQIERETIQRLDHD 66
+ F G+ D+ N+++ D+ DP ++ LE++E T+ R D D
Sbjct: 346 LPFTSADGVNEDLSLNDQMIDILSSEDPGSMLQALEELEIATLNRADAD 394
>AY152403-1|AAN86578.1| 1166|Homo sapiens EVC2 protein variant
protein.
Length = 1166
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 22 MKFKEQTGIEIDIDFNERLRDV----DPLKAIERLEQIERETIQRLDHD 66
+ F G+ D+ N+++ D+ DP ++ LE++E T+ R D D
Sbjct: 266 LPFTSADGVNEDLSLNDQMIDILSSEDPGSMLQALEELEIATLNRADAD 314
>AY152402-1|AAN86577.1| 1228|Homo sapiens EVC2 protein protein.
Length = 1228
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 22 MKFKEQTGIEIDIDFNERLRDV----DPLKAIERLEQIERETIQRLDHD 66
+ F G+ D+ N+++ D+ DP ++ LE++E T+ R D D
Sbjct: 266 LPFTSADGVNEDLSLNDQMIDILSSEDPGSMLQALEELEIATLNRADAD 314
>AC114738-1|AAY41034.1| 1072|Homo sapiens unknown protein.
Length = 1072
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 22 MKFKEQTGIEIDIDFNERLRDV----DPLKAIERLEQIERETIQRLDHD 66
+ F G+ D+ N+++ D+ DP ++ LE++E T+ R D D
Sbjct: 110 LPFTSADGVNEDLSLNDQMIDILSSEDPGSMLQALEELEIATLNRADAD 158
>AB083067-1|BAC06590.1| 1228|Homo sapiens limbin protein.
Length = 1228
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 22 MKFKEQTGIEIDIDFNERLRDV----DPLKAIERLEQIERETIQRLDHD 66
+ F G+ D+ N+++ D+ DP ++ LE++E T+ R D D
Sbjct: 266 LPFTSADGVNEDLSLNDQMIDILSSEDPGSMLQALEELEIATLNRADAD 314
>U71075-1|AAC51938.1| 1439|Homo sapiens protein tyrosine phosphatase
receptor omicron protein.
Length = 1439
Score = 29.1 bits (62), Expect = 5.1
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 16 PCLEDWMK-FKEQTGIEIDIDFNERLRDVDPLKAIERLEQIERETIQRLDHDQNGRELNN 74
PCL+ W + ++Q G+ ++++F D D + + R++ I RE + H Q L
Sbjct: 1282 PCLQYWPEPGRQQYGL-MEVEFMSGTADEDLVARVFRVQNISREGHLLVRHFQ---FLRW 1337
Query: 75 ATGVNLPNAAASFASCTMSLLEECELWRAE 104
+ + P++ +F + LL E + W+AE
Sbjct: 1338 SAYRDTPDSKKAF----LHLLAEVDKWQAE 1363
>BC014987-1|AAH14987.1| 771|Homo sapiens UTP14, U3 small nucleolar
ribonucleoprotein, homolog A (yeast) protein.
Length = 771
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 38 ERLRDVDPLKAIERLEQIERETIQR---LDHDQNGR 70
E+LR V+P A+E LE+IE+ + L H +G+
Sbjct: 269 EQLRKVNPAAALEELEKIEKARMMERMSLKHQNSGK 304
>BC009649-1|AAH09649.1| 771|Homo sapiens UTP14, U3 small nucleolar
ribonucleoprotein, homolog A (yeast) protein.
Length = 771
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 38 ERLRDVDPLKAIERLEQIERETIQR---LDHDQNGR 70
E+LR V+P A+E LE+IE+ + L H +G+
Sbjct: 269 EQLRKVNPAAALEELEKIEKARMMERMSLKHQNSGK 304
>BC001149-1|AAH01149.1| 771|Homo sapiens UTP14, U3 small nucleolar
ribonucleoprotein, homolog A (yeast) protein.
Length = 771
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 38 ERLRDVDPLKAIERLEQIERETIQR---LDHDQNGR 70
E+LR V+P A+E LE+IE+ + L H +G+
Sbjct: 269 EQLRKVNPAAALEELEKIEKARMMERMSLKHQNSGK 304
>AL034405-6|CAI42909.1| 320|Homo sapiens UTP14, U3 small nucleolar
ribonucleoprotein, homolog A (yeast) protein.
Length = 320
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 38 ERLRDVDPLKAIERLEQIERETIQR---LDHDQNGR 70
E+LR V+P A+E LE+IE+ + L H +G+
Sbjct: 101 EQLRKVNPAAALEELEKIEKARMMERMSLKHQNSGK 136
>AL034405-5|CAI42908.1| 771|Homo sapiens UTP14, U3 small nucleolar
ribonucleoprotein, homolog A (yeast) protein.
Length = 771
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 38 ERLRDVDPLKAIERLEQIERETIQR---LDHDQNGR 70
E+LR V+P A+E LE+IE+ + L H +G+
Sbjct: 269 EQLRKVNPAAALEELEKIEKARMMERMSLKHQNSGK 304
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.314 0.130 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,115,793
Number of Sequences: 224733
Number of extensions: 712926
Number of successful extensions: 1509
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1508
Number of HSP's gapped (non-prelim): 17
length of query: 134
length of database: 73,234,838
effective HSP length: 82
effective length of query: 52
effective length of database: 54,806,732
effective search space: 2849950064
effective search space used: 2849950064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 60 (28.3 bits)
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