Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001017-TA|BGIBMGA001017-PA|undefined
(134 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 31 0.21
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 31 0.21
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 31 0.21
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 29 1.5
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 1.5
U37429-14|AAN63415.1| 400|Caenorhabditis elegans Hypothetical p... 28 2.0
AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein. 28 2.0
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 2.6
AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstrea... 28 2.6
U97002-8|AAB52265.2| 166|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z82265-6|CAB05170.2| 537|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z54327-8|CAA91121.2| 451|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z66511-1|CAA91314.1| 537|Caenorhabditis elegans Hypothetical pr... 26 7.9
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1 protein.
Length = 1291
Score = 31.5 bits (68), Expect = 0.21
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 40 LRD-VDPLKAIERLEQ-IER-ETIQRLDHDQNGRELNNATGVNLPNAAASFA--SCTMSL 94
LRD +D L E E +ER ET+ R+ D ++ +P A S T SL
Sbjct: 1011 LRDAIDDLIECELDESFVERIETVSRMLQDAGVTPTSDKLLTEIPKGFARKKAWSMTNSL 1070
Query: 95 LEECELWRAEREPEPNNVLS 114
+E E W +ERE E +LS
Sbjct: 1071 AKEIEQWTSEREAENQKMLS 1090
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1 protein.
Length = 1291
Score = 31.5 bits (68), Expect = 0.21
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 40 LRD-VDPLKAIERLEQ-IER-ETIQRLDHDQNGRELNNATGVNLPNAAASFA--SCTMSL 94
LRD +D L E E +ER ET+ R+ D ++ +P A S T SL
Sbjct: 1011 LRDAIDDLIECELDESFVERIETVSRMLQDAGVTPTSDKLLTEIPKGFARKKAWSMTNSL 1070
Query: 95 LEECELWRAEREPEPNNVLS 114
+E E W +ERE E +LS
Sbjct: 1071 AKEIEQWTSEREAENQKMLS 1090
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expression
abnormal protein protein.
Length = 1291
Score = 31.5 bits (68), Expect = 0.21
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 40 LRD-VDPLKAIERLEQ-IER-ETIQRLDHDQNGRELNNATGVNLPNAAASFA--SCTMSL 94
LRD +D L E E +ER ET+ R+ D ++ +P A S T SL
Sbjct: 1011 LRDAIDDLIECELDESFVERIETVSRMLQDAGVTPTSDKLLTEIPKGFARKKAWSMTNSL 1070
Query: 95 LEECELWRAEREPEPNNVLS 114
+E E W +ERE E +LS
Sbjct: 1071 AKEIEQWTSEREAENQKMLS 1090
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 1 MEEASRAIAAEIPRAPCLEDWMKFKEQTGIEIDIDFNERLR-DVDPLKAIE-RLEQIERE 58
++ S IAA +P P E+ M + + +E +ID E++R + LK + RL+ +E E
Sbjct: 283 VKRLSAEIAASVPNIP--ENEMSKELRDALEREIDLREQMRFSEEDLKRTQIRLQDVENE 340
Query: 59 TIQRL 63
+ L
Sbjct: 341 NEELL 345
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 1 MEEASRAIAAEIPRAPCLEDWMKFKEQTGIEIDIDFNERLR-DVDPLKAIE-RLEQIERE 58
++ S IAA +P P E+ M + + +E +ID E++R + LK + RL+ +E E
Sbjct: 283 VKRLSAEIAASVPNIP--ENEMSKELRDALEREIDLREQMRFSEEDLKRTQIRLQDVENE 340
Query: 59 TIQRL 63
+ L
Sbjct: 341 NEELL 345
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 1 MEEASRAIAAEIPRAPCLEDWMKFKEQTGIEIDIDFNERLR-DVDPLKAIE-RLEQIERE 58
++ S IAA +P P E+ M + + +E +ID E++R + LK + RL+ +E E
Sbjct: 283 VKRLSAEIAASVPNIP--ENEMSKELRDALEREIDLREQMRFSEEDLKRTQIRLQDVENE 340
Query: 59 TIQRL 63
+ L
Sbjct: 341 NEELL 345
>U37429-14|AAN63415.1| 400|Caenorhabditis elegans Hypothetical
protein F09E5.2 protein.
