GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001016-TA|BGIBMGA001016-PA|undefined
         (154 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   4.3  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    23   5.7  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 74  RIVIPRELTLIELLKQSSGVNSDEEVLRIREAKLR 108
           R V+  +      L+QSSG   + E  R R+ +LR
Sbjct: 146 RSVLELQTAANATLQQSSGQGGNRETARKRQQRLR 180


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 8/26 (30%), Positives = 17/26 (65%)

Query: 83  LIELLKQSSGVNSDEEVLRIREAKLR 108
           + E LKQ   ++ D + +++REA+ +
Sbjct: 264 IAEALKQQLEIDVDHKEIKVREARTK 289


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.325    0.142    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,433
Number of Sequences: 2123
Number of extensions: 2451
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 2
length of query: 154
length of database: 516,269
effective HSP length: 59
effective length of query: 95
effective length of database: 391,012
effective search space: 37146140
effective search space used: 37146140
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)