Length = 400
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 73 NNATGVNLPNAAASFASCTMSLLEECELWRAEREPEP---NNVLSFEEFS 119
NN TG + A +FA + L+++ E++R E P V +FE F+
Sbjct: 340 NNETGFLVDQTAEAFAEKMIDLMKDEEMYRRMSEEGPKWVQKVFAFEAFA 389
>AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein.
Length = 481
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 27 QTGIEIDIDFNERLRDVDPLKAIERLEQIERETIQRLDHDQNGR 70
Q +++D D + L +V K E QIE E +++ + + N R
Sbjct: 253 QANVKVDFDRSRHLSEVQIAKRAEERRQIETERLRQEEEELNIR 296
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/86 (18%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 49 IERLEQIERETIQRLDHDQNGRELNNATGVNLPNAAASFASCTMSLLEECELWRAEREPE 108
IE +E ++ + +++ +++ +EL N N A+ ++ ++ ++ R+ + +
Sbjct: 419 IEEIEHVQLKALRK-KYEKLTKELRNEEEEKF-NTRGKIATLRRTIEQDQKILRSMKATK 476
Query: 109 PNNVLSFEEFSPRNMTSRNHYESEFE 134
N+V F + +T +H S+F+
Sbjct: 477 KNDVNKFGPYMSEILTEIDHRSSQFK 502
>AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstream,
human gene xe7related protein 7 protein.
Length = 495
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 27 QTGIEIDIDFNERLRDVDPLKAIERLEQIERETIQRLDHDQN 68
Q +++D D + L +V K E QIE E +++ + + N
Sbjct: 253 QANVKVDFDRSRHLSEVQIAKRAEERRQIETERLRQEEEELN 294
>U97002-8|AAB52265.2| 166|Caenorhabditis elegans Hypothetical
protein K09H11.6 protein.
Length = 166
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 73 NNATGVNLPNAAASFASCTM-SLLEECELWRAEREPEPNNVLSFEEFSPRNM 123
NN T + + ASF ++ S + C LW E NN++ + S M
Sbjct: 15 NNGTALGVRIIGASFLCLSIISSVIACALWNTENHSLANNIIYYVGLSATQM 66
>Z82265-6|CAB05170.2| 537|Caenorhabditis elegans Hypothetical
protein F02H6.1 protein.
Length = 537
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 25 KEQTGIEIDIDFNERLRD-VDPLKAIERLEQIERETIQRLDHDQNGRELNNATGVNLPNA 83
+E GIE D+D ++ L D + + +E++ E+ +R D ++ + PNA
Sbjct: 450 QEGAGIETDVDVDDELEDEYSGSDSSQDVEEVPEESSERYVADTGSATNQPSSSTSEPNA 509
>Z54327-8|CAA91121.2| 451|Caenorhabditis elegans Hypothetical
protein C26D10.3 protein.
Length = 451
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 66 DQNGRELNNATGVNLPNAAASFASCTMSLLEECELWR 102
+ +G ++N+A +LPN A C ++ E LW+
Sbjct: 310 ENSGIKVNDACETSLPNVFACGDVCALTTTEPSTLWQ 346
>Z66511-1|CAA91314.1| 537|Caenorhabditis elegans Hypothetical
protein F07A11.1 protein.
Length = 537
Score = 26.2 bits (55), Expect = 7.9
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 2 EEASRAIAAEIPRAPCLEDWMKFKEQTGIEIDIDFNERLRD-VDPLKAIERLEQIER 57
EE R + RA ED + KE+T + + N+ LRD VD + A E +E +R
Sbjct: 207 EEERRKYEETMKRAKMYEDLTREKEETFKREEAERNKALRDHVDRVNA-EMIEMKKR 262
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.130 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,442,437
Number of Sequences: 27539
Number of extensions: 134338
Number of successful extensions: 407
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 398
Number of HSP's gapped (non-prelim): 14
length of query: 134
length of database: 12,573,161
effective HSP length: 74
effective length of query: 60
effective length of database: 10,535,275
effective search space: 632116500
effective search space used: 632116500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 55 (26.2 bits)
